Multiple Phylogenetically Distinct Events Shaped the Evolution of Limb Skeletal Morphologies Associated with Bipedalism in the Jerboas
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Ricardo Mallarino Howard Hughes Medical Institute
Ricardo Mallarino Howard Hughes Medical Institute; Department of Organismic & Evolutionary Biology and Department of Molecular & Cellular Biology, Harvard University, 26 Oxford Street, Cambridge, MA Phone (617)-308-5895; email: [email protected] EDUCATION 2011-present Postdoctoral Fellow, Hopi Hoekstra Laboratory, Harvard University, Cambridge, MA 2005-2011 Ph.D., Biology, Arhat Abzhanov Laboratory, Harvard University, Cambridge, MA 1998-2003 B.S., Biology, Universidad de los Andes, Bogotá, Colombia RESEARCH INTERESTS Molecular basis of morphological change; developmental biology; ecology and evolutionary biology; genetics and genomics. RESEARCH EXPERIENCE 2011-present Department of Organismic & Evolutionary Biology and Department of Molecular & Cellular Biology, Hopi Hoekstra laboratory -Studied the molecular basis of local adaptation in Peromyscus mice using functional in vivo and in vitro approaches -Developed a new mammalian model species for studying the developmental basis of periodic pattern formation 2005-2011 Department of Organismic & Evolutionary Biology, Arhat Abzhanov laboratory -Identified a network of developmental genes responsible for generating beak diversity in Darwin’s finches -Studied beak patterning mechanisms in the relatives of Darwin’s finches 2005 Whitehead Institute, Susan Lindquist laboratory -Studied the role of molecular chaperones in controlling adaptive polyphenisms in insects 2003-2005 Smithsonian Tropical Research Institute, supervisors: Chris Jiggins and Biff Bermingham -Studied molecular systematics and phylogenetics of tropical butterflies 2001-2003 Smithsonian Tropical Research Institute, supervisor: Penelope Barnes -Studied coevolution of marine bivalves of the Family Lucinidae and their sulfur-oxidizing bacterial endosymbionts RESEARCH GRANTS AND AWARDS 2012 Putnam Expeditionary Grant; Harvard University 2009 Doctoral Dissertation Improvement Grant, National Science Foundation 2008 Summer Research Grant, Rockefeller Center for Latin American Studies, Harvard University 2005 Student Research Award, Dept. -
Genetic Diversity of Bartonella Species in Small Mammals in the Qaidam
www.nature.com/scientificreports OPEN Genetic diversity of Bartonella species in small mammals in the Qaidam Basin, western China Huaxiang Rao1, Shoujiang Li3, Liang Lu4, Rong Wang3, Xiuping Song4, Kai Sun5, Yan Shi3, Dongmei Li4* & Juan Yu2* Investigation of the prevalence and diversity of Bartonella infections in small mammals in the Qaidam Basin, western China, could provide a scientifc basis for the control and prevention of Bartonella infections in humans. Accordingly, in this study, small mammals were captured using snap traps in Wulan County and Ge’ermu City, Qaidam Basin, China. Spleen and brain tissues were collected and cultured to isolate Bartonella strains. The suspected positive colonies were detected with polymerase chain reaction amplifcation and sequencing of gltA, ftsZ, RNA polymerase beta subunit (rpoB) and ribC genes. Among 101 small mammals, 39 were positive for Bartonella, with the infection rate of 38.61%. The infection rate in diferent tissues (spleens and brains) (χ2 = 0.112, P = 0.738) and gender (χ2 = 1.927, P = 0.165) of small mammals did not have statistical diference, but that in diferent habitats had statistical diference (χ2 = 10.361, P = 0.016). Through genetic evolution analysis, 40 Bartonella strains were identifed (two diferent Bartonella species were detected in one small mammal), including B. grahamii (30), B. jaculi (3), B. krasnovii (3) and Candidatus B. gerbillinarum (4), which showed rodent-specifc characteristics. B. grahamii was the dominant epidemic strain (accounted for 75.0%). Furthermore, phylogenetic analysis showed that B. grahamii in the Qaidam Basin, might be close to the strains isolated from Japan and China. -
Small-Mammal Assemblages Inhabiting Sphagnum Peat Bogs in Various Regions of Poland
