231 PROTEIN-CARBOHYDRATE INTERACTION The
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Download Author Version (PDF)
Environmental Science: Nano CdS Nanoparticles in Soil Induce Metabolic Reprogramming in Broad Bean (Vicia faba L.) Roots and Leaves Journal: Environmental Science: Nano Manuscript ID EN-ART-08-2019-000933.R1 Article Type: Paper Page 1 of 36 Environmental Science: Nano 1 2 3 4 The rapid development of nanotechnology has raised concern regarding the 5 6 7 environmental toxicity of nanoparticles (NPs). However, little is known about the 8 9 molecular mechanisms underlying NP toxicity in plants. Understanding toxic 10 11 12 mechanisms in organisms at molecular level, especially in crop plants, is important for 13 14 their sustainable use and development. In this study, although none of the phenotypic 15 16 17 parameters of broad bean plants (photosynthetic pigments contents, biomass, and lipid 18 19 20 peroxidation) were overtly impacted in response to CdS-NPs in soil during 28 d of 21 22 exposure, metabolomics revealed marked and statistically significant alterations in the 23 24 25 metabolite profiles of plant roots and leaves. The reprogramming of antioxidant 26 27 metabolite production presumably reflected the molecular defense response of the 28 29 30 plants to CdS-NPs stress. The sensitive responses of flavone, putrescine and 31 32 33 noradrenaline in the leaves suggests the use of these compounds in legumes as 34 35 biomarkers of oxidative stress induced by the presence of CdS-NPs in soil. 36 37 38 Metabolomics might thus be a suitable approach for the early detection of soil 39 40 contamination by Cd. In the plants, the reprogramming of carbon and nitrogen 41 42 43 metabolism (including sugars, organic acids, amino acids, and N-containing 44 45 46 compounds) alleviated the toxicity of CdS-NPs, which may have been caused by free 47 48 Cd2+ ions or perhaps by a particle-specific response. -
And Honeydew Sugars with Respect to Their Utilization by the Hymenopteran Parasitoid Cotesia Glomerata F.L
Journal of Insect Physiology 47 (2001) 1077–1084 www.elsevier.com/locate/jinsphys A comparison of nectar- and honeydew sugars with respect to their utilization by the hymenopteran parasitoid Cotesia glomerata F.L. Wa¨ckers * Institute of Plant Sciences, Applied Entomology, Swiss Federal Institute of Technology (ETH), 8092 Zurich, Switzerland Received 10 October 2000; received in revised form 12 February 2001; accepted 19 February 2001 Abstract Fourteen naturally occurring sugars were individually tested with respect to their effect on Cotesia glomerata longevity. Parasitoids kept with solutions of either sucrose, glucose and fructose lived for Ͼ30 days. This constitutes a factor 15 increase in life span in comparison to control individuals kept with water only. Stachyose, mannose, melezitose, melibiose, maltose and erlose increased parasitoid longevity by a factor of 11.2–6.9. Solutions of galactose and trehalose had a marginal, but still significant effect. Lactose and raffinose did not raise parasitoid longevity, while rhamnose actually reduced parasitoid survival. In an additional experiment, the relationship between quantity of sugar consumption and longevity was established for all 14 sugars. To study the effect of an unsuitable sugar in sugar mixtures, a range of glucose:rhamnose mixtures was tested. Even at 20% of the sugar mixture rhamnose suppressed the nutritional benefit of the 80% glucose. The nutritional suitability of the sugars shows a positive correlation with the previously reported gustatory response towards the individual sugars. Patterns of sugar utilization are discussed with respect to hydrolytic enzymes and carbohydrate biochemical characteristics. Our findings for C. glomerata are compared to patterns of sugar utilization reported for other species. -
