Fisheries Ecology and Oceanography
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Biodiversity of Arctic Marine Fishes: Taxonomy and Zoogeography
Mar Biodiv DOI 10.1007/s12526-010-0070-z ARCTIC OCEAN DIVERSITY SYNTHESIS Biodiversity of arctic marine fishes: taxonomy and zoogeography Catherine W. Mecklenburg & Peter Rask Møller & Dirk Steinke Received: 3 June 2010 /Revised: 23 September 2010 /Accepted: 1 November 2010 # Senckenberg, Gesellschaft für Naturforschung and Springer 2010 Abstract Taxonomic and distributional information on each Six families in Cottoidei with 72 species and five in fish species found in arctic marine waters is reviewed, and a Zoarcoidei with 55 species account for more than half list of families and species with commentary on distributional (52.5%) the species. This study produced CO1 sequences for records is presented. The list incorporates results from 106 of the 242 species. Sequence variability in the barcode examination of museum collections of arctic marine fishes region permits discrimination of all species. The average dating back to the 1830s. It also incorporates results from sequence variation within species was 0.3% (range 0–3.5%), DNA barcoding, used to complement morphological charac- while the average genetic distance between congeners was ters in evaluating problematic taxa and to assist in identifica- 4.7% (range 3.7–13.3%). The CO1 sequences support tion of specimens collected in recent expeditions. Barcoding taxonomic separation of some species, such as Osmerus results are depicted in a neighbor-joining tree of 880 CO1 dentex and O. mordax and Liparis bathyarcticus and L. (cytochrome c oxidase 1 gene) sequences distributed among gibbus; and synonymy of others, like Myoxocephalus 165 species from the arctic region and adjacent waters, and verrucosus in M. scorpius and Gymnelus knipowitschi in discussed in the family reviews. -
Alaska Arctic Marine Fish Ecology Catalog
Prepared in cooperation with Bureau of Ocean Energy Management, Environmental Studies Program (OCS Study, BOEM 2016-048) Alaska Arctic Marine Fish Ecology Catalog Scientific Investigations Report 2016–5038 U.S. Department of the Interior U.S. Geological Survey Cover: Photographs of various fish studied for this report. Background photograph shows Arctic icebergs and ice floes. Photograph from iStock™, dated March 23, 2011. Alaska Arctic Marine Fish Ecology Catalog By Lyman K. Thorsteinson and Milton S. Love, editors Prepared in cooperation with Bureau of Ocean Energy Management, Environmental Studies Program (OCS Study, BOEM 2016-048) Scientific Investigations Report 2016–5038 U.S. Department of the Interior U.S. Geological Survey U.S. Department of the Interior SALLY JEWELL, Secretary U.S. Geological Survey Suzette M. Kimball, Director U.S. Geological Survey, Reston, Virginia: 2016 For more information on the USGS—the Federal source for science about the Earth, its natural and living resources, natural hazards, and the environment—visit http://www.usgs.gov or call 1–888–ASK–USGS. For an overview of USGS information products, including maps, imagery, and publications, visit http://store.usgs.gov. Disclaimer: This Scientific Investigations Report has been technically reviewed and approved for publication by the Bureau of Ocean Energy Management. The information is provided on the condition that neither the U.S. Geological Survey nor the U.S. Government may be held liable for any damages resulting from the authorized or unauthorized use of this information. The views and conclusions contained in this document are those of the authors and should not be interpreted as representing the opinions or policies of the U.S. -
RACE Species Codes and Survey Codes 2018
