SUBMISSION from SPRINGER NATURE Making Plan S Successful
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Plan S in Latin America: a Precautionary Note
Plan S in Latin America: A precautionary note Humberto Debat1 & Dominique Babini2 1Instituto Nacional de Tecnología Agropecuaria (IPAVE-CIAP-INTA), Argentina, ORCID id: 0000-0003-3056-3739, [email protected] 2Consejo Latinoamericano de Ciencias Sociales (CLACSO), Argentina. ORCID id: 0000-0002- 5752-7060, [email protected] Latin America has historically led a firm and rising Open Access movement and represents the worldwide region with larger adoption of Open Access practices. Argentina has recently expressed its commitment to join Plan S, an initiative from a European consortium of research funders oriented to mandate Open Access publishing of scientific outputs. Here we suggest that the potential adhesion of Argentina or other Latin American nations to Plan S, even in its recently revised version, ignores the reality and tradition of Latin American Open Access publishing, and has still to demonstrate that it will encourage at a regional and global level the advancement of non-commercial Open Access initiatives. Plan S is an initiative from a European consortium of research funders, with the intention of becoming international, oriented to mandate Open Access publishing of research outputs funded by public or private grants, starting from 2021. Launched in September 2018 and revised in May 2019, the plan supported by the so-called cOAlition S involves 10 principles directed to achieve scholarly publishing in “Open Access Journals, Open Access Platforms, or made immediately available through Open Access Repositories without embargo” [1]. cOAlition S, coordinated by Science Europe and comprising 16 national research funders, three charitable foundations and the European Research Council, has pledged to coordinately implement the 10 principles of Plan S in 2021. -
Evidence for Excellence: Has the Signal Overtaken the Substance? an Analysis of Journal Articles Submitted to RAE2008
Digital Research Reports Evidence for excellence: has the signal overtaken the substance? An analysis of journal articles submitted to RAE2008 Jonathan Adams & Karen A Gurney JUNE 2014 About the Authors Jonathan Adams joined Digital Science as Chief Scientist in October 2013. Previously he was the lead founder of Evidence Ltd (2000-2009) and Director of Re- search Evaluation for Thomson Reuters (2009-2013). Jonathan led the 2008 review of research evaluation in New Zealand and was a member of the Australian Research Council (ARC) indicators development group for its research excellence assessment (ERA). In 2004 he chaired the EC Evaluation Monitoring Committee for Framework Programme 6. In 2006 he chaired the Monitoring Group of the European Research Fund for Coal & Steel. In 2010 he was an Expert Advisor to the interim evaluation of the EU's 7th Framework Programme for Research (FP7). Karen Gurney was a co-founder of Evidence Ltd (2000-2009) and led the UK-based research evaluation arm of Thomson Reuters (2009-2013). She is now at Sheffield Hallam University. Karen has managed research evaluation projects for companies and research-funding agencies in Europe, North America and Asia-Pacific. She is an Associ- ate of the Royal College of Science and has a specialist background in biomedical sci- ences, having worked with Leukaemia Research Fund and the Paediatric Epidemiology Group at the University of Leeds. Karen has published extensively in science journals as well as research policy. About Digital Science Digital Science is a technology company serving the needs of scientific research. We offer a range of scientific technology and content solutions that help make sci- entific research more efficient. -
Revealing the Immune Perturbation of Black Phosphorus Nanomaterials to Macrophages by Understanding the Protein Corona
