Cyfip1 Haploinsufficiency Does Not Alter GABAA Receptor Δ-Subunit
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Systems Analysis Implicates WAVE2&Nbsp
JACC: BASIC TO TRANSLATIONAL SCIENCE VOL.5,NO.4,2020 ª 2020 THE AUTHORS. PUBLISHED BY ELSEVIER ON BEHALF OF THE AMERICAN COLLEGE OF CARDIOLOGY FOUNDATION. THIS IS AN OPEN ACCESS ARTICLE UNDER THE CC BY-NC-ND LICENSE (http://creativecommons.org/licenses/by-nc-nd/4.0/). PRECLINICAL RESEARCH Systems Analysis Implicates WAVE2 Complex in the Pathogenesis of Developmental Left-Sided Obstructive Heart Defects a b b b Jonathan J. Edwards, MD, Andrew D. Rouillard, PHD, Nicolas F. Fernandez, PHD, Zichen Wang, PHD, b c d d Alexander Lachmann, PHD, Sunita S. Shankaran, PHD, Brent W. Bisgrove, PHD, Bradley Demarest, MS, e f g h Nahid Turan, PHD, Deepak Srivastava, MD, Daniel Bernstein, MD, John Deanfield, MD, h i j k Alessandro Giardini, MD, PHD, George Porter, MD, PHD, Richard Kim, MD, Amy E. Roberts, MD, k l m m,n Jane W. Newburger, MD, MPH, Elizabeth Goldmuntz, MD, Martina Brueckner, MD, Richard P. Lifton, MD, PHD, o,p,q r,s t d Christine E. Seidman, MD, Wendy K. Chung, MD, PHD, Martin Tristani-Firouzi, MD, H. Joseph Yost, PHD, b u,v Avi Ma’ayan, PHD, Bruce D. Gelb, MD VISUAL ABSTRACT Edwards, J.J. et al. J Am Coll Cardiol Basic Trans Science. 2020;5(4):376–86. ISSN 2452-302X https://doi.org/10.1016/j.jacbts.2020.01.012 JACC: BASIC TO TRANSLATIONALSCIENCEVOL.5,NO.4,2020 Edwards et al. 377 APRIL 2020:376– 86 WAVE2 Complex in LVOTO HIGHLIGHTS ABBREVIATIONS AND ACRONYMS Combining CHD phenotype–driven gene set enrichment and CRISPR knockdown screening in zebrafish is an effective approach to identifying novel CHD genes. -
Characterization of Zebrafish GABAA Receptor Subunits
www.nature.com/scientificreports OPEN Characterization of zebrafsh GABAA receptor subunits Kenichiro Sadamitsu, Leona Shigemitsu, Marina Suzuki, Daishi Ito, Makoto Kashima & Hiromi Hirata* γ-Aminobutyric acid (GABA), the major inhibitory neurotransmitter in the central nervous system, exerts its efect through the activation of GABA receptors. GABAA receptors are ligand-gated chloride channels composed of fve subunit proteins. Mammals have 19 diferent GABAA receptor subunits (α1–6, β1–3, γ1–3, δ, ε, π, θ, and ρ1–3), the physiological properties of which have been assayed by electrophysiology. However, the evolutionary conservation of the physiological characteristics of diverged GABAA receptor subunits remains unclear. Zebrafsh have 23 subunits (α1, α2a, α2b, α3–5, α6a, α6b, β1–4, γ1–3, δ, π, ζ, ρ1, ρ2a, ρ2b, ρ3a, and ρ3b), but the electrophysiological properties of these subunits have not been explored. In this study, we cloned the coding sequences for zebrafsh GABAA receptor subunits and investigated their expression patterns in larval zebrafsh by whole- mount in situ hybridization. We also performed electrophysiological recordings of GABA-evoked currents from Xenopus oocytes injected with one or multiple zebrafsh GABAA receptor subunit cRNAs and calculated the half-maximal efective concentrations (EC50s) for each. Our results revealed the spatial expressions and electrophysiological GABA sensitivities of zebrafsh GABAA receptors, suggesting that the properties of GABAA receptor subunits are conserved among vertebrates. γ-Aminobutyric acid (GABA), the major inhibitory neurotransmitter in the central nervous system of vertebrates, 1 controls the excitability of neural networks mainly through GABA A receptors . Te GABAA receptor mediates two types of inhibition, known as phasic and tonic inhibition2. -
Research Article Microarray-Based Comparisons of Ion Channel Expression Patterns: Human Keratinocytes to Reprogrammed Hipscs To
