Production of the Sesquiterpene (+)-Valencene by Metabolically Engineered Corynebacterium Glutamicum
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												Retention Indices for Frequently Reported Compounds of Plant Essential Oils
Retention Indices for Frequently Reported Compounds of Plant Essential Oils V. I. Babushok,a) P. J. Linstrom, and I. G. Zenkevichb) National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA (Received 1 August 2011; accepted 27 September 2011; published online 29 November 2011) Gas chromatographic retention indices were evaluated for 505 frequently reported plant essential oil components using a large retention index database. Retention data are presented for three types of commonly used stationary phases: dimethyl silicone (nonpolar), dimethyl sili- cone with 5% phenyl groups (slightly polar), and polyethylene glycol (polar) stationary phases. The evaluations are based on the treatment of multiple measurements with the number of data records ranging from about 5 to 800 per compound. Data analysis was limited to temperature programmed conditions. The data reported include the average and median values of retention index with standard deviations and confidence intervals. VC 2011 by the U.S. Secretary of Commerce on behalf of the United States. All rights reserved. [doi:10.1063/1.3653552] Key words: essential oils; gas chromatography; Kova´ts indices; linear indices; retention indices; identification; flavor; olfaction. CONTENTS 1. Introduction The practical applications of plant essential oils are very 1. Introduction................................ 1 diverse. They are used for the production of food, drugs, per- fumes, aromatherapy, and many other applications.1–4 The 2. Retention Indices ........................... 2 need for identification of essential oil components ranges 3. Retention Data Presentation and Discussion . 2 from product quality control to basic research. The identifi- 4. Summary.................................. 45 cation of unknown compounds remains a complex problem, in spite of great progress made in analytical techniques over 5. - 
												
												Variation in the Composition of the Essential Oil of Valeriana Officinalis L
Proc. Estonian Acad. Sci. Chem., 2007, 56, 2, 67–74 Variation in the composition of the essential oil of Valeriana officinalis L. roots from Estonia Ain Raala, Anne Oravb*, Elmar Araka, Tiiu Kailasb, and Mati Müüriseppb a Institute of Pharmacy, University of Tartu, Nooruse 1, 50411 Tartu, Estonia b Institute of Chemistry, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia Received 31 January 2007, in revised form 12 March 2007 Abstract. The volatile constituents from roots of Valeriana officinalis L. were investigated using GC and GC/MS methods. Valerianae radix samples were obtained from retail pharmacies or cultivated in Estonia. The roots of five V. officinalis samples yielded 0.28–1.16% essential oil in the cut drug, which usually corresponded (four samples) to the European Pharmacopeia standard (0.3%). The basic oil components among the identified 84 compounds were isovaleric acid (0–2.1%), α-pinene (0.4–3.6%), α-fenchene (0.6–5.8%), camphene (0.6–5.9%), bornyl acetate (8.8–33.7%), myrtenyl acetate (2.0–7.2%), alloaromadendrene (0.3–7.6%), myrtenyl isovalerate (1.1–2.5%), spathulenol (0.7–4.1%), sesquiterpene alcohol (0.8–6.6%), valerianol (0.3–16.7%), valeranone (0.5–9.4%), and valerenal (tr–14.7%). Valerian root oil from Estonia (four samples) was rich in bornyl acetate and valerenal. Bornyl acetate, valerianol, and valeranone dominated in one Estonian sample. Key words: Valeriana officinalis L., essential oil, bornyl acetate, valerenal, valerianol, valeranone. INTRODUCTION Valerian (Valeriana officinalis L.) is a well-known and frequently used medicinal plant, which has a long proven history of efficacy. - 
												
