Landscape Ecology”
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Inbreeding Effects in Wild Populations
230 Review TRENDS in Ecology & Evolution Vol.17 No.5 May 2002 43 Putz, F.E. (1984) How trees avoid and shed lianas. estimate of total aboveground biomass for an neotropical forest of French Guiana: spatial and Biotropica 16, 19–23 eastern Amazonian forest. J. Trop. Ecol. temporal variability. J. Trop. Ecol. 17, 79–96 44 Appanah, S. and Putz, F.E. (1984) Climber 16, 327–335 52 Pinard, M.A. and Putz, F.E. (1996) Retaining abundance in virgin dipterocarp forest and the 48 Fichtner, K. and Schulze, E.D. (1990) Xylem water forest biomass by reducing logging damage. effect of pre-felling climber cutting on logging flow in tropical vines as measured by a steady Biotropica 28, 278–295 damage. Malay. For. 47, 335–342 state heating method. Oecologia 82, 350–361 53 Chai, F.Y.C. (1997) Above-ground biomass 45 Laurance, W.F. et al. (1997) Biomass collapse in 49 Restom, T.G. and Nepstad, D.C. (2001) estimation of a secondary forest in Sarawak. Amazonian forest fragments. Science Contribution of vines to the evapotranspiration of J. Trop. For. Sci. 9, 359–368 278, 1117–1118 a secondary forest in eastern Amazonia. Plant 54 Putz, F.E. (1983) Liana biomass and leaf area of a 46 Meinzer, F.C. et al. (1999) Partitioning of soil Soil 236, 155–163 ‘terra firme’ forest in the Rio Negro basin, water among canopy trees in a seasonally dry 50 Putz, F.E. and Windsor, D.M. (1987) Liana Venezuela. Biotropica 15, 185–189 tropical forest. Oecologia 121, 293–301 phenology on Barro Colorado Island, Panama. -
Equilibrium Theory of Island Biogeography: a Review
Equilibrium Theory of Island Biogeography: A Review Angela D. Yu Simon A. Lei Abstract—The topography, climatic pattern, location, and origin of relationship, dispersal mechanisms and their response to islands generate unique patterns of species distribution. The equi- isolation, and species turnover. Additionally, conservation librium theory of island biogeography creates a general framework of oceanic and continental (habitat) islands is examined in in which the study of taxon distribution and broad island trends relation to minimum viable populations and areas, may be conducted. Critical components of the equilibrium theory metapopulation dynamics, and continental reserve design. include the species-area relationship, island-mainland relation- Finally, adverse anthropogenic impacts on island ecosys- ship, dispersal mechanisms, and species turnover. Because of the tems are investigated, including overexploitation of re- theoretical similarities between islands and fragmented mainland sources, habitat destruction, and introduction of exotic spe- landscapes, reserve conservation efforts have attempted to apply cies and diseases (biological invasions). Throughout this the theory of island biogeography to improve continental reserve article, theories of many researchers are re-introduced and designs, and to provide insight into metapopulation dynamics and utilized in an analytical manner. The objective of this article the SLOSS debate. However, due to extensive negative anthropo- is to review previously published data, and to reveal if any genic activities, overexploitation of resources, habitat destruction, classical and emergent theories may be brought into the as well as introduction of exotic species and associated foreign study of island biogeography and its relevance to mainland diseases (biological invasions), island conservation has recently ecosystem patterns. become a pressing issue itself. -
A Perspective on the Geodynamics And
Title: Oceanic archipelagos: a perspective on the geodynamics and biogeography of the World’s smallest biotic provinces Journal Issue: Frontiers of Biogeography, 8(2) Author: Triantis, Kostas, National and Kapodistrian University of Athens Whittaker, Robert J. Fernández-Palacios, José María Geist, Dennis J. Publication Date: 2016 Permalink: http://escholarship.org/uc/item/744009b2 Acknowledgements: D.J. Geist acknowledges the support of NSF (EAR-1145271). We thank the editors, Luis Valente and an anonymous referee for constructive comments on the manuscript. Author Bio: Assistant Professor Keywords: Diversity, island biogeography, hotspot, mantle, macroecology, macroevolution, meta- archipelagos, subsidence, island evolution, volcanic