Electronic Supplementary Information
Electronic Supplementary Material (ESI) for Chemical Science. This journal is © The Royal Society of Chemistry 2019 Electronic Supplementary Information Poly(ionic liquid)s as a Distinct Receptor Material to Create Highly- Integrated Sensing Platform for Efficiently Identifying a Myriad of Saccharides Wanlin Zhang, Yao Li, Yun Liang, Ning Gao, Chengcheng Liu, Shiqiang Wang, Xianpeng Yin, and Guangtao Li* *Corresponding authors: Guangtao Li ([email protected]) S1 Contents 1. Experimental Section (Page S4-S6) Materials and Characterization (Page S4) Experimental Details (Page S4-S6) 2. Figures and Tables (Page S7-S40) Fig. S1 SEM image of silica colloidal crystal spheres and PIL inverse opal spheres. (Page S7) Fig. S2 Adsorption isotherm of PIL inverse opal. (Page S7) Fig. S3 Dynamic mechanical analysis and thermal gravimetric analysis of PIL materials. (Page S7) Fig. S4 Chemical structures of 23 saccharides. (Page S8) Fig. S5 The counteranion exchange of PIL photonic spheres from Br- to DCA. (Page S9) Fig. S6 Reflection and emission spectra of spheres for saccharides. (Page S9) Table S1 The jack-knifed classification on single-sphere array for 23 saccharides. (Page S10) Fig. S7 Lower detection concentration at 10 mM of the single-sphere array. (Page S11) Fig. S8 Lower detection concentration at 1 mM of the single-sphere array. (Page S12) Fig. S9 PIL sphere exhibiting great pH robustness within the biological pH range. (Page S12) Fig. S10 Exploring the tolerance of PIL spheres to different conditions. (Page S13) Fig. S11 Exploring the reusability of PIL spheres. (Page S14) Fig. S12 Responses of spheres to sugar alcohols. (Page S15) Fig. -
Sugars and Plant Innate Immunity
Journal of Experimental Botany Advance Access published May 2, 2012 Journal of Experimental Botany, Page 1 of 10 doi:10.1093/jxb/ers129 REVIEW PAPER Sugars and plant innate immunity Mohammad Reza Bolouri Moghaddam and Wim Van den Ende* KU Leuven, Laboratory of Molecular Plant Biology, Kasteelpark Arenberg 31, B-3001 Leuven, Belgium * To whom correspondence should be addressed. E-mail: [email protected] Received 27 January 2012; Revised 25 March 2012; Accepted 30 March 2012 Abstract Sugars are involved in many metabolic and signalling pathways in plants. Sugar signals may also contribute to Downloaded from immune responses against pathogens and probably function as priming molecules leading to pathogen-associated molecular patterns (PAMP)-triggered immunity and effector-triggered immunity in plants. These putative roles also depend greatly on coordinated relationships with hormones and the light status in an intricate network. Although evidence in favour of sugar-mediated plant immunity is accumulating, more in-depth fundamental research is required to unravel the sugar signalling pathways involved. This might pave the way for the use of biodegradable http://jxb.oxfordjournals.org/ sugar-(like) compounds to counteract plant diseases as cheaper and safer alternatives for toxic agrochemicals. Key words: immunity, pathogen, priming, signal, sugar. Introduction by guest on March 24, 2016 Sugars such as glucose, fructose, and sucrose are recognized Chisholm et al., 2006). Sugars are well known to activate as signalling molecules in plants (Rolland et al., 2006; various pattern recognition genes (Herbers et al., 1996a,b; Bolouri-Moghaddam et al., 2010), in addition to their Johnson and Ryan, 1990). -
Enhanced Trehalose Production Improves Growth of Escherichia Coli Under Osmotic Stress† J
