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Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
Fungal Diversity DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. Alternative fossil assignments resulted in very different time es- Caliciaceae is one of several ascomycete groups characterized timates and the comparison with the analysis based on a second- by producing prototunicate (thin-walled and evanescent) asci ary calibration demonstrates that the most likely placement of the and a mazaedium (an accumulation of loose, maturing spores fossil is close to a terminal node rather than a basal placement in covering the ascoma surface). -
Chaenotheca Chrysocephala Species Fact Sheet
SPECIES FACT SHEET Common Name: yellow-headed pin lichen Scientific Name: Chaenotheca chrysocephala (Turner ex Ach.) Th. Fr. Division: Ascomycota Class: Sordariomycetes Order: Trichosphaeriales Family: Coniocybaceae Technical Description: Crustose lichen. Photosynthetic partner Trebouxia. Thallus visible on substrate, made of fine grains or small lumps or continuous, greenish yellow. Sometimes thallus completely immersed and not visible on substrate. Spore-producing structure (apothecium) pin- like, comprised of a obovoid to broadly obconical head (capitulum) 0.2-0.3 mm diameter on a slender stalk, the stalk 0.6-1.3 mm tall and 0.04 -0.8 mm diameter; black or brownish black or brown with dense yellow colored powder on the upper part. Capitulum with fine chartreuse- yellow colored powder (pruina) on the under side. Upper side with a mass of powdery brown spores (mazaedium). Spore sacs (asci) cylindrical, 14-19 x 2.0-3.5 µm and disintegrating; spores arranged in one line in the asci (uniseriate), 1-celled, 6-9 x 4-5 µm, short ellipsoidal to globose with rough ornamentation of irregular cracks. Chemistry: all spot tests negative. Thallus and powder on stalk (pruina) contain vulpinic acid, which gives them the chartreuse-yellow color. This acid also colors Letharia spp., the wolf lichens. Other descriptions and illustrations: Nordic Lichen Flora 1999, Peterson (no date), Sharnoff (no date), Stridvall (no date), Tibell 1975. Distinctive Characters: (1) bright chartreuse-yellow thallus with yellow pruina under capitulum and on the upper part of the stalk, (2) spore mass brown, (3) spores unicellular (4) thallus of small yellow lumps. Similar species: Many other pin lichens look similar to Chaenotheca chrysocephala. -
Lichens in Old-Growth and Managed Mountain Spruce Forests in The
Biodiversity and Conservation (2019) 28:3497–3528 https://doi.org/10.1007/s10531-019-01834-4 ORIGINAL PAPER Lichens in old‑growth and managed mountain spruce forests in the Czech Republic: assessment of biodiversity, functional traits and bioindicators Jiří Malíček1 · Zdeněk Palice1 · Jan Vondrák1,2 · Martin Kostovčík3,4 · Veronika Lenzová5 · Jeňýk Hofmeister6,7 Received: 3 January 2019 / Revised: 5 August 2019 / Accepted: 13 August 2019 / Published online: 7 September 2019 © Springer Nature B.V. 2019 Abstract Natural spruce forests are restricted to the highest mountain ranges in the Czech Repub- lic. Spruce is also the commonest tree species in managed forests. Owing to a massive decline of spruce forests in Central Europe, caused by recent climatic fuctuations and dis- turbances, the lichen diversity and species composition was compared between ten repre- sentative natural mountain old-growth forests in the Czech Republic and their counterparts in mature managed forests. The old-growth forests are characterized by a higher species richness, abundance, number of Red-listed species, functional, taxonomic and phylogenetic diversities. Plots with the highest species richness are situated in the Šumava Mountains, an area with a relatively low sulphur deposition in the past. Bioindication analysis search- ing for lichen indicators supported several species (e.g. Xylographa vitiligo, Chaenotheca sphaerocephala) and genera (e.g. Calicium, Xylographa) with a strong preference for old- growth forests. Analysis of lichen functional traits revealed a higher abundance of spe- cies with a vegetative reproduction in managed forests that may be explained by a higher efciency in colonization by young successional stages. Lichens with stalked apothecia, pigmented ascospores and large ascospores are more frequent in old-growth forests. -
Bulletin of the California Lichen Society