Hindawi Publishing Corporation Stem Cells International Volume 2013, Article ID 784629, 25 pages http://dx.doi.org/10.1155/2013/784629 Research Article Microarray-Based Comparisons of Ion Channel Expression Patterns: Human Keratinocytes to Reprogrammed hiPSCs to Differentiated Neuronal and Cardiac Progeny Leonhard Linta,1 Marianne Stockmann,1 Qiong Lin,2 André Lechel,3 Christian Proepper,1 Tobias M. Boeckers,1 Alexander Kleger,3 and Stefan Liebau1 1 InstituteforAnatomyCellBiology,UlmUniversity,Albert-EinsteinAllee11,89081Ulm,Germany 2 Institute for Biomedical Engineering, Department of Cell Biology, RWTH Aachen, Pauwelstrasse 30, 52074 Aachen, Germany 3 Department of Internal Medicine I, Ulm University, Albert-Einstein Allee 11, 89081 Ulm, Germany Correspondence should be addressed to Alexander Kleger; [email protected] and Stefan Liebau; [email protected] Received 31 January 2013; Accepted 6 March 2013 Academic Editor: Michael Levin Copyright © 2013 Leonhard Linta et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Ion channels are involved in a large variety of cellular processes including stem cell differentiation. Numerous families of ion channels are present in the organism which can be distinguished by means of, for example, ion selectivity, gating mechanism, composition, or cell biological function. To characterize the distinct expression of this group of ion channels we have compared the mRNA expression levels of ion channel genes between human keratinocyte-derived induced pluripotent stem cells (hiPSCs) and their somatic cell source, keratinocytes from plucked human hair. This comparison revealed that 26% of the analyzed probes showed an upregulation of ion channels in hiPSCs while just 6% were downregulated. -
Assessment of Molecular Action of Direct Gating and Allosteric Modulatory Effects of Carisoprodol (Somartm) on GABA a Receptors
Graduate Theses, Dissertations, and Problem Reports 2015 Assessment of molecular action of direct gating and allosteric modulatory effects of carisoprodol (SomaRTM) on GABA A receptors Manoj Kumar Follow this and additional works at: https://researchrepository.wvu.edu/etd Recommended Citation Kumar, Manoj, "Assessment of molecular action of direct gating and allosteric modulatory effects of carisoprodol (SomaRTM) on GABA A receptors" (2015). Graduate Theses, Dissertations, and Problem Reports. 6022. https://researchrepository.wvu.edu/etd/6022 This Dissertation is protected by copyright and/or related rights. It has been brought to you by the The Research Repository @ WVU with permission from the rights-holder(s). You are free to use this Dissertation in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you must obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This Dissertation has been accepted for inclusion in WVU Graduate Theses, Dissertations, and Problem Reports collection by an authorized administrator of The Research Repository @ WVU. For more information, please contact [email protected]. ASSESSMENT OF MOLECULAR ACTION OF DIRECT GATING AND ALLOSTERIC MODULATORY EFFECTS OF MEPROBAMATE (MILTOWN®) ON GABAA RECEPTORS Manish Kumar, MD, MS Dissertation submitted to the School of Pharmacy at West Virginia University in partial fulfillment of Requirements -
Expression of GABAA Α2-, Β1- And
OPEN Citation: Transl Psychiatry (2013) 3, e303; doi:10.1038/tp.2013.64 & 2013 Macmillan Publishers Limited All rights reserved 2158-3188/13 www.nature.com/tp ORIGINAL ARTICLE Expression of GABAA a2-, b1- and e-receptors are altered significantly in the lateral cerebellum of subjects with schizophrenia, major depression and bipolar disorder SH Fatemi1,2,3, TD Folsom1, RJ Rooney4 and PD Thuras5 There is abundant evidence that dysfunction of the g-aminobutyric acid (GABA)ergic signaling system is implicated in the pathology of schizophrenia and mood disorders. Less is known about the alterations in protein expression of GABA receptor subunits in brains of subjects with schizophrenia and mood disorders. We have previously demonstrated reduced expression of GABAB receptor subunits 1 and 2 (GABBR1 and GABBR2) in the lateral cerebella of subjects with schizophrenia, bipolar disorder and major depressive disorder. In the current study, we have expanded these studies to examine the mRNA and protein expression of 12 GABAA subunit proteins (a1, a2, a3, a5, a6, b1, b2, b3, d, e, g2 and g3) in the lateral cerebella from the same set of subjects with schizophrenia (N ¼ 9–15), bipolar disorder (N ¼ 10–15) and major depression (N ¼ 12–15) versus healthy controls (N ¼ 10–15). We found significant group effects for protein levels of the a2-, b1- and e-subunits across treatment groups. We also found a significant group effect for mRNA levels of the a1-subunit across treatment groups. New avenues for treatment, such as the use of neurosteroids to promote GABA modulation, could potentially ameliorate GABAergic dysfunction in these disorders. -