BIOLOGICAL LETT. 2012, 49(2): 115–133 Available online at: http:/www.versita.com/science/lifesciences/bl/ DOI: 10.2478/v10120-012-0013-4 Small-mammal assemblages inhabiting Sphagnum peat bogs in various regions of Poland MATEUSZ CIECHANOWSKI1, JAN CICHOCKI2, AGNIESZKA WAŻNA2 and BARBARA PIŁACIŃSKA3 1 Department of Vertebrate Ecology and Zoology, University of Gdańsk, al. Legionów 9, 80‑441 Gdańsk, Poland 2 Department of Zoology, Faculty of Biological Sciences, University of Zielona Góra, ul. prof. Z. Szafrana 1, 65‑516 Zielona Góra, Poland 3 Department of Systematic Zoology, Adam Mickiewicz University, Umultowska 89, 61‑614 Poznań, Poland Corresponding author: Mateusz Ciechanowski, [email protected] (Received on 19 May 2011; Accepted on 1 March 2012) Abstract: We studied species composition of assemblages of small mammals (rodents and shrews) inhab iting Polish 25 ombrotrophic mires and quaking bogs in several regions in order to reveal characteristic features of their quantitative structure and compare them between regions, internal zones of the bog habitats, and different levels of anthropogenic degradation. We reviewed also all published results of small-mammal trapping in such habitats. Mammals were captured in pitfalls, snap traps and live traps on 12 bogs of the Pomerania region, 4 bogs of the Orawa-Nowy Targ Basin (Kotlina Orawsko-Nowotarska), 3 bogs in the Świętokrzyskie Mts, and 6 bogs in Wielkopolska and the Lubusz Land. Additionally, we included materials collected from Barber traps (pitfalls) used during studies of epigeic invertebrates on 4 bogs. In total, 598 individuals of 12 species were collected. The number of pitfall captures per 100 trap- nights was very low (7.0–7.8), suggesting low population density. -
Mammals of Jordan
© Biologiezentrum Linz/Austria; download unter www.biologiezentrum.at Mammals of Jordan Z. AMR, M. ABU BAKER & L. RIFAI Abstract: A total of 78 species of mammals belonging to seven orders (Insectivora, Chiroptera, Carni- vora, Hyracoidea, Artiodactyla, Lagomorpha and Rodentia) have been recorded from Jordan. Bats and rodents represent the highest diversity of recorded species. Notes on systematics and ecology for the re- corded species were given. Key words: Mammals, Jordan, ecology, systematics, zoogeography, arid environment. Introduction In this account we list the surviving mammals of Jordan, including some reintro- The mammalian diversity of Jordan is duced species. remarkable considering its location at the meeting point of three different faunal ele- Table 1: Summary to the mammalian taxa occurring ments; the African, Oriental and Palaearc- in Jordan tic. This diversity is a combination of these Order No. of Families No. of Species elements in addition to the occurrence of Insectivora 2 5 few endemic forms. Jordan's location result- Chiroptera 8 24 ed in a huge faunal diversity compared to Carnivora 5 16 the surrounding countries. It shelters a huge Hyracoidea >1 1 assembly of mammals of different zoogeo- Artiodactyla 2 5 graphical affinities. Most remarkably, Jordan Lagomorpha 1 1 represents biogeographic boundaries for the Rodentia 7 26 extreme distribution limit of several African Total 26 78 (e.g. Procavia capensis and Rousettus aegypti- acus) and Palaearctic mammals (e. g. Eri- Order Insectivora naceus concolor, Sciurus anomalus, Apodemus Order Insectivora contains the most mystacinus, Lutra lutra and Meles meles). primitive placental mammals. A pointed snout and a small brain case characterises Our knowledge on the diversity and members of this order. -
Mites of the Family Myobiidae (Acari: Prostigmata) Parasitizing Rodents of the Former USSR A.V
Acarina 17 (2): 109–169 © Acarina 2009 MITES OF THE FAMILY MYOBIIDAE (ACARI: PROSTIGMATA) PARASITIZING RODENTS OF THE FORMER USSR A.V. Bochkov1, 2 1Zoological Institute of the Russian Academy of Sciences, Universitetskaya Emb. 1, 199034 Saint Pe- tersburg, Russia; e-mail: [email protected] 2Museum of Zoology, University of Michigan, 1109 Geddes Ave., Ann Arbor, Michigan 48109, USA ABSTRACT: Records of myobiid mites parasitizing rodents of the former USSR are summarized. Totally, 46 myobiid species belonging to 4 genera were recorded in the fauna of the former USSR: Austromyobia (2 species), Cryptomyobia (10 species), Myobia (7 species), and Radfordia with the 3 subgenera, Radfordia s.str. (4 species), Graphiurobia (6 species), and Microtimyobia (17 species). Seventy one rodent species were recorded as hosts of myobiids. More than 60% of potential myobiid hosts occur- ring in the fauna of the former USSR were examined. Keys to all recorded genera, subgenera, and species (males, females, and tritonymphs of most subgenera) are provided and supplied by figures where it is necessary. The emended diagnoses of all recorded mite genera and subgenera are provided. One species, Radfordia (Graphiurobia) selevinia sp. nov. from Selevinia betpakdalensis (Gliridae) is described as a new for science. The host-parasite relationships of myobiids and rodents of the former USSR are briefly discussed. In the examined region, myobiids are absent on representatives of the suborders Castorimorpha and Hystricomorpha. Among Sciuromorpha, myobiids (subgenus Graphiurobia) are recorded only on representatives of the family Gliridae. The suborder Myomorpha harbors myobiids of the 3 genera: Cryptomyobia — parasites of Dipodidae, excluding Sicistinae); Austromyobia — parasites of Gerbillinae, Myobia and Radfordia s.str. -