Bulletin of the California Lichen Society Volume 22 No. 1 Summer 2015 Bulletin of the California Lichen Society Volume 22 No. 1 Summer 2015 Contents Beomyces rufus discovered in southern California .....................................................................................1 Kerry Knudsen & Jana Kocourková Acarospora strigata, the blue Utah lichen (blutah) ....................................................................................4 Bruce McCune California dreaming: Perspectives of a northeastern lichenologist ............................................................6 R. Troy McMullin Lichen diversity in Muir Woods National Monument ..............................................................................13 Rikke Reese Næsborg & Cameron Williams Additional sites of Umbilicaria hirsuta from Southwestern Oregon, and the associated lichenicolous fungus Arthonia circinata new to North America .....................................................................................19 John Villella & Steve Sheehy A new lichen field guide for eastern North America: A book review.........................................................23 Kerry Knudsen On wood: A monograph of Xylographa: A book review............................................................................24 Kerry Knudsen News and Notes..........................................................................................................................................26 Upcoming Events........................................................................................................................................30 -
Northwest Forest Plan
Standards and Guidelines for Management of Habitat for Late-Successional and Old-Growth Forest Related Species Within the Range of the Northern Spotted Owl Attachment A to the Record of Decision for Amendments to Forest Service and Bureau of Land Management Planning Documents Within the Range of the Northern Spotted Owl Standards and Guidelines for Management of Habitat for Late-Successional and Old-Growth Forest Related Species Within the Range of the Northern Spotted Owl Attachment A to the Record of Decision for Amendments to Forest Service and Bureau of Land Management Planning Documents Within the Range of the Northern Spotted Owl Outline All sections of this document, considered together, are the complete compilation of standards and guidelines. However, these standards and guidelines are broken down into the following sections for clarity and ease of reference. A. Introduction - This section includes introduction, purpose, definition of the planning area, relationship to existing agency plans, introduction to the various land allocation categories used elsewhere in these standards and guidelines, identification of appurtenant maps, and transition standards and guidelines. B. Basis for Standards and Guidelines - This section includes a background discussion of the objectives and considerations for managing for a network of terrestrial reserves. This section also contains the Aquatic Conservation Strategy, which includes discussions of the objectives and management emphases for Riparian Reserves, Key Watersheds, watershed analysis, and watershed restoration. C. Standards and Guidelines - This section includes specific standards and guidelines applicable to all land allocation categories. It also contains descriptions of, and standards and guidelines applicable to, all designated areas, matrix, and Key Watersheds. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
The Identity of Calicium Corynellum (Ach.) Ach
The Lichenologist (2020), 52, 333–335 doi:10.1017/S0024282920000250 Short Communication The identity of Calicium corynellum (Ach.) Ach. Maria Prieto1,3 , Ibai Olariaga1 , Sergio Pérez-Ortega2 and Mats Wedin3 1Department of Biology and Geology, Physics and Inorganic Chemistry, Rey Juan Carlos University, C/ Tulipán s/n, 28933, Móstoles, Madrid, Spain; 2Real Jardín Botánico (CSIC), C/ Claudio Moyano 1, 28014 Madrid, Spain and 3Department of Botany, Swedish Museum of Natural History, P.O. Box 50007, 10405, Stockholm, Sweden (Accepted 21 April 2020) Recently, Yahr (2015) studied British populations of Calicium corynellum (Ach.) Ach. to test whether these were distinct from C. viride Pers. As C. corynellum had the highest conservation priority in Britain, and was apparently declining rather dramatic- ally, it was important to clarify its taxonomic status. Yahr (2015) used both genetic (ITS rDNA) and morphological data from two British Calicium aff. corynellum populations and could not find differences with C. viride, suggesting that the British material represented saxicolous populations of the otherwise epiphytic or lignicolous C. viride. Although this study focused on British material, it introduced serious doubts about the identity and rela- tionships of these two species in other parts of the distribution area of C. corynellum. Interestingly, the British material that Yahr (2015) investigated was morphologically very similar to C. viride, but the latter was described as differing rather substantially from C. corynellum in other parts of its distribution area. Thus, C. corynellum differs from C. viride in its Fig. 1. Calicium corynellum habitus (M. Prieto C4 (ARAN-Fungi 8454)). Scale = 1 mm. In short-stalked, greyish white pruinose ascomata (C. -
Using Calicioid Lichens and Fungi As Biomonitors of Pollution in Five Class I Wilderness Areas in Eastern North America