												Sesquiterpenoids and Phenolics from Crepis Conyzifolia
Sesquiterpenoids and Phenolics from Crepis conyzifolia Wanda Kisiel* and Klaudia Michalska Department of Phytochemistry, Institute of Pharmacology, Polish Academy of Sciences, Pl-31-343 Krakow, Poland. Fax: +48 126374500. E-mail: [email protected] * Author for correspondence and reprint requests Z. Naturforsch. 56c, 961-964 (2001); received July 30/August 28, 2001 Crepis conyzifolia, Sesquiterpenoids, Phenolics From the roots of Crepis conyzifolia, two new and two known guaianolides were isolated together with three known phenylpropanoids. Structures of the new compounds were estab lished as 8ß-hydroxy-4ß, 15-dihydrozaluzanin C and 4ß, 15, llß, 13-tetrahydrozaluzanin C-3- O-ß-glucopyranoside by spectral methods. The identity of 8 -epiisolippidiol and dentalactone was also discussed. Introduction previously isolated from Crepis and Lactuca spe cies in our laboratory (Kisiel, 1983; Kisiel and Screening tests for potential anticancer agents Barszcz, 1995; Kisiel and Barszcz, 1997; Kisiel et from natural sources showed that crude alcoholic al., 2000). The identity of cichoriin (7) was estab extracts from plants belonging to the tribe Lactu- lished by comparison of its spectral data with those ceae of the Asteraceae exhibited chemoprotective in the literature (Kuwajima et al., 1992). The com effects on chemical carcinogenesis and differentia pound is reported for the first time from Crepis tion-inducing activities on human leukemia and species. Since no complete XH NMR data are mause melanoma cell lines. Some bioactive triter- available for 4 (Kisiel, 1983), we have included all pene and sesquiterpene lactone constituents of the our assignments in Table I, along with unreported plant extracts were isolated and identified (Taka- 13C NMR data in CDC13 and pyridine-d5. - 
												
												Stimulation of Deep Somatic Tissue with Capsaicin Produces Long-Lasting Mechanical Allodynia and Heat Hypoalgesia That Depends on Early Activation of the Camp Pathway
The Journal of Neuroscience, July 1, 2002, 22(13):5687–5693 Stimulation of Deep Somatic Tissue with Capsaicin Produces Long-Lasting Mechanical Allodynia and Heat Hypoalgesia that Depends on Early Activation of the cAMP Pathway K. A. Sluka Graduate Program in Physical Therapy and Rehabilitation Science, Neuroscience Graduate Program, Pain Research Program, University of Iowa, Iowa City, Iowa 52242 Pain and hyperalgesia from deep somatic tissue (i.e., muscle tissue was reversed by spinal blockade of adenylate cyclase or and joint) are processed differently from that from skin. This protein kinase A (PKA). Interestingly, mechanical allodynia was study examined differences between deep and cutaneous tis- reversed if adenylate cyclase or PKA inhibitors were adminis- sue allodynia and the role of cAMP in associated behavioral tered spinally 24 hr, but not 1 week, after injection of capsaicin. changes. Capsaicin was injected into the plantar aspect of the Spinally administered 8-bromo-cAMP resulted in a similar pat- skin, plantar muscles of the paw, or ankle joint, and responses tern, with heat hypoalgesia and mechanical allodynia occurring to mechanical and heat stimuli were assessed until allodynia simultaneously. Thus, injection of capsaicin into deep tissues resolved. Capsaicin injected into skin resulted in a secondary results in a longer-lasting mechanical allodynia and heat hy- mechanical allodynia and heat hypoalgesia lasting ϳ3hr.In poalgesia compared with injection of capsaicin into skin. The contrast, capsaicin injection into muscle or joint resulted in a mechanical allodynia depends on early activation of the cAMP long-lasting bilateral (1–4 weeks) mechanical allodynia with a pathway during the first 24 hr but is independent of the cAMP simultaneous unilateral heat hypoalgesia. - 
												
												Valencene Synthase Polypeptides, Encoding Nucleic Acid Molecules and Uses Thereof
(19) TZZ¥Z_T (11) EP 3 085 778 A1 (12) EUROPEAN PATENT APPLICATION (43) Date of publication: (51) Int Cl.: 26.10.2016 Bulletin 2016/43 C12N 9/88 (2006.01) C12P 5/00 (2006.01) C12N 15/60 (2006.01) C12N 5/10 (2006.01) (2006.01) (2006.01) (21) Application number: 16171175.9 C12N 15/82 C12P 7/26 (22) Date of filing: 11.03.2014 (84) Designated Contracting States: (72) Inventors: AL AT BE BG CH CY CZ DE DK EE ES FI FR GB • SARAN, Dayal GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO Lexington, KY (US) PL PT RO RS SE SI SK SM TR • PARK, Grace Eunyoung Lexington, KY (US) (30) Priority: 14.03.2013 US 201361852462 P (74) Representative: Rees, Kerry (62) Document number(s) of the earlier application(s) in WP Thompson accordance with Art. 76 EPC: 138 Fetter Lane 14718824.7 / 2 970 934 London EC4A 1BT (GB) (71) Applicant: Evolva, Inc. Wilmington, New Castle County, DE 19808 (US) (54) VALENCENE SYNTHASE POLYPEPTIDES, ENCODING NUCLEIC ACID MOLECULES AND USES THEREOF (57) The present invention is directed to a recom- thase polypeptide, or a catalytically active fragment binant cell that produces valencene and aristolochene, thereof. The presnt invention also provides methods of wherein the recombinant cell comprises a heterologous producing valencene and aristolochene using a recom- nucleic acid that encodes a valencene synthase polypep- binant cell of the invention and compositions comprising tide, or a catalytically active fragment thereof; or the re- valencene and aristolochene. - 
												