Checklist of Rodents and Insectivores of the Mordovia, Russia
ZooKeys 1004: 129–139 (2020) A peer-reviewed open-access journal doi: 10.3897/zookeys.1004.57359 RESEARCH ARTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research Checklist of rodents and insectivores of the Mordovia, Russia Alexey V. Andreychev1, Vyacheslav A. Kuznetsov1 1 Department of Zoology, National Research Mordovia State University, Bolshevistskaya Street, 68. 430005, Saransk, Russia Corresponding author: Alexey V. Andreychev ([email protected]) Academic editor: R. López-Antoñanzas | Received 7 August 2020 | Accepted 18 November 2020 | Published 16 December 2020 http://zoobank.org/C127F895-B27D-482E-AD2E-D8E4BDB9F332 Citation: Andreychev AV, Kuznetsov VA (2020) Checklist of rodents and insectivores of the Mordovia, Russia. ZooKeys 1004: 129–139. https://doi.org/10.3897/zookeys.1004.57359 Abstract A list of 40 species is presented of the rodents and insectivores collected during a 15-year period from the Republic of Mordovia. The dataset contains more than 24,000 records of rodent and insectivore species from 23 districts, including Saransk. A major part of the data set was obtained during expedition research and at the biological station. The work is based on the materials of our surveys of rodents and insectivo- rous mammals conducted in Mordovia using both trap lines and pitfall arrays using traditional methods. Keywords Insectivores, Mordovia, rodents, spatial distribution Introduction There is a need to review the species composition of rodents and insectivores in all regions of Russia, and the work by Tovpinets et al. (2020) on the Crimean Peninsula serves as an example of such research. Studies of rodent and insectivore diversity and distribution have a long history, but there are no lists for many regions of Russia of Copyright A.V. -
Yersinia Pestis in Small Rodents, Mongolia
LETTERS pathogens intrusion. Blackleg (1970, Author affi liations: Centre for Scientifi c 8. Andriamandimby SF, Randrianarivo- 1995) and the contagious ecthyma Research and Intelligence on Emerging Solofoniaina AE, Jeanmaire EM, Ra- vololomanana L, Razafi manantsoa LT, Infectious Diseases in the Indian Ocean, (1999) were probably introduced Rakotojoelinandrasana T, et al. Rift Val- into the country by live ruminants Sainte-Clotilde, La Réunion Island, France ley fever during rainy seasons, Madagas- imported from Madagascar (9). Since (M. Roger, E. Cardinale); French Agricultural car, 2008 and 2009. Emerg Infect Dis. 2002, importation of live animals Research Center for International 2010;16:963–70. 9. Timmermans E, Ruppol P, Saido A, On- Development (CIRAD), Montpellier, France from Tanzania has been common, clin M. Infl uence du marché international increasing the risk of introducing (M. Roger, S. Girard, C. Cetre-Sossah, E. et des stratégies d’approvisionnement en continental pathogens or vectors Cardinale); CIRAD, Mamoudzou, Mayotte viande sur les risques d’importation de as illustrated with outbreaks of (S. Girard); Vice-President, Ministry of maladies. Le cas de l’ecthyma en Répub- lique Fédérale Islamique des Comores. Agriculture, Fisheries, Environment, East Coast fever in 2003 and 2004 2000 [cited 2010 Dec 1]. http://www.vsf- in Grande Comore (10). RVFV Industry, Energy and Handicraft, Moroni, belgium.org/docs/ecthyma_contagieux. circulation presented in this study Republic of Comoros (A. Faharoudine, M. pdf is another example of the exposure Halifa); and Institut Pasteur, Paris, France 10. De Deken R, Martin V, Saido A, Mad- der M, Brandt J, Geysen D. An outbreak (M. Bouloy) of the Republic of Comoros to of East Coast fever on the Comoros: a emerging pathogens and potentially DOI: 10.3201/eid1707.102031 consequence of the import of immun- bears major consequences for the ised cattle from Tanzania? Vet Parasitol. -
Current Status of the Mammals of Balochistan Author(S)
