Chenopodium Ucrainicum (Chenopodiaceae / Amaranthaceae Sensu APG), a New Diploid Species: a Morphological Description and Pictorial Guide
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Trophic Resource Use and Partitioning in Multispecies Ungulate Communities
Trophic resource use and partitioning in multispecies ungulate communities Robert Spitzer Faculty of Forest Sciences Department of Wildlife, Fish, and Environmental Studies Umeå Doctoral thesis Swedish University of Agricultural Sciences Umeå 2019 Acta Universitatis agriculturae Sueciae 2019:73 Cover: Annual diet composition of deer in Sweden (artworK: R. Spitzer) ISSN 1652-6880 ISBN (print version) 978-91-7760-464-8 ISBN (electronic version) 978-91-7760-465-5 © 2019 Robert Spitzer, Umeå Print: Original trycKeri, Umeå 2019 Trophic resource use and partitioning in multispecies ungulate communities Abstract Over the past decades, ungulates across the northern hemisphere have been expanding in range and numbers. This has raised concerns about their impacts, particularly on shared resources with humans, e.g., timber trees. Understanding how different ungulate species use trophic resources is therefore a crucial component of managing their populations. In this thesis, I synthesized data from the literature and used faecal DNA metabarcoding to investigate diets and patterns of resource partitioning for ungulate communities in Sweden and at the European scale. I also evaluated the reliability of dung morphometry for identifying ungulate species. I found that species identification of faecal pellets is difficult where similar-sized ungulates coexist which questions the reliability of pellet counts as a monitoring technique in such systems. Dung morphometry could, however, clearly distinguish moose from the smaller deer species. Across Europe, average diets of the four main deer species fit well with predictions by Hofmann’s hypothesis of ruminant feeding types. Red and fallow deer (mixed feeders) showed larger dietary plasticity than moose and roe deer (browsers). -
Chenopodioideae, Chenopodiaceae/ Amaranthaceae): Implications for Evolution and Taxonomy
Fruit and Seed Anatomy of Chenopodium and Related Genera (Chenopodioideae, Chenopodiaceae/ Amaranthaceae): Implications for Evolution and Taxonomy Alexander P. Sukhorukov1,2*, Mingli Zhang1,3 1 Key Laboratory of Biogeography and Bioresource in Arid Land, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, Xinjiang, China, 2 Department of Higher Plants, Biological Faculty, Moscow Lomonosov State University, Moscow, Russia, 3 Institute of Botany, Chinese Academy of Sciences, Beijing, China Abstract A comparative carpological study of 96 species of all clades formerly considered as the tribe Chenopodieae has been conducted for the first time. The results show important differences in the anatomical structure of the pericarp and seed coat between representatives of terminal clades including Chenopodium s.str.+Chenopodiastrum and the recently recognized genera Blitum, Oxybasis and Dysphania. Within Chenopodium the most significant changes in fruit and seed structure are found in members of C. sect. Skottsbergia. The genera Rhagodia and Einadia differ insignificantly from Chenopodium. The evolution of heterospermy in Chenopodium is discussed. Almost all representatives of the tribe Dysphanieae are clearly separated from other Chenopodioideae on the basis of a diverse set of characteristics, including the small dimensions of the fruits (especially in Australian taxa), their subglobose shape (excl. Teloxys and Suckleya), and peculiarities of the pericarp indumentum. The set of fruit and seed characters evolved within the subfamily Chenopodioideae is described. A recent phylogenetic hypothesis is employed to examine the evolution of three (out of a total of 21) characters, namely seed color, testa-cell protoplast characteristics and embryo orientation. Citation: Sukhorukov AP, Zhang M (2013) Fruit and Seed Anatomy of Chenopodium and Related Genera (Chenopodioideae, Chenopodiaceae/Amaranthaceae): Implications for Evolution and Taxonomy. -
Disentangling Sources of Gene Tree Discordance in Phylogenomic Datasets: Testing
