Using Calicioid Lichens and Fungi As Biomonitors of Pollution in Five Class I Wilderness Areas in Eastern North America
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Checklist of Calicioid Lichens and Fungi for Genera with Members in Temperate Western North America Draft: 2012-03-13
Draft: 2012-03-13 Checklist of Calicioids – E. B. Peterson Checklist of Calicioid Lichens and Fungi For Genera with Members in Temperate Western North America Draft: 2012-03-13 by E. B. Peterson Calicium abietinum, EBP#4640 1 Draft: 2012-03-13 Checklist of Calicioids – E. B. Peterson Genera Acroscyphus Lév. Brucea Rikkinen Calicium Pers. Chaenotheca Th. Fr. Chaenothecopsis Vainio Coniocybe Ach. = Chaenotheca "Cryptocalicium" – potentially undescribed genus; taxonomic placement is not known but there are resemblances both to Mycocaliciales and Onygenales Cybebe Tibell = Chaenotheca Cyphelium Ach. Microcalicium Vainio Mycocalicium Vainio Phaeocalicium A.F.W. Schmidt Sclerophora Chevall. Sphinctrina Fr. Stenocybe (Nyl.) Körber Texosporium Nádv. ex Tibell & Hofsten Thelomma A. Massal. Tholurna Norman Additional genera are primarily tropical, such as Pyrgillus, Tylophoron About the Species lists Names in bold are believed to be currently valid names. Old synonyms are indented and listed with the current name following (additional synonyms can be found in Esslinger (2011). Names in quotes are nicknames for undescribed species. Names given within tildes (~) are published, but may not be validly published. Underlined species are included in the checklist for North America north of Mexico (Esslinger 2011). Names are given with authorities and original citation date where possible, followed by a colon. Additional citations are given after the colon, followed by a series of abbreviations for states and regions where known. States and provinces use the standard two-letter abbreviation. Regions include: NAm = North America; WNA = western North America (west of the continental divide); Klam = Klamath Region (my home territory). For those not known from North America, continental distribution may be given: SAm = South America; EUR = Europe; ASIA = Asia; Afr = Africa; Aus = Australia. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
Fungal Diversity DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. Alternative fossil assignments resulted in very different time es- Caliciaceae is one of several ascomycete groups characterized timates and the comparison with the analysis based on a second- by producing prototunicate (thin-walled and evanescent) asci ary calibration demonstrates that the most likely placement of the and a mazaedium (an accumulation of loose, maturing spores fossil is close to a terminal node rather than a basal placement in covering the ascoma surface). -
Chaenotheca Chrysocephala Species Fact Sheet
SPECIES FACT SHEET Common Name: yellow-headed pin lichen Scientific Name: Chaenotheca chrysocephala (Turner ex Ach.) Th. Fr. Division: Ascomycota Class: Sordariomycetes Order: Trichosphaeriales Family: Coniocybaceae Technical Description: Crustose lichen. Photosynthetic partner Trebouxia. Thallus visible on substrate, made of fine grains or small lumps or continuous, greenish yellow. Sometimes thallus completely immersed and not visible on substrate. Spore-producing structure (apothecium) pin- like, comprised of a obovoid to broadly obconical head (capitulum) 0.2-0.3 mm diameter on a slender stalk, the stalk 0.6-1.3 mm tall and 0.04 -0.8 mm diameter; black or brownish black or brown with dense yellow colored powder on the upper part. Capitulum with fine chartreuse- yellow colored powder (pruina) on the under side. Upper side with a mass of powdery brown spores (mazaedium). Spore sacs (asci) cylindrical, 14-19 x 2.0-3.5 µm and disintegrating; spores arranged in one line in the asci (uniseriate), 1-celled, 6-9 x 4-5 µm, short ellipsoidal to globose with rough ornamentation of irregular cracks. Chemistry: all spot tests negative. Thallus and powder on stalk (pruina) contain vulpinic acid, which gives them the chartreuse-yellow color. This acid also colors Letharia spp., the wolf lichens. Other descriptions and illustrations: Nordic Lichen Flora 1999, Peterson (no date), Sharnoff (no date), Stridvall (no date), Tibell 1975. Distinctive Characters: (1) bright chartreuse-yellow thallus with yellow pruina under capitulum and on the upper part of the stalk, (2) spore mass brown, (3) spores unicellular (4) thallus of small yellow lumps. Similar species: Many other pin lichens look similar to Chaenotheca chrysocephala. -
