Feeding Behaviors in Cellular Slime Molds: a Microbial System to Study Competiion

Total Page:16

File Type:pdf, Size:1020Kb

Feeding Behaviors in Cellular Slime Molds: a Microbial System to Study Competiion Feeding Behaviors in Cellular Slime Molds: A Microbial System To Study Competiion Donna M. Bozzone O NE challengefaced in the teachingof introduc- goes a series of shape changes, specific genes are tory biology laboratory is in finding ecology turned on while others are turned off, and cells differ- exercises that are experimental, open-ended, entiate. The result is a fruiting body, a structure relatively inexpensive, and which can be completed consisting of a ball of spores borne atop a delicate and even repeated in a reasonable time-frame. A cellular stalk (Bonner 1944). The fruiting body is a survey of Introductory Biology laboratory manuals resting structure for the organism. Unless food be- shows exercises that undertake studies of pond eco- comes available, the amoebae will remain dormant Downloaded from http://online.ucpress.edu/abt/article-pdf/59/9/565/48121/4450384.pdf by guest on 26 September 2021 systems (Eberhard1990; Morgan & Carter1993), water within the spores. analysis (Abramhoff& Thomson 1994), forest ecosys- The problem investigated in this student project is tems (Morgan& Carter1993), and survivorship(Perry an ecological one. Examination of soil samples col- & Martin 1992). However, none takes full advantage lected from a variety of locations reveals that different of the ease with which microbial eukaryotes can be species of cellular slime molds exist very close to- used for laboratoryinstruction. Described in this pa- gether in nature and in all probability, inhabit the per is a laboratoryproject undertaken by our first year same physical space (Eisenberg 1976; Kuserk 1980; biology students. In this project,students study com- Buss 1982;Eisenberg et al. 1989;Ketcham & Eisenberg petition among various cellular slime molds. After a 1989). The question arises then, how do different brief introductionto the topic of competitionand basic species share or compete for resources to permit life history information about cellular slime molds, survival; how do these organisms partition their students either chose a suggested question, or posed niches?At least for some cases, it has been determined their own, and designed original experiments to an- that different species of cellular slime molds exhibit swer these questions. Without exception,the results of dissimilargrowth rates and competitiveabilities when student projectslead easily to additionaltestable ques- fed different species of bacteria (Horn 1971; Kuserk tions. 1980). Therefore,the similarity of the physical space occupied may not be the most critical factor; the different species avoid direct competition by having Background differentfood preferences.While this differentialuse If you were to isolate the organisms found living in of resourcesmight help to produce the microdistribu- the soil, some of the very interesting microbial eu- tion of cellular slime molds in nature, direct interfer- karyotesyou would encounterare the social amoebae, ence between species is another possible mechanism. or cellular slime molds (Raper 1984). As part of their Indeed, McQueen (1971a,b) studied competition be- unusual life cycle, cellular slime molds exhibit a tween two cellularslime mold species and argued that variety of cellular behaviors that has made them a direct interspecificcompetition is an important strat- very popular experimentalsystem for studying basic egy used by some cellular slime molds. The experi- questions about cell biology, gene expression, devel- ment outlined below describes a method to study opment, ecology, and evolution (Bonner1967; Loomis these behaviors. 1982;Spudich 1987).During the asexual component of the life cycle (Figure 1), spores germinate releasing amoebae. These feed on bacteria and produce more Methods amoebaeby binary fission. If the food supply becomes Student Instructions depleted, the amoebae enter their social phase. They aggregate, or come together, thus producing a multi- Setting Up Cultures. USE STERILETECHNIQUE cellular organism. This multicellularstructure under- FOR THE PROCEDURES DESCRIBED BELOW. 1. Each group of students will be provided with suspensions of various types of bacteria. For Donna M. Bozzone is Associate Professor and Chair of bacterial species #1, vortex or agitate the sus- Biology at St. Michael's College, Colchester, VT 05439; to the bacteria.Using a e-mail: [email protected]. pension gently suspend sterile loop, streak a thin line of the bacterial CELLULARSLIME MOLDS 565 into a sterile test tube. This suspension will be used by the entire class. 5. Once the bacterial streak is dry, deposit, at one end of the MORPHOGENESIS SLUG streak,10 ,lI of a cellularslime MIGRATION mold spore suspension. (You can use an automatic pipet, a sterile capillary pipet, or a sterile loop to do so.) Repeat this step for each bacterial streak. 