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, July 2005, p. 3761–3769 Vol. 71, No. 7 0099-2240/05/$08.00ϩ0 doi:10.1128/AEM.71.7.3761–3769.2005 Copyright © 2005, American Society for Microbiology. All Rights Reserved. Enhanced Trehalose Production Improves Growth of Escherichia coli under Osmotic Stress† J. E. Purvis, L. P. Yomano, and L. O. Ingram* Department of Microbiology and Cell Science, Box 110700, University of Florida, Gainesville, Florida 32611 Downloaded from Received 7 July 2004/Accepted 9 January 2005 The biosynthesis of trehalose has been previously shown to serve as an important osmoprotectant and stress protectant in Escherichia coli. Our results indicate that overproduction of trehalose (integrated lacI-Ptac-otsBA) above the level produced by the native regulatory system can be used to increase the growth of E. coli in M9-2% glucose medium at 37°C to 41°C and to increase growth at 37°C in the presence of a variety of osmotic-stress agents (hexose sugars, inorganic salts, and pyruvate). Smaller improvements were noted with xylose and some fermentation products (ethanol and pyruvate). Based on these results, overproduction of trehalose may be a useful trait to include in biocatalysts engineered for commodity chemicals. http://aem.asm.org/ Bacteria have a remarkable capacity for adaptation to envi- and lignocellulose (6, 7, 10, 28, 30, 31, 32, 45). Biobased pro- ronmental stress (39). A part of this defense system involves duction of these renewable chemicals would be facilitated by the intracellular accumulation of protective compounds that improved growth under thermal stress and by increased toler- shield macromolecules and membranes from damage (9, 24). -
Conversion of Carbohydrates to Furfural Via Selective Cleavage Of
Electronic Supplementary Material (ESI) for Green Chemistry. This journal is © The Royal Society of Chemistry 2015 Conversion of carbohydrates to furfural via selective cleavage of carbon-carbon bond: cooperative effect of zeolite and solvent Jinglei Cui,ab Jingjing Tan,ab Tiansheng Deng,a Xiaojing Cui,a Yulei Zhu*ac and Yongwang Liac a State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, PR China. E-mail: [email protected]; Fax: +86-351-7560668. b University of Chinese Academy of Sciences, Beijing, 100049, PR China. c Synfuels China Co. Ltd., Beijing, PR China. 1. Materials Cellulose, inulin, starch, sucrose, maltose, D-glucose, D-fructose, D-xylose, D- arabinose, 5-hydromethylfurfural (HMF), formic acid (FA) and levulinic acid (LA) were purchased from Aladdin. γ-valerolactone (GVL), γ-butyrolactone (GBL), 1,4- dioxane, gluconic acid, H2SO4 (98%), Amberlyst-15, AlCl3 and γ-Al2O3 were purchased from Sinopharm Chemical Reagent Co., Ltd.. All the above agents were utilized without further purification. Hβ, HY, H-Mordenite and HZSM-5 zeolite were purchased from The Catalyst Plant of Nankai University. 2. Experiments 2.1 The computational formula The conversion of sugars and the yield of the products were quantified according to the following equations: 푚표푙 표푓 푠푢푔푎푟(푖푛푙푒푡)-푚표푙 표푓 푠푢푔푎푟(표푢푡푙푒푡) Conversion = 푚표푙 표푓 푠푢푔푎푟(푖푛푙푒푡) ×100% 푚표푙 표푓 표푛푒 푝푟표푑푢푐푡 푝푟표푑푢푐푒푑 Yield =푚표푙 표푓 푡ℎ푒표푟푒푡푖푐푎푙 푝푟표푑푢푐푡 푣푎푙푢푒×100% 2.2 Procedures for the catalyst recycling After the first run was completed, the reaction products were centrifuged for 10 min to separate the Hβ zeolite from the solutions. -
The Fischer Proof of the Structure of (+)-Glucose Started in 1888, 12
