BRAF Gene B-Raf Proto-Oncogene, Serine/Threonine Kinase
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Hidden Targets in RAF Signalling Pathways to Block Oncogenic RAS Signalling
G C A T T A C G G C A T genes Review Hidden Targets in RAF Signalling Pathways to Block Oncogenic RAS Signalling Aoife A. Nolan 1, Nourhan K. Aboud 1, Walter Kolch 1,2,* and David Matallanas 1,* 1 Systems Biology Ireland, School of Medicine, University College Dublin, Belfield, Dublin 4, Ireland; [email protected] (A.A.N.); [email protected] (N.K.A.) 2 Conway Institute of Biomolecular & Biomedical Research, University College Dublin, Belfield, Dublin 4, Ireland * Correspondence: [email protected] (W.K.); [email protected] (D.M.) Abstract: Oncogenic RAS (Rat sarcoma) mutations drive more than half of human cancers, and RAS inhibition is the holy grail of oncology. Thirty years of relentless efforts and harsh disappointments have taught us about the intricacies of oncogenic RAS signalling that allow us to now get a pharma- cological grip on this elusive protein. The inhibition of effector pathways, such as the RAF-MEK-ERK pathway, has largely proven disappointing. Thus far, most of these efforts were aimed at blocking the activation of ERK. Here, we discuss RAF-dependent pathways that are regulated through RAF functions independent of catalytic activity and their potential role as targets to block oncogenic RAS signalling. We focus on the now well documented roles of RAF kinase-independent functions in apoptosis, cell cycle progression and cell migration. Keywords: RAF kinase-independent; RAS; MST2; ASK; PLK; RHO-α; apoptosis; cell cycle; cancer therapy Citation: Nolan, A.A.; Aboud, N.K.; Kolch, W.; Matallanas, D. Hidden Targets in RAF Signalling Pathways to Block Oncogenic RAS Signalling. -
The Mechanism of Activation of Monomeric B-Raf V600E
bioRxiv preprint doi: https://doi.org/10.1101/2021.04.06.438646; this version posted June 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. The Mechanism of Activation of Monomeric B-Raf V600E Ryan C. Maloneya, Mingzhen Zhanga, Hyunbum Janga and Ruth Nussinova,b,* a Computational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Laboratory of Cancer Immunometabolism, National Cancer Institute, Frederick, MD 21702, U.S.A b Department of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel Aviv University, Tel Aviv 69978, Israel * Author for correspondence: Tel: 1-301-846-5579 E-mail: [email protected] Declarations of interest: none 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.04.06.438646; this version posted June 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Oncogenic mutations in the serine/threonine kinase B-Raf, particularly the V600E mutation, are frequent in cancer, making it a major drug target. Although much is known about B-Raf’s active and inactive states, questions remain about the mechanism by which the protein changes between these two states. Here, we utilize molecular dynamics to investigate both wild-type and V600E B-Raf to gain mechanistic insights into the impact of the Val to Glu mutation. -
CDK4/6 Inhibitors in Melanoma: a Comprehensive Review
cells Review CDK4/6 Inhibitors in Melanoma: A Comprehensive Review Mattia Garutti 1,*, Giada Targato 2 , Silvia Buriolla 2 , Lorenza Palmero 1,2 , Alessandro Marco Minisini 2 and Fabio Puglisi 1,2 1 CRO Aviano National Cancer Institute IRCCS, 33081 Aviano, Italy; [email protected] (L.P.); [email protected] (F.P.) 2 Department of Medicine (DAME), University of Udine, 33100 Udine, Italy; [email protected] (G.T.); [email protected] (S.B.); [email protected] (A.M.M.) * Correspondence: [email protected] Abstract: Historically, metastatic melanoma was considered a highly lethal disease. However, recent advances in drug development have allowed a significative improvement in prognosis. In particular, BRAF/MEK inhibitors and anti-PD1 antibodies have completely revolutionized the management of this disease. Nonetheless, not all patients derive a benefit or a durable benefit from these therapies. To overtake this challenges, new clinically active compounds are being tested in the context of clinical trials. CDK4/6 inhibitors are drugs already available in clinical practice and preliminary evidence showed a promising activity also in melanoma. Herein we review the available literature to depict a comprehensive landscape about CDK4/6 inhibitors in melanoma. We present the molecular and genetic background that might justify the usage of these drugs, the preclinical evidence, the clinical available data, and the most promising ongoing clinical trials. Keywords: CDK4/6; CDK4; CDK6; melanoma; Palbociclib; Ribociclib; Abemaciclib Citation: Garutti, M.; Targato, G.; Buriolla, S.; Palmero, L.; Minisini, A.M.; Puglisi, F. CDK4/6 Inhibitors in Melanoma: A Comprehensive 1. Introduction Review. Cells 2021, 10, 1334. -