bioRxiv preprint doi: https://doi.org/10.1101/794370; this version posted March 13, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 1 Disentangling Sources of Gene Tree Discordance in Phylogenomic Datasets: Testing 2 Ancient Hybridizations in Amaranthaceae s.l. 3 4 Diego F. Morales-Briones1*, Gudrun Kadereit2, Delphine T. Tefarikis2, Michael J. Moore3, 5 Stephen A. Smith4, Samuel F. Brockington5, Alfonso Timoneda5, Won C. Yim6, John C. 6 Cushman6, Ya Yang1* 7 8 1 Department of Plant and Microbial Biology, University of Minnesota-Twin Cities, 1445 9 Gortner Avenue, St. Paul, MN 55108, USA 10 2 Institut für Molekulare Physiologie, Johannes Gutenberg-Universität Mainz, D-55099, Mainz, 11 Germany 12 3 Department of Biology, Oberlin College, Science Center K111, 119 Woodland Street, Oberlin, 13 OH 44074-1097, USA 14 4 Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University 15 Avenue, Ann Arbor, MI 48109-1048, USA 16 5 Department of Plant Sciences, University of Cambridge, Tennis Court Road, Cambridge, CB2 17 3EA, United Kingdom 18 6 Department of Biochemistry and Molecular Biology, University of Nevada, Reno, NV, 89577, 19 USA 20 21 * Correspondence to be sent to: Diego F. Morales-Briones and Ya Yang. Department of Plant and 22 Microbial Biology, University of Minnesota, 1445 Gortner Avenue, St. Paul, MN 55108, USA, 23 Telephone: +1 612-625-6292 (YY) Email: [email protected]; [email protected] bioRxiv preprint doi: https://doi.org/10.1101/794370; this version posted March 13, 2020. -
Alien Vascular Plants in Iceland: Diversity, Spatial Patterns, Temporal
Flora 208 (2013) 648–673 Contents lists available at ScienceDirect Flora j ournal homepage: www.elsevier.com/locate/flora Alien vascular plants in Iceland: Diversity, spatial patterns, temporal trends, and the impact of climate change a,∗ b a Pawel Wasowicz , Ewa Maria Przedpelska-Wasowicz , Hörður Kristinsson a The Icelandic Institute of Natural History, Borgum við Norðurslóð, PO Box 180, IS-600 Akureyri, Iceland b Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096 Warszawa, Poland a r t a b i s c l e i n f o t r a c t Article history: The present study provides first comprehensive and up-to-date results on alien plant taxa in Iceland Received 24 May 2013 since 1967. We evidenced the presence of 336 alien vascular plant taxa, including 277 casuals and 59 Accepted 26 September 2013 naturalised taxa, two being invasive. The distribution of the alien flora exhibits a clear spatial pattern Available online 6 October 2013 showing hotspots of occurrence and diversity within areas of major settlement centres. Altitude above sea level and temperature-related variables proved to be the most important factors shaping alien plant Keywords: distribution in Iceland. Predictive modelling evidenced that arctic areas of Iceland and the Central High- Alien flora lands are under serious risk of alien plant invasion due to climate change. The results provide crucial Iceland information for alien and invasive plant management and contribute data for meta-analyses of invasion Climate change processes worldwide. Invasive species Predictive modelling © 2013 Elsevier GmbH. All rights reserved. Maxent Introduction decades northern plant taxa, well adapted to cold environments will come under pressure and have to withdraw from their natural Only a small percent of alien plant taxa have a potential to environments. -
The Sequenced Angiosperm Genomes and Genome Databases
REVIEW published: 13 April 2018 doi: 10.3389/fpls.2018.00418 The Sequenced Angiosperm Genomes and Genome Databases Fei Chen 1†, Wei Dong 1†, Jiawei Zhang 1, Xinyue Guo 1, Junhao Chen 2, Zhengjia Wang 2, Zhenguo Lin 3, Haibao Tang 1 and Liangsheng Zhang 1* 1 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, College of Life Sciences, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Ministry of Education Key Laboratory of Genetics, Breeding and Multiple Utilization of Corps, Fujian Agriculture and Forestry University, Fuzhou, China, 2 State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Hangzhou, China, 3 Department of Biology, Saint Louis University, St. Louis, MO, United States Angiosperms, the flowering plants, provide the essential resources for human life, such as food, energy, oxygen, and materials. They also promoted the evolution of human, animals, and the planet earth. Despite the numerous advances in genome reports or sequencing technologies, no review covers all the released angiosperm genomes and the genome databases for data sharing. Based on the rapid advances and innovations in the database reconstruction in the last few years, here we provide a comprehensive Edited by: review for three major types of angiosperm genome databases, including databases Santosh Kumar Upadhyay, Panjab University, India for a single species, for a specific angiosperm clade, and for multiple angiosperm Reviewed by: species. The scope, tools, and data of each type of databases and their features Sumit Kumar Bag, are concisely discussed. The genome databases for a single species or a clade of National Botanical Research Institute species are especially popular for specific group of researchers, while a timely-updated (CSIR), India Xiyin Wang, comprehensive database is more powerful for address of major scientific mysteries at North China University of Science and the genome scale. -