Alaska Fisheries Science Center Resource Assessment and Conservation Engineering MAY 2019 GROUNDFISH SURVEY & SPECIES CODES U.S. Department of Commerce | National Oceanic and Atmospheric Administration | National Marine Fisheries Service SPECIES CODES Resource Assessment and Conservation Engineering Division LIST SPECIES CODE PAGE The Species Code listings given in this manual are the most complete and correct 1 NUMERICAL LISTING 1 copies of the RACE Division’s central Species Code database, as of: May 2019. This OF ALL SPECIES manual replaces all previous Species Code book versions. 2 ALPHABETICAL LISTING 35 OF FISHES The source of these listings is a single Species Code table maintained at the AFSC, Seattle. This source table, started during the 1950’s, now includes approximately 2651 3 ALPHABETICAL LISTING 47 OF INVERTEBRATES marine taxa from Pacific Northwest and Alaskan waters. SPECIES CODE LIMITS OF 4 70 in RACE division surveys. It is not a comprehensive list of all taxa potentially available MAJOR TAXONOMIC The Species Code book is a listing of codes used for fishes and invertebrates identified GROUPS to the surveys nor a hierarchical taxonomic key. It is a linear listing of codes applied GROUNDFISH SURVEY 76 levelsto individual listed under catch otherrecords. codes. Specifically, An individual a code specimen assigned is to only a genus represented or higher once refers by CODES (Appendix) anyto animals one code. identified only to that level. It does not include animals identified to lower The Code listing is periodically reviewed -
American Museum Novitates
AMERICAN MUSEUM NOVITATES Number 3967, 12 pp. March 18, 2021 First Report of Biofluorescence in Arctic Snailfishes and Rare Occurrence of Multiple Fluorescent Colors in a Single Species DAVID F. GRUBER1, 2, 3 AND JOHN S. SPARKS3, 4 ABSTRACT Biofluorescence has recently been reported to be phylogenetically widespread and phenotypi- cally variable across bony fishes, and is most common in tropical coral reef lineages. Here we provide the first documentation of prominent biofluorescence in Arctic fishes including two juvenile specimens of Liparis gibbus (variegated snailfish) collected from the coastal waters of Eastern Greenland, as well as an adult L. tunicatus (kelp snailfish) collected in the Bering Strait off of Little Diomede Island, AK. Observations of L. gibbus were made during nighttime dives within kelp forests in iceberg habitats in Southeastern Greenland in August 2019. The juvenile L. gibbus specimens exhibit both green (523–530 nm) and red (674–678 nm) biofluorescence on discrete anatomical areas, which provides a rare example of multiple fluorescent colors emitted from a single individual. Notably, the adult L. tunicatus emitted only red fluorescence in a bilater- ally symmetrical pattern of discrete red dots and blotches. Potential weak green biofluorescence was also noted in a flatfish (Hippoglossoides platessoides) collected in Greenland, but in no other Arctic species. As the distribution and function of biofluorescence in marine fishes is further examined, this report adds context to its widespread geographical and environmental distribu- tions, and shows that, although rare, biofluorescence does occur in Arctic fish lineages. 1 Department of Natural Sciences, Baruch College and the Graduate Center, City University of New York. -
Viewed Hydrostatic Pressures in the Deep Sea Reach More Than by [92])
Gerringer et al. Frontiers in Zoology (2021) 18:16 https://doi.org/10.1186/s12983-021-00399-9 RESEARCH Open Access Habitat influences skeletal morphology and density in the snailfishes (family Liparidae) M. E. Gerringer1* , A. S. Dias2, A. A. von Hagel3, J. W. Orr4, A. P. Summers5 and S. Farina6 Abstract We tested the hypothesis that deep-sea fishes have poorly mineralized bone relative to shallower-dwelling species using data from a single family that spans a large depth range. The family Liparidae (snailfishes, Cottiformes) has representatives across the entire habitable depth range for bony fishes (0 m–> 8000 m), making them an ideal model for studying depth-related trends in a confined phylogeny. We used micro-computed tomography (micro- CT) scanning to test three aspects of skeletal reduction in snailfishes (50 species) across a full range of habitat depths: 1) reduction of structural dimensions, 2) loss of skeletal elements, and 3) reduction in bone density. Using depth data from the literature, we found that with increasing depth, the length of the dentary, neurocranium, and suborbital bones decreases. The ventral suction disk decreases width with increasing maximum habitat depth and is lost entirely in some deeper-living taxa, though not all. Although visual declines in bone density in deeper-living taxa were evident across full skeletons, individual densities of the lower jaw, vertebra, suction disk, hypural plate, and otoliths did not significantly decline with any depth metric. However, pelagic and polar taxa tended to show lower density bones compared to other species in the family. We propose that skeletal reductions allow snailfishes to maintain neutral buoyancy at great depths in the water column, while supporting efficient feeding and locomotion strategies. -