The Fischer proof of the structure of (+)-glucose Started in 1888, 12 years after the proposal that carbon was tetrahedral, and thus had stereoisomers. Tools: - melting points - optical rotation (determine whether a molecule is optically active) - chemical reactions Fischer knew: - (+)-glucose is an aldohexose. - Therefore, there are 4 stereocenters and 24 = 16 stereoisomers (8 D-sugars and 8 L-sugars) - At this time could not determine the actual configuration (D or L) of sugars - Fischer arbitrarily assigned D-glyceraldehyde the following structure. CHO H OH CH2OH - In 1951 Fischer was shown to have guessed correctly. CO2H CHO H OH HO H HO H CH2OH CO2H L-Tartaric acid L-glyceraldehyde Which of the 8 D-aldohexoses is (+)-glucose??? 1) Oxidation of (+)-glucose with nitric acid gives an aldaric acid, glucaric acid, that is optically active. Therefore (+)-glucose cannot have structures 1 or 7, which would give optically inactive aldaric acids. HNO3 (+)-glucose Glucaric acid Optically active CHO CO2H H OH H OH 1 H OH HNO3 H OH Mirror plane H OH H OH H OH H OH Since these aldaric CH2OH CO2H acids have mirror planes they are meso structures. CHO CO2H They are not optically H OH H OH active HO H HNO3 HO H 7 Mirror plane HO H HO H H OH H OH CH2OH CO2H 2) Ruff degradation of (+)-glucose gives (-)-arabinose. Oxidation of (-)-arabinose with nitric acid gives arabanaric acid, which is optically active. Therefore, (-)-arabinose cannot have structures 9 or 11, which would give optically inactive aldaric acids. If arabinose cannot be 9 or 11, (+)-glucose cannot be 2 (1 was already eliminated), 5 or 6, which would give 9 or 11 in a Ruff degradation. -
Sweetness and Sensory Properties of Commercial and Novel Oligosaccharides Of
1 Sweetness and sensory properties of commercial and novel oligosaccharides of 2 prebiotic potential 3 4 Laura Ruiz-Aceitunoa, Oswaldo Hernandez-Hernandeza, Sofia Kolidab, F. Javier 5 Morenoa,* and Lisa Methvenc 6 7 a Institute of Food Science Research, CIAL (CSIC-UAM), Nicolás Cabrera 9, 28049 8 Madrid (Spain) 9 b OptiBiotix Health plc, Innovation Centre, Innovation Way, Heslington, York YO10 10 5DG (UK) 11 c Sensory Science Centre, Department of Food and Nutritional Sciences, The University 12 of Reading, PO Box 226, Whiteknights, Reading RG6 6AP (UK) 13 14 *Corresponding author: [email protected] Tel (+34) 91 0017948 1 15 Abstract 16 This study investigates the sweetness properties and other sensory attributes of ten 17 commercial and four novel prebiotics (4-galactosyl-kojibiose, lactulosucrose, lactosyl- 18 oligofructosides and raffinosyl-oligofructosides) of high degree of purity and assesses the 19 influence of their chemical structure features on sweetness. The impact of the type of 20 glycosidic linkage by testing four sucrose isomers, as well as the monomer composition 21 and degree of polymerization on sweetness properties were determined. Data from the 22 sensory panel combined with principal component analysis (PCA) concludes that chain 23 length was the most relevant factor in determining the sweetness potential of a 24 carbohydrate. Thus, disaccharides had higher sweetness values than trisaccharides which, 25 in turn, exhibited superior sweetness than mixtures of oligosaccharides having DP above 26 3. Furthermore, a weak non-significant trend indicated that the presence of a ketose sugar 27 moiety led to higher sweetness. The novel prebiotics tested in this study had between 18 28 and 25% of relative sweetness, in line with other commercial prebiotics, and samples 29 varied in their extent of off flavour. -
Author Correction: the Planctomycete Stieleria Maiorica Mal15t Employs Stieleriacines to Alter the Species Composition in Marine Biofilms