islands Local Identifier: fb_29605 Abstract: Since the contributions of Charles Darwin and Alfred Russel Wallace, oceanic archipelagos have played a central role in the development of biogeography. However, despite the critical influence of oceanic islands on ecological and evolutionary theory, our focus has remained limited to either the island-level of specific archipelagos or single archipelagos. Recently, it was proposed that oceanic archipelagos qualify as biotic provinces, with diversity primarily reflecting a balance between speciation and extinction, with colonization having a minor role. Here we focus on major attributes of the archipelagic geological dynamics that can affect diversity at both the island and the archipelagic level. We also re-affirm that oceanic archipelagos are appropriate spatiotemporal -
Protected Areas and Biodiversity Conservation I: Reserve Planning and Design
Network of Conservation Educators & Practitioners Protected Areas and Biodiversity Conservation I: Reserve Planning and Design Author(s): Eugenia Naro-Maciel, Eleanor J. Stering, and Madhu Rao Source: Lessons in Conservation, Vol. 2, pp. 19-49 Published by: Network of Conservation Educators and Practitioners, Center for Biodiversity and Conservation, American Museum of Natural History Stable URL: ncep.amnh.org/linc/ This article is featured in Lessons in Conservation, the official journal of the Network of Conservation Educators and Practitioners (NCEP). NCEP is a collaborative project of the American Museum of Natural History’s Center for Biodiversity and Conservation (CBC) and a number of institutions and individuals around the world. Lessons in Conservation is designed to introduce NCEP teaching and learning resources (or “modules”) to a broad audience. NCEP modules are designed for undergraduate and professional level education. These modules—and many more on a variety of conservation topics—are available for free download at our website, ncep.amnh.org. To learn more about NCEP, visit our website: ncep.amnh.org. All reproduction or distribution must provide full citation of the original work and provide a copyright notice as follows: “Copyright 2008, by the authors of the material and the Center for Biodiversity and Conservation of the American Museum of Natural History. All rights reserved.” Illustrations obtained from the American Museum of Natural History’s library: images.library.amnh.org/digital/ SYNTHESIS 19 Protected Areas and Biodiversity Conservation I: Reserve Planning and Design Eugenia Naro-Maciel,* Eleanor J. Stering, † and Madhu Rao ‡ * The American Museum of Natural History, New York, NY, U.S.A., email [email protected] † The American Museum of Natural History, New York, NY, U.S.A., email [email protected] ‡ Wildlife Conservation Society, New York, NY, U.S.A., email [email protected] Source: K. -
Translocations and the 'Genetic Rescue' of Bottlenecked Populations
Translocations and the ‘genetic rescue’ of bottlenecked populations ATHESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN WILDLIFE CONSERVATION AT THE UNIVERSITY OF CANTERBURY SOL HEBER SEPTEMBER 2012 Abstract Many species around the world have passed through severe population bottlenecks due to an- thropogenic influences such as habitat loss or fragmentation, the introduction of exotic predators, pollution and excessive hunting. Severe bottlenecks are expected to lead to increased inbreed- ing depression and the loss of genetic diversity, and hence reduce the long-term viability of post- bottlenecked populations. The objective of this thesis was to examine both the consequences of severe bottlenecks and the use of translocations to ameliorate the effects of inbreeding due to bot- tlenecks. Given the predicted increase in probability of inbreeding in smaller populations, one would expect inbreeding depression to increase as the size of a population bottleneck decreases. Deter- mining the generality of such a relationship is critical to conservation efforts aimed at minimising inbreeding depression among threatened species. I therefore investigated the relationship between bottleneck size and population viability using hatching failure as a fitness measure in a sample of threatened bird species worldwide. Bottleneck size had a significant negative effect on hatch- ing failure, and this relationship held when controlling for confounding effects of phylogeny, body size, clutch size, time since bottleneck, and latitude. All species passing through bottlenecks of ∼100–150 individuals exhibited increased hatching failure. My results confirm that the negative consequences of bottlenecks on hatching success are widespread, and highlight the need for conser- vation managers to prevent severe bottlenecks. -
