Package 'Drake'
Total Page:16
File Type:pdf, Size:1020Kb
Package ‘drake’ December 11, 2018 Title A Pipeline Toolkit for Reproducible Computation at Scale Description A general-purpose computational engine for data analysis, drake rebuilds intermediate data objects when their dependencies change, and it skips work when the results are already up to date. Not every execution starts from scratch, there is native support for parallel and distributed computing, and completed projects have tangible evidence that they are reproducible. Extensive documentation, from beginner-friendly tutorials to practical examples and more, is available at the reference website <https://ropensci.github.io/drake/> and the online manual <https://ropenscilabs.github.io/drake-manual/>. Version 6.2.1 License GPL-3 URL https://github.com/ropensci/drake BugReports https://github.com/ropensci/drake/issues Depends R (>= 3.3.0) Imports codetools, digest, formatR, igraph, methods, pkgconfig, rlang (>= 0.2.0), storr (>= 1.1.0), tibble, utils Suggests abind, bindr, callr, clustermq, CodeDepends, crayon, datasets, DBI, downloader, future, future.apply, grDevices, ggplot2, ggraph, knitr, lubridate, networkD3, parallel, prettycode, RSQLite, stats, testthat, tidyselect (>= 0.2.4), txtq, rmarkdown, styler, visNetwork, webshot VignetteBuilder knitr Encoding UTF-8 Language en-US RoxygenNote 6.1.1 NeedsCompilation no 1 2 R topics documented: Author William Michael Landau [aut, cre] (<https://orcid.org/0000-0003-1878-3253>), Alex Axthelm [ctb], Jasper Clarkberg [ctb], Kirill Müller [ctb], Ben Marwick [rev], Peter Slaughter [rev], Ben Bond-Lamberty [ctb] (<https://orcid.org/0000-0001-9525-4633>), Eli Lilly and Company [cph] Maintainer William Michael Landau <[email protected]> Repository CRAN Date/Publication 2018-12-10 23:20:03 UTC R topics documented: drake-package . .4 analysis_wildcard . .5 available_hash_algos . .6 bind_plans . .6 build_times . .7 built.............................................8 cached . .9 cache_namespaces . 11 cache_path . 12 check_plan . 12 clean . 13 cleaned_namespaces . 16 clean_mtcars_example . 16 code_to_plan . 17 configure_cache . 18 dataset_wildcard . 20 default_cache_path . 20 default_long_hash_algo . 21 default_Makefile_args . 22 default_Makefile_command . 23 default_parallelism . 23 default_recipe_command . 24 default_short_hash_algo . 24 dependency_profile . 25 deps_code . 27 deps_target . 28 diagnose . 29 drake_build . 31 drake_cache_log . 32 drake_cache_log_file . 34 drake_config . 36 drake_debug . 42 R topics documented: 3 drake_envir . 44 drake_example . 45 drake_examples . 46 drake_gc . 47 drake_get_session_info . 48 drake_ggraph . 49 drake_graph_info . 51 drake_hpc_template_file . 53 drake_hpc_template_files . 54 drake_meta . 55 drake_palette . 56 drake_plan . 57 drake_plan_source . 59 drake_quotes . 60 drake_session . 61 drake_strings . 62 drake_tip . 63 drake_unquote . 63 evaluate_plan . 64 expand_plan . 66 expose_imports . 67 failed . 69 file_in . 71 file_out . 72 file_store . 73 find_cache . 74 find_project . 75 gather_by . 75 gather_plan . 77 get_cache . 78 ignore . 80 imported . 81 in_progress . 82 knitr_deps . 83 knitr_in . 84 legend_nodes . 85 load_mtcars_example . 86 long_hash . 87 make............................................. 88 Makefile_recipe . 95 make_imports . 97 make_targets . 98 make_with_config . 99 map_plan . 100 missed . 101 new_cache . 102 outdated . 103 parallelism_choices . 104 4 drake-package plan_analyses . 105 plan_summaries . 106 plan_to_code . 107 plan_to_notebook . ..