Guideline on the Prevention, Detection and Remediation of Mould in Buildings
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Phylogeny and Nomenclature of the Genus Talaromyces and Taxa Accommodated in Penicillium Subgenus Biverticillium
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector available online at www.studiesinmycology.org StudieS in Mycology 70: 159–183. 2011. doi:10.3114/sim.2011.70.04 Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium R.A. Samson1, N. Yilmaz1,6, J. Houbraken1,6, H. Spierenburg1, K.A. Seifert2, S.W. Peterson3, J. Varga4 and J.C. Frisvad5 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Biodiversity (Mycology), Eastern Cereal and Oilseed Research Centre, Agriculture & Agri-Food Canada, 960 Carling Ave., Ottawa, Ontario, K1A 0C6, Canada, 3Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, 1815 N. University Street, Peoria, IL 61604, U.S.A., 4Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6726 Szeged, Közép fasor 52, Hungary, 5Department of Systems Biology, Building 221, Technical University of Denmark, DK-2800, Kgs. Lyngby, Denmark; 6Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. *Correspondence: R.A. Samson, [email protected] Abstract: The taxonomic history of anamorphic species attributed to Penicillium subgenus Biverticillium is reviewed, along with evidence supporting their relationship with teleomorphic species classified inTalaromyces. To supplement previous conclusions based on ITS, SSU and/or LSU sequencing that Talaromyces and subgenus Biverticillium comprise a monophyletic group that is distinct from Penicillium at the generic level, the phylogenetic relationships of these two groups with other genera of Trichocomaceae was further studied by sequencing a part of the RPB1 (RNA polymerase II largest subunit) gene. -
207-219 44(4) 01.홍승범R.Fm
한국균학회지 The Korean Journal of Mycology Review 일균일명 체계에 의한 국내 보고 Aspergillus, Penicillium, Talaromyces 속의 종 목록 정리 김현정 1† · 김정선 1† · 천규호 1 · 김대호 2 · 석순자 1 · 홍승범 1* 1국립농업과학원 농업미생물과 미생물은행(KACC), 2강원대학교 산림환경과학대학 산림환경보호학과 Species List of Aspergillus, Penicillium and Talaromyces in Korea, Based on ‘One Fungus One Name’ System 1† 1† 1 2 1 1 Hyeon-Jeong Kim , Jeong-Seon Kim , Kyu-Ho Cheon , Dae-Ho Kim , Soon-Ja Seok and Seung-Beom Hong * 1 Korean Agricultural Culture Collection, Agricultural Microbiology Division National Institute of Agricultural Science, Wanju 55365, Korea 2 Tree Pathology and Mycology Laboratory, Department of Forestry and Environmental Systems, Kangwon National University, Chun- cheon 24341, Korea ABSTRACT : Aspergillus, Penicillium, and their teleomorphic genera have a worldwide distribution and large economic impacts on human life. The names of species in the genera that have been reported in Korea are listed in this study. Fourteen species of Aspergillus, 4 of Eurotium, 8 of Neosartorya, 47 of Penicillium, and 5 of Talaromyces were included in the National List of Species of Korea, Ascomycota in 2015. Based on the taxonomic system of single name nomenclature on ICN (International Code of Nomenclature for algae, fungi, and plants), Aspergillus and its teleomorphic genera such as Neosartorya, Eurotium, and Emericella were named as Aspergillus and Penicillium, and its teleomorphic genera such as Eupenicillium and Talaromyces were named as Penicillium (subgenera Aspergilloides, Furcatum, and Penicillium) and Talaromyces (subgenus Biverticillium) in this study. In total, 77 species were added and the revised list contains 55 spp. of Aspergillus, 82 of Penicillium, and 18 of Talaromyces. -
Phylogeny and Nomenclature of the Genus Talaromyces and Taxa Accommodated in Penicillium Subgenus Biverticillium
available online at www.studiesinmycology.org StudieS in Mycology 70: 159–183. 2011. doi:10.3114/sim.2011.70.04 Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium R.A. Samson1, N. Yilmaz1,6, J. Houbraken1,6, H. Spierenburg1, K.A. Seifert2, S.W. Peterson3, J. Varga4 and J.C. Frisvad5 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Biodiversity (Mycology), Eastern Cereal and Oilseed Research Centre, Agriculture & Agri-Food Canada, 960 Carling Ave., Ottawa, Ontario, K1A 0C6, Canada, 3Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, 1815 N. University Street, Peoria, IL 61604, U.S.A., 4Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6726 Szeged, Közép fasor 52, Hungary, 5Department of Systems Biology, Building 221, Technical University of Denmark, DK-2800, Kgs. Lyngby, Denmark; 6Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. *Correspondence: R.A. Samson, [email protected] Abstract: The taxonomic history of anamorphic species attributed to Penicillium subgenus Biverticillium is reviewed, along with evidence supporting their relationship with teleomorphic species classified inTalaromyces. To supplement previous conclusions based on ITS, SSU and/or LSU sequencing that Talaromyces and subgenus Biverticillium comprise a monophyletic group that is distinct from Penicillium at the generic level, the phylogenetic relationships of these two groups with other genera of Trichocomaceae was further studied by sequencing a part of the RPB1 (RNA polymerase II largest subunit) gene. Talaromyces species and most species of Penicillium subgenus Biverticillium sensu Pitt reside in a monophyletic clade distant from species of other subgenera of Penicillium. -
What Is the Fungal Diversity of Marine Ecosystems in Europe?
