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Rates of Molecular Evolution and Diversification in Plants: Chloroplast
Duchene and Bromham BMC Evolutionary Biology 2013, 13:65 http://www.biomedcentral.com/1471-2148/13/65 RESEARCH ARTICLE Open Access Rates of molecular evolution and diversification in plants: chloroplast substitution rates correlate with species-richness in the Proteaceae David Duchene* and Lindell Bromham Abstract Background: Many factors have been identified as correlates of the rate of molecular evolution, such as body size and generation length. Analysis of many molecular phylogenies has also revealed correlations between substitution rates and clade size, suggesting a link between rates of molecular evolution and the process of diversification. However, it is not known whether this relationship applies to all lineages and all sequences. Here, in order to investigate how widespread this phenomenon is, we investigate patterns of substitution in chloroplast genomes of the diverse angiosperm family Proteaceae. We used DNA sequences from six chloroplast genes (6278bp alignment with 62 taxa) to test for a correlation between diversification and the rate of substitutions. Results: Using phylogenetically-independent sister pairs, we show that species-rich lineages of Proteaceae tend to have significantly higher chloroplast substitution rates, for both synonymous and non-synonymous substitutions. Conclusions: We show that the rate of molecular evolution in chloroplast genomes is correlated with net diversification rates in this large plant family. We discuss the possible causes of this relationship, including molecular evolution driving diversification, speciation increasing the rate of substitutions, or a third factor causing an indirect link between molecular and diversification rates. The link between the synonymous substitution rate and clade size is consistent with a role for the mutation rate of chloroplasts driving the speed of reproductive isolation. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Sand Mine Near Robertson, Western Cape Province
SAND MINE NEAR ROBERTSON, WESTERN CAPE PROVINCE BOTANICAL STUDY AND ASSESSMENT Version: 1.0 Date: 06 April 2020 Authors: Gerhard Botha & Dr. Jan -Hendrik Keet PROPOSED EXPANSION OF THE SAND MINE AREA ON PORTION4 OF THE FARM ZANDBERG FONTEIN 97, SOUTH OF ROBERTSON, WESTERN CAPE PROVINCE Report Title: Botanical Study and Assessment Authors: Mr. Gerhard Botha and Dr. Jan-Hendrik Keet Project Name: Proposed expansion of the sand mine area on Portion 4 of the far Zandberg Fontein 97 south of Robertson, Western Cape Province Status of report: Version 1.0 Date: 6th April 2020 Prepared for: Greenmined Environmental Postnet Suite 62, Private Bag X15 Somerset West 7129 Cell: 082 734 5113 Email: [email protected] Prepared by Nkurenkuru Ecology and Biodiversity 3 Jock Meiring Street Park West Bloemfontein 9301 Cell: 083 412 1705 Email: gabotha11@gmail com Suggested report citation Nkurenkuru Ecology and Biodiversity, 2020. Section 102 Application (Expansion of mining footprint) and Final Basic Assessment & Environmental Management Plan for the proposed expansion of the sand mine on Portion 4 of the Farm Zandberg Fontein 97, Western Cape Province. Botanical Study and Assessment Report. Unpublished report prepared by Nkurenkuru Ecology and Biodiversity for GreenMined Environmental. Version 1.0, 6 April 2020. Proposed expansion of the zandberg sand mine April 2020 botanical STUDY AND ASSESSMENT I. DECLARATION OF CONSULTANTS INDEPENDENCE » act/ed as the independent specialist in this application; » regard the information contained in this -
FRC Newsletter
Tsui //Goab Newsletter APRIL 2019 [email protected] FRC AGM – 30 April 2019 Our annual general meeting will be on Tuesday 30th April 2019 at the Guide Hall in Alma road. Our main speaker this year will be Alex Lansdowne to report back on the progress regarding the Rondebosch Common Restoration plan. Plus Frances Taylor will give feedback on the work of Communitree. FRC Annual General Meeting Tuesday 30 April 2019 5:30 for 6pm Guide Hall – Alma Road Speaker: Alex Lansdowne – A vision for Rondebosch Common We encourage you to join us! We start the evening at 5:30pm with drinks and snacks followed by our guest speakers at 6pm. After some time for questions, we wrap up with the brief AGM agenda. And remember: Our book and cards will be available before the meeting and you can also renew your FRC membership. Friends of Rondebosch Common Page 1 SUPER RAFFLE! We are delighted to announce that Struik Nature, Penguin Random House have donated three books for us to raffle at the AGM to boost our fundraising efforts. 1: Field Guide to Wild Flowers of South Africa 2: Garden Birds in southern Africa 3: Gardeners Guide to Indigenous Garden Plants of southern Africa Raffle tickets will be on sale at the door at only R10 each. As an incentive – if you buy 5 tickets, you will get an extra 6th one free!! BOOKS and CARDS We do still have limited stock of our cards and our book, Rondebosch Common. The book will be on sale at the AGM for R150. -