Lichens in Old-Growth and Managed Mountain Spruce Forests in The
Biodiversity and Conservation (2019) 28:3497–3528 https://doi.org/10.1007/s10531-019-01834-4 ORIGINAL PAPER Lichens in old‑growth and managed mountain spruce forests in the Czech Republic: assessment of biodiversity, functional traits and bioindicators Jiří Malíček1 · Zdeněk Palice1 · Jan Vondrák1,2 · Martin Kostovčík3,4 · Veronika Lenzová5 · Jeňýk Hofmeister6,7 Received: 3 January 2019 / Revised: 5 August 2019 / Accepted: 13 August 2019 / Published online: 7 September 2019 © Springer Nature B.V. 2019 Abstract Natural spruce forests are restricted to the highest mountain ranges in the Czech Repub- lic. Spruce is also the commonest tree species in managed forests. Owing to a massive decline of spruce forests in Central Europe, caused by recent climatic fuctuations and dis- turbances, the lichen diversity and species composition was compared between ten repre- sentative natural mountain old-growth forests in the Czech Republic and their counterparts in mature managed forests. The old-growth forests are characterized by a higher species richness, abundance, number of Red-listed species, functional, taxonomic and phylogenetic diversities. Plots with the highest species richness are situated in the Šumava Mountains, an area with a relatively low sulphur deposition in the past. Bioindication analysis search- ing for lichen indicators supported several species (e.g. Xylographa vitiligo, Chaenotheca sphaerocephala) and genera (e.g. Calicium, Xylographa) with a strong preference for old- growth forests. Analysis of lichen functional traits revealed a higher abundance of spe- cies with a vegetative reproduction in managed forests that may be explained by a higher efciency in colonization by young successional stages. Lichens with stalked apothecia, pigmented ascospores and large ascospores are more frequent in old-growth forests. -
Morphological Variation and ITS Phylogeny of Chaenotheca Trichialis and C
Ann. Bot. Fennici 39: 73–80 ISSN 0003-455X Helsinki 8 March 2002 © Finnish Zoological and Botanical Publishing Board 2002 Morphological variation and ITS phylogeny of Chaenotheca trichialis and C. xyloxena (Coniocybaceae, lichenized ascomycetes) Leif Tibell Department of Systematic Botany, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18D, SE-752 36 Uppsala, Sweden Received 1 June 2001, accepted 19 October 2001 Tibell, L. 2002: Morphological variation and ITS phylogeny of Chaenotheca trichialis and C. xyloxena (Coniocybaceae, lichenized ascomycetes). — Ann. Bot. Fennici 39: 73–80. Chaenotheca trichialis and C. xyloxena have been characterized by differences in their morphology, anatomy and ecology. They are, however, often difficult to distinguish. In a molecular phylogeny based on ITS1-5.8S-ITS2 rDNA sequences the specimens of C. xyloxena but not those of C. trichialis formed a monophyletic group. To some extent the analysis also revealed regional groupings. Key words: Ascomycotina, classification, Coniocybaceae, Chaenotheca, ITS, phylog- eny, rDNA Introduction wood, have during the second half of the twenti- eth century been accepted as probably closely Several Chaenotheca species have wide distri- related but morphologically distinct species. butions, occur in a variety of niches, and are Chaenotheca trichialis was described by Achar- morphologically very plastic. Since the ecophe- ius already in 1808, and C. xyloxena was de- notypic variation is considerable and not easily scribed by Nádvorník in 1934. They were ac- understood, it is often difficult to identify speci- cepted as distinct species by, for example, To- mens, and species delimitation is often problem- bolewski (1966), Tibell (1980, 1987, 1999), atic. In some habitats, the species are very easily Puntillo (1994), Goward (1999), and Selva and recognised, but in others different species seem Tibell (1999). -
Bulletin of the California Lichen Society