https://doi.org/10.1038/s42003-020-01271-y OPEN Author Correction: The planctomycete Stieleria maiorica Mal15T employs stieleriacines to alter the species composition in marine biofilms Nicolai Kallscheuer , Olga Jeske, Birthe Sandargo, Christian Boedeker, Sandra Wiegand , Pascal Bartling, 1234567890():,; Mareike Jogler, Manfred Rohde, Jörn Petersen, Marnix H. Medema , Frank Surup & Christian Jogler Correction to: Communications Biology https://doi.org/10.1038/s42003-020-0993-2, published online 12 June 2020. In the original version of the Article “The planctomycete Stieleria maiorica Mal15T employs stieleriacines to alter the species composition in marine biofilms”, the authors described the new genus Stieleria and its type species Stieleria maiorica. However, the descriptions were not presented in the paper in the format required by Rule 27 and Rule 30 of the International Code of Nomenclature of Prokaryotes. Therefore, we here present the descriptions in the correct format. Description of Stieleria gen. nov. Stieleria (Stie.le’ri.a. N.L. fem. n. Stieleria named in honor of Anja Heuer, née Stieler, an extraordinary skilled German technician at the Leibniz Institute DSMZ, who played a key role in the cultivation of literally hundreds of novel planctomycetal strains). The round-to- pear-shaped cells with a smooth cell surface form rosettes or short chains. Cells reproduce by polar budding. In liquid culture, they produce an extracellular matrix that interconnects cells in aggregates. Daughter cells are motile, while mother cells are non-motile. The lifestyle is heterotrophic, obligatory aerobic, and mesophilic. The genus belongs to the phylum Planctomycetes, class Planctomycetia, order Pirellulales, and family Pirellulaceae. The type species is Stieleria maiorica. -
406-3 Wood Sugars.Pdf
Wood Chemistry Wood Chemistry Wood Carbohydrates l Major Components Wood Chemistry » Hexoses – D-Glucose, D-Galactose, D-Mannose PSE 406/Chem E 470 » Pentoses – D-Xylose, L-Arabinose Lecture 3 » Uronic Acids Wood Sugars – D-glucuronic Acid, D Galacturonic Acid l Minor Components » 2 Deoxy Sugars – L-Rhamnose, L-Fucose PSE 406 - Lecture 3 1 PSE 406 - Lecture 3 2 Wood Chemistry Wood Sugars: L Arabinose Wood Chemistry Wood Sugars: D Xylose l Pentose (5 carbons) CHO l Pentose CHO l Of the big 5 wood sugars, l Xylose is the major constituent of H OH arabinose is the only one xylans (a class of hemicelluloses). H OH found in the L form. » 3-8% of softwoods HO H HO H l Arabinose is a minor wood » 15-25% of hardwoods sugar (0.5-1.5% of wood). HO H H OH CH OH 2 CH2OH PSE 406 - Lecture 3 3 PSE 406 - Lecture 3 4 1 1 Wood Chemistry Wood Sugars: D Mannose Wood Chemistry Wood Sugars: D Glucose CHO l Hexose (6 carbons) CHO l Hexose (6 carbons) l Glucose is the by far the most H OH l Mannose is the major HO H constituent of Mannans (a abundant wood monosaccharide (cellulose). A small amount can HO H class of hemicelluloses). HO H also be found in the » 7-13% of softwoods hemicelluloses (glucomannans) H OH » 1-4% of hardwoods H OH H OH H OH CH2OH CH2OH PSE 406 - Lecture 3 5 PSE 406 - Lecture 3 6 Wood Chemistry Wood Sugars: D Galactose Wood Chemistry Wood Sugars CHO CHO l Hexose (6 carbons) CHO H OH H OH l Galactose is a minor wood D Xylose L Arabinose HO H HO H monosaccharide found in H OH HO H H OH certain hemicelluloses CH2OH HO H CHO CH2OH CHO CHO » 1-6% of softwoods HO H H OH H OH » 1-1.5% of hardwoods HO H HO H HO H HO H HO H H OH H OH H OH H OH H OH H OH CH2OH CH2OH CH2OH CH2OH D Mannose D Glucose D Galactose PSE 406 - Lecture 3 7 PSE 406 - Lecture 3 8 2 2 Wood Chemistry Sugar Numbering System Wood Chemistry Uronic Acids CHO 1 CHO l Aldoses are numbered l Uronic acids are with the structure drawn HO H 2 polyhydroxy carboxylic H OH vertically starting from the aldehydes. -
Determination of Carbohydrates in Honey Manali Aggrawal, Jingli Hu and Jeff Rohrer, Thermo Fisher Scientific, Sunnyvale, CA