HURTLING TOWARDS EXTINCTION Five Charismatic, Threatened Red Data List Plants
HURTLING TOWARDS EXTINCTION Five charismatic, threatened Red Data List plants. byJanice Golding, SABONET, c/o National Botanical Institute, Pretoria Plant Red Data Lists list extinct, threatened and potentially threatened plants that have been assigned risk categories according to guidelines set by the World Conservation Union (IUCN). Approximately 10% of South Africa's plant species appear on the Red Data List (RDL). Preliminary expectations are that many species categorized as 'indeter minate' or 'uncertain' should in fact be removed from the forthcoming Red Data List. In this article, five plant species with RDL status are selected, all of which are found in habitats that are subjected to human modification. These charismatic plants can serve as important flagships for conserving ecologically sensitive habitats. No reference is made to grasslands and important plant groups (such as cycads or ground succulents) that also desperately require protection against extinction. APONOGETON RANUNCULIFLORUS Aponogeton ranunculiflorus (Aponogetonaceae) is an aquatic vascular plant, known from humic tarns (sandstone depressions filled with water) from the Drakensberg summit. The species grows at an altitude of 2 600 m in the mist belt. The species straddles Lesotho and KwaZulu-Natal. Its RDL status was assessed by Hilton-Taylor as 'rare' and as 'vulnerable' by Scott-Shaw (based on past population declines, its limited distrib ution range and the few number of known localities). The type specimen was collected in Lesotho's Sehlabathebe National Park, in a 3 ha zone and was first described in 1972. Subsequent surveys have found more localities, all of which are within a 10 kIn radius of the type locality. -
Isopogon & Petrophile
A U S T R AL I A N N A T I V E P L A N T S A S S O C I A T I O N ( A U S T ) Isopogon & Petrophile Study Group Newsletter No. 24 April 2019 ISSN 1445-9493 Website http://anpsa.org.au/iso-petSG/ T H E P E T R O P H I L E I S S U E THE TOP THREE: What are they? And which was our members’ Number One? See our article. Photos: Royce Raleigh, Fiona Johnson, Catriona Bate Back issues of the Isopogon and Petrophile Study Group Newsletter are available at http://anpsa.org.au/iso-petSG/IPSG-news.html Isopogon & Petrophile Study Group Newsletter April 2019 1 STUDY GROUP LEADERS/NEWSLETTER EDITORS Catriona Bate & Phil Trickett Email: [email protected] Ph: 0409 789 567 T H E P E T R O P H I L E I S S U E Editorial How do you say it?? Distribution Characteristics History of the genus Petrophile naming Petrophile and Abbé Michel Gandoger – Peter Olde Solving the mystery of eastern petrophiles How to grow petrophiles How to propagate petrophiles Aulax trials A splash of red Natural hybrids Fire ecology Conservation issues The top petrophiles Where to buy petrophiles In the press Financial report Hello to all our members It’s a sad fact that there is barely a nursery in Australia you can walk into and find a petrophile plant to buy. And the common eastern species are particularly hard to acquire. Yet you can walk into Bunnings and buy a plant of Aulax, a genus no one has ever heard of and native to South Africa. -
The Distribution of Free Amino Acids in Diastella Salisb., Leucospermum R.BR. and Some Other Members of the Proteaceae
THE DISTRIBUTION OF FR~E AMINO ACIDS IN DIASTELLA SALISB. , LEUCOSPERHUH R. BR. AND SOME OTHER MEMBERS OF THE PROTEACEAE by Leslie Ward Powrie Thesis sub•itted in fulfil1ent of the require1ents of the degree UniversityMagister of Scienteae Cape Town at the University of Cape Town. Cape Town May 1986 Pro1oter : Prof. J. N. Eloff --University of Cape Town has been given right to reproduce this thesis in whole ~ or in part. Copyright Is held by the author. ·.. ~· The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town THE DISTRieUTION OF FREE AMINO ACIDS IN DIASTELLA SALISB., LEUCOSPERNVW R.BR. AND SOME OTHER MEMBERS OF THE PROTEACEAE " It is untenable ••• to view secondary plant 1etabolites as plant 'garbage cans' designed for 'containerizing' nonfunctional 1olecules." Rosenthal (1982) CONTENTS 1. INTRODUCTIOII .•.....•...••...............•...•..•....•••.•....•••.••....•..•••..••.••••.••••.•••••...•••••..•• 1 1.1 BackgrOII'MI I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I • I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I I t I I I I I I I I I I I I I 1 1. -