												Essential Oil Components of Alaska Cedar Heartwood Signature Redacted for Privacy
AN ABSTRACT OF THE THESIS OF Yeping Xiong for the degree of Master of Science in Forest Products presented on December 8, 2000. Title: Essential Oil Components of Alaska Cedar Heartwood Signature redacted for privacy. Abstract approved: 0 JosephVKarchesy C/7 The essential oil of Alaska cedar heartwood is known to contain compounds which contribute to the remarkable durability of this species. While previous research has identified several compounds, a complete description of this oil, which has a "burnt-grape fruit" odor, has not been undertaken. In this research a profile of the oil is given in which the major components are identified by GC-MS, isolation and spectroscopic techniques. The major components of the steam distilled essential oil were identified as nootkatin, nootkatone, valencene, nootaktene, carvacrol, methyl carvacrol, nootkatol, and eremophil- 1(10),11-dien-13-ol. In addition, it was found that the diethyl ether extract of the heartwood contained 1(10)- eremophilen-11,12-epoxide as a major component in addition to the compounds found in the steam distilled essential oil. 1(10)-Eremophilen-11,12-epoxide apparently does not survive the condition of steam distillation. Nootkatol, eremophil-1(10),11-dien-13-ol and 1(10)- eremophilen-11,12-epoxide have not been previously reported in Alaska cedar. Nootkatol is a known compound having been reported in other plants. However, eremophil-1(10),11-dien-13-ol and 1(10)-eremophilen- 11,12-epoxide represent new chemical structures to science being described here for the first time. Essential Oil Components of Alaska Cedar Heartwood by Yeping Xiong A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Master of Science Presented December 8, 2000 Commencement June, 2001 Master of Science thesis of Yeping Xiong presented on December 8, 2000 APPROVED: Signature redacted for privacy. - 
												
												Odor Impact of Volatiles Emitted from Marijuana, Cocaine, Heroin and Their Surrogate Scents Somchai Rice Iowa State University, [email protected]
Agricultural and Biosystems Engineering Agricultural and Biosystems Engineering Publications 12-2015 Odor impact of volatiles emitted from marijuana, cocaine, heroin and their surrogate scents Somchai Rice Iowa State University, [email protected] Jacek A. Koziel Iowa State University, [email protected] Follow this and additional works at: http://lib.dr.iastate.edu/abe_eng_pubs Part of the Agriculture Commons, Bioresource and Agricultural Engineering Commons, and the Toxicology Commons The ompc lete bibliographic information for this item can be found at http://lib.dr.iastate.edu/ abe_eng_pubs/707. For information on how to cite this item, please visit http://lib.dr.iastate.edu/ howtocite.html. This Article is brought to you for free and open access by the Agricultural and Biosystems Engineering at Iowa State University Digital Repository. It has been accepted for inclusion in Agricultural and Biosystems Engineering Publications by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Odor impact of volatiles emitted from marijuana, cocaine, heroin and their surrogate scents Abstract Volatile compounds emitted into headspace from illicit street drugs have been identified, but until now odor impact of these compounds have not been reported. Data in support of identification of these compounds and their odor impact to human nose are presented. In addition, data is reported on odor detection thresholds for canines highlighting differences with human ODTs and needs to address gaps in knowledge. New data presented here include: (1) compound identification, (2) gas chromatography (GC) column retention times, (3) mass spectral data, (4) odor descriptors from 2 databases, (5) human odor detection thresholds from 2 databases, (6) calculated odor activity values, and (7) subsequent ranking of compounds by concentration and ranking of compounds by odor impact (reported as calculated odor activity values). - 
												