Pakistan J. Zool., vol. 39(2), pp. 117-122, 2007. Current Status of the Mammals of Balochistan SYED ALI GHALIB, ABDUL JABBAR, ABDUR RAZZAQ KHAN AND AFSHEEN ZEHRA Department of Zoology (Wildlife and Fisheries),University of Karachi, Karachi (SAG, AZ), Forest and Wildlife Department, Government of Balochistan, Uthal (AJ) and Halcrow Pakistan (Pvt) Ltd, Karachi (ARK) Abstract.- Ninety species of mammals of Balochistan have been recorded so far belonging to 9 orders and 27 families; of these, 2lspecies are threatened,4species are endemic to Balochistan, 14 species are of special conservation interest,8 sites are important for mammals. Special efforts are being made to conserve the important mammals particularly in the protected areas specially in Chiltan Hazarganji National Park and the Hingol National Park. Key words: Biodiversity, threatened species, Balochistan, protected areas. INTRODUCTION 0030-9923/2007/0002-0117 $ 8.00/0 Copyright 2007 Zoological Society of Pakistan. al. (2002), Shafiq and Barkati (2002), Khan et al. (2004), Javed and Azam (2005), Khan and Siddiqui Balochistan is the largest province of (2005), Roberts (2005) and Roberts (2005a). Pakistan extending over an area of 350,000 sq.km As many as 2 National Parks, 14 Wildlife and the smallest number of inhabitants about 0.7 Sanctuaries and 8 Game Reserves have been million only. The province lies between 24°32’N established in the Province (Table I).At present, and 60°70’E.The-coast line is about 770 km long. detailed baseline studies on the biodiversity of The east-central and northern part of the province Hingol National Park are being undertaken under has high mountains of which considerable parts the GEF funded project on the Management of reach an elevation of above 2,300 m (7000feet) and Hingol National Park w.e.f. -
Patterns of Skull Variation in Relation to Some Geoclimatic Conditions in the Greater Jerboa Jaculus Orientalis (Rodentia, Dipodidae) from Tunisia
Turkish Journal of Zoology Turk J Zool (2016) 40: 900-909 http://journals.tubitak.gov.tr/zoology/ © TÜBİTAK Research Article doi:10.3906/zoo-1505-25 Patterns of skull variation in relation to some geoclimatic conditions in the greater jerboa Jaculus orientalis (Rodentia, Dipodidae) from Tunisia 1, 1 2 Abderraouf BEN FALEH *, Hassen ALLAYA , Jean Pierre QUIGNARD , 3 1 Adel Abdel Aleem Basyouny SHAHIN , Monia TRABELSI 1 Marine Biology Unit, Faculty of Sciences of Tunis, Tunis El Manar University, Tunis, Tunisia 2 Laboratory of Ichthyology, Montpellier 2 University, Montpellier, France 3 Department of Zoology, Faculty of Science, Minia University, El Minia, Egypt Received: 15.05.2015 Accepted/Published Online: 24.12.2015 Final Version: 06.12.2016 Abstract: The greater Egyptian jerboa Jaculus orientalis is a member of the subfamily Dipodinae and widely distributed in Tunisia. Previous allozymic and karyotypic studies showed high gene flow and absence of genetic structuration. This study aimed to analyze the geographic patterns of cranial morphometric variation among populations of this species in Tunisia. The extent of morphometric patterns was addressed in a survey of 13 craniodental characters among 162 adult specimens collected from 12 localities within its distribution range by using univariate and multivariate statistics. Our results supported the existence of three morphotypes of this species comparable to three climatic zones, the northern, central, and southern regions of Tunisia. The probability of the correct classification of specimens was 99.38%, indicating significant degrees of variation in craniodental characteristics among these three morphotypes. In addition, we tested the effects of age, sex, geography, and some habitat variables (such as precipitation) on the size of the skull. -
New Species of Three-Toed Jerboa (Dipodidae, Rodentia) from the Deserts of Khorasan Province, Iran
Iranian Journal of Animal Biosystematics (IJAB) Vol. 1, No. 1, 29-44, 2005 ISSN: 1735-434X New species of three-toed jerboa (Dipodidae, Rodentia) from the deserts of Khorasan province, Iran 1* 2 JAMSHID DARVISH AND FARAMARZ HOSSEINIE 1. Rodentology Research Department (RRD), Ferdowsi University, Mashhad, Iran 2. Department of Biology, College of Sciences, Shiraz University, Shiraz 71454, Iran The present study introduces, for the first time, the black tail tip three-toed jerboa from the east of the Iranian Plateau. This new species is different from its sympatric species, Jaculus blanfordi, considering the clear black color of the hairs of its tail tip and the two large styles on the glans of the penis. Key words: Three- toed jerboa, new species, Khorasan, Iran, Iranian Plateau. INTRODUCTION Among the rodents collected for the research projects on rodents fauna of east of Iran (years 1996- 2000) - sponsored by National Science Council of Iran, three specimens of three-toed jerboa were found form Kavir-e-Namak, near Kashmar and Bandan in Khorasan Province, which had not been seen nor reported thus far. The specimens were then taken under detailed conventional studies and were found to belong to a new speciesof the genus Jaculus. The three-toed jerboa, Jaculus, is a large– sized jerboa found in desert biotopes. It has two subgenera, Jaculus with one species, J.