Biodiversity Fact Sheets: Threatened Species
Biodiversity Fact Sheets: Threatened Species * Supplementary document to a series of 8 biodiversity fact sheets* RED LIST PLANTS Critically Endangered (CR) Afrolimon purpuratum CR Aristea ericifolia erecta CR Arctotheca forbesiana CR Aspalathus aculeata CR Aspalathus horizontalis CR Aspalathus rycroftii CR Babiana leipoldtii CR Babiana regia CR Babiana secunda CR Cadiscus aquaticus CR Cephalophyllum parviflorum CR Chrysocoma esterhuyseniae CR Cliffortia acockii CR Cotula myriophylloides CR Cyclopia latifolia CR Diastella proteoides CR Disa barbata CR Disa nubigena CR Disa physodes CR Disa sabulosa CR Erica abietina diabolis CR Erica bolusiae bolusiae CR Erica heleogena CR Erica malmesburiensis CR Erica margaritacea CR Erica ribisaria CR Erica sociorum CR Erica ustulescens CR Erica vallis‐aranearum CR Geissorhiza eurystigma CR Geissorhiza malmesburiensis CR Geissorhiza purpurascens CR Gladiolus aureus CR Gladiolus griseus CR Hermannia procumbens procumbens CR Holothrix longicornu CR Ixia versicolor CR Lachenalia arbuthnotiae CR Lachenalia purpureo ‐caerulea CR Lampranthus tenuifolius CR Leucadendron floridum CR Leucadendron lanigerum laevigatum CR Leucadendron levisanus CR Leucadendron macowanii CR Leucadendron stellare CR Leucadendron thymifolium CR Leucadendron verticillatum CR Marasmodes oligocephala CR Marasmodes polycephala CR Metalasia distans CR Mimetes hottentoticus CR Moraea angulata CR Moraea aristata CR Muraltia satureioides salteri CR Oxalis natans CR Podalyria microphylla CR Polycarena silenoides CR Protea odorata CR Psoralea -
Ecology of Proteaceae with Special Reference to the Sydney Region
951 Ecology of Proteaceae with special reference to the Sydney region P.J. Myerscough, R.J. Whelan and R.A. Bradstock Myerscough, P.J.1, Whelan, R.J.2, and Bradstock, R.A.3 (1Institute of Wildlife Research, School of Biological Sciences (A08), University of Sydney, NSW 2006; 2Department of Biological Sciences, University of Wollongong, NSW 2522; 3Biodiversity Research and Management Division, NSW National Parks & Wildlife Service, PO Box 1967, Hurstville, NSW 1481) Ecology of Proteaceae with special reference to the Sydney region. Cunninghamia 6(4): 951–1015. In Australia, the Proteaceae are a diverse group of plants. They inhabit a wide range of environments, many of which are low in plant resources. They support a wide range of animals and other organisms, and show distinctive patterns of distribution in relation to soils, climate and geological history. These patterns of distribution, relationships with nutrients and other resources, interactions with animals and other organisms and dynamics of populations in Proteaceae are addressed in this review, particularly for the Sydney region. The Sydney region, with its wide range of environments, offers great opportunities for testing general questions in the ecology of the Proteaceae. For instance, its climate is not mediterranean, unlike the Cape region of South Africa, south- western and southern Australia, where much of the research on plants of Proteaceae growing in infertile habitats has been done. The diversity and abundance of Proteaceae vary in the Sydney region inversely with fertility of habitats. In the region’s rainforest there are few Proteaceae and their populations are sparse, whereas in heaths in the region, Proteaceae are often diverse and may dominate the canopy. -
Norrie's Plant Descriptions - Index of Common Names a Key to Finding Plants by Their Common Names (Note: Not All Plants in This Document Have Common Names Listed)
UC Santa Cruz Arboretum & Botanic Garden Plant Descriptions A little help in finding what you’re looking for - basic information on some of the plants offered for sale in our nursery This guide contains descriptions of some of plants that have been offered for sale at the UC Santa Cruz Arboretum & Botanic Garden. This is an evolving document and may contain errors or omissions. New plants are added to inventory frequently. Many of those are not (yet) included in this collection. Please contact the Arboretum office with any questions or suggestions: [email protected] Contents copyright © 2019, 2020 UC Santa Cruz Arboretum & Botanic Gardens printed 27 February 2020 Norrie's Plant Descriptions - Index of common names A key to finding plants by their common names (Note: not all