												Sesquiterpene Glycosides from the Roots of Codonopsis Pilosula
Acta Pharmaceutica Sinica B 2016;6(1):46–54 Chinese Pharmaceutical Association Institute of Materia Medica, Chinese Academy of Medical Sciences Acta Pharmaceutica Sinica B www.elsevier.com/locate/apsb www.sciencedirect.com ORIGINAL ARTICLE Sesquiterpene glycosides from the roots of Codonopsis pilosula Yueping Jianga,b, Yufeng Liua, Qinglan Guoa, Chengbo Xua, Chenggen Zhua, Jiangong Shia,n aState Key Laboratory of Bioactive Substance and Function of Natural Medicines, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, China bDepartment of Pharmacy, Xiangya Hospital, Central South University, Changsha 410008, China Received 6 August 2015; received in revised form 10 September 2015; accepted 14 September 2015 KEYWORDS Abstract Three new sesquiterpene glycosides, named codonopsesquilosides AÀC(1À3), were isolated from an aqueous extract of the dried roots of Codonopsis pilosula. Their structures including absolute Codonopsis pilosula; fi Campanulaceae; con gurations were determined by spectroscopic and chemical methods. These glycosides are categorized Sesquiterpene glycoside; as C15 carotenoid (1), gymnomitrane (2), and eudesmane (3) types of sesquiterpenoids, respectively. Codonopsesquilosides Compound 1 is the first diglycoside of C15 carotenoids to be reported. Compound 2 represents the second AÀC; reported example of gymnomitrane-type sesquiterpenoids from higher plants. The absolute configurations C15 carotenoid; were supported by comparison of the experimental circular dichroism (CD) spectra with the calculated Gymnomitrane; electronic CD (ECD) spectra of 1À3, their aglycones, and model compounds based on quantum- Eudesmane mechanical time-dependent density functional theory. The influences of the glycosyls on the calculated ECD spectra of the glycosidic sesquiterpenoids, as well as some nomenclature and descriptive problems with gymnomitrane-type sesquiterpenoids are discussed. - 
												
												Exploring Plant Sesquiterpene Diversity by Generating Chemical Networks
processes Article Exploring Plant Sesquiterpene Diversity by Generating Chemical Networks Waldeyr M. C. da Silva 1,2,3,∗ , Jakob L. Andersen 4 , Maristela T. Holanda 5 , Maria Emília M. T. Walter 3 , Marcelo M. Brigido 2 , Peter F. Stadler 5,6,7,8,9 and Christoph Flamm 7 1 Federal Institute of Goiás, Rua 64, esq. c/ Rua 11, s/n, Expansão Parque Lago, Formosa, GO 73813-816, Brazil 2 Departamento de Biologia Celular, Universidade de Brasília, Brasília, DF 70910-900, Brazil; [email protected] 3 Bioinformatics Group, Department of Computer Science, Interdisciplinary Center for Bioinformatics, University of Leipzig, Härtelstraße 16-18, D-04107 Leipzig, Germany; [email protected] 4 Department of Mathematics and Computer Science, University of Southern Denmark, Campusvej 55, DK-5230 Odense, Denmark; [email protected] 5 Departamento de Ciência da Computação, Instituto de Ciências Exatas, Universidade de Brasília, Brasília, DF 70910-900, Brazil; [email protected] (M.T.H.); [email protected] (P.F.S.) 6 German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Competence Center for Scalable Data Services and Solutions Dresden-Leipzig, and Leipzig Research Center for Civilization Diseases, University of Leipzig, Härtelstraße 16-18, D-04107 Leipzig, Germany 7 Institute for Theoretical Chemistry, University of Vienna, Währingerstraße 17, A-1090 Wien, Austria; [email protected] 8 Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, D-04103 Leipzig, Germany 9 Santa Fe Institute, 1399 Hyde Park Rd., Santa Fe, NM 87501, USA * Correspondence: [email protected]; Tel.: +55-61-99671-6025 Received: 28 February 2019; Accepted: 11 April 2019; Published: 25 April 2019 Abstract: Plants produce a diverse portfolio of sesquiterpenes that are important in their response to herbivores and the interaction with other plants. - 
												
												Flavonoids and Terpenes • Analytical Standards for Terpenes and Flavonoid Analysis • Single-Element Standards and Mixes Available
cannstandards® Flavonoids and Terpenes • Analytical standards for terpenes and flavonoid analysis • Single-Element Standards and Mixes Available spexcertiprep.com Connect with us Phone: +1.732.549.7144 • +1.800.LAB.SPEX Spex CertiPrep is an Fax: +1.732.603.9647 Anatylia Scientific company [email protected] Find out more at antylia.com Flavonoids and Terpenes Flavonoids are naturally occurring secondary metabolic products which can have important functions within plants and benefit consumers with health and healing properties. Organic Certified Many beneficial compounds are metabolites produced as an end product Reference Materials of chemical and biological processes. Metabolites are small molecules that have many functions including defense, pigments, pheromones, odorants and catalysts. Primary metabolites are necessary for growth, development and reproduction. Flavonoids are secondary plant, algae or fungus metabolites composed of polyphenolic compounds. Secondary metabolites are not directly involved in critical processes but have secondary functions involving defense and pigmentation. We offer analytical standards for flavonoid analysis. Analytical Standards for Terpenes are the common term for a large group of compounds that contribute Flavonoid and Terpene Testing to flavor and smell of botanical products. Custom standards are also available. Contact us at 732.549.7144 or via email at [email protected] to discuss your specific requirements. Supplied with a Certificate of Analysis to 1702 ed 5 & it 1 d 7 re 0 c 3 c 4 A C er - 
												