Ion Channels
UC Davis UC Davis Previously Published Works Title THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Ion channels. Permalink https://escholarship.org/uc/item/1442g5hg Journal British journal of pharmacology, 176 Suppl 1(S1) ISSN 0007-1188 Authors Alexander, Stephen PH Mathie, Alistair Peters, John A et al. Publication Date 2019-12-01 DOI 10.1111/bph.14749 License https://creativecommons.org/licenses/by/4.0/ 4.0 Peer reviewed eScholarship.org Powered by the California Digital Library University of California S.P.H. Alexander et al. The Concise Guide to PHARMACOLOGY 2019/20: Ion channels. British Journal of Pharmacology (2019) 176, S142–S228 THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Ion channels Stephen PH Alexander1 , Alistair Mathie2 ,JohnAPeters3 , Emma L Veale2 , Jörg Striessnig4 , Eamonn Kelly5, Jane F Armstrong6 , Elena Faccenda6 ,SimonDHarding6 ,AdamJPawson6 , Joanna L Sharman6 , Christopher Southan6 , Jamie A Davies6 and CGTP Collaborators 1School of Life Sciences, University of Nottingham Medical School, Nottingham, NG7 2UH, UK 2Medway School of Pharmacy, The Universities of Greenwich and Kent at Medway, Anson Building, Central Avenue, Chatham Maritime, Chatham, Kent, ME4 4TB, UK 3Neuroscience Division, Medical Education Institute, Ninewells Hospital and Medical School, University of Dundee, Dundee, DD1 9SY, UK 4Pharmacology and Toxicology, Institute of Pharmacy, University of Innsbruck, A-6020 Innsbruck, Austria 5School of Physiology, Pharmacology and Neuroscience, University of Bristol, Bristol, BS8 1TD, UK 6Centre for Discovery Brain Science, University of Edinburgh, Edinburgh, EH8 9XD, UK Abstract The Concise Guide to PHARMACOLOGY 2019/20 is the fourth in this series of biennial publications. The Concise Guide provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to the open access knowledgebase source of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. -
The Role of Δ Subunit-Containing Γ-Aminobutyric Acid Type a Receptors
THE ROLE OF δ SUBUNIT-CONTAINING γ-AMINOBUTYRIC ACID TYPE A RECEPTORS IN MEMORY AND SYNAPTIC PLASTICITY by Paul David Whissell A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Institute of Medical Science University of Toronto © Copyright by Paul Whissell, 2014 Paul Whissell The role of δ subunit-containing γ-aminobutyric acid type A receptors in memory and synaptic plasticity Doctor of Philosophy, Institute of Medical Science, University of Toronto, 2014 Abstract Background: Extrasynaptic γ-aminobutyric acid type A receptors that contain the δ subunit (δGABAA receptors) are highly expressed in the dentate gyrus (DG) of the hippocampus, where they generate a tonic conductance that regulates activity. GABAA receptor-dependent signaling regulates memory and neurogenesis in the adult DG; however, the role of δGABAA receptors in these processes is unclear. Accordingly, it was postulated that δGABAA receptors regulate memory and neurogenesis in the DG. Methods: A combination of genetic and pharmacologic techniques was employed. Memory in wild-type (WT) and δ subunit null (Gabrd–/–) mice was assessed using object-place recognition, novel object recognition, contextual discrimination, fear conditioning, fear extinction and water maze tasks. Long-term potentiation, a molecular correlate of memory, was examined using the in vitro hippocampal slice preparation. To ascertain the effects of enhanced δGABAA receptor activity, the receptor-preferring agonist 4,5,6,7- tetrahydroisoxazolo[5,4-c]pyridin-3-ol (THIP; 4 mg/kg) was applied either as a pre-treatment (2 weeks prior to testing) or an acute treatment (30 min prior to testing). Results: Gabrd–/– mice exhibited impaired object-place recognition, novel object recognition and contextual discrimination relative to WT mice. -
Genomic Selection Signatures in Autism Spectrum Disorder Identifies