Determination of carbohydrates in honey Manali Aggrawal, Jingli Hu and Jeff Rohrer, Thermo Fisher Scientific, Sunnyvale, CA ABSTRACT RESULTS SAMPLE ANALYSIS METHOD ACCURACY Table 7. Adulteration parameters for HS6 adulterated with 10% SS1 through SS5. Purpose: To develop an HPAE-PAD method for the determination of carbohydrates in honey Honey sugar analysis Sample Recovery HS6 (Wild Mountain Honey) samples to evaluate their quality and to assess the possibility of adulteration. Separation Adulteration Honey sugars were separated using a Dionex CarboPac PA210-Fast-4μm column (150 × 4 mm) in Method accuracy was evaluated by measuring recoveries of 10 sugar standards spiked into honey Parameters 100% + 10% + 10% + 10% + 10% + 10% For this study, we purchased 12 commercial honey samples (Table 1) and analyzed them using Honey SS1 SS2 SS3 SS4 SS5 Methods: Separation of individual honey sugars was achieved on the recently introduced Thermo series with a Dionex CarboPac PA210 guard column (50 × 4 mm). The column selectivity allow samples. For spiking experiments, four honey samples were used (HS7–HS10) and spiked with a 10- HPAE-PAD. Figure 3 shows the representative chromatograms of 3 honey samples. For all 12 Glucose(G), mg/L 121 115 116 117 119 107 Scientific™ Dionex™ CarboPac™ PA210-Fast-4μm column. Carbohydrate detection was by pulsed carbohydrates to be separated with only a hydroxide eluent generated using an eluent generator. A sugar standard mix at two concentration levels. Figure 4 shows the representative chromatograms investigated honey samples, fructose and glucose (Peak 2 and Peak 3), were found to be the major Fructose(F), mg/L 127 115 115 116 126 116 amperometric detection (PAD) with a gold working electrode and, therefore, no sample derivatization solution of honey sugar standards was prepared and an aliquot (10 μL) of the solution was injected of unspiked and spiked honey sample HS7. -
Multi-Enzymatic Cascades in the Synthesis of Modified Nucleosides
biomolecules Article Multi-Enzymatic Cascades in the Synthesis of Modified Nucleosides: Comparison of the Thermophilic and Mesophilic Pathways Ilja V. Fateev , Maria A. Kostromina, Yuliya A. Abramchik, Barbara Z. Eletskaya , Olga O. Mikheeva, Dmitry D. Lukoshin, Evgeniy A. Zayats , Maria Ya. Berzina, Elena V. Dorofeeva, Alexander S. Paramonov , Alexey L. Kayushin, Irina D. Konstantinova * and Roman S. Esipov Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry RAS, Miklukho-Maklaya 16/10, 117997 GSP, B-437 Moscow, Russia; [email protected] (I.V.F.); [email protected] (M.A.K.); [email protected] (Y.A.A.); [email protected] (B.Z.E.); [email protected] (O.O.M.); [email protected] (D.D.L.); [email protected] (E.A.Z.); [email protected] (M.Y.B.); [email protected] (E.V.D.); [email protected] (A.S.P.); [email protected] (A.L.K.); [email protected] (R.S.E.) * Correspondence: [email protected]; Tel.: +7-905-791-1719 ! Abstract: A comparative study of the possibilities of using ribokinase phosphopentomutase ! nucleoside phosphorylase cascades in the synthesis of modified nucleosides was carried out. Citation: Fateev, I.V.; Kostromina, Recombinant phosphopentomutase from Thermus thermophilus HB27 was obtained for the first time: M.A.; Abramchik, Y.A.; Eletskaya, a strain producing a soluble form of the enzyme was created, and a method for its isolation and B.Z.; Mikheeva, O.O.; Lukoshin, D.D.; chromatographic purification was developed. It was shown that cascade syntheses of modified nu- Zayats, E.A.; Berzina, M.Y..; cleosides can be carried out both by the mesophilic and thermophilic routes from D-pentoses: ribose, Dorofeeva, E.V.; Paramonov, A.S.; 2-deoxyribose, arabinose, xylose, and 2-deoxy-2-fluoroarabinose.