Kin Recognition in Vertebrates: What Do We Really Know About Adaptive Value?
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Relaxed Selection in the Wild
TREE-1109; No of Pages 10 Review Relaxed selection in the wild David C. Lahti1, Norman A. Johnson2, Beverly C. Ajie3, Sarah P. Otto4, Andrew P. Hendry5, Daniel T. Blumstein6, Richard G. Coss7, Kathleen Donohue8 and Susan A. Foster9 1 Department of Biology, University of Massachusetts, Amherst, MA 01003, USA 2 Department of Plant, Soil, and Insect Sciences, University of Massachusetts, Amherst, MA 01003, USA 3 Center for Population Biology, University of California, Davis, CA 95616, USA 4 Department of Zoology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada 5 Redpath Museum and Department of Biology, McGill University, Montreal, QC H3A 2K6, Canada 6 Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA 7 Department of Psychology, University of California, Davis, CA 95616, USA 8 Department of Biology, Duke University, Durham, NC 02138, USA 9 Department of Biology, Clark University, Worcester, MA 01610, USA Natural populations often experience the weakening or are often less clear than typical cases of trait evolution. removal of a source of selection that had been important When an environmental change results in strong selection in the maintenance of one or more traits. Here we refer to on a trait from a known source, a prediction for trait these situations as ‘relaxed selection,’ and review recent evolution often follows directly from this fact [2]. When studies that explore the effects of such changes on traits such a strong source of selection is removed, however, no in their ecological contexts. In a few systems, such as the clear prediction emerges. Rather, the likelihood of various loss of armor in stickleback, the genetic, developmental consequences can only be understood by integrating the and ecological bases of trait evolution are being discov- remaining sources of selection and processes at all levels of ered. -
Biological Sciences 1
Biological Sciences 1 Biological Sciences Marine Biology The Marine Biology major provides students with a strong foundation in basic biological concepts such as genetics, ecology, cell biology and marine systems as well as chemistry and mathematics. The plan of study provides the opportunity to choose elective courses from a wide variety of courses offered at Auburn University. In addition, students are required to take summer courses offered at marine labs around the United States, including Dauphin Island Sea Lab and Gulf Coast Research Lab. Students are also encouraged to consider internships and undergraduate research. Marine Biology graduates are well-prepared for advanced study in any marine science area or employment with marine labs, various governmental and nongovernmental agencies involved with coastal management and conservation, and tourism. Microbial, Cellular and Molecular Biology The Microbial, Cellular and Molecular Biology major provides students with an excellent foundation in the areas of microbiology, cellular and molecular biology that emphasizes the understanding of life at the cellular and molecular level. The choice of a formal option within the major allows students to concentrate on a particular area of interest. Each option provides a wide variety of courses and opportunities for undergraduate research. Students selecting the Microbiology option will be well prepared for postgraduate work or career advancement in a number of areas including food, environmental and medical microbiology. Students selecting the Cell and Molecular Biology option would also be well prepared for postgraduate study or career advancement in any area of eukaryotic cell or molecular biology. Both options provide excellent preparation for students interested in biotechnology or professional programs in the health sciences. -
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
Sirenian Feeding Apparatus: Functional Morphology of Feeding Involving Perioral Bristles and Associated Structures
THE SIRENIAN FEEDING APPARATUS: FUNCTIONAL MORPHOLOGY OF FEEDING INVOLVING PERIORAL BRISTLES AND ASSOCIATED STRUCTURES By CHRISTOPHER DOUGLAS MARSHALL A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNrVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REOUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 1997 DEDICATION to us simply as I dedicate this work to the memory of J. Rooker (known "Rooker") and to sirenian conservation. Rooker was a subject involved in the study during the 1993 sampling year at Lowry Park Zoological Gardens. Rooker died during the red tide event in May of 1996; approximately 140 other manatees also died. During his rehabilitation at Lowry Park Zoo, Rooker provided much information regarding the mechanism of manatee feeding and use of the perioral bristles. The "mortality incident" involving the