CDK4/6 Inhibition Reprograms Mitochondrial Metabolism in BRAFV600 Melanoma Via a P53 Dependent Pathway
cancers Article CDK4/6 Inhibition Reprograms Mitochondrial Metabolism in BRAFV600 Melanoma via a p53 Dependent Pathway Nancy T. Santiappillai 1,2, Shatha Abuhammad 1 , Alison Slater 1, Laura Kirby 1, Grant A. McArthur 1,3,†, Karen E. Sheppard 1,2,3,*,† and Lorey K. Smith 1,3,*,† 1 Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne 3052, Australia; [email protected] (N.T.S.); [email protected] (S.A.); [email protected] (A.S.); [email protected] (L.K.); [email protected] (G.A.M.) 2 Department of Biochemistry and Molecular Biology, University of Melbourne, Melbourne 3052, Australia 3 Sir Peter MacCallum Department of Oncology, University of Melbourne, Melbourne 3052, Australia * Correspondence: [email protected] (K.E.S.); [email protected] (L.K.S.) † These authors contributed equally to the work. Simple Summary: Cyclin-dependent kinases 4 and 6 (CDK4/6) are key enzymes controlling the cell cycle. CDK4/6 inhibitors are being tested in multiple clinical trials for a range of cancers including melanoma, and a deeper understanding of how they interact with other therapies is vital for their clinical development. Beyond the cell cycle, CDK4/6 regulates cell metabolism, which is a critical factor determining response to standard-of-care mitogen-activated protein kinase (MAPK) pathway therapies in melanoma. Here, we show that CDK4/6 inhibitors increase glutamine and fatty acid-oxidation-dependent mitochondrial metabolism in melanoma cells, but they do not alter the metabolic response to MAPK inhibitors. These observations shed light on how CDK4/6 inhibitors Citation: Santiappillai, N.T.; impinge on the regulation of metabolism and how they interact with other therapies in the setting of Abuhammad, S.; Slater, A.; Kirby, L.; melanoma. -
In This Issue
IN THIS ISSUE AACR Project GENIE Facilitates Sharing of Genomic and Clinical Data • Project GENIE launched with data • Project GENIE aims to promote • Data from Project GENIE may guide from 19,000 patients from 8 institu data sharing to enhance precision identification of drug targets and tions with a variety of tumor types . medicine research . biomarkers in patients with cancer . Genomic profi ling of tumors accessible in the cBioPortal for Cancer Genomics. Despite the has become increasingly com- differences in genomic testing at the contributing centers, the mon across cancer types, but genomic data collected so far are largely concordant across the data are not regularly made the centers, and mutation rates are similar to those reported by available to the entire research The Cancer Genome Atlas. Initial results from Project GENIE community. The American Asso- suggest that more than 30% of tumors harbor potentially ciation for Cancer Research clinically actionable mutations. Advantages of this platform (AACR) launched the Genomics, include integration of clinical data from electronic health Evidence, Neoplasia, Informa- records and increased statistical power to potentially facilitate tion, Exchange (GENIE) project understanding of the clinical relevance of somatic mutations in partnership with eight academic institutions to facilitate and improve patient selection for targeted therapies. The large-scale sharing of genomic and clinical data. The AACR establishment of infrastructure for integrating genomic and Project GENIE Consortium released the fi rst of set of data clinical data has the potential to aid identifi cation of thera- from 19,000 patients in January 2017, and the number of sam- peutic targets and biomarkers of treatment and response in ples included is expected to grow to more than 100,000 within patients with cancer to enhance precision medicine research 5 years as more centers join the Consortium. -