Bulletin of the California Lichen Society Volume 22 No. 1 Summer 2015 Bulletin of the California Lichen Society Volume 22 No. 1 Summer 2015 Contents Beomyces rufus discovered in southern California .....................................................................................1 Kerry Knudsen & Jana Kocourková Acarospora strigata, the blue Utah lichen (blutah) ....................................................................................4 Bruce McCune California dreaming: Perspectives of a northeastern lichenologist ............................................................6 R. Troy McMullin Lichen diversity in Muir Woods National Monument ..............................................................................13 Rikke Reese Næsborg & Cameron Williams Additional sites of Umbilicaria hirsuta from Southwestern Oregon, and the associated lichenicolous fungus Arthonia circinata new to North America .....................................................................................19 John Villella & Steve Sheehy A new lichen field guide for eastern North America: A book review.........................................................23 Kerry Knudsen On wood: A monograph of Xylographa: A book review............................................................................24 Kerry Knudsen News and Notes..........................................................................................................................................26 Upcoming Events........................................................................................................................................30 -
Northwest Forest Plan
Standards and Guidelines for Management of Habitat for Late-Successional and Old-Growth Forest Related Species Within the Range of the Northern Spotted Owl Attachment A to the Record of Decision for Amendments to Forest Service and Bureau of Land Management Planning Documents Within the Range of the Northern Spotted Owl Standards and Guidelines for Management of Habitat for Late-Successional and Old-Growth Forest Related Species Within the Range of the Northern Spotted Owl Attachment A to the Record of Decision for Amendments to Forest Service and Bureau of Land Management Planning Documents Within the Range of the Northern Spotted Owl Outline All sections of this document, considered together, are the complete compilation of standards and guidelines. However, these standards and guidelines are broken down into the following sections for clarity and ease of reference. A. Introduction - This section includes introduction, purpose, definition of the planning area, relationship to existing agency plans, introduction to the various land allocation categories used elsewhere in these standards and guidelines, identification of appurtenant maps, and transition standards and guidelines. B. Basis for Standards and Guidelines - This section includes a background discussion of the objectives and considerations for managing for a network of terrestrial reserves. This section also contains the Aquatic Conservation Strategy, which includes discussions of the objectives and management emphases for Riparian Reserves, Key Watersheds, watershed analysis, and watershed restoration. C. Standards and Guidelines - This section includes specific standards and guidelines applicable to all land allocation categories. It also contains descriptions of, and standards and guidelines applicable to, all designated areas, matrix, and Key Watersheds. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
A Fossil Aspergillus from Baltic Amber
Mycol. Res. 109 (8): 956–960 (August 2005). f The British Mycological Society 956 doi:10.1017/S0953756205003497 Printed in the United Kingdom. A fossil Aspergillus from Baltic amber Heinrich DO¨RFELT1 and Alexander R. SCHMIDT2* 1 Martin-Luther-Universita¨t Halle, Institut fu¨r Geobotanik und Botanischer Garten, Neuwerk 21, D-06108 Halle/Saale, Germany. 2 Museum fu¨r Naturkunde, Humboldt-Universita¨t zu Berlin, Invalidenstr. 