mycologist 20 (2006) 15– 21 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycol What is the Fungal Diversity of Marine Ecosystems in Europe? Eleanor T. LANDY*, Gerwyn M. JONES School of Biomedical and Molecular Sciences, University of Surrey, Guildford, Surrey, GU2 7XH, UK abstract Keywords: Diversity In 2001 the European Register of Marine Species 1.0 was published (Costello et al. 2001 and Europe http://erms.biol.soton.ac.uk/, and latterly: http://www.marbef.org/data/stats.php) [Costello Fungi MJ, Emblow C, White R, 2001. European register of marine species: a check list of the marine Marine species in Europe and a bibliography of guides to their identification. Collection Patrimoines Naturels 50, 463p.]. The lists of species (from fungi to mammals) were published as part of a European Union Concerted action project (funded by the European Union Marine Science and Technology (MAST) research programme) and the updated version (ERMS 2) is EU- funded through the Marine Biodiversity and Ecosystem Functioning (MARBEF) Framework project 6 Network of Excellence. Among these lists, a list of the fungi isolated and identified from coastal and marine ecosystems in Europe was included (Clipson et al. 2001) [Clipson NJW, Landy ET, Otte ML, 2001. Fungi. In@ Costelloe MJ, Emblow C, White R (eds), European register of marine species: a check-list of the marine species in Europe and a bibliography of guides to their identification. Collection Patrimoines Naturels 50: 15–19.]. This article deals with the results of compiling a new taxonomically correct and complete list of all fungi that have been reported occurring in European marine waters. -
Talaromyces</I> Section <I>Islandici</I>, Using a Polyphasic Ap
Downloaded from orbit.dtu.dk on: Dec 22, 2018 Taxonomic re-evaluation of species in Talaromyces section Islandici, using a polyphasic approach Yilmaz, N.; Visagie, C. M.; Frisvad, Jens Christian; Houbraken, J.; Jacobs, K.; Samson, R. A. Published in: Persoonia Link to article, DOI: 10.3767/003158516X688270 Publication date: 2016 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Yilmaz, N., Visagie, C. M., Frisvad, J. C., Houbraken, J., Jacobs, K., & Samson, R. A. (2016). Taxonomic re- evaluation of species in Talaromyces section Islandici, using a polyphasic approach. Persoonia, 36, 37-56. DOI: 10.3767/003158516X688270 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Persoonia 36, 2016: 37–56 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158516X688270 Taxonomic re-evaluation of species in Talaromyces section Islandici, using a polyphasic approach N. -
Chromosome-Level Comprehensive Genome of Mangrove Sediment-Derived Fungus Penicillium Variabile HXQ-H-1
Journal of Fungi Article Chromosome-Level Comprehensive Genome of Mangrove Sediment-Derived Fungus Penicillium variabile HXQ-H-1 1, 1, 1 1 1 Ling Peng y, Liangwei Li y, Xiaochuan Liu , Jianwei Chen , Chengcheng Shi , Wenjie Guo 1, Qiwu Xu 1, Guangyi Fan 1,2, Xin Liu 1,2,* and Dehai Li 3,* 1 BGI-Qingdao, BGI-Shenzhen, Qingdao 266555, China; [email protected] (L.P.); [email protected] (L.L.); [email protected] (X.L.); [email protected] (J.C.); [email protected] (C.S.); [email protected] (W.G.); [email protected] (Q.X.); [email protected] (G.F.) 2 China National GeneBank, BGI-Shenzhen, Shenzhen 518120, China 3 Key Laboratory of Marine Drugs, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266100, China * Correspondence: [email protected] (X.L.); [email protected] (D.L.); Tel.: +86-532-5571-1134 (X.L.); +86-532-8203-1619 (D.L.) These authors contributed equally to this work. y Received: 18 November 2019; Accepted: 18 December 2019; Published: 23 December 2019 Abstract: Penicillium is an ascomycetous genus widely distributed in the natural environment and is one of the dominant fungi involved in the decomposition of mangroves, which can produce a variety of antitumor compounds and bioactive substances. However, in mangrove ecosystems there is no complete genome in this genus. In this study, we isolated a fungus strain named Penicillium variabile HXQ-H-1 from coast mangrove (Fujian Province, China). We generated a chromosome-level genome with total size of 33.32 Mb, scaffold N50 of 5.23 Mb and contig N50 of 96.74 kb. -