New Insights Into the Organization and Evolution of Vertebrate IRBP Genes
Molecular Phylogenetics and Evolution 48 (2008) 258–269 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev New insights into the organization and evolution of vertebrate IRBP genes and utility of IRBP gene sequences for the phylogenetic study of the Acanthomorpha (Actinopterygii: Teleostei) Agnès Dettaï *, Guillaume Lecointre UMR 7138 ‘‘Systématique, Adaptation, Evolution”, Département Systématique et Evolution, CP26, Muséum National d’Histoire Naturelle, 57 rue Cuvier, Case Postale 26, 75231 Paris Cedex 05, France article info abstract Article history: The interphotoreceptor retinoid-binding protein (IRBP) coding gene has been used with success for the Received 20 November 2007 large-scale phylogeny of mammals. However, its phylogenetic worth had not been explored in Actinop- Revised 1 April 2008 terygians. We explored the evolution of the structure of the gene and compared the structure predicted Accepted 1 April 2008 from known sequences with that of a basal vertebrate lineage, the sea lamprey Petromyzon marinus. This Available online 11 April 2008 sequence is described here for the first time. The structure made up of four tandem repeats (or modules) arranged in a single gene, as present in Chondrichthyes (sharks and rays) and tetrapods, is also present in Keywords: sea lamprey. In teleosts, one to two paralogous copies of IRBP gene have been identified depending on the Molecular phylogeny genomes. When the sequences from all modules for a wide sampling of vertebrates are compared and Teleostei Acanthomorpha analyzed, all sequences previously assigned to a particular module appear to be clustered together, sug- IRBP gesting that the divergence among modules is older than the split between lampreys and other verte- Interphotoreceptor retinoid-binding protein brates. -
Alaska Arctic Marine Fish Ecology Catalog
Prepared in cooperation with Bureau of Ocean Energy Management, Environmental Studies Program (OCS Study, BOEM 2016-048) Alaska Arctic Marine Fish Ecology Catalog Scientific Investigations Report 2016–5038 U.S. Department of the Interior U.S. Geological Survey Cover: Photographs of various fish studied for this report. Background photograph shows Arctic icebergs and ice floes. Photograph from iStock™, dated March 23, 2011. Alaska Arctic Marine Fish Ecology Catalog By Lyman K. Thorsteinson and Milton S. Love, editors Prepared in cooperation with Bureau of Ocean Energy Management, Environmental Studies Program (OCS Study, BOEM 2016-048) Scientific Investigations Report 2016–5038 U.S. Department of the Interior U.S. Geological Survey U.S. Department of the Interior SALLY JEWELL, Secretary U.S. Geological Survey Suzette M. Kimball, Director U.S. Geological Survey, Reston, Virginia: 2016 For more information on the USGS—the Federal source for science about the Earth, its natural and living resources, natural hazards, and the environment—visit http://www.usgs.gov or call 1–888–ASK–USGS. For an overview of USGS information products, including maps, imagery, and publications, visit http://store.usgs.gov. Disclaimer: This Scientific Investigations Report has been technically reviewed and approved for publication by the Bureau of Ocean Energy Management. The information is provided on the condition that neither the U.S. Geological Survey nor the U.S. Government may be held liable for any damages resulting from the authorized or unauthorized use of this information. The views and conclusions contained in this document are those of the authors and should not be interpreted as representing the opinions or policies of the U.S. -