Landscape Design
Schueller NRE 509 What allowed your metapopulation to persist (not crash) even when populations Schueller NRE 509 Lecture 19: went extinct? Landscape Ecology Applied – High enough: _____________ 1. Fragmentation 2. The Design of Reserves and Not too high:______________ Landscapes Landscape Ecology APPLIED: Causes of fragmentation? 1. Fragmentation a. What is it/what does it look like? •Natural b. What causes it? - fires, floods, succession c. What are the consequences? •Anthropogenic - Previously continuous NOTICE Variation in patch & habitat is fragmented matrix type, and: into patches within a • Area matrix • Shape • Arrangement (connectivity) The world’s ongoing fragmentation experiments Haddad et al. 2015. Habitat fragmentation and its lasting impact on Causes of fragmentation? Earth’s ecosystems. Sci Adv. 1:e1500052 •Natural - fires, floods, succession,… •Anthropogenic - agriculture, logging, development, oil & gas extraction, mining,… - fences, roads, powerlines, dams, … What are the consequences? 1 Schueller NRE 509 • Largest and longest-running experiment to General findings: Ecological study fragmentation in tropical forests • Increased mortality of mechanisms? • Manaus, Brazil tree species • Started in 1979 • Loss of frugivorous Use your smarts to birds in small fragments • By logging, set up a series of forest patches, • Loss of large predators come up with specific ranging in size from 1 to 100 ha in small fragments hypotheses •Increase in generalist http://pdbff.inpa.gov.br/iarea.html species What are the implications of fragmentation? 1. AREA effects (fragment size) How large is enough? What does it depend on? Species-area For example, - Trophic level relationship • Butterflies that move less - Dispersion of Competition = than128 m in their lifetime resources in smaller populations the habitat = increased chance • Mice with home ranges of of extinction about half a hectare. -
Central Concepts and Issues of Landscape Ecology
1 Central Concepts and Issues of Landscape Ecology JOHN A. H ••• the grand challenge is to forge a conceptual and theoretical ogy, embracing in one manner or another individual responses and population dynamics, and explaining patterns in species abundance caused by complex landscapes and patterns driven by complex dynamics" (Hanski 1999:264). 1.1 Introduction The objective of biological conservation is the long-term maintenance of popula tions or species or, more broadly, of the Earth's biodiversity. Many of the threats that elicit conservation concern result in one way or another from human land use. Population sizes may become prccariously small when suitablc habitat is lost or becomes spatially fragmented, increasing the likelihood of extinction. ChangeI'> in land cover may affect interactions between predator and prey or parasite and host populations. The spread of invasive or exotic species, disease, or distur bances such as fire may be enhanced by shifts in the distribution of natural, agri cultural, or urbanized areas. The inful'>ion of pollutants into aquatic ecosystems from terrestrial sources such as agriculture may be enhanced or reduced by the characteristics of the landscape between source and end point. Virtually all con servation issues are ultimately land-use issues. Landscape ecology deals with the causes and consequences of the spatial com position and configuration of landscape mosaics. Because changes in land use alter landscape composition and configuration, landscape ecology and biological conservation are obviously closely linked. Both landscape ecology and conserva tion biology are relatively young disciplines, however, so this conceptual mar riage has yet to be fully consurmnated. -
The Alluring Simplicity and Complex Reality of Genetic Rescue