43, D-10115 Berlin, Germany. E-mail : [email protected] Received 17 May 2004; accepted 23 May 2005. A piece of Baltic amber (Tertiary, Eocene) contains an inclusion of a springtail (Collembola) which is overgrown by an Aspergillus species. The fossil fungus is described as A. collembolorum sp. nov. The excellent mode of preservation of the numerous conidiophores is remarkable and can be explained by sporulation in liquid resin. This is the second report of a fossil Aspergillus, the first being from Dominican amber. INTRODUCTION the insect was located close to the weathered surface. This allowed for microscopic investigation from both A springtail (Collembola), densely overgrown by the outer surface as well as in longitudinal-section. conidiophores of an Aspergillus species, was found in In order to protect the amber from oxidation and a piece of Baltic amber. The Baltic amber forests grew breakage the polished amber piece of 20 15 2mm during the Eocene epoch (50–35 Myr) in a temperate r r was embedded using polyester resin (GTS cured with to subtropical climate and consisted, apart from coni- addition of MEKP hardener Vosschemie, Uetersen) as fers, mainly of species in the Arecaceae and Fagaceae described by Hoffeins (2001). -
Species Fact Sheet
SPECIES FACT SHEET Common Name: Ambiguous pin Scientific Name: Chaenothecopsis pusilla Division: Ascomycota Class: Eurotiomycetes Order: Mycocaliciales Family: Mycocaliciaceae Taxonomic Note: Chaenothecopsis pusilla is a non-lichenized, free-living fungus that lacks a photosynthetic algal partner (photobiont, phycobiont). Although not a lichen, it and several similar fungi are usually included in treatments of pin lichens because they often occur in the same habitats and are difficult to differentiate in the field. Chaenothecopsis is poorly understood in the Pacific Northwest and a number of undescribed species are probably present. In its present form, C. pusilla is probably a complex of several different species (Goward 1999; Rikkinen 2003). Technical Description: Thalli tiny, crustose. Algal partner lacking. Thallus embedded in the substrate (immersed), often visible as an indistinct whitish stain. Spore-producing structure (apothecium) attached to decaying wood. Apothecia 0.4-1 (2) mm tall, comprised of a cup-shaped head (capitulum) on a slender cylindrical, usually unbranched stalk (stipe), the stipe smooth, brownish-black, shiny. The capitulum contains a brownish-black layer of persistent spore-producing asci (hymenium) forming a disc typical of most ascomycetes, lacking the powdery black spore mass (mazaedium) occurring in most other calicioids. Spores smooth, (4) 6-8 (9) x 2-3 µm, mostly two-celled but sometimes one-celled, or the dividing wall (septum) poorly defined. Chemistry: hymenium I+ blue (Thomson 1997); all spot tests negative (Goward 1999). Distinctive characters: (1) black, stalked apothecium with typical brownish hymenial disc, lacking the loose powdery spore mass of a mazaedium, (2) spores smooth, two-celled, (3) growing on decaying wood. -
Grzyby Babiej Góry
ISBN 978-83-64423-86-4 Grzyby Babiej Góry Babiej Grzyby Grzyby Babiej Góry Grzyby Babiej Góry 1 Grzyby Babiej Góry 2 Grzyby Babiej Góry Redaktorzy: Wiesław Mułenko Jan Holeksa 3 Grzyby Babiej Góry Grzyby Babiej Góry Redaktorzy: Wiesław Mułenko Jan Holeksa Recenzent: Prof. dr hab. Wiesław Mułenko Fotografia na okładce: Opieńka miodowa [Armillaria mellea (Vahl) P. Kumm. (s.l.)]. Fot. Marta Piasecka Redakcja techniczna: Maciej Mażul Reprodukcja dzieła w celach komercyjnych, w całości lub we fragmentach jest zabroniona bez pisemnej zgody posiadacza praw autorskich © by Babiogórski Park Narodowy, 2018 PL 34-222 Zawoja, Zawoja Barańcowa 1403 tel. +48 33 8775 110, +48 33 8776 702 fax. +48 33 8775 554 www: bgpn.pl Wrocław-Zawoja 2018 ISBN 978-83-64423-86-4 Wydawca: Grafpol Agnieszka Blicharz-Krupińska Projekt, opracowanie graficzne, skład, łamanie: Grafpol Agnieszka Blicharz-Krupińska ul. Czarnieckiego 1, 53-650 Wrocław, tel. +48 507 096 545 www.argrafpol.pl 4 Spis treści Przedmowa ................................................................................................................................................................7 Grzyby i ich rola w środowisku naturalnym. Wprowadzenie do znajomości grzybów Babiej Góry ......9 Fungi and their role in natural environment. Introduction to the knowledge of fungi at Babia Góra Mt. Monika Kozłowska, Małgorzata Ruszkiewicz-Michalska Mikroskopijne grzyby pasożytujące na roślinach, owadach i grzybach z Babiej Góry ..........................21 Microfungal parasites of plants, insects and fungi