STUDIES on INDOOR FUNGI by James Alexander
STUDIES ON INDOOR FUNGI by James Alexander Scott A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy in Mycology, Graduate Department of Botany in the University of Toronto Copyright by James Alexander Scott, 2001 When I heard the learn’d astronomer, When the proofs, the figures, were ranged in columns before me, When I was shown the charts and diagrams, to add, divide, and measure them, When I sitting heard the astronomer where he lectured with much applause in the lecture-room, How soon unaccountable I became tired and sick, Till rising and gliding out I wander’d off by myself, In the mystical moist night-air, and from time to time, Look’d up in perfect silence at the stars. Walt Whitman, “Leaves of Grass”, 1855 STUDIES ON INDOOR FUNGI James Alexander Scott Department of Botany, University of Toronto 2001 ABSTRACT Fungi are among the most common microbiota in the interiors of buildings, including homes. Indoor fungal contaminants, such as dry-rot, have been known since antiquity and are important agents of structural decay, particularly in Europe. The principal agents of indoor fungal contamination in North America today, however, are anamorphic (asexual) fungi mostly belonging to the phyla Ascomycota and Zygomycota, commonly known as “moulds”. Broadloom dust taken from 369 houses in Wallaceburg, Ontario during winter, 1994, was serial dilution plated, yielding approximately 250 fungal taxa, over 90% of which were moulds. The ten most common taxa were: Alternaria alternata, Aureobasidium pullulans, Eurotium herbariorum, Aspergillus versicolor, Penicillium chrysogenum, Cladosporium cladosporioides, P. spinulosum, Cl. -
Microbiome-Driven Identification of Microbial Indicators for Postharvest
Kusstatscher et al. Microbiome (2019) 7:112 https://doi.org/10.1186/s40168-019-0728-0 RESEARCH Open Access Microbiome-driven identification of microbial indicators for postharvest diseases of sugar beets Peter Kusstatscher1,2, Christin Zachow1, Karsten Harms3, Johann Maier3, Herbert Eigner4, Gabriele Berg2 and Tomislav Cernava2,5* Abstract Background: Sugar loss due to storage rot has a substantial economic impact on the sugar industry. The gradual spread of saprophytic fungi such as Fusarium and Penicillium spp. during storage in beet clamps is an ongoing challenge for postharvest processing. Early detection of shifts in microbial communities in beet clamps is a promising approach for the initiation of targeted countermeasures during developing storage rot. In a combined approach, high-throughput sequencing of bacterial and fungal genetic markers was complemented with cultivation-dependent methods and provided detailed insights into microbial communities colonizing stored roots. These data were used to develop a multi-target qPCR technique for early detection of postharvest diseases. Results: The comparison of beet microbiomes from six clamps in Austria and Germany highlighted regional differences; nevertheless, universal indicators of the health status were identified. Apart from a significant decrease in microbial diversity in decaying sugar beets (p ≤ 0.01), a distinctive shift in the taxonomic composition of the overall microbiome was found. Fungal taxa such as Candida and Penicillium together with the gram-positive Lactobacillus were the main disease indicators in the microbiome of decaying sugar beets. In contrast, the genera Plectosphaerella and Vishniacozyma as well as a higher microbial diversity in general were found to reflect the microbiome of healthy beets. -