6. If a sterile bench is available, return the petri dishes to it, and once again blow sterile air over the open dishes to facilitateevaporation of liquid Downloaded from http://online.ucpress.edu/abt/article-pdf/59/9/565/48121/4450384.pdf by guest on 26 September 2021 from the spore suspension. (If FRUITINGBODY AGGREGATION no hood is available, be care- ful when moving the dishes so that the liquid from the spore suspension won't spread. It will eventually dry on its own.) 7. Steps 1-6 can be repeated to study another cellular slime mold strain or species. 8. Determine the rate of feeding by measuring the movement SPORES of amoebae down the bacte- rial streak.The position of the amoebae on the bacterial streak is called the feeding front. Measurements should AMOEBAE be taken daily for 7-10 days. Figure 1. Life cycle of a cellular slime mold. 9. Examine the morphology of the different cellular slime mold species used in your ex- suspension on a petri dish of lactose-peptone periment to determine the identity of the cellu- (2LP) agar. lar slime mold fruiting bodies that develop at 2. Repeat Step 1 for bacterial species 2, 3, and so the far end of the bacterial streak (after the one. Markeach petri dish to indicate the type of streakhas been eaten). Comparetheir morphol- bacteriapresent. ogy to the fruiting bodies on the stock plates. 3. If a sterile bench equipped with a fan is avail- 10. Whateverquestion you decide to pursue, exam- able, place the petri dishes streaked with bacte- ine Figure 2 for possible ways to set up cultures ria within it. Turn the fan on, uncover the and choose or design one most appropriatefor dishes, and allow the liquid from the bacterial the question you are pursuing. Also, be sure to suspension to evaporate. design and set up your experiment so that you 4. Each group of students will also be provided have at least two replicates. with a petri dish containing cellular slime mold fruiting bodies that you will use to collect Ideas for Experiments spores. Each lab group will prepare a different spore suspension for general use. In order to 1. Does a given species of cellular slime mold show prepare the spore suspension, add 8 ml of any food preference? Bonner's Salt Solution (Bonner 1947; Table 1). 2. Does a given species of bacteria vary in its Using a sterile glass elbow, gently dislodge the suitability as a food source for differentcellular fruiting bodies. Pour the resulting suspension slime molds? 566 THEAMERICAN BIOLOGY TEACHER, VOLUME 59, NO. 9, NOVEMBER/DECEMBER1997 3. Will two or more species of cellular slime mold solutions. Table 1. Recipes for culture media and directly influence each other's feeding behavior Lactose-PeptoneAgar (double strength; 2LP) on a given bacterium? If so, is the "winner" determined by the type of bacterium? Lactose 2 g 4. Will two or more species of cellular slime mold Peptone 2 g KH2PO4 0.28 g indirectly influence each other's feeding behavior Na2HPO4 0.28 g on a given bacterium? If so, is the "winner" Agar 15 g determined by the type of bacterium? cellu- Add distilled or deionized H20 up to 1 liter. Autoclave 5. Will two opposite mating type strains of a 20-25 minutes, slow exhaust (liquid cycle). (Raper 1984). lar slime mold species show any difference in food preference? Sussman's Medium (half-strength;SM/2) 6. Will two opposite mating type strains of a cellu- Glucose 0.5 g lar slime mold species indirectly influence each Peptone 0.5 g other's feeding, and if so, is the "winner" deter- Yeast extract 0.05 g mined by the type of food? MgSO4 7H20 0.05 g 7. Can two species co-exist if provided with mixed KH2PO4 0.1 g Downloaded from http://online.ucpress.edu/abt/article-pdf/59/9/565/48121/4450384.pdf by guest on 26 September 2021 K2HPO4 0.05 g bacterial suspensions? 8. After approval by your laboratory instructor, Add distilled or deionized H20 up to 100 ml. Autoclave pursue a question of your own design. 20-25 minutes, slow exhaust (liquid cycle). (Sussman 1987). Bonner's Salt Solution Materials Available for Each Group CaCl2 0.3 g (Studentsdo not need to use everything.) KCI 0.75 g NaCl 0.6 g * 10 lactose peptone plates * Cellular slime molds: Add distilled or deionized H20 up to 1 liter. Autoclave 20-25 minutes, slow exhaust (liquid cycle). (Bonner 1947). Polysphondyliumpallidum Dictyosteliumdiscoideum NC4 Why spend hundreds or even thousands of dollars for a program that is r designed to do business graphs? GraphicalAnalysis for Windows! or Macintosh" Thisaward-winning program is an inexpensive,easy-to- usetool forproducing graphs in the sciencedass. As studentsenter their data, graphs are instantly updated. Datacan also be importedfrom data collection programs orTexas Instruments graphing calculators. The program is alsogreat for helping students find the relationship : ." 9 betweenvariables. Graphs, data tables, text, and histo- fI_ Iw1 1 _r . .. .Z. gramscan all be displayedin variouswindows. Curve fits, -~~~~~~~~.S ._1 ...D 1. an examinecursor, integration, and interpolation are all available.Graphical Analysis is alsoavailable for MS-DOSand Apple IIusers! b__.ud.