1504 863890.Pdf
Prodanović et al.: Changes in the floristic composition and ecology of ruderal flora of the town of Kosovska Mitrovica, Serbia - 863 - CHANGES IN THE FLORISTIC COMPOSITION AND ECOLOGY OF RUDERAL FLORA OF THE TOWN OF KOSOVSKA MITROVICA, SERBIA FOR A PERIOD OF 20 YEARS PRODANOVIĆ, D.1* – KRIVOŠEJ, Z.2 – AMIDŽIĆ, L.3 – BIBERDŽIĆ, M.1 – KRSTIĆ, Z.2 1University of Priština, Faculty of Agriculture Lešak Kopaonička Street bb, 38219 Lešak, Serbia (phone: + 381 64 007 27 87) 2University of Priština, Faculty of Natural Science Lole Ribara Street, No. 29, 38220 Kosovska Mitrovica, Serbia 3University Union Nikola Tesla, Faculty of Ecology and Environmental Protection Cara Dušana street, No. 62-64, 11000 Belgrade, Serbia *Corresponding author e-mail: [email protected] (Received 23rd May 2017; accepted 2nd Aug 2017) Abstract. The paper is concerned with the results of the ruderal flora investigation carried out in the vicinity of the town of Kosovska Mitrovica (Serbia) and its surroundings, in different urban and suburban habitats, and is based on the copious floristic researches conducted between 1995 and 1996 and repeated in 2016. The total number of 444 taxa was reported in the course of 2016. Not only was reported the presence of 386 taxa in the same areas between 1995 and 1996, but also 58 new taxa were recorded in recent field explorations. The ruderal flora composition in Kosovska Mitrovica area has changed by 13.06% in the past 20 years. Detailed taxonomic, ecological, and phyto-geographical analyses were provided for the discovered synanthropic flora. Special attention was paid to the appearance of new invasive species unregistered 20 years ago, but which, due to the more intensive anthropogenic influence, have become more diverse in number and frequency in the investigated areas. -
Comprehensive Leaf Size Traits Dataset for Seven Plant Species from Digitised Herbarium Specimen Images Covering More Than Two Centuries
Biodiversity Data Journal 9: e69806 doi: 10.3897/BDJ.9.e69806 Data Paper Comprehensive leaf size traits dataset for seven plant species from digitised herbarium specimen images covering more than two centuries Vamsi Krishna Kommineni‡,§, Susanne Tautenhahn‡, Pramod Baddam‡,§, Jitendra Gaikwad|,¶, Barbara Wieczorek§#, Abdelaziz Triki , Jens Kattge‡,| ‡ Max Planck Institute for Biogeochemistry, Jena, Germany § Ernst-Abbe-Hochschule Jena, Jena, Germany | German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany ¶ Friedrich Schiller University Jena, Jena, Germany # University of Sfax, Sfax, Tunisia Corresponding author: Vamsi Krishna Kommineni ([email protected]), Susanne Tautenhahn (staut@b gc-jena.mpg.de) Academic editor: Alexander Sennikov Received: 07 Jun 2021 | Accepted: 30 Jun 2021 | Published: 13 Jul 2021 Citation: Kommineni VK, Tautenhahn S, Baddam P, Gaikwad J, Wieczorek B, Triki A, Kattge J (2021) Comprehensive leaf size traits dataset for seven plant species from digitised herbarium specimen images covering more than two centuries . Biodiversity Data Journal 9: e69806. https://doi.org/10.3897/BDJ.9.e69806 Abstract Background Morphological leaf traits are frequently used to quantify, understand and predict plant and vegetation functional diversity and ecology, including environmental and climate change responses. Although morphological leaf traits are easy to measure, their coverage for characterising variation within species and across temporal scales is limited. At the same time, there are about 3100 herbaria worldwide, containing approximately 390 million plant specimens dating from the 16th to 21st century, which can potentially be used to extract morphological leaf traits. Globally, plant specimens are rapidly being digitised and images are made openly available via various biodiversity data platforms, such as iDigBio and GBIF. -
Weed Ecology in Natural and Agricultural Systems