A Critical Review of Producers of Small Lactone Mycotoxins: Patulin, Penicillic Acid and Moniliformin
Wageningen Academic World Mycotoxin Journal, 2018; 11 (1): 73-100 Publishers SPECIAL ISSUE: 10 years World Mycotoxin Journal A critical review of producers of small lactone mycotoxins: patulin, penicillic acid and moniliformin J.C. Frisvad Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads Building 221, 2800 Kgs. Lyngby, Denmark; [email protected] Received: 19 december 2017 / Accepted: 26 January 2018 © 2018 Wageningen Academic Publishers OPEN ACCESS REVIEW ARTICLE Abstract A very large number of filamentous fungi has been reported to produce the small lactone mycotoxins patulin, penicillic acid and moniliformin. Among the 167 reported fungal producers of patulin, only production by 29 species could be confirmed. Patulin is produced by 3 Aspergillus species, 3 Paecilomyces species, 22 Penicillium species from 7 sections of Penicillium, and one Xylaria species. Among 101 reported producers of penicillic acid, 48 species could produce this mycotoxin. Penicillic acid is produced by 23 species in section Aspergillus subgenus Circumdati section Circumdati, by Malbranchea aurantiaca and by 24 Penicillium species from 9 sections in Penicillium and one species that does not actually belong to Penicillium (P. megasporum). Among 40 reported producers of moniliformin, five species have been regarded as doubtful producers of this mycotoxin or are now regarded as taxonomic synonyms. Moniliformin is produced by 34 Fusarium species and one Penicillium species. All the accepted producers of patulin, penicillic acid and moniliformin were revised according to the new one fungus – one name nomenclatural system, and the most recently accepted taxonomy of the species. Keywords: patulin, penicillic acid, moniliformin, terrestric acid, Penicillium, Aspergillus, Fusarium 1. -
STUDIES on INDOOR FUNGI by James Alexander Scott a Thesis
STUDIES ON INDOOR FUNGI by James Alexander Scott A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy in Mycology, Graduate Department of Botany in the University of Toronto Copyright by James Alexander Scott, 2001 When I heard the learn’d astronomer, When the proofs, the figures, were ranged in columns before me, When I was shown the charts and diagrams, to add, divide, and measure them, When I sitting heard the astronomer where he lectured with much applause in the lecture-room, How soon unaccountable I became tired and sick, Till rising and gliding out I wander’d off by myself, In the mystical moist night-air, and from time to time, Look’d up in perfect silence at the stars. Walt Whitman, “Leaves of Grass”, 1855 STUDIES ON INDOOR FUNGI James Alexander Scott Department of Botany, University of Toronto 2001 ABSTRACT Fungi are among the most common microbiota in the interiors of buildings, including homes. Indoor fungal contaminants, such as dry-rot, have been known since antiquity and are important agents of structural decay, particularly in Europe. The principal agents of indoor fungal contamination in North America today, however, are anamorphic (asexual) fungi mostly belonging to the phyla Ascomycota and Zygomycota, commonly known as “moulds”. Broadloom dust taken from 369 houses in Wallaceburg, Ontario during winter, 1994, was serial dilution plated, yielding approximately 250 fungal taxa, over 90% of which were moulds. The ten most common taxa were: Alternaria alternata, Aureobasidium pullulans, Eurotium herbariorum, Aspergillus versicolor, Penicillium chrysogenum, Cladosporium cladosporioides, P. spinulosum, Cl. -
PORTADA Puente Biologico
