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Bioinformatik Und Medizinische Bildverarbeitung Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Bioinformatik und medizinische Historisches Debian Pure Bildverarbeitung Blends Mit Debian Med Aufgaben in Bioinformatik und der Testen für wis- senschaftliche medizinischen Bildverarbeitung lösen Anwendung Support Bioinformatik Andreas Tille Medizinische Bildverarbei- tung Debian Ausblick Chemnitz, 12. März 2017 Bioinformatik und medizinische Bildverarbei- 1 tung Historisches Andreas Tille 2 Debian Pure Blends Historisches Debian Pure Blends 3 Testen für wissenschaftliche Anwendung Testen für wis- senschaftliche Anwendung 4 Support Support Bioinformatik 5 Medizinische Bioinformatik Bildverarbei- tung Ausblick 6 Medizinische Bildverarbeitung 7 Ausblick Bordeaux 2001 DebConf 1 Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Historisches Debian Pure Blends Testen für wis- senschaftliche Anwendung Support Bioinformatik Medizinische Bildverarbei- tung Ausblick Vorbereitung erster Vortrag über Debian Med Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Historisches Debian Pure Blends Testen für wis- senschaftliche Anwendung Support Bioinformatik Medizinische Bildverarbei- tung Ausblick Lektion von DebConf 15 Heidelberg Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Historisches Debian Pure Blends Testen für wis- senschaftliche Anwendung Support I After 15 years people are starting to use what Bioinformatik I’m working on. Medizinische Bildverarbei- John Only 15 years? You young guys should be tung more patient. I should hurry up since after 15 Ausblick years I might be dead but you have so much time. Image by Olaf Kosinsky CC BY-SA 3.0 Lektion von DebConf 15 Heidelberg Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Historisches Debian Pure Blends Testen für wis- senschaftliche Anwendung Support I After 15 years people are starting to use what Bioinformatik I’m working on. Medizinische Bildverarbei- John Only 15 years? You young guys should be tung more patient. I should hurry up since after 15 Ausblick years I might be dead but you have so much time. Image by Olaf Kosinsky CC BY-SA 3.0 Motivation Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Historisches Debian Pure Blends Testen für wis- senschaftliche Anwendung Weil es möglich ist ! Do-ocracy Support Bioinformatik Medizinische Bildverarbei- tung Ausblick Was ist ein ”Paket”? Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Ein Paket ist ein Archiv von Dateien und Metadaten: Historisches sofort lauffähige Software Debian Pure Blends Metainformation zur Definition von Abhängigkeiten Testen für wis- senschaftliche Dokumentation Anwendung Beispiele für die Anwendung Support Bioinformatik Medizinische § Bildverarbei- Installation per Mausklick auf tung beliebiger Anzahl von Computern Ausblick Was ist ein ”Paket”? Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Ein Paket ist ein Archiv von Dateien und Metadaten: Historisches sofort lauffähige Software Debian Pure Blends Metainformation zur Definition von Abhängigkeiten Testen für wis- senschaftliche Dokumentation Anwendung Beispiele für die Anwendung Support Bioinformatik Medizinische § Bildverarbei- Installation per Mausklick auf tung beliebiger Anzahl von Computern Ausblick Was ist ein ”Paket”? Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Ein Paket ist ein Archiv von Dateien und Metadaten: Historisches sofort lauffähige Software Debian Pure Blends Metainformation zur Definition von Abhängigkeiten Testen für wis- senschaftliche Dokumentation Anwendung Beispiele für die Anwendung Support Bioinformatik Medizinische § Bildverarbei- Installation per Mausklick auf tung beliebiger Anzahl von Computern Ausblick Was ist ein ”Paket”? Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Ein Paket ist ein Archiv von Dateien und Metadaten: Historisches sofort lauffähige Software Debian Pure Blends Metainformation zur Definition von Abhängigkeiten Testen für wis- senschaftliche Dokumentation Anwendung Beispiele für die Anwendung Support Bioinformatik Medizinische § Bildverarbei- Installation per Mausklick auf tung beliebiger Anzahl von Computern Ausblick Was ist ein ”Paket”? Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Ein Paket ist ein Archiv von Dateien und Metadaten: Historisches sofort lauffähige Software Debian Pure Blends Metainformation zur Definition von Abhängigkeiten Testen für wis- senschaftliche Dokumentation Anwendung Beispiele für die Anwendung Support Bioinformatik Medizinische § Bildverarbei- Installation per Mausklick auf tung beliebiger Anzahl von Computern Ausblick Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Spezifische Lösungen innerhalb Debian Bioinformatik und medizinische Bildverarbei- Debian > 50000 Pakete tung Andreas Tille Biologen & Mediziner brauchen nur sehr kleine spezifische Untermenge Historisches Debian Pure Leichte Installation + Konfiguration dieser Untermenge Blends ! Testen für wis- Automatische Installation Cloud senschaftliche Anwendung Dokumentation und Metadaten zur Software Support (Publikationen, Screenshots, Übersetzungen) Bioinformatik Vollständig integriert in Debian § kein „Fork“ Medizinische Bildverarbei- tung Ausblick Grundidee: Keine separate Distribution sondern Debian für spezifische Lösungen in Medizin und Biologie anpassen Abhängigkeiten Bioinformatik und medizinische Bildverarbei- tung Andreas Tille Software hängt in der Regel von der Verfügbarkeit Historisches anderer Software ab Debian Pure Blends Beispiele: Testen für wis- Java-Run-Time, gemeinsam genutzter Code senschaftliche (sogenannte Bibliotheken) Anwendung Bioinformatik-Pipeline hängt
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