red tide event in southwest Florida during the summer of 1996 should serve as a reminder that the Florida manatee population and the status of all sirenians is precarious. Although some estimates suggest that the Florida manatee population may be stable, annual mortality numbers as well as habitat degradation continue to increase. Sirenian conservation and research efforts must continue. ii ACKNOWLEDGMENTS Research involving Florida manatees required that I work with several different government agencies and private parks. The staff of the Sirenia Project, U.S. Geological Service, Biological Resources Division - Florida Caribbean Science Center has been most helpful in conducting the behavioral aspect of this research and allowed this work to occur under their permit (U.S. Fish and Wildlife Permit number PRT-791721). Numerous conversations regarding manatee biology with Dr. -
Assessing Symbiont Extinction Risk Using Cophylogenetic Data 2 3 Jorge Doña1 and Kevin P
1 Assessing symbiont extinction risk using cophylogenetic data 2 3 Jorge Doña1 and Kevin P. Johnson1 4 5 1. Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, 6 1816 S. Oak St., Champaign, IL 61820, USA 7 8 *Corresponding authors: Jorge Doña & Kevin Johnson; e-mail: [email protected] & [email protected] 9 10 Abstract: Symbionts have a unique mode of life that has attracted the attention of ecologists and 11 evolutionary biologists for centuries. As a result of this attention, these disciplines have produced 12 a mature body of literature on host-symbiont interactions. In contrast, the discipline of symbiont 13 conservation is still in a foundational stage. Here, we aim to integrate methodologies on symbiont 14 coevolutionary biology with the perspective of conservation. We focus on host-symbiont 15 cophylogenies, because they have been widely used to study symbiont diversification history and 16 contain information on symbiont extinction. However, cophylogenetic information has never been 17 used nor adapted to the perspective of conservation. Here, we propose a new statistic, 18 “cophylogenetic extinction rate” (Ec), based on coevolutionary knowledge, that uses data from 19 event-based cophylogenetic analyses, and which could be informative to assess relative symbiont 20 extinction risks. Finally, we propose potential future research to further develop estimation of 21 symbiont extinction risk from cophylogenetic analyses and continue the integration of this existing 22 knowledge of coevolutionary biology and cophylogenetics into future symbiont conservation 23 studies and practices. 24 25 Keywords: coevolution, coextinction risk, conservation biology, cophylogenies, host-symbiont 26 interactions, parasites. -
Kin Recognition in Social Insects and Other Animals-A Review of Recent Findings and a Consideration of Their Relevance for the Theory of Kin Selection
Proc. Indian Acad. Sci. (Anim. Sci.), Vol. 94, No. 6, December 1985, pp. 587-621. © Printed in India. Kin recognition in social insects and other animals-A review of recent findings and a consideration of their relevance for the theory of kin selection RAGHAVENDRA GADAGKAR Centre for Ecological Sciences, Indian Institute of Science, Bangalore 560012, India MS received 23 May 1985; revised 26 November 1985 Abstract. Kin selection is a widely invoked mechanism to explain the origin and evolution of social behaviour in animals. Proponents of the theory of kin selection place great emphasis on the correlation between asymmetries in genetic relatedness created by haplodiploidy and the multiple origins ofeusociality in the order Hymenoptera. The fact that a female is more closely related genetically to her full sister than to her daughters makes it more profitable for a Hymenopteran female, in terms of inclusive fitness,to raise full sisters rather than daughters or full siblings with a female biased sex ratio rather than offspring. This is sometimes referred to as the haplodiploidy hypothesis. In reality however, genetic relatedness between workers in social insect colonies and the reproductive brood they rear is far below ()75, the value expected for full sisters, often below (}5 the value expected between mother and daughter and, not uncommonly, approaching zero. Such values are on account of queen turnover, multiple mating by queens or polygyny. This situation raises doubts regarding the haplodiploidy hypothesis unless workers can discriminate between full and half sisters and preferentially direct their altruism towards their full sisters only. This would still mean an effective coefficient of genetic relatedness of(}75 between altruist and recipient. -
A Model for the Generation and Transmission of Variations in Evolution