(J.) jaculus which is without style on glans penis (Didier et Petter , 1960) and Haltomys with three species, J. (H.) lichtensteini, J. (H.) orientalis, and J. (H.) blanfordi (Corbet, 1978), with two styles on glans penis (Shenbrot, 1995) which so far are reported from Turkistan to Western Sahara. -
The Phylogenetic Roots of Human Lethal Violence José María Gómez1,2, Miguel Verdú3, Adela González-Megías4 & Marcos Méndez5
LETTER doi:10.1038/nature19758 The phylogenetic roots of human lethal violence José María Gómez1,2, Miguel Verdú3, Adela González-Megías4 & Marcos Méndez5 The psychological, sociological and evolutionary roots of 600 human populations, ranging from the Palaeolithic era to the present conspecific violence in humans are still debated, despite attracting (Supplementary Information section 9c). The level of lethal violence the attention of intellectuals for over two millennia1–11. Here we was defined as the probability of dying from intraspecific violence propose a conceptual approach towards understanding these roots compared to all other causes. More specifically, we calculated the level based on the assumption that aggression in mammals, including of lethal violence as the percentage, with respect to all documented humans, has a significant phylogenetic component. By compiling sources of mortality, of total deaths due to conspecifics (these sources of mortality from a comprehensive sample of mammals, were infanticide, cannibalism, inter-group aggression and any other we assessed the percentage of deaths due to conspecifics and, type of intraspecific killings in non-human mammals; war, homicide, using phylogenetic comparative tools, predicted this value for infanticide, execution, and any other kind of intentional conspecific humans. The proportion of human deaths phylogenetically killing in humans). predicted to be caused by interpersonal violence stood at 2%. Lethal violence is reported for almost 40% of the studied mammal This value was similar to the one phylogenetically inferred for species (Supplementary Information section 9a). This is probably the evolutionary ancestor of primates and apes, indicating that a an underestimation, because information is not available for many certain level of lethal violence arises owing to our position within species. -
Zapus Hudsonius Luteus) Jennifer K
Variation in phenology of hibernation and reproduction in the endangered New Mexico meadow jumping mouse (Zapus hudsonius luteus) Jennifer K. Frey Department of Fish, Wildlife, and Conservation Ecology, New Mexico State University, Las Cruces, NM, United States of America Frey Biological Research, Radium Springs, NM, United States of America ABSTRACT Hibernation is a key life history feature that can impact many other crucial aspects of a species’ biology, such as its survival and reproduction. I examined the timing of hibernation and reproduction in the federally endangered New Mexico meadow jumping mouse (Zapus hudsonius luteus), which occurs across a broad range of latitudes and elevations in the American Southwest. Data from museum specimens and field studies supported predictions for later emergence and shorter active intervals in montane populations relative to lower elevation valley populations. A low-elevation population located at Bosque del Apache National Wildlife Refuge (BANWR) in the Rio Grande valley was most similar to other subspecies of Z. hudsonius: the first emergence date was in mid-May and there was an active interval of 162 days. In montane populations of Z. h. luteus, the date of first emergence was delayed until mid-June and the active interval was reduced to ca 124–135 days, similar to some populations of the western jumping mouse (Z. princeps). Last date of immergence into hibernation occurred at about the same time in all populations (mid to late October). In montane populations pregnant females are known from July to late August and evidence suggests that they have a single litter per year. At BANWR two peaks in reproduction were expected based Submitted 6 May 2015 on similarity of active season to Z.