Weed Ecology in Natural and Agricultural Systems Weed Ecology in Natural and Agricultural Systems Barbara D. Booth Department of Plant Agriculture University of Guelph Canada Stephen D. Murphy Department of Environment and Resource Studies University of Waterloo Canada and Clarence J. Swanton Department of Plant Agriculture University of Guelph Canada CABI Publishing CABI Publishing is a division of CAB International CABI Publishing CABI Publishing CAB International 44 Brattle Street Wallingford 4th Floor Oxon OX10 8DE Cambridge, MA 02138 UK USA Tel: +44 (0)1491 832111 Tel: +1 617 395 4056 Fax: +44 (0)1491 833508 Fax: +1 617 354 6875 E-mail: [email protected] E-mail: [email protected] Web site: www.cabi-publishing.org ©CAB International 2003. All rights reserved. No part of this publication may be reproduced in any form or by any means, electronically, mechanically, by photocopying, recording or otherwise, without the prior permission of the copyright owners. A catalogue record for this book is available from the British Library, London, UK. Library of Congress Cataloging-in-Publication Data Booth, Barbara D. Weed ecology in natural and agricultural systems/Barbara D. Booth, Stephen D. Murphy, and Clarence J. Swanton. p. cm. Includes bibliographical references (p. ). ISBN 0-85199-528-4 (alk. paper) 1. Weeds—Ecology. 2. Weeds. I. Murphy, Stephen D. II. Swanton, Clarence J. III. Title. SB611.B59 2003 632’.5—dc21 2002010884 ISBN 0 85199 528 4 Typeset by Wyvern 21 Ltd, Bristol Printed and bound in the UK by Biddles Ltd, Guildford and King’s Lynn Contents Preface vii 1. Ecology of Weeds 1 Part I. -
Chenopodium Badachschanicum (Amaranthaceae), a New Record for Iran
ISSN 2226-3063 e-ISSN 2227-9555 Modern Phytomorphology 10 (Suppl.): 31–36, 2016 https://doi.org/10.5281/zenodo.159044 CHENOPODIUM BADACHSCHANICUM (AMARANTHACEAE), A NEW RECORD FOR IRAN Maryam Keshavarzi 1*, Samaneh Mosaferi 1, 2**, Habibollah Ijbari 3§§, Farzaneh Ebrahimi 1***, Mojdeh Khajeh 1§ Abstract. Chenopodium badachschanicum Tzvelev is recorded for the first time for the flora of Iran. The species has been collected from Hamoon lake basin in South East of Iran. Characteristics, exact localities, habitat and geographical distribution are explained. Key words: Amaranthaceae, Chenopodium badachschanicum, new record, Iran 1 Plant Science Department, Faculty of Biological Sciences, Alzahra University, North Sheikh Bahaee str., Vanak, 1993893973 Tehran, Iran; * [email protected]; ** [email protected]; *** [email protected]; § [email protected] 2 Plant Science Department, Faculty of Biological Sciences, Shahid Beheshti University, Daneshjou blr., Evin, 1983969411 Tehran, Iran 3 Department of Biology, Faculty of Science, University of Zabol, Bonjar ave., 7383198616 Zabol, Iran; §§ [email protected] Introduction (1960), in Eastern Asia it was not known before this time (Zhu et al. 2003). Chenopodium L. comprises about 150 Several new species of genus Chenopodium annuals and perennials in the world (Fuentes- have been recorded in recent years from Iran Bazan et al. 2012), out of which at least (Rahiminejad et al. 2004; Rahiminejad & 15 species occur in Iran (Uotila 1997; Ghaemmaghami 2005), confirming that this Assadi 2001). genus here is represented by more species than Due to phenotypic plasticity, polyploidy it was suggested before (Uotila 1997). During and hybridization, taxonomy of Chenopodium field investigation in Sistan and Baluchestan always was a problematic task (Cole 1961; provinces at Hamoon Lake district (south east Rahiminejad & Gornall 2004; Kurashige of Iran), an interesting Chenopodium specimen & Agrawal 2005; Zhou et al. -
The Influence of the Eastern Migration Route on the Slovak Flora
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Tuexenia - Mitteilungen der Floristisch-soziologischen Arbeitsgemeinschaft Jahr/Year: 2017 Band/Volume: NS_37 Autor(en)/Author(s): Jehlik Vladimir, Zaliberova Marica, Majekova Jana Artikel/Article: The influence of the Eastern migration route on the Slovak flora - a comparison after 40 years 313-332 ©Floristisch-soziologische Arbeitsgemeinschaft; www.tuexenia.de; download unter www.zobodat.at Tuexenia 37: 313–332. Göttingen 2017. doi: 10.14471/2016.37.023, available online at www.tuexenia.de The influence of the Eastern migration route on the Slovak flora – a comparison after 40 years Der Einfluss des östlichen Migrationsweges auf die slowakische Flora – ein Vergleich nach 40 Jahren Vladimír Jehlík1, Marica Zaliberová2 & Jana Májeková2, * 1V