A model for the generation and transmission of PNAS PLUS variations in evolution Olivier Rivoirea,b,1 and Stanislas Leiblerc,d aLaboratoire Interdisciplinaire de Physique, Université Grenoble Alpes, F-38000 Grenoble, France; bLaboratoire Interdisciplinaire de Physique, Centre National de la Recherche Scientifique, F-38000 Grenoble, France; cLaboratory of Living Matter, The Rockefeller University, New York, NY 10065; and dThe Simons Center for Systems Biology, Institute for Advanced Study, Princeton, NJ 08540 Edited by Joshua B. Plotkin, University of Pennsylvania, Philadelphia, PA, and accepted by the Editorial Board March 24, 2014 (received for review January 8, 2014) The inheritance of characteristics induced by the environment has Concurrent views, emphasizing the role of environmentally in- often been opposed to the theory of evolution by natural selection. duced variations in evolution, have had several insightful propo- However, although evolution by natural selection requires new nents (10–13), but were also endorsed by dubious yet influential heritable traits to be produced and transmitted, it does not pre- supporters (14). Examples of inherited acquired characteristics scribe, per se, the mechanisms by which this is operated. The have, however, been long known, from the transmission of culture in mechanisms of inheritance are not, however, unconstrained, be- humans to the uptake of extracellular DNA by bacteria. However, cause they are themselves subject to natural selection. We introduce only recently have we gained a fuller -
Kin Recognition and the Evolution of Altruism Aneil F
doi 10.1098/rspb.2001.1611 Kin recognition and the evolution of altruism Aneil F. Agrawal Department of Biology and Center for the Integrative Study of Animal Behavior, Indiana University, 1001 East 3rd Street, Bloomington, IN 47405-3700, USA ([email protected]) In 1964, Hamilton formalized the idea of kin selection to explain the evolution of altruistic behaviours. Since then, numerous examples from a diverse array of taxa have shown that seemingly altruistic actions towards close relatives are a common phenomenon. Although many species use kin recognition to direct altruistic behaviours preferentially towards relatives, this important aspect of social biology is less well understood theoretically. I extend Hamilton’s classic work by de¢ning the conditions for the evolution of kin-directed altruism when recognizers are permitted to make acceptance (type I) and rejection (type II) errors in the identi¢cation of social partners with respect to kinship. The e¡ect of errors in recognition on the evolution of kin-directed altruism depends on whether the population initially consists of uncondi- tional altruists or non-altruists (i.e. alternative forms of non-recognizers). Factors a¡ecting the level of these error rates themselves, their evolution and their long-term stability are discussed. Keywords: altruism; kin recognition; Hamilton’s rule; recognition errors the null hypothesis is wrongly accepted. In kin recogni- 1. INTRODUCTION tion, an acceptance error (type I error) occurs when an Although various exceptions to Hamilton’s (1964a,b) rule individual identi¢es a social partner as kin when it is non- have been noted when the simplifying assumptions of the kin, whereas a rejection error (type II error) occurs when theory are violated (e.g. -
Mutation Bias Shapes the Spectrum of Adaptive Substitutions
bioRxiv preprint doi: https://doi.org/10.1101/2021.04.14.438663; this version posted April 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Mutation bias shapes the spectrum of adaptive substitutions 1,2 1,2 3 4,*,@ 1,2,*,@ 2 Alejandro V. Cano , Hana Rozhoňová , Arlin Stoltzfus , David M. McCandlish , and Joshua L. Payne 1 3 Institute of Integrative Biology, ETH, Zurich, Switzerland 2 4 Swiss Institute of Bioinformatics, Lausanne, Switzerland 3 5 Office of Data and Informatics, Material Measurement Laboratory, NIST, and Institute for Bioscience and 6 Biotechnology Research, Rockville, USA 4 7 Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA * 8 These authors contributed equally @ 9 Corresponding author 10 ABSTRACT 11 Evolutionary adaptation often occurs via the fixation of beneficial point mutations, but different types of mutation 12 may differ in their relative frequencies within the collection of substitutions contributing to adaptation in any given 13 species. Recent studies have established that this spectrum of adaptive substitutions is enriched for classes of mutations 14 that occur at higher rates. Yet, little is known at a quantitative level about the precise extent of this enrichment, or 15 its dependence on other factors such as the beneficial mutation supply or demographic conditions. Here we address 16 the extent to which the mutation spectrum shapes the spectrum of adaptive amino acid substitutions by applying a 17 codon-based negative binomial regression model to three large data sets that include thousands of amino acid changes 18 identified in natural and experimental adaptation in S. -
Apis Mellifera L.)