ARTICLE DOI: 10.1038/s41467-018-04873-7 OPEN Revealing the immune perturbation of black phosphorus nanomaterials to macrophages by understanding the protein corona Jianbin Mo 1,2, Qingyun Xie3, Wei Wei 1,2 & Jing Zhao 1 The increasing number of biological applications for black phosphorus (BP) nanomaterials has precipitated considerable concern about their interactions with physiological systems. 1234567890():,; Here we demonstrate the adsorption of plasma protein onto BP nanomaterials and the subsequent immune perturbation effect on macrophages. Using liquid chromatography tandem mass spectrometry, 75.8% of the proteins bound to BP quantum dots were immune relevant proteins, while that percentage for BP nanosheet–corona complexes is 69.9%. In particular, the protein corona dramatically reshapes BP nanomaterial–corona complexes, influenced cellular uptake, activated the NF-κB pathway and even increased cytokine secretion by 2–4-fold. BP nanomaterials induce immunotoxicity and immune per- turbation in macrophages in the presence of a plasma corona. These findings offer important insights into the development of safe and effective BP nanomaterial-based therapies. 1 State Key Laboratory of Coordination Chemistry, Institute of Chemistry and BioMedical Sciences, School of Chemistry and Chemical Engineering Nanjing University, Nanjing 210093, China. 2 State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210093, China. 3 Department of Orthopedics, Chengdu Military General Hospital, Chengdu -
Sci-Hub Provides Access to Nearly All Scholarly Literature
Sci-Hub provides access to nearly all scholarly literature A DOI-citable version of this manuscript is available at https://doi.org/10.7287/peerj.preprints.3100. This manuscript was automatically generated from greenelab/scihub-manuscript@51678a7 on October 12, 2017. Submit feedback on the manuscript at git.io/v7feh or on the analyses at git.io/v7fvJ. Authors • Daniel S. Himmelstein 0000-0002-3012-7446 · dhimmel · dhimmel Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania · Funded by GBMF4552 • Ariel Rodriguez Romero 0000-0003-2290-4927 · arielsvn · arielswn Bidwise, Inc • Stephen Reid McLaughlin 0000-0002-9888-3168 · stevemclaugh · SteveMcLaugh School of Information, University of Texas at Austin • Bastian Greshake Tzovaras 0000-0002-9925-9623 · gedankenstuecke · gedankenstuecke Department of Applied Bioinformatics, Institute of Cell Biology and Neuroscience, Goethe University Frankfurt • Casey S. Greene 0000-0001-8713-9213 · cgreene · GreeneScientist Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania · Funded by GBMF4552 PeerJ Preprints | https://doi.org/10.7287/peerj.preprints.3100v2 | CC BY 4.0 Open Access | rec: 12 Oct 2017, publ: 12 Oct 2017 Abstract The website Sci-Hub provides access to scholarly literature via full text PDF downloads. The site enables users to access articles that would otherwise be paywalled. Since its creation in 2011, Sci- Hub has grown rapidly in popularity. However, until now, the extent of Sci-Hub’s coverage was unclear. As of March 2017, we find that Sci-Hub’s database contains 68.9% of all 81.6 million scholarly articles, which rises to 85.2% for those published in toll access journals. -
From Coalition to Commons: Plan S and the Future of Scholarly Communication
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Copyright, Fair Use, Scholarly Communication, etc. Libraries at University of Nebraska-Lincoln 2019 From Coalition to Commons: Plan S and the Future of Scholarly Communication Rob Johnson Research Consulting Follow this and additional works at: https://digitalcommons.unl.edu/scholcom Part of the Intellectual Property Law Commons, Scholarly Communication Commons, and the Scholarly Publishing Commons Johnson, Rob, "From Coalition to Commons: Plan S and the Future of Scholarly Communication" (2019). Copyright, Fair Use, Scholarly Communication, etc.. 157. https://digitalcommons.unl.edu/scholcom/157 This Article is brought to you for free and open access by the Libraries at University of Nebraska-Lincoln at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Copyright, Fair Use, Scholarly Communication, etc. by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Insights – 32, 2019 Plan S and the future of scholarly communication | Rob Johnson From coalition to commons: Plan S and the future of scholarly communication The announcement of Plan S in September 2018 triggered a wide-ranging debate over how best to accelerate the shift to open access. The Plan’s ten principles represent a call for the creation of an intellectual commons, to be brought into being through collective action by funders and managed through regulated market mechanisms. As it gathers both momentum and critics, the coalition must grapple with questions of equity, efficiency and sustainability. The work of Elinor Ostrom has shown that successful management of the commons frequently relies on polycentricity and adaptive governance. The Plan S principles must therefore function as an overarching framework within which local actors retain some autonomy, and should remain open to amendment as the scholarly communication landscape evolves. -