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Publications, Agencies and Staff of the U.S. Department of Commerce U.S. Department of Commerce 9-2004 The alluring simplicity and complex reality of genetic rescue David A. Tallmon University of Alaska Southeast, [email protected] Gordon Luikart University of Montana, [email protected] Robin Waples NOAA, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/usdeptcommercepub Tallmon, David A.; Luikart, Gordon; and Waples, Robin, "The alluring simplicity and complex reality of genetic rescue" (2004). Publications, Agencies and Staff of the U.S. Department of Commerce. 480. https://digitalcommons.unl.edu/usdeptcommercepub/480 This Article is brought to you for free and open access by the U.S. Department of Commerce at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Publications, Agencies and Staff of the U.S. Department of Commerce by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Review TRENDS in Ecology and Evolution Vol.19 No.9 September 2004 The alluring simplicity and complex reality of genetic rescue David A. Tallmon1, Gordon Luikart1 and Robin S. Waples2 aLaboratoire d’Ecologie Alpine, Ge´nomique des Populations et Biodiversite´, CNRS UMR 5553, Universite´Joseph Fourier, BP 53, 38041 Grenoble, Cedex 09, France bNational Marine Fisheries Service, Northwest Fisheries Science Center, 2725 Montlake Boulevard East, Seattle, WA 98112, USA A series of important new theoretical, experimental and yet crucial role in the evolution of small natural observational studies demonstrate that just a few populations and can, under some circumstances, be an immigrants can have positive immediate impacts on effective conservation tool. -
How Does Habitat Fragmentation Affect Biodiversity? a Controversial Question at the Coreof Conservation Biology
Biological Conservation xxx (xxxx) xxx–xxx Contents lists available at ScienceDirect Biological Conservation journal homepage: www.elsevier.com/locate/biocon Editorial How does habitat fragmentation affect biodiversity? A controversial question at the coreof conservation biology Does habitat fragmentation harm biodiversity? For many years, production based in part on concerns about the negative effects of most conservation biologists would say “yes.” It seems intuitive that fragmentation (OMNR, 2002; Fahrig, 2017). fragmentation divides habitats into smaller patches, which support Fahrig (2017) recently argued that the evidence base for these be- fewer species (Haddad et al., 2015). Edge effects further erode the liefs, recommendations, and actions is not as strong as many think, ability of small patches to support some species. This reasoning has largely due to the confounding effects of scale, habitat amount, and been invoked, for example, when interpreting the results of iconic fragmentation. In a separate essay, Fahrig (2018) described the history conservation experiments and studies, such as the large forest frag- of research that led to the current understanding (or misunderstanding) ments experiment in the Brazilian Amazon (Laurance et al., 2011), and regarding the effects of fragmentation on biodiversity. Processes that has been supported by meta-analyses of the findings of fragmentation occur at local patch scales—the scale of the vast majority of fragmen- experiments (Haddad et al., 2015). The negative effects of fragmenta- tation studies—may not be the dominant processes that affect biodi- tion are taught to students in introductory biology, ecology, and con- versity at larger landscape scales. Moreover, in practice, landscapes servation courses and featured in textbooks. -
Reviewing the Consequences of Genetic Purging on the Success of Rescue 3 Programs
bioRxiv preprint doi: https://doi.org/10.1101/2021.07.15.452459; this version posted July 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Authors: Noelia Pérez-Pereiraa, Armando Caballeroa and Aurora García-Doradob 2 Article title: Reviewing the consequences of genetic purging on the success of rescue 3 programs 4 5 6 a Centro de Investigación Mariña, Universidade de Vigo, Facultade de Bioloxía, 36310 Vigo, 7 Spain. 8 9 b Departamento de Genética, Fisiología y Microbiología, Universidad Complutense, Facultad 10 de Biología, 28040 Madrid, Spain. 11 12 13 Corresponding author: Aurora García-Dorado. Departamento de Genética, Fisiología y 14 Microbiología, Universidad Complutense, Facultad de Biología, 28040 Madrid, Spain. 15 Email address: [email protected] 16 17 ORCID CODES: 18 Noelia Pérez-Pereira: 0000-0002-4731-3712 19 Armando Caballero: 0000-0001-7391-6974 20 Aurora García-Dorado: 0000-0003-1253-2787 21 22 23 24 25 26 27 28 29 30 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.07.15.452459; this version posted July 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 31 DECLARATIONS: 32 Funding: This work was funded by Agencia Estatal de Investigación (AEI) (PGC2018- 33 095810-B-I00 and PID2020-114426GB-C21), Xunta de Galicia (GRC, ED431C 2020-05) 34 and Centro singular de investigación de Galicia accreditation 2019-2022, and the European 35 Union (European Regional Development Fund - ERDF), Fondos Feder “Unha maneira de 36 facer Europa”. -