Molecular Phylogenetics of Snailfishes (Cottoidei: Liparidae) Based on Mtdna and Radseq Genomic Analyses, with Comments on Selected Morphological Characters
Zootaxa 4642 (1): 001–079 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Monograph ZOOTAXA Copyright © 2019 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4642.1.1 http://zoobank.org/urn:lsid:zoobank.org:pub:42548CEC-E20A-425A-AD8B-5EED9F9DF063 ZOOTAXA 4642 Molecular phylogenetics of snailfishes (Cottoidei: Liparidae) based on MtDNA and RADseq genomic analyses, with comments on selected morphological characters JAMES WILDER ORR1, INGRID SPIES2, DUANE E. STEVENSON3, GARY C. LONGO4, YOSHIAKI KAI5, SAM GHODS6 & MYLES HOLLOWED7 1NOAA, National Marine Fisheries Service, Alaska Fisheries Science Center, RACE Division, 7600 Sand Point Way NE, Seattle, Washington, 98115, U.S.A. E-mail: [email protected] 2NOAA, National Marine Fisheries Service, Alaska Fisheries Science Center, REFM Division, 7600 Sand Point Way NE, Seattle, Washington, 98115, U.S.A. E-mail: [email protected] 3NOAA, National Marine Fisheries Service, Alaska Fisheries Science Center, RACE and FMA Divisions, 7600 Sand Point Way NE, Seattle, Washington, 98115, U.S.A. E-mail: [email protected] 4NOAA, National Marine Fisheries Service, Northwest Fisheries Science Center, 2725 Montlake Boulevard East, Seattle, Washing- ton, 98112, U.S.A. E-mail: [email protected] 5Maizuru Fisheries Research Station, Field Science Education and Research Center, Kyoto University, Nagahama, Maizuru, Kyoto 625-0086, Japan. E-mail: [email protected] 6School of Aquatic and Fishery Sciences, and Burke Museum of Natural History and Culture, University of Washington, Seattle, Washington, 98195, U.S.A. E-mail: [email protected] 7School of Aquatic and Fishery Sciences, and Burke Museum of Natural History and Culture, University of Washington, Seattle, Washington, 98195, U.S.A. -
Liparidae Scopoli 1777 Snailfishes
ISSN 1545-150X California Academy of Sciences A N N O T A T E D C H E C K L I S T S O F F I S H E S Number 31 February 2004 Family Liparidae Scopoli 1777 snailfishes By Natalia V. Chernova1, David L. Stein2, Anatole P. Andriashev1 1Laboratory of Ichthyology, Zoological Institute, Russian Academy of Sciences Universitetskaya nab. 1, St. Petersburg, 199034 Russia email: [email protected] (NVC); [email protected] (APA) 2National Marine Fisheries Service Systematics Laboratory, P.O. Box 37012, National Museum of Natural History MRC 0153, Washington, D.C. 20013 email: [email protected] Snailfishes are a large and morphologically diverse family of marine fishes in the order Scorpaeniformes. This checklist treats 334 species and 29 genera as valid, but much work remains to be done on the taxonomy and these numbers will continue to change. Many snailfish taxa are uncommon or rare, and new species are frequently described. In snailfishes the pelvic fins are modified to form a ventral sucking disk, which may be reduced or lost in deep-sea and pelagic forms. They lack scales, and the skin is soft and frequently contains a more or less thick gelatinous layer that may have a buoyancy function. The cephalic pore system is well developed in snailfishes, but they usually lack a lateral line canal and pores; many species have free neuromasts either in place of a lateral line or scattered over the body. Maximum known length is about 80 cm (31.5 in), but usually they are 20–30 cm (8–12 in) or shorter; dwarf species having adult females about 1 cm (0.4 in) in length are known. -
Aspidophoroides Monopterygius (Bloch, 1786) Agonidae Alligatorfish
982 Aspidophoroides monopterygius (Bloch, 1786) Agonidae Alligatorfish Range: Arctic to northern Pacific and Atlantic oceans; in the western North Atlantic Meristic Characters Ocean from Greenland to Cape Cod, widespread on Grand Bank, northern Myomeres: 48–52 and western Gulf of Maine, northeast Georges Bank; rarely occurring as far Vertebrae: 48–52 south as New Jersey Dorsal fin rays: 5–6 Anal fin rays: 5–6 Habitat: Benthic in depths of 18–332 m over sandy or muddy substrates, also pebbly Pectoral fin rays: 10–11 bottoms or those with broken shell; larvae have been collected in brackish as Pelvic fin rays: I, 2 well as highly oceanic waters Caudal fin rays: 5+5 Spawning: Not well described; larvae present in Gulf