March 13, 2019 AMS Primer on Open Access
Robert M. Harington Associate Executive Director, Publishing Publishing Division [email protected] 401.455.4165 401.331.3842 www.ams.org AMS Primer on Open Access Introduction Open access (OA) refers to published scholarly content (such as journal research articles, and books) made openly available in online digital form. This content is free of charge at point of use, free of most copyright and licensing restrictions, and free of technical or other barriers to access (such as digital rights management or requirements to register to access). Communicating and sharing discoveries is an essential part of the research process. Any author of a research paper wants it to be read, and the fewer restrictions placed on access to those papers means that more people may benefit from the research. In many ways, the OA movement is very much in line with the shared mission of researchers, scholarly societies, and publishers. Journal publishing programs perform many services for researchers including peer review, communication, and career advancement. In society publishing programs, revenue from journal publishing directly supports the important work societies do on behalf of their scholarly communities. How do we maximize the dissemination of knowledge while at the same time maintaining both a high level of quality and a sustainable financial future for our professional society, the AMS? The OA movement can be traced to a letter from the year 2000, signed by around 34,000 researchers, demanding publishers make all content free after 6 months. The signatories of the letter said they would boycott any journals refusing to comply. In 2002, the accepted definition of OA was encapsulated in the Budapest Open Access Initiative declaration. -
Arxiv:2011.06772V5 [Cs.GT] 19 May 2021
Memory-two zero-determinant strategies in repeated games 1 rsos.royalsocietypublishing.org Masahiko Ueda 1Graduate School of Sciences and Technology for Research Innovation, Yamaguchi University, Yamaguchi 753-8511, Japan Article submitted to journal Repeated games have provided an explanation how mutual cooperation can be achieved even if defection is more favorable in a one-shot game in prisoner’s Subject Areas: dilemma situation. Recently found zero-determinant Game theory strategies have substantially been investigated in evolutionary game theory. The original memory-one Keywords: zero-determinant strategies unilaterally enforce linear Repeated games, Zero-determinant relations between average payoffs of players. Here, we strategies, memory-n strategies extend the concept of zero-determinant strategies to memory-two strategies in repeated games. Memory- two zero-determinant strategies unilaterally enforce Author for correspondence: linear relations between correlation functions of Masahiko Ueda payoffs and payoffs at the previous round. Examples e-mail: [email protected] of memory-two zero-determinant strategy in the repeated prisoner’s dilemma game are provided, some of which generalize the Tit-for-Tat strategy to memory-two case. Extension of zero-determinant strategies to memory-n case with n ≥ 2 is also straightforward. arXiv:2011.06772v5 [cs.GT] 19 May 2021 © 2014 The Authors. Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/ by/4.0/, which permits unrestricted use, provided the original author and source are credited. 1. Introduction 2 Repeated games offer a framework explaining forward-looking behaviors and reciprocity of rsos.royalsocietypublishing.org R. Soc. -
Ten Simple Rules for Scientific Fraud & Misconduct