Lesíčku 1, 150 00 Praha 5 – Smíchov, Czech Republic; 2Institute of Botany, Plant Science and Biodiversity Center, Slovak Academy of Sciences, Dúbravská cesta 9, 845 23 Bratislava, Slovak Republic *Corresponding author, e-mail: [email protected] Abstract Transport is an important source of introduction and spread of alien plants into new areas and coun- tries. This study provides comprehensive research of selected railway localities in South-Eastern Slo- vakia to determine the influence of the Eastern Migration Route on the Slovak flora. Railway trans- shipment yards in Čierna nad TisouĽ DobrἠVeké Kapušany and Maovce were studied from 1964 to 2013; with historic data sampled 1964–1998 and recent data sampled 2012–2013. These data sets were compared to determine differences in species structure following the decreased use of the trans- shipment yards. A total of 657 vascular plant taxa were recorded in all localities (566 taxa in the historic and 431 taxa in the recent data set). -
Chenopodium Album S
RESEARCH ARTICLE Allopolyploid Origin of Chenopodium album s. str. (Chenopodiaceae): A Molecular and Cytogenetic Insight Karol Krak1,2*, Petr Vít1,2, Alexander Belyayev1, Jan Douda1,2, Lucia Hreusová1,2, Bohumil Mandák1,2 1 Institute of Botany, Czech Academy of Sciences, Zámek 1, CZ-252 43, Průhonice, Czech Republic, 2 Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Kamýcká 129, CZ-165 21, Praha 6 – Suchdol, Czech Republic a11111 * [email protected] Abstract Reticulate evolution is characterized by occasional hybridization between two species, creating a network of closely related taxa below and at the species level. In the present OPEN ACCESS research, we aimed to verify the hypothesis of the allopolyploid origin of hexaploid C. album Citation: Krak K, Vít P, Belyayev A, Douda J, s. str., identify its putative parents and estimate the frequency of allopolyploidization events. Hreusová L, Mandák B (2016) Allopolyploid Origin of We sampled 122 individuals of the C. album aggregate, covering most of its distribution Chenopodium album s. str. (Chenopodiaceae): A Molecular and Cytogenetic Insight. PLoS ONE 11(8): range in Eurasia. Our samples included putative progenitors of C. album s. str. of both e0161063. doi:10.1371/journal.pone.0161063 ploidy levels, i.e. diploids (C. ficifolium, C. suecicum) and tetraploids (C. striatiforme, C. Editor: Elvira Hörandl, Georg-August-Universitat strictum). To fulfil these objectives, we analysed sequence variation in the nrDNA ITS Gottingen, GERMANY region and the rpl32-trnL intergenic spacer of cpDNA and performed genomic in-situ hybrid- Received: January 14, 2016 ization (GISH). Our study confirms the allohexaploid origin of C. -
ANNALI DI BOTANICA Ann
ANNALI DI BOTANICA Ann. Bot. (Roma), 2018, 8: 67–74 Journal homepage: http://annalidibotanica.uniroma1.it STUDIES ON CHENOPODIUM ALBUM S. L. (CHENOPODIACEAE / AMARANTHACEAE S. L.): CHENOPODIUM PEDUNCULARE IAMONICO D.1,*, MOSYAKIN S.L.2 1 Department PDTA, University of Rome Sapienza, 00196 Rome, Italy; 2 M.G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, 01004 Kyiv (Kiev), Ukraine *Corresponding author: Telephone: +390649919368; email: [email protected] (RECEIVED 19 JANUARY 2018; RECEIVED IN REVISED FORM 25 APRIL 2018; ACCEPTED 26 APRIL 2018) ABSTRACT – Chenopodium album s. l. is one of the most taxonomically difficult groups of taxa in the genusChenopodium s. s. due to its high phenotypic variability and possible ancient and current hybridization which led to numerous nomenclatural problems and misapplication of names. Proper application of many names in Chenopodium (especially taxa described in the 18–19th centuries) still remains uncertain. As currently accepted in recent publications, several subspecies can be considered under C. album for the European flora, i.e C. album L. subsp. album, C. album subsp. pedunculare (Bertol.) Arcang., and C. album subsp. borbasii (Murr) Soó. Bertoloni’s C. pedunculare (basionym of C. album subsp. pedunculare) appears still poorly understood taxonomically. The present contribution is based on field surveys, analyses of the relevant literature (protologues included), and examination of specimens preserved in several herbaria. The name C. pedunculare was lectotypified by Dvořák (1984) on a specimen deposited at BOLO. Based on morphology and chorology considerations, that taxon can be recognizes at species rank. For nomenclatural purposes, the names C. concatenatum Thuillier (and sensu Aellen), C.