The development of tools for network analysis in the honey bee (Apis mellifera L.) Antoine Lecocq Department of Ecology Uppsala, 2011 Antoine Lecocq Title: The development of tools for network analysis in the honey bee (Apis mellifera L.) Supervisor: Olle Terenius, Assistant Professor Swedish University of Agricultural Sciences Department of Ecology Co Supervisors: Barbara Locke, PhD candidate SLU Department of Ecology Annette Bruun Jensen MSc, Associate Professor University of Copenhagen, Faculty of Life Sciences External mentor: Cris Luengo SLU and Uppsala University Examiner: Ingemar Fries, Professor SLU Department of Ecology Credits: 30 ECTS Level: E Course title: Independent Project in Biology - Master´s thesis Course code: EX0565 Programme/education: EnvEuro Environmental Science in Europe Place of publication: SLU, Swedish University of Agricultural Sciences, Faculty of Natural Resources and Agricultural Sciences, Department of Ecology, Uppsala Year of publication: 2011 Project number: 2011:15 Online publication: http://stud.epsilon.slu.se Key Words: Honey bee, transmission, network, disease, light 2 ABSTRACT The honey bee (Apis mellifera) has accompanied Man for thousands of years, and yet somehow, some aspects of this most studied of insects remain uncertain. To this day, details of the physiology, disease transmission, social organisation and behaviour of this animal are still unclear. The development of technology and computing and the use of tagging and automatic monitoring have already contributed in shedding light on some of the intricacies of sociality amongst insects. In this project, we hoped to develop further tools for the study of disease transmission though social networks in the honeybee, and shed some light on factors which might affect the behaviour of the bees in an experimental setting. -
Kin-Biased Social Behaviour in Wild Adult Female White-Faced Capuchins, Cebus Capucinus
ANIMAL BEHAVIOUR, 2008, 76, 187e199 doi:10.1016/j.anbehav.2008.01.020 Available online at www.sciencedirect.com Kin-biased social behaviour in wild adult female white-faced capuchins, Cebus capucinus SUSAN PERRY*†,JOSEPHH.MANSON*†,LAURAMUNIZ†, JULIE GROS-LOUIS‡ &LINDAVIGILANT† *Department of Anthropology and Center for Behavior, Evolution and Culture, University of California, Los Angeles yMax Planck Institute for Evolutionary Anthropology zDepartment of Psychology, Indiana University (Received 16 October 2007; initial acceptance 30 October 2007; final acceptance 4 January 2008; published online 27 May 2008; MS. number: A10889R) Studies of kin bias in the distribution of social behaviour in group-living matrifocal species generally underline the importance of bonds among female kin. However, few studies examine either how kin bias may be affected by variation in the availability of kin or the relevance of paternal kin. In this study, we used genetic and behavioural data to analyse correlates of coalition formation, proximity, grooming and dominance relations among female white-faced capuchins over a 10-year period during which the number of adult females in the group varied from 6 to 10. Females sided with the most closely related of two opponents when joining coalitions. Both dominance rank and kinship influenced proximity and grooming patterns. In particular, when group size was small, mean relatedness high and interdyadic var- iation in relatedness low, rank distance was a better predictor of proximity and grooming than was kinship distance. However, when group size was large, mean relatedness lower and interdyadic variation in relat- edness higher, females significantly biased their grooming and spatial proximity towards kin. -
The Development of Tools for Network Analysis in the Honey Bee (Apis Mellifera L.)
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Epsilon Archive for Student Projects The development of tools for network analysis in the honey bee (Apis mellifera L.) Antoine Lecocq Department of Ecology Uppsala, 2011 Antoine Lecocq Title: The development of tools for network analysis in the honey bee (Apis mellifera L.) Supervisor: Olle Terenius, Assistant Professor Swedish University of Agricultural Sciences Department of Ecology Co Supervisors: Barbara Locke, PhD candidate SLU Department of Ecology Annette Bruun Jensen MSc, Associate Professor University of Copenhagen, Faculty of Life Sciences External mentor: Cris Luengo SLU and Uppsala University Examiner: Ingemar Fries, Professor SLU Department of Ecology Credits: 30 ECTS Level: E Course title: Independent Project in Biology - Master´s thesis Course code: EX0565 Programme/education: EnvEuro Environmental Science in Europe Place of publication: SLU, Swedish University of Agricultural Sciences, Faculty of Natural Resources and Agricultural Sciences, Department of Ecology, Uppsala Year of publication: 2011 Project number: 2011:15 Online publication: http://stud.epsilon.slu.se Key Words: Honey bee, transmission, network, disease, light 2 ABSTRACT The honey bee (Apis mellifera) has accompanied Man for thousands of years, and yet somehow, some aspects of this most studied of insects remain uncertain. To this day, details of the physiology, disease transmission, social organisation and behaviour of this animal are still unclear. The development of technology and computing and the use of tagging and automatic monitoring have already contributed in shedding light on some of the intricacies of sociality amongst insects. In this project, we hoped to develop further tools for the study of disease transmission though social networks in the honeybee, and shed some light on factors which might affect the behaviour of the bees in an experimental setting.