												Callitropsis Nootkatensis)
FEBS Letters 588 (2014) 1001–1007 journal homepage: www.FEBSLetters.org Valencene oxidase CYP706M1 from Alaska cedar (Callitropsis nootkatensis) Katarina Cankar a,b, Adèle van Houwelingen b, Miriam Goedbloed a, Rokus Renirie c, René M. de Jong d, ⇑ Harro Bouwmeester a, Dirk Bosch b, Theo Sonke e, Jules Beekwilder b, a Laboratory of Plant Physiology, Wageningen University, Droevendaalsesteeg 1, 6708 PD Wageningen, The Netherlands b Plant Research International, Wageningen University and Research Centre, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands c Division of Molecular and Computational Toxicology, Free University of Amsterdam, De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands d DSM Biotechnology Center, Alexander Fleminglaan 1, 2613 AX Delft, The Netherlands e Isobionics, Urmonderbaan 22, 6167 RD Geleen, The Netherlands article info abstract Article history: (+)-Nootkatone is a natural sesquiterpene ketone used in grapefruit and citrus flavour compositions. Received 26 November 2013 It occurs in small amounts in grapefruit and is a major component of Alaska cedar (Callitropsis noot- Revised 21 January 2014 katensis) heartwood essential oil. Upon co-expression of candidate cytochrome P450 enzymes from Accepted 21 January 2014 Alaska cedar in yeast with a valencene synthase, a C. nootkatensis valencene oxidase (CnVO) was Available online 11 February 2014 identified to produce trans-nootkatol and (+)-nootkatone. Formation of (+)-nootkatone was Edited by Peter Brzezinski detected at 144 ± 10 lg/L yeast culture. CnVO belongs to a new subfamily of the CYP706 family of cytochrome P450 oxidases. Ó 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved. Keywords: Sesquiterpene Cytochrome P450 Alaska cedar (+)-Valencene (+)-Nootkatone Callitropsis nootkatensis 1. - 
												
												Identification of Sesquiterpene Synthases from the Basidiomycota Coniophora Puteana for the Efficient and Highly Selective Β-Co
Mischko et al. Microb Cell Fact (2018) 17:164 https://doi.org/10.1186/s12934-018-1010-z Microbial Cell Factories RESEARCH Open Access Identifcation of sesquiterpene synthases from the Basidiomycota Coniophora puteana for the efcient and highly selective β‑copaene and cubebol production in E. coli Wolfgang Mischko , Max Hirte , Monika Fuchs , Norbert Mehlmer and Thomas B. Brück* Abstract Background: Terpenes are an important and extremely versatile class of secondary metabolites that are commer- cially used in the pharmaceutical, food and cosmetics sectors. Genome mining of diferent fungal collections has revealed the genetic basis for a steadily increasing number of putative terpene synthases without any detailed knowl- edge about their biochemical properties. The analysis and research of this rich genetic source provides a precious basis for the advancing biotechnological production of an almost endless number of valuable natural metabolites. Results: Three annotated terpene synthases from the little investigated Basidiomycota Coniophora puteana were studied in this work. For biochemical characterization, the heterologous expression in E. coli was conducted leading to the identifcation of two sesquiterpene synthases capable of the highly selective generation of β-copaene and cubebol. These compounds are commercially used as food and favor additives. The new enzymes show the high- est reported product selectivity for their main compounds and therefore represent the frst exclusive synthases for β-copaene (62% product selectivity) and cubebol (75% product selectivity) generation. In combination with an opti- mized heterologous microbial production system, we obtained product titers of 215 mg/L β-copaene and 497 mg/L cubebol. Conclusion: The reported product selectivity and our generated terpene titers exceed all published biotechnological data regarding the production of β-copaene and cubebol.