www.nature.com/scientificreports OPEN Genomic selection signatures in autism spectrum disorder identifes cognitive genomic tradeof and its relevance in paradoxical phenotypes of defcits versus potentialities Anil Prakash1,2 & Moinak Banerjee1* Autism spectrum disorder (ASD) is a heterogeneous neurodevelopmental disorder characterized by paradoxical phenotypes of defcits as well as gain in brain function. To address this a genomic tradeof hypothesis was tested and followed up with the biological interaction and evolutionary signifcance of positively selected ASD risk genes. SFARI database was used to retrieve the ASD risk genes while for population datasets 1000 genome data was used. Common risk SNPs were subjected to machine learning as well as independent tests for selection, followed by Bayesian analysis to identify the cumulative efect of selection on risk SNPs. Functional implication of these positively selected risk SNPs was assessed and subjected to ontology analysis, pertaining to their interaction and enrichment of biological and cellular functions. This was followed by comparative analysis with the ancient genomes to identify their evolutionary patterns. Our results identifed signifcant positive selection signals in 18 ASD risk SNPs. Functional and ontology analysis indicate the role of biological and cellular processes associated with various brain functions. The core of the biological interaction network constitutes genes for cognition and learning while genes in the periphery of the network had direct or indirect impact on brain function. Ancient genome analysis identifed de novo and conserved evolutionary selection clusters. The de-novo evolutionary cluster represented genes involved in cognitive function. Relative enrichment of the ASD risk SNPs from the respective evolutionary cluster or biological interaction networks may help in addressing the phenotypic diversity in ASD. -
Replicated Risk Nicotinic Cholinergic Receptor Genes for Nicotine Dependence
G C A T T A C G G C A T genes Article Replicated Risk Nicotinic Cholinergic Receptor Genes for Nicotine Dependence Lingjun Zuo 1, Rolando Garcia-Milian 2, Xiaoyun Guo 1,3,4,*, Chunlong Zhong 5,*, Yunlong Tan 6, Zhiren Wang 6, Jijun Wang 3, Xiaoping Wang 7, Longli Kang 8, Lu Lu 9,10, Xiangning Chen 11,12, Chiang-Shan R. Li 1 and Xingguang Luo 1,6,* 1 Department of Psychiatry, Yale University School of Medicine, New Haven, CT 06510, USA; [email protected] (L.Z.); [email protected] (C.-S.R.L.) 2 Curriculum & Research Support Department, Cushing/Whitney Medical Library, Yale University School of Medicine, New Haven, CT 06510, USA; [email protected] 3 Shanghai Mental Health Center, Shanghai 200030, China; [email protected] 4 Department of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, CT 06510, USA 5 Department of Neurosurgery, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China 6 Biological Psychiatry Research Center, Beijing Huilongguan Hospital, Beijing 100096, China; [email protected] (Y.T.); [email protected] (Z.W.) 7 Department of Neurology, Shanghai First People’s Hospital, Shanghai Jiao Tong University, Shanghai 200080, China; [email protected] 8 Key Laboratory for Molecular Genetic Mechanisms and Intervention Research on High Altitude Diseases of Tibet Autonomous Region, Xizang Minzu University School of Medicine, Xianyang, Shanxi 712082, China; [email protected] 9 Provincial Key Laboratory for Inflammation and Molecular Drug Target, Medical -
GABA Strikes Down Again in Epilepsy
57 Editorial Page 1 of 12 GABA strikes down again in epilepsy Milena Guazzi, Pasquale Striano Pediatric Neurology and Muscular Diseases Unit, Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, University of Genoa, “G. Gaslini” Institute, Genova, Italy Correspondence to: Pasquale Striano, MD, PhD. Pediatric Neurology and Muscular Diseases Unit, Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, University of Genoa, “G. Gaslini” Institute, Genova, Italy. Email: [email protected]. Provenance: This is an invited Editorial commissioned by Section Editor Zhangyu Zou, MD, PhD (Department of Neurology, Fujian Medical University Union Hospital, Fujian Medical University, Fuzhou, China). Comment on: Butler KM, Moody OA, Schuler