Recommended publications
  • Burmese Amber Taxa
    Burmese (Myanmar) amber taxa, on-line supplement v.2021.1 Andrew J. Ross 21/06/2021 Principal Curator of Palaeobiology Department of Natural Sciences National Museums Scotland Chambers St. Edinburgh EH1 1JF E-mail: [email protected] Dr Andrew Ross | National Museums Scotland (nms.ac.uk) This taxonomic list is a supplement to Ross (2021) and follows the same format. It includes taxa described or recorded from the beginning of January 2021 up to the end of May 2021, plus 3 species that were named in 2020 which were missed. Please note that only higher taxa that include new taxa or changed/corrected records are listed below. The list is until the end of May, however some papers published in June are listed in the ‘in press’ section at the end, but taxa from these are not yet included in the checklist. As per the previous on-line checklists, in the bibliography page numbers have been added (in blue) to those papers that were published on-line previously without page numbers. New additions or changes to the previously published list and supplements are marked in blue, corrections are marked in red. In Ross (2021) new species of spider from Wunderlich & Müller (2020) were listed as being authored by both authors because there was no indication next to the new name to indicate otherwise, however in the introduction it was indicated that the author of the new taxa was Wunderlich only. Where there have been subsequent taxonomic changes to any of these species the authorship has been corrected below.
    [Show full text]
  • Biology Chapter 19 Kingdom Protista Domain Eukarya Description Kingdom Protista Is the Most Diverse of All the Kingdoms
    Biology Chapter 19 Kingdom Protista Domain Eukarya Description Kingdom Protista is the most diverse of all the kingdoms. Protists are eukaryotes that are not animals, plants, or fungi. Some unicellular, some multicellular. Some autotrophs, some heterotrophs. Some with cell walls, some without. Didinium protist devouring a Paramecium protist that is longer than it is! Read about it on p. 573! Where Do They Live? • Because of their diversity, we find protists in almost every habitat where there is water or at least moisture! Common Examples • Ameba • Algae • Paramecia • Water molds • Slime molds • Kelp (Sea weed) Classified By: (DON’T WRITE THIS DOWN YET!!! • Mode of nutrition • Cell walls present or not • Unicellular or multicellular Protists can be placed in 3 groups: animal-like, plantlike, or funguslike. Didinium, is a specialist, only feeding on Paramecia. They roll into a ball and form cysts when there is are no Paramecia to eat. Paramecia, on the other hand are generalists in their feeding habits. Mode of Nutrition Depends on type of protist (see Groups) Main Groups How they Help man How they Hurt man Ecosystem Roles KEY CONCEPT Animal-like protists = PROTOZOA, are single- celled heterotrophs that can move. Oxytricha Reproduce How? • Animal like • Unicellular – by asexual reproduction – Paramecium – does conjugation to exchange genetic material Animal-like protists Classified by how they move. macronucleus contractile vacuole food vacuole oral groove micronucleus cilia • Protozoa with flagella are zooflagellates. – flagella help zooflagellates swim – more than 2000 zooflagellates • Some protists move with pseudopods = “false feet”. – change shape as they move –Ex. amoebas • Some protists move with pseudopods.