Using Calicioid Lichens and Fungi as Biomonitors of Pollution in Five Class I Wilderness Areas in Eastern North America Steven B. Selva Professor Emeritus University of Maine at Fort Kent 23 University Drive, Fort Kent, ME 04743, U.S.A ABSTRACT: After evaluating the condition of mature, spore-bearing apothecia (and their inferred ability to produce viable spores) of calicioid lichens and fungi collected in each of five Class I Wilderness Areas in eastern North America, then comparing the results with an identical evaluation of mature, spore-bearing apothecia of calicioid lichens and fungi collected up to 27 years earlier in forests adjacent to or within 45-125 miles of these wilderness areas, it is clear that air pollution has considerably degraded, and likely reduced, the calicioid lichen flora in these wilderness areas. Fifty percent (50%) of the calicioid lichens collected in the Presidential Range-Dry River Wilderness Area in the White Mountain National Forest in New Hampshire, 75% of the calicioid lichens collected in Great Gulf Wilderness Area in the White Mountain National Forest, 50% of the calicioid lichens collected in the Lye Brook Wilderness Area in the Green Mountain National Forest in Vermont, 33% of the calicioid lichens collected in the Schoodic section of Acadia National Park on the coast of Maine, and 50% of the calicioid lichens collected in Great Smoky Mountain National Park in Tennessee and North Carolina are in poor to extremely poor condition. In comparison, 20 years earlier, 9% of the calicioid lichens collected at Gibbs Brook Research Natural Area and 11% of the calicioid lichens collected at Nancy Brook Research Natural Area, both in the White Mountain National Forest and adjacent to its two Wilderness Areas, were in poor to extremely poor condition. -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
http://www.diva-portal.org This is the published version of a paper published in Fungal diversity. Citation for the original published paper (version of record): Prieto, M., Wedin, M. (2016) Phylogeny, taxonomy and diversification events in the Caliciaceae.. Fungal diversity https://doi.org/10.1007/s13225-016-0372-y Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-2031 Fungal Diversity (2017) 82:221–238 DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 /Published online: 1 August 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. -
Catalogue of Lichenized and Lichenicolous Fungi of Morocco
Bocconea 6 - 1996 19 José M. Egea Catalogue of lichenized and lichenicolous fungi of Morocco Abstract Egea. J. M.: Catalogue of lichenized and lichenicolous fungi of Morocco. - Bocconea 6: 19- I 14. 1996. - ISSN I 120-4060. This checklist of lichens and lichenicolous fungi of Morocco. based on a criticai assessment of literature data. inc\udes 210 genera and 1100 infrageneric taxa, 1058 of which correspond to lichenized and 42 to lichenicolous fungi. The Rif, with 549 infrageneric taxa, and the NW CentraI Region, with 531 taxa, are the two parts of thc country with the highest number of known taxa. They are followed by CentraI Atlas (395), Gran Atlas (297), Anti Alias (267). SW Centrai Region (188) and SW Region (116). The High Plains (45) and the area cali ed Hammadas (23), are the two subdivisions with the lowest number of taxa. Introduction This first-approximation checklist oì' lichenized and lichenicolous fungi of Morocco has been compiled as a contribution to the project for a generaI checklist of Mediterranean countries, supported by the Commission for Lichens of OPTIMA. The catalogue includes 210 genera and 1100 infrageneric taxa, 1058 of which correspond to lichenized and 42 to lichenicolous fungi. More than half of the taxa (590) belong to 16 genera, the richest genera being Lecanora (88 taxa), Caloplaca (85 taxa), Verrucaria (44 taxa), Acarospora (38 taxa), Ramalina (35 taxa). The list of lichenized fungi also includes some non-Iichenized, lichenicolous species belonging to genera with a prevalence of lichenizcd species. The first lichen records from Morocco were published by Miiller Argoviensis (1879, 1883), who identified some material collected in 1875 by M. -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
Fungal Diversity (2017) 82:221–238 DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 /Published online: 1 August 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. Alternative fossil assignments resulted in very different time es- Caliciaceae is one of several ascomycete groups characterized timates and the comparison with the analysis based on a second- by producing prototunicate (thin-walled and evanescent) asci ary calibration demonstrates that the most likely placement of the and a mazaedium (an accumulation of loose, maturing spores fossil is close to a terminal node rather than a basal placement in covering the ascoma surface).