Ten Simple Rules for Scientic Fraud & Misconduct Nicolas P. Rougier1;2;3;∗ and John Timmer4 1INRIA Bordeaux Sud-Ouest Talence, France 2Institut des Maladies Neurodeg´ en´ eratives,´ Universite´ de Bordeaux, CNRS UMR 5293, Bordeaux, France 3LaBRI, Universite´ de Bordeaux, Institut Polytechnique de Bordeaux, CNRS, UMR 5800, Talence, France 4Ars Technica, Conde´ Nast, New York, NY, USA ∗Corresponding author: [email protected] Disclaimer. We obviously do not encourage scientific fraud nor misconduct. The goal of this article is to alert the reader to problems that have arisen in part due to the Publish or Perish imperative, which has driven a number of researchers to cross the Rubicon without the full appreciation of the consequences. Choosing fraud will hurt science, end careers, and could have impacts on life outside of the lab. If you’re tempted (even slightly) to beautify your results, keep in mind that the benefits are probably not worth the risks. Introduction So, here we are! You’ve decided to join the dark side of Science. at’s great! You’ll soon discover a brand new world of surprising results, non-replicable experiments, fabricated data, and funny statistics. But it’s not without risks: fame and shame, retractions and lost grants, and… possibly jail. But you’ve made your choice, so now you need to know how to manage these risks. Only a few years ago, fraud and misconduct was a piece of cake (See the Mechanical Turk, Perpetual motion machine, Life on Moon, Piltdown man, Water memory). But there are lots of new players in town (PubPeer, RetractionWatch, For Beer Science, Neuroskeptic to name just a few) who have goen prey good at spoing and reporting fraudsters. -
Comparison of Altmetric Scores of Open Access Articles and of Articles
Humboldt-Universität zu Berlin Institut für Bibliotheks- und Informationswissenschaft Berliner Handreichungen zur Bibliotheks- und Informationswissenschaft Heft 444 Altmetrics and Open Access Comparison of Altmetric Scores of open and closed access articles published by German research institutions in the field of natural sciences von Lea Satzinger Altmetrics and Open Access Comparison of Altmetric Scores of open and closed access articles published by German research institutions in the field of natural sciences von Lea Satzinger Berliner Handreichungen zur Bibliotheks- und Informationswissenschaft Begründet von Peter Zahn Herausgegeben von Vivien Petras Humboldt-Universität zu Berlin Heft 444 Satzinger, Lea Altmetrics and Open Access : Comparison of Altmetric Scores of open and closed access articles published by German research institutions in the field of natural sci- ences / von Lea Satzinger. - Berlin : Institut für Bibliotheks- und Informationswis- senschaft der Humboldt-Universität zu Berlin, 2019. – 81 S. : 15 Abb. - (Berliner Handreichungen zur Bibliotheks- und Informationswissenschaft ; 444) ISSN 14 38-76 62 Abstract Altmetrics, in contrast to traditional metrics, measure the societal impact research outputs have on the public in general, using social media platforms as their primary data sources. In this study, differences in Altmetric Scores between open and closed access articles of German research institutions in the field of natural sciences have been analyzed. For this investigation data from the years 2013 to 2017 was gathered from Web of Science, Altmetric.com and Unpaywall. Results indicated that arti- cles published in open access gain higher Altmetric Attention Scores compared to articles behind subscription paywalls, although the difference was statistically not significant. Research outputs published in gold open access had the highest scores, followed by articles in green and then hybrid open access. -
Department of Biology (Pdf)
Department of Biology 26 Summary The Department of Biology at the University of Louisiana at Lafayette took its current form in the late 1980s, with the merger of the Biology and Microbiology Departments. In Spring of 2019, the department has 28 professorial faculty members, 6 emeritus faculty members, and 7 instructors. Almost all professorial faculty members are active in research and serve as graduate faculty. Our graduate programs are also supported by 8 adjunct faculty members; their affiliations include the United States Geological Survey, the National Oceanographic and Atmospheric Administration, and the Smithsonian Institution. In this report, we summarize research accomplishments of our departmental faculty since 2013. The report is focused on our research strengths; however, faculty members have also been awarded considerable honors and funding for educational activities. We also briefly summarize the growth and size of our degree programs. Grant Productivity From 2013 through 2018, the Department of Biology has secured over 16 million dollars of new