E, et al. De novo variants in GABRA2 and GABRA5 alter receptor function and contribute to early- onset epilepsy. Brain 2018. [Epub ahead of print]. Submitted Dec 03, 2018. Accepted for publication Dec 24, 2018. doi: 10.21037/atm.2018.12.55 View this article at: http://dx.doi.org/10.21037/atm.2018.12.55 Disruption of GABA transmission has been associated established epilepsy genes, supporting the link common and with different epilepsy syndromes according to the role rare, severe epilepsies. Moreover, this case-control exome of GABA as the major inhibitory neurotransmitter in the sequencing study revealed an excess of missense variants in central nervous system (CNS) (1). In fact, mutations in genes encoding GABAA receptor subunits through in GGE several genes encoding GABA receptor subunits, including patients and functional assessment of some of these variants GABRA1, GABRA6, GABRB2, GABRB3, GABRG2, and showed loss-of-function mechanism for 4 out of 7 GABRB2 GABRD have been identified in patients ranging from and GABRA5 variants. -
Chloride Channelopathies Rosa Planells-Cases, Thomas J
Chloride channelopathies Rosa Planells-Cases, Thomas J. Jentsch To cite this version: Rosa Planells-Cases, Thomas J. Jentsch. Chloride channelopathies. Biochimica et Biophysica Acta - Molecular Basis of Disease, Elsevier, 2009, 1792 (3), pp.173. 10.1016/j.bbadis.2009.02.002. hal- 00501604 HAL Id: hal-00501604 https://hal.archives-ouvertes.fr/hal-00501604 Submitted on 12 Jul 2010 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. ÔØ ÅÒÙ×Ö ÔØ Chloride channelopathies Rosa Planells-Cases, Thomas J. Jentsch PII: S0925-4439(09)00036-2 DOI: doi:10.1016/j.bbadis.2009.02.002 Reference: BBADIS 62931 To appear in: BBA - Molecular Basis of Disease Received date: 23 December 2008 Revised date: 1 February 2009 Accepted date: 3 February 2009 Please cite this article as: Rosa Planells-Cases, Thomas J. Jentsch, Chloride chan- nelopathies, BBA - Molecular Basis of Disease (2009), doi:10.1016/j.bbadis.2009.02.002 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. -
Distinct Diagnostic and Prognostic Values of Γ‑Aminobutyric Acid Type a Receptor Family Genes in Patients with Colon Adenocarcinoma
ONCOLOGY LETTERS 20: 275-291, 2020 Distinct diagnostic and prognostic values of γ‑aminobutyric acid type A receptor family genes in patients with colon adenocarcinoma LING YAN1, YI‑ZHEN GONG1, MENG‑NAN SHAO2, GUO‑TIAN RUAN1, HAI‑LUN XIE1, XI‑WEN LIAO3, XIANG‑KUN WANG3, QUAN‑FA HAN3, XIN ZHOU3, LI‑CHENG ZHU4, FENG GAO1 and JIA‑LIANG GAN1 1Department of Colorectal and Anal Surgery, The First Affiliated Hospital of Guangxi Medical University; 2Life Sciences Institute, Guangxi Medical University; 3Department of Hepatobiliary Surgery, The First Affiliated Hospital of Guangxi Medical University; 4Department of Immunology, School of Preclinical Medicine, Guangxi Medical University, Nanning, Guangxi Zhuang Autonomous Region 530021, P.R. China Received July 11, 2019; Accepted February 7, 2020 DOI: 10.3892/ol.2020.11573 Abstract. In the present study, the significance of GABAA of cell matrix adhesion, integrin binding, angiogenesis, endo- genes in colon adenocarcinoma (COAD) were investigated thelial growth factor and endothelial migration regulation in from the view of diagnosis and prognosis. All data were patients with COAD with GABRD overexpression. GABRB1, achieved from The Cancer Genome Atlas. Overall survival GABRD, GABRP and GABRQ were associated with the was analyzed by the Kaplan‑Meier analyses and Cox prognostic factors of COAD. The expression levels of regression model and the hazard ratios and 95% confidence GABRA2, GABRA3, GABRB2, GABRB3, GABRG2, GABRD interval were calculated for computation. The Database for and GABRE may allow differentiation between tumor tissues Annotation, Visualization and Integrated Discovery, and the and adjacent normal tissues. Biological Networks Gene Ontology (BiNGO) softwares were applied to assess the biological processes and Kyoto Introduction Encyclopedia of Genes and Genomes (KEGG) was used for pathway analysis to predict the biological function of GABAA Colorectal cancer (CRC) is a type of malignant tumor origi- genes.