of Maine and Salem Harbor (Massachusetts) during spring Eggs: – Undescribed; those of other species demersal, large, deposited in clumps under rocks Larvae: – Body very elongate, with preanus length <50% SL – Head elongate, with pointy snout, somewhat concave profile, mouth only reaching anterior edge of eye – Series of spines on top of head; see checklist below – Note constriction, or 'loop', in mid-gut, with anus and terminus of gut semi-trailing – Pectoral fin early forming, large and fan-shaped – Dorsal and anal fins short-based, opposite each other; single dorsal fin situated at the halfway point of body – Caudal fin small and rounded – Rows of tiny spines form along the body; these correspond to rows of plates (modified scales) in adults – Pigmentation includes a characteristic series of blotches along the body, ending -
Beaufort Sea Fish and Their Trophic Linkages: Literature Search and Synthesis
BOEMRE 2011-021 Beaufort Sea Fish and their Trophic Linkages: Literature Search and Synthesis School of Fisheries and Ocean Sciences University of Alaska Fairbanks 17101 Point Lena Loop Road, Juneau, AK 99801 BOEMRE 2011-021 Beaufort Sea Fish and their Trophic Linkages: Literature Search and Synthesis Jodi L. Pirtle and Franz J. Mueter School of Fisheries and Ocean Sciences University of Alaska Fairbanks 17101 Point Lena Loop Road, Juneau, AK 99801 July 2011 Prepared for Bureau of Ocean Energy Management, Regulation and Enforcement Alaska Environmental Studies Program U.S. Department of the Interior 3801 Centerpoint Drive, Suite 500 Anchorage, AK 99503-5823 Study design, oversight, and funding were provided by the US Department of the Interior, Bureau of Ocean Energy Management, Regulation and Enforcement, Alaska Environmental Studies Program under Agreement Number M10PX00304. This report has been reviewed by the BOEMRE and approved for publication. Approval does not signify that the contents necessarily reflect the views and policies of the Service, nor does mention of trade names or commercial products constitute endorsement or recommendation for use. Table of Contents Page List of Tables ................................................................................................................................ ii List of Figures ............................................................................................................................... ii List of Appendices ....................................................................................................................... -
Scr13-005.Pdf
Northwest Atlantic Fisheries Organization Serial No. N6154 NAFO SCR Doc. 13/005 SCIENTIFIC COUNCIL MEETING – JUNE 2013 List of Species as recorded by Canadian and EU Bottom Trawl Surveys in Flemish Cap by Antonio Vázquez1, José Miguel Casas2, William B. Brodie3, Francisco Javier Murillo2, Mónica Mandado1, Ana Gago2, Ricardo Alpoim4, Rafael Bañón5, and Ángeles Armesto2 1 Instituto de Investigaciones Marinas, Muelle de Bouzas, Vigo, Spain. 2 Instituto Español de Oceanografía, Apdo. 1552, 36200 Vigo, Spain. 3 Fisheries & Oceans Canada, P.O. Box 5667, St. John's, NL, Canada. 4 Instituto Português do Mar e da Atmosfera. Av. Brasília 1400 Lisboa, Portugal. 5 Consellería do Mar e Medio Rural, Santiago de Compostela, Spain. Abstract A list of species has been prepared with all records in each haul of both Canadian (1977-1985) and EU (1988-2002 and 2003-2012) bottom trawl surveys. Even though sampling intensity and taxonomic interest changed with time, the three periods can be considered almost homogeneous. Main change occurred when the EU survey increased the depth range, from 730 to 1460 meters depth, and all invertebrates were recorded. Material and methods Table 1 contains percentage of hauls in which each species has been recorded in each survey, but three periods are identified: 1977-1985: Canadian bottom-trawl surveys (Wells and Baird 1989) on board RV A.T. Cameron (1977) and RV Gadus Atlantica (1978-1985). 1988-2002: EU bottom-trawl survey up to 730 m depth on board RV Cornide de Saavedra – period indicated in light grey in Table 1. 2003-2012: EU bottom-trawl survey up to 1460 m depth on board RV Vizconde de Eza, and emphasis in benthonic invertebrates.