Protein Kinase C As a Therapeutic Target in Non-Small Cell Lung Cancer
International Journal of Molecular Sciences Review Protein Kinase C as a Therapeutic Target in Non-Small Cell Lung Cancer Mohammad Mojtaba Sadeghi 1,2, Mohamed F. Salama 2,3,4 and Yusuf A. Hannun 1,2,3,* 1 Department of Biochemistry, Molecular and Cellular Biology, Stony Brook University, Stony Brook, NY 11794, USA; [email protected] 2 Stony Brook Cancer Center, Stony Brook University Hospital, Stony Brook, NY 11794, USA; [email protected] 3 Department of Medicine, Stony Brook University, Stony Brook, NY 11794, USA 4 Department of Biochemistry, Faculty of Veterinary Medicine, Mansoura University, Mansoura 35516, Dakahlia Governorate, Egypt * Correspondence: [email protected] Abstract: Driver-directed therapeutics have revolutionized cancer treatment, presenting similar or better efficacy compared to traditional chemotherapy and substantially improving quality of life. Despite significant advances, targeted therapy is greatly limited by resistance acquisition, which emerges in nearly all patients receiving treatment. As a result, identifying the molecular modulators of resistance is of great interest. Recent work has implicated protein kinase C (PKC) isozymes as mediators of drug resistance in non-small cell lung cancer (NSCLC). Importantly, previous findings on PKC have implicated this family of enzymes in both tumor-promotive and tumor-suppressive biology in various tissues. Here, we review the biological role of PKC isozymes in NSCLC through extensive analysis of cell-line-based studies to better understand the rationale for PKC inhibition. Citation: Sadeghi, M.M.; Salama, PKC isoforms α, ", η, ι, ζ upregulation has been reported in lung cancer, and overexpression correlates M.F.; Hannun, Y.A. Protein Kinase C with worse prognosis in NSCLC patients. -
Microrna Deregulation in Papillary Thyroid Cancer and Its
in vivo 35 : 319-323 (2021) doi:10.21873/invivo.12262 MicroRNA Deregulation in Papillary Thyroid Cancer and its Relationship With BRAF V600E Mutation PETR CELAKOVSKY 1, HELENA KOVARIKOVA 2, VIKTOR CHROBOK 1, JAN MEJZLIK 1, JAN LACO 3, HANA VOSMIKOVA 3, MARCELA CHMELAROVA 2 and ALES RYSKA 3 1Department of Otorhinolaryngology and Head and Neck Surgery, University Hospital Hradec Králové, Králové, Czech Republic; 2Institute of Clinical Biochemistry and Diagnostics, University Hospital Hradec Králové, Králové, Czech Republic; 3Fingerland Department of Pathology, University Hospital Hradec Králové, Králové, Czech Republic Abstract. Background: MicroRNAs (miRNAs) are non- miRNAs in PTC compared to normal thyroid gland tissue coding regulatory molecules 18-25 nucleotides in length and nodular goitre was found. Moreover, miR-221 may that act as post-transcriptional regulators of gene serve as a prognostic marker as its over-expression was expression. MiRNAs affect various biological processes significantly associated with recurrent tumors. including carcinogenesis. Deregulation of miRNAa expression has been described in a variety of tumors Thyroid cancer is the most common malignant tumor of the including papillary thyroid carcinoma (PTC). The aim of the endocrine system (1-2). The incidence of thyroid cancer has present study was to investigate the role of selected miRNAs increased dramatically over last three decades (3). Papillary in PTC and find associations between miRNA expression thyroid carcinoma (PTC) represents the majority of and the BRAF (V600E) mutation. Materials and Methods: malignant thyroid tumors, accounting for approximately 80% The study group comprised a total of 62 patients with of all thyroid cancers (4-5). Its overall prognosis is surgically treated PTC. -
1596.Full-Text.Pdf