    [Show full text]
  • Culturing Slime Mold
    Culturing Slime Mold Live Material Care Guide SCIENTIFIC BIO Background FAX! Plasmodial slime mold (phylum Myxomycota) lives in dark, moist environments such as under the bark of decaying logs, among mulch, or beneath decaying leaves. Slime mold classification is once again changing. They were in Protista due to their amoeboid-like properties. In the past, slime molds were considered a fungus because they produce fruiting bodies and spores used for reproduction. Slime molds are a group notable for its unwillingness to be neatly classified! Frequently bright in color and large in size (up to 30 cm in diameter), plasmodial slime molds consist of many amoeba-like cells, which form a mass of protoplasm called myxomycota. The organisms are capable of very slow, creeping movement by means of cytoplasmic streaming. During the reproductive stage, called pseudoplasmodium, slime molds tend to migrate to a well-lit area, such as the top of a log, where less moisture is present. They form into a slug-like mass and produce reproductive fruiting bodies, which contain spores. Under adverse conditions (lack of food, water, light, warmth, or pH changes), the organism dries out and forms a hardened mass called a sclerotium. These sclerotia may also grow fruiting bodies, but do not release spores into the environ- ment until conditions once again become favorable for growth. Spores are transported by wind, which results in the spreading of slime molds to new areas. Sclerotium (unfavorable conditions) Pseudoplasmodium (favorable conditions) Aggregate (plasmodial stage) Amoeba/spores Reproductive Fruiting Bodies Figure 1. Life Cycle of Slime Mold Culturing/Media Slime mold is typically cultured from sclerotia rather than from spores.
    [Show full text]
  • Slime Molds: Biology and Diversity
    Glime, J. M. 2019. Slime Molds: Biology and Diversity. Chapt. 3-1. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 3-1-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <https://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 3-1 SLIME MOLDS: BIOLOGY AND DIVERSITY TABLE OF CONTENTS What are Slime Molds? ....................................................................................................................................... 3-1-2 Identification Difficulties ...................................................................................................................................... 3-1- Reproduction and Colonization ........................................................................................................................... 3-1-5 General Life Cycle ....................................................................................................................................... 3-1-6 Seasonal Changes ......................................................................................................................................... 3-1-7 Environmental Stimuli ............................................................................................................................... 3-1-13 Light .................................................................................................................................................... 3-1-13 pH and Volatile Substances
    [Show full text]
  • A Brief History of the Cellular Slime Molds John Tyler Bonner Department of Ecology and Evolutionary Biology, Princeton University
    A Brief History of the Cellular Slime Molds John Tyler Bonner Department of Ecology and Evolutionary Biology, Princeton University Fungi have been known and their unique character recognized ter and that this paper was his Ph.D. work. Unfortunately, he left for as long as there has been natural history. They were known to biology, and this was his last contribution to science. Aristotle which puts an early well established mention of them From 1900 onward there were two main thrusts in cellular well over 3000 years ago. By contrast, the cellular slime molds slime mold research: one was systematics that led more recently were first discovered a mere 140 years ago. The reason for this to phylogeny, and the other is a search for the mechanisms under- great discrepancy is obvious: cellular slime molds are minute lying their development and behavior. The first has been carried and inconspicuous compared to huge, eye-catching mushrooms. out by a small group of individuals compared to the latter, which And there are other such examples all stemming from the rise of has become an industry. microscopy in the 19th century. Perhaps best of all is the stun- The discovery of new species has risen steadily. The two of ning work of Roland Thaxter, who discovered two entirely new Brefeld and a few others described by others in the latter part groups of organisms: the myxobacteria and the Laboulbeniales, of the 19th century were brought together by Olive (with some those curious fungi that were previously thought to be the hairs additions of his own) showing about a dozen species in all.