research funding (the total number of dollars associated with these grants, which are often multi- institutional, is considerably higher). Publications The faculty has a strong record of publication, with 279 papers published in peer-reviewed journals in the last 5 years. An additional 30 papers were published in conference proceedings or other edited volumes. Other Accomplishments Other notable accomplishments between 2013 and 2018 include faculty authorship of five books and edited volumes. Faculty members have served as editors, associate editors, or editorial board members for 21 different journals or as members of 34 society boards or grant review panels. They presented 107 of presentations as keynote addresses or invited seminars. -
Ultra-Efficient Frequency Comb Generation in Algaas-On-Insulator
ARTICLE https://doi.org/10.1038/s41467-020-15005-5 OPEN Ultra-efficient frequency comb generation in AlGaAs-on-insulator microresonators ✉ Lin Chang1,7, Weiqiang Xie1,7 , Haowen Shu1,2,7, Qi-Fan Yang 3, Boqiang Shen 3, Andreas Boes 1,4, Jon D. Peters1, Warren Jin1, Chao Xiang1, Songtao Liu 1, Gregory Moille5, Su-Peng Yu6, Xingjun Wang2, ✉ Kartik Srinivasan 5, Scott B. Papp 6, Kerry Vahala 3 & John E. Bowers1 Recent advances in nonlinear optics have revolutionized integrated photonics, providing on- 1234567890():,; chip solutions to a wide range of new applications. Currently, state of the art integrated nonlinear photonic devices are mainly based on dielectric material platforms, such as Si3N4 and SiO2. While semiconductor materials feature much higher nonlinear coefficients and convenience in active integration, they have suffered from high waveguide losses that prevent the realization of efficient nonlinear processes on-chip. Here, we challenge this status quo and demonstrate a low loss AlGaAs-on-insulator platform with anomalous dispersion and quality (Q) factors beyond 1.5 × 106. Such a high quality factor, combined with high nonlinear coefficient and small mode volume, enabled us to demonstrate a Kerr frequency comb threshold of only ∼36 µW in a resonator with a 1 THz free spectral range, ∼100 times lower compared to that in previous semiconductor platforms. Moreover, combs with broad spans (>250 nm) have been generated with a pump power of ∼300 µW, which is lower than the threshold power of state-of the-art dielectric micro combs. A soliton-step transition has also been observed for the first time in an AlGaAs resonator. -
THE OA EFFECT: HOW DOES OPEN ACCESS AFFECT the USAGE of SCHOLARLY BOOKS? White Paper
springernature.com Illustration inspired by the work of Jean-Claude Bradley Open Research THE OA EFFECT: HOW DOES OPEN ACCESS AFFECT THE USAGE OF SCHOLARLY BOOKS? White paper Open Research: Journals, books, data and tools from: 2 The OA effect: How does open access affect the usage of scholarly books? springernature.com Contents Authors Foreword . 3 Christina Emery, Mithu Lucraft, Executive summary . 4 Agata Morka, Ros Pyne Introduction . 5 November 2017 Part 1: Quantitative findings . 6 Summary . 6 Downloads . 7 Citations and mentions . 11 Part 2: Qualitative findings . 13 Summary . 13 Reasons for publishing open access . 14 Experience of publishing open access . 15 The future of open access . 16 Discussion . 18 Conclusion and recommendations . 20 Acknowledgements . 22 Contacts . 23 About Springer Nature and OA books . 24 Appendices . 26 Appendix 1: Definitions and limitations . 26 Appendix 2: Methodology . 27 Appendix 3: Top 10 downloaded books . 29 Appendix 4: Interviewed authors and funders . 30 Appendix 5: Author questionnaire . 32 Appendix 6: Funder questionnaire . 33 Appendix 7: References . 34 This work is licensed under a Creative Commons Attribution International License (CC BY 4.0) The OA effect: How does open access affect the usage of scholarly books? springernature.com 3 Foreword Springer Nature was created in 2015, but from our earliest days as Springer, Palgrave Macmillan and Nature, we have been publishing monographs and long-form research for some 175 years. The changing environment for book publishing has created both opportunities and challenges for researchers and their funders, for publishers, and for the wider community of readers and educators. As a publisher, we have championed new models of scholarship, introducing ebooks in 2006, and our first open access (OA) book in 2011.