Published OnlineFirst May 12, 2017; DOI: 10.1158/1535-7163.MCT-16-0798 Cancer Biology and Signal Transduction Molecular Cancer Therapeutics Identification of the Serine Biosynthesis Pathway as a Critical Component of BRAF Inhibitor Resistance of Melanoma, Pancreatic, and Non–Small Cell Lung Cancer Cells Kayleigh C. Ross1, Andrew J. Andrews1,2, Christopher D. Marion1, Timothy J. Yen2, and Vikram Bhattacharjee1 Abstract Metastatic melanoma cells commonly acquire resistance to to BRAF WT tumor cell lines that are intrinsically resistant to BRAF V600E inhibitors (BRAFi). In this study, we identified vemurafenib and dabrafenib. Pretreatment of pancreatic serine biosynthesis as a critical mechanism of resistance. Prote- cancer and non–small cell lung cancer cell lines with sublethal omic assays revealed differential protein expression of serine dosesof50and5nmol/Lofgemcitabine,respectively, biosynthetic enzymes PHGDH, PSPH, and PSAT1 following enhanced killing by both vemurafenib and dabrafenib. The vemurafenib (BRAFi) treatment in sensitive versus acquired novel aspects of this study are the direct identification of serine resistant melanoma cells. Ablation of PHGDH via siRNA sen- biosynthesis as a critical mechanism of BRAF V600E inhibitor sitizedacquiredresistantcells to vemurafenib. Inhibiting the resistance and the first successful example of using gemcitabine folate cycle, directly downstream of serine synthesis, with þ BRAFis in combination to kill previously drug-resistant methotrexate also displayed similar sensitization. Using cancer cells, creating the translational potential of pretreatment the DNA-damaging drug gemcitabine, we show that gemcita- with gemcitabine prior to BRAFi treatment of tumor cells to bine pretreatment sensitized resistant melanoma cells to BRA- reverse resistance within the mutational profile and the WT. Fis vemurafenib and dabrafenib. -
COTELLIC™ (Cobimetinib) Oral Tablet
PHARMACY COVERAGE GUIDELINES ORIGINAL EFFECTIVE DATE: 1/21/2016 SECTION: DRUGS LAST REVIEW DATE: 2/18/2021 LAST CRITERIA REVISION DATE: 2/18/2021 ARCHIVE DATE: COTELLIC™ (cobimetinib) oral tablet Coverage for services, procedures, medical devices and drugs are dependent upon benefit eligibility as outlined in the member's specific benefit plan. This Pharmacy Coverage Guideline must be read in its entirety to determine coverage eligibility, if any. This Pharmacy Coverage Guideline provides information related to coverage determinations only and does not imply that a service or treatment is clinically appropriate or inappropriate. The provider and the member are responsible for all decisions regarding the appropriateness of care. Providers should provide BCBSAZ complete medical rationale when requesting any exceptions to these guidelines. The section identified as “Description” defines or describes a service, procedure, medical device or drug and is in no way intended as a statement of medical necessity and/or coverage. The section identified as “Criteria” defines criteria to determine whether a service, procedure, medical device or drug is considered medically necessary or experimental or investigational. State or federal mandates, e.g., FEP program, may dictate that any drug, device or biological product approved by the U.S. Food and Drug Administration (FDA) may not be considered experimental or investigational and thus the drug, device or biological product may be assessed only on the basis of medical necessity. Pharmacy Coverage Guidelines are subject to change as new information becomes available. For purposes of this Pharmacy Coverage Guideline, the terms "experimental" and "investigational" are considered to be interchangeable. BLUE CROSS®, BLUE SHIELD® and the Cross and Shield Symbols are registered service marks of the Blue Cross and Blue Shield Association, an association of independent Blue Cross and Blue Shield Plans. -
Chemical Agent and Antibodies B-Raf Inhibitor RAF265
Supplemental Materials and Methods: Chemical agent and antibodies B-Raf inhibitor RAF265 [5-(2-(5-(trifluromethyl)-1H-imidazol-2-yl)pyridin-4-yloxy)-N-(4-trifluoromethyl)phenyl-1-methyl-1H-benzp{D, }imidazol-2- amine] was kindly provided by Novartis Pharma AG and dissolved in solvent ethanol:propylene glycol:2.5% tween-80 (percentage 6:23:71) for oral delivery to mice by gavage. Antibodies to phospho-ERK1/2 Thr202/Tyr204(4370), phosphoMEK1/2(2338 and 9121)), phospho-cyclin D1(3300), cyclin D1 (2978), PLK1 (4513) BIM (2933), BAX (2772), BCL2 (2876) were from Cell Signaling Technology. Additional antibodies for phospho-ERK1,2 detection for western blot were from Promega (V803A), and Santa Cruz (E-Y, SC7383). Total ERK antibody for western blot analysis was K-23 from Santa Cruz (SC-94). Ki67 antibody (ab833) was from ABCAM, Mcl1 antibody (559027) was from BD Biosciences, Factor VIII antibody was from Dako (A082), CD31 antibody was from Dianova, (DIA310), and Cot antibody was from Santa Cruz Biotechnology (sc-373677). For the cyclin D1 second antibody staining was with an Alexa Fluor 568 donkey anti-rabbit IgG (Invitrogen, A10042) (1:200 dilution). The pMEK1 fluorescence was developed using the Alexa Fluor 488 chicken anti-rabbit IgG second antibody (1:200 dilution).TUNEL staining kits were from Promega (G2350). Mouse Implant Studies: Biopsy tissues were delivered to research laboratory in ice-cold Dulbecco's Modified Eagle Medium (DMEM) buffer solution. As the tissue mass available from each biopsy was limited, we first passaged the biopsy tissue in Balb/c nu/Foxn1 athymic nude mice (6-8 weeks of age and weighing 22-25g, purchased from Harlan Sprague Dawley, USA) to increase the volume of tumor for further implantation. -
CRAF Mutations in Lung Cancer Can Be Oncogenic and Predict Sensitivity to Combined Type II RAF and MEK Inhibition
Oncogene (2019) 38:5933–5941 https://doi.org/10.1038/s41388-019-0866-7 BRIEF COMMUNICATION CRAF mutations in lung cancer can be oncogenic and predict sensitivity to combined type II RAF and MEK inhibition 1 1 1 1 1 Amir Noeparast ● Philippe Giron ● Alfiah Noor ● Rajendra Bahadur Shahi ● Sylvia De Brakeleer ● 1 1 2,3 2,3 1 Carolien Eggermont ● Hugo Vandenplas ● Bram Boeckx ● Diether Lambrechts ● Jacques De Grève ● Erik Teugels1 Received: 18 June 2018 / Revised: 4 April 2019 / Accepted: 28 April 2019 / Published online: 08 July 2019 © The Author(s) 2019. This article is published with open access Abstract Two out of 41 non-small cell lung cancer patients enrolled in a clinical study were found with a somatic CRAF mutation in their tumor, namely CRAFP261A and CRAFP207S. To our knowledge, both mutations are novel in lung cancer and CRAFP261A has not been previously reported in cancer. Expression of CRAFP261A in HEK293T cells and BEAS-2B lung epithelial cells led to increased ERK pathway activation in a dimer-dependent manner, accompanied with loss of CRAF phosphorylation at the negative regulatory S259 residue. Moreover, stable expression of CRAFP261A in mouse embryonic fibroblasts and BEAS- 1234567890();,: 1234567890();,: 2B cells led to anchorage-independent growth. Consistent with a previous report, we could not observe a gain-of-function with CRAFP207S. Type II but not type I RAF inhibitors suppressed the CRAFP261A-induced ERK pathway activity in BEAS- 2B cells, and combinatorial treatment with type II RAF inhibitors and a MEK inhibitor led to a stronger ERK pathway inhibition and growth arrest. -
Targeting Mtor Signaling Overcomes Acquired Resistance to Combined BRAF and MEK Inhibition in BRAF-Mutant Melanoma
www.nature.com/onc Oncogene ARTICLE OPEN Targeting mTOR signaling overcomes acquired resistance to combined BRAF and MEK inhibition in BRAF-mutant melanoma Beike Wang1,11, Wei Zhang1,11, Gao Zhang 2,10,11, Lawrence Kwong3, Hezhe Lu4, Jiufeng Tan2, Norah Sadek2, Min Xiao2, Jie Zhang 5, 6 2 2 2 2 5 7 6 Marilyne Labrie , Sergio Randell , Aurelie Beroard , Eric Sugarman✉ , Vito W. Rebecca✉ , Zhi Wei , Yiling Lu , Gordon B. Mills , Jeffrey Field8, Jessie Villanueva2, Xiaowei Xu9, Meenhard Herlyn 2 and Wei Guo 1 © The Author(s) 2021 Targeting MAPK pathway using a combination of BRAF and MEK inhibitors is an efficient strategy to treat melanoma harboring BRAF-mutation. The development of acquired resistance is inevitable due to the signaling pathway rewiring. Combining western blotting, immunohistochemistry, and reverse phase protein array (RPPA), we aim to understanding the role of the mTORC1 signaling pathway, a center node of intracellular signaling network, in mediating drug resistance of BRAF-mutant melanoma to the combination of BRAF inhibitor (BRAFi) and MEK inhibitor (MEKi) therapy. The mTORC1 signaling pathway is initially suppressed by BRAFi and MEKi combination in melanoma but rebounds overtime after tumors acquire resistance to the combination therapy (CR) as assayed in cultured cells and PDX models. In vitro experiments showed that a subset of CR melanoma cells was sensitive to mTORC1 inhibition. The mTOR inhibitors, rapamycin and NVP-BEZ235, induced cell cycle arrest and apoptosis in CR cell lines. As a proof-of-principle, we demonstrated that rapamycin and NVP-BEZ235 treatment reduced tumor growth in CR xenograft models. Mechanistically, AKT or ERK contributes to the activation of mTORC1 in CR cells, depending on PTEN status of these cells.