Shafer * Natural Resources, Stewardship and Science, National Park Service 1849 C St
Biological Conservation 100 (2001) 215±227 www.elsevier.com/locate/biocon Inter-reserve distance Craig L. Shafer * Natural Resources, Stewardship and Science, National Park Service 1849 C St. NW, Washington DC 20240, USA Received 14 March 2000; received in revised form 20 November 2000; accepted 21 December 2000 Abstract Since the mid-1970s, reserve planners have been advised to locate reserves in close proximity to facilitate biotic migration. The alternative, putting great distance between reserves as a safeguard against catastrophe or long-standing chronic degradation forces, has received little discussion. The demise of a population can be caused by both natural and anthropogenic agents and the latter, including poaching and global warming, could be the bigger threat. Reserves sharing biotic components, whether close together or far apart, have advantages as well as costs. We need to consider whether the result of adopting the proximate reserve design guideline to preserve maximum species number will contribute to the potential extinction or extirpation of some rare ¯agship spe- cies? Should such extinctions occur, will society be understanding of science-based advise? Current conservation dogma that claims reserves should be located in close proximity demands more scrutiny because that choice may be tested this century. Published by Elsevier Science Ltd. Keywords: Catastrophe; Reserve; Design; Planning; Management 1. Introduction sur®cial phenomena (e.g. earthquakes, meteor strikes). In addition, scientists usually assume that such geologi- Simberlo (1998) asked how the adoption of goals cal events are infrequent in historical time (Raup, 1984). like ``biological diversity management'' supersedes When scientists use the term catastrophe for biological management of their component species? The intent of impacts, which may have natural or anthropogenic the earliest reserve design guidelines (e.g. -
For Peer Review 19 15 4Department of Biology, University of Missouri at St
Global Ecology and Biogeography New Directions in Isla nd Biogeography Journal: Global Ecology and Biogeography ManuscriptFor ID GEB-2016-0004.R1 Peer Review Manuscript Type: Research Reviews Date Submitted by the Author: n/a Complete List of Authors: Santos, Ana; Museo Nacional de Ciencias Naturales (CSIC), Department of Biogeography & Global Change; Universidade dos Açores , Centre for Ecology, Evolution and Environmental Changes (cE3c)/Azorean Biodiversity Group Field, Richard; University of Nottingham, School of Geography; Ricklefs, Robert; University of Missouri-St,. Louis, Biology Climatic niche, evolutionary processes, General Dynamic Model, Invasive species, marine environments, Natural laboratories, Species-area Keywords: relationship, species interactions, Equilibrium Theory of Island Biogeography, Community Assembly Page 9 of 61 Global Ecology and Biogeography 1 2 3 1 Manuscript type: Research Review 4 2 5 3 New Directions in Island Biogeography 6 4 7 1,2, 3 4 8 5 Ana M. C. Santos *, Richard Field & Robert E. Ricklefs 9 6 10 7 1 Department of Biogeography & Global Change, Museo Nacional de Ciencias Naturales 11 8 (CSIC), C/ José Gutiérrez Abascal 2, 28006 Madrid, Spain. Email: 12 9 [email protected] 13 2 14 10 Centre for Ecology, Evolution and Environmental Changes (cE3c)/Azorean Biodiversity 15 11 Group and Universidade dos Açores – Departamento de Ciências Agrárias, 9700-042 Angra 16 12 do Heroísmo, Açores, Portugal 17 13 3School of Geography, University of Nottingham, NG7 2RD, UK. Email: 18 14 [email protected] Peer Review 19 15 4Department of Biology, University of Missouri at St. Louis, One University Boulevard, St. 20 21 16 Louis, MO 63121 USA.