ISSN1991-2986 RevistaCientíficadelaUniversidad AutónomadeChiriquíenPanamá Polyporus sp.attheQuetzalestrailintheVolcánBarúNationalPark,Panamá Volume1/2006 ChecklistofFungiinPanama elaboratedinthecontextoftheUniversityPartnership ofthe UNIVERSIDAD AUTÓNOMA DECHIRIQUÍ and J.W.GOETHE-UNIVERSITÄT FRANKFURT AMMAIN supportedbytheGerman AcademicExchangeService(DAAD) For this publication we received support by the following institutions: Universidad Autónoma de Chiriquí (UNACHI) J. W. Goethe-Universität Frankfurt am Main German Academic Exchange Service (DAAD) German Research Foundation (DFG) Deutsche Gesellschaft für Technische Zusammenarbeit (GTZ)1 German Federal Ministry for Economic Cooperation and Development (BMZ)2 Instituto de Investigaciones Científicas Avanzadas 3 y Servicios de Alta Tecnología (INDICASAT) 1 Deutsche Gesellschaft für Technische Zusammenarbeit (GTZ) GmbH Convention Project "Implementing the Biodiversity Convention" P.O. Box 5180, 65726 Eschborn, Germany Tel.: +49 (6196) 791359, Fax: +49 (6196) 79801359 http://www.gtz.de/biodiv 2 En el nombre del Ministerio Federal Alemán para la Cooperación Económica y el Desarollo (BMZ). Las opiniones vertidas en la presente publicación no necesariamente reflejan las del BMZ o de la GTZ. 3 INDICASAT, Ciudad del Saber, Clayton, Edificio 175. Panamá. Tel. (507) 3170012, Fax (507) 3171043 Editorial La Revista Natura fue fundada con el objetivo de dar a conocer las actividades de investigación de la Facultad de Ciencias Naturales y Exactas de la Universidad Autónoma de Chiriquí (UNACHI), pero COORDINADORADE EDICIÓN paulatinamente ha ampliado su ámbito geográfico, de allí que el Comité Editorial ha acordado cambiar el nombre de la revista al Clotilde Arrocha nuevo título:PUENTE BIOLÓGICO , para señalar así el inicio de una nueva serie que conserva el énfasis en temas científicos, que COMITÉ EDITORIAL trascienden al ámbito internacional. Puente Biológico se presenta a la comunidad científica Clotilde Arrocha internacional con este número especial, que brinda los resultados Pedro A.CaballeroR. -
Sequencing and Comparative Genomic Analysis of a Highly Metal-Tolerant Penicillium Janthinellum P1 Provide Insights Into Its Metal Tolerance
fmicb-12-663217 May 29, 2021 Time: 18:9 # 1 ORIGINAL RESEARCH published: 04 June 2021 doi: 10.3389/fmicb.2021.663217 Sequencing and Comparative Genomic Analysis of a Highly Metal-Tolerant Penicillium janthinellum P1 Provide Insights Into Its Metal Tolerance Bin-Bin Chi1,2, Ya-Nan Lu1,2, Ping-Chuan Yin1,2, Hong-Yan Liu1,2, Hui-Ying Chen1,2* and Yang Shan3 1 College of Chemistry and Bioengineering, Guilin University of Technology, Guilin, China, 2 Guangxi Key Laboratory of Electrochemical and Magneto-Chemical Functional Materials, College of Chemistry and Bioengineering, Guilin University of Technology, Guilin, China, 3 Hunan Agricultural Product Processing Institute, Hunan Academy of Agricultural Sciences, Edited by: Changsha, China Daniel Yero, Autonomous University of Barcelona, Spain Heavy metal pollution is a global knotty problem and fungi hold promising potential for Reviewed by: the remediation of wastewater containing heavy metals. Here, a new highly chromium- Li Xiong, tolerance species, Penicillium janthinellum P1, is investigated. The genome of P1 was Central China Normal University, China sequenced and assembled into 30 Mb genome size containing 10,955 predicted Renato Chavez, protein-coding genes with a GC content of 46.16% through an integrated method University of Santiago, Chile of Illumina short-read sequencing and single-molecule real-time Pacific Biosciences *Correspondence: sequencing platforms. Through a phylogenetic analysis with model species of fungi, Hui-Ying Chen [email protected] the evolutionary divergence time of Penicillium janthinellum P1 and Penicillium oxalicum 114-2 was estimated to be 74 MYA. 33 secondary metabolism gene clusters were Specialty section: This article was submitted to identified via antiSMASH software, mainly including non-ribosomal peptide synthase Evolutionary and Genomic genes and T1 polyketide synthase genes.