plants in this document have common names listed) Angel’s Trumpet Brown Boronia Brugmansia sp. Boronia megastigma Aster Boronia megastigma - Dark Maroon Flower Symphyotrichum chilense 'Purple Haze' Bull Banksia Australian Fuchsia Banksia grandis Correa reflexa Banksia grandis - compact coastal form Ball, everlasting, sago flower Bush Anemone Ozothamnus diosmifolius Carpenteria californica Ozothamnus diosmifolius - white flowers Carpenteria californica 'Elizabeth' Barrier Range Wattle California aster Acacia beckleri Corethrogyne filaginifolia - prostrate Bat Faced Cuphea California Fuchsia Cuphea llavea Epilobium 'Hummingbird Suite' Beach Strawberry Epilobium canum 'Silver Select' Fragaria chiloensis 'Aulon' California Pipe Vine Beard Tongue Aristolochia californica Penstemon 'Hidalgo' Cat Thyme Bird’s Nest Banksia Teucrium marum Banksia baxteri Catchfly Black Coral Pea Silene laciniata Kennedia nigricans Catmint Black Sage Nepeta × faassenii 'Blue Wonder' Salvia mellifera 'Terra Seca' Nepeta × faassenii 'Six Hills Giant' Black Sage Chilean Guava Salvia mellifera Ugni molinae Salvia mellifera 'Steve's' Chinquapin Blue Fanflower Chrysolepis chrysophylla var. -
Parameterisation of Fire in LPX1 Vegetation Model
Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Open Access Geosci. Model Dev. Discuss., 7, 931–1000, 2014 Geoscientific www.geosci-model-dev-discuss.net/7/931/2014/ doi:10.5194/gmdd-7-931-2014 Model Development GMDD Discussions © Author(s) 2014. CC Attribution 3.0 License. 7, 931–1000, 2014 This discussion paper is/has been under review for the journal Geoscientific Model Parameterisation of Development (GMD). Please refer to the corresponding final paper in GMD if available. fire in LPX1 vegetation model Improved simulation of fire-vegetation D. I. Kelley et al. interactions in the Land surface Processes and eXchanges dynamic Title Page global vegetation model (LPX-Mv1) Abstract Introduction Conclusions References 1 1,2 1,3 D. I. Kelley , S. P. Harrison , and I. C. Prentice Tables Figures 1Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia 2 Geography & Environmental Sciences, School of Archaeology, Geography and J I Environmental Sciences (SAGES), University of Reading, Whiteknights, Reading, RG6 6AB, UK J I 3AXA Chair of Biosphere and Climate Impacts, Grantham Institute for Climate Change and Back Close Department of Life Sciences, Imperial College, Silwood Park Campus, Ascot SL5 7PY, UK Full Screen / Esc Received: 30 October 2013 – Accepted: 26 November 2013 – Published: 23 January 2014 Correspondence to: D. I. Kelley ([email protected]) Printer-friendly Version Published by Copernicus Publications on behalf of the European Geosciences Union. Interactive Discussion 931 Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Abstract GMDD The Land surface Processes and eXchanges (LPX) model is a fire-enabled dynamic global vegetation model that performs well globally but has problems representing fire 7, 931–1000, 2014 regimes and vegetative mix in savannas. -
Kirstenbosch NBG List of Plants That Provide Food for Honey Bees
Indigenous South African Plants that Provide Food for Honey Bees Honey bees feed on nectar (carbohydrates) and pollen (protein) from a wide variety of flowering plants. While the honey bee forages for nectar and pollen, it transfers pollen from one flower to another, providing the service of pollination, which allows the plant to reproduce. However, bees don’t pollinate all flowers that they visit. This list is based on observations of bees visiting flowers in Kirstenbosch National Botanical Garden, and on a variety of references, in particular the following: Plant of the Week articles on www.PlantZAfrica.com Johannsmeier, M.F. 2005. Beeplants of the South-Western Cape, Nectar and pollen sources of honeybees (revised and expanded). Plant Protection Research Institute Handbook No. 17. Agricultural Research Council, Plant Protection Research Institute, Pretoria, South Africa This list is primarily Western Cape, but does have application elsewhere. When planting, check with a local nursery for subspecies or varieties that occur locally to prevent inappropriate hybridisations with natural veld species in your vicinity. Annuals Gazania spp. Scabiosa columbaria Arctotis fastuosa Geranium drakensbergensis Scabiosa drakensbergensis Arctotis hirsuta Geranium incanum Scabiosa incisa Arctotis venusta Geranium multisectum Selago corymbosa Carpanthea pomeridiana Geranium sanguineum Selago canescens Ceratotheca triloba (& Helichrysum argyrophyllum Selago villicaulis ‘Purple Turtle’ carpenter bees) Helichrysum cymosum Senecio glastifolius Dimorphotheca