    [Show full text]
  • Comparison of ​Physarum Polycephalum​Growth Rate On
    AP Research Comparison of Physarum Polycephalum Growth Rate on ​ ​ Various Nutrients Word count: 4,003 Comparison of Physarum Polycephalum Growth Rate on Various Nutrients ​ ​ Abstract The growth rate of Physarum Polycephalum (slime mold) was measured to determine ​ ​ what type of food results in the largest increase in surface area across a petri dish. Old fashioned oat flakes, the most commonly used nutrient for slime mold, was compared against 5 other food sources to determine if there is a food other than oat flakes that could yield a higher growth rate. The growth rates were measured with time lapse cameras over the course of three days. Over the duration of the recorded growth, it was concluded that the old fashioned oat flakes yielded the highest growth rate. Introduction Slime mold is a single celled protist that is visible to the naked eye. Slime mold is naturally found in the dark, moist climates that exist on decaying leaves and logs in forest areas. The protist consumes fungal spores, bacteria, and other microbes by means of engulfing (Dagamac 2015). To find its prey, slime mold is able to explore its environment “by spontaneous and self-organised oscillatory contractions” (Jones 2015). This means that the slime mold is able to contract its body in an organized way, allowing the slime mold to slowly push itself in all directions. When a slime mold encounters a new food source, it is able to connect the new food source to it’s pre existing ones. To conserve mass, the slime mold gradually funnels the link between the food sources to a single ‘protoplasmic’ tube.
    [Show full text]
  • The Cellular Slime Mold: Eukaryotic Model Microorganism
    Exp. Anim. 58(2), 97–104, 2009 —Review— Review Series: Animal Bioresource in Japan The Cellular Slime Mold: Eukaryotic Model Microorganism Hideko URUSHIHARA Graduate School of Life and Environmental Sciences, University of Tsukuba, 1–1–1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan Abstract: Cellular slime molds are eukaryotic microorganisms in the soil. They feed on bacteria as solitary amoebae but conditionally construct multicellular forms in which cell differentiation takes place. Therefore, they are attractive for the study of fundamental biological phenomena such as phagocytosis, cell division, chemotactic movements, intercellular communication, cell differentiation, and morphogenesis. The most widely used species, Dictyostelium discoideum, is highly amenable to experimental manipulation and can be used with most recent molecular biological techniques. Its genome and cDNA analyses have been completed and well-annotated data are publicly available. A larger number of orthologues of human disease-related genes were found in D. discoideum than in yeast. Moreover, some pathogenic bacteria infect Dictyostelium amoebae. Thus, this microorganism can also offer a good experimental system for biomedical research. The resources of cellular slime molds, standard strains, mutants, and genes are maintained and distributed upon request by the core center of the National BioResource Project (NBRP-nenkin) to support Dictyostelium community users as well as new users interested in new platforms for research and/or phylogenic consideration. Key words: cell differentiation, chemotaxis, Dictyostelium discoideum, human genes, pathogen infection Introduction: Why Microorganisms? molecular cloning. Likewise, dictyostelids can offer a remarkable experimental system especially valuable for The cellular slime moulds, or dictyostelids, are soil eukaryote-specific processes in which E. coli is not in- microorganisms that exhibit conditional multicellularity volved.
    [Show full text]
  • Physarum Polycephalum (Plasmodial Slime Mold)
    Physarum polycephalum (plasmodial slime mold) Species: polycephalum Genus: Physarum Family: Physaraceae Order: Physarales Class: Myxomycetes Phylum: Mycetozoa Kingdom: Amoebozoa Conditions for Customer Ownership We hold permits allowing us to transport these organisms. To access permit conditions, click here. Never purchase living specimens without having a disposition strategy in place. There are currently no USDA permits required for this organism. In order to protect our environment, never release a live laboratory organism into the wild. Primary Hazard Considerations Always wash your hands thoroughly before and after you handle your cultures, or anything it has touched. It is recommended to use gloves when working with mold, fungus, or bacteria. Availability Physarum is available year round. Care Habitat • Plasmodial stage are shipped in a Petri dish on Physarum agar with oats. Your Physarum should be bright yellow in color, and fan shaped. If your Physarum takes on a different appearance it may be contaminated. Contaminated cultures occur when a foreign specimen (something other than Physarum) makes its way onto your culture. This culture should be stored at room temperature in a dark place. The culture should be viable for about 1–2 weeks in its current container. • Sclerotia are hardened masses of irregular form consisting of many minute cell-like components. These are shipped on cut strips of filter paper in a tube. The culture should be stored at room temperature and can be stored in this stage for several months. Care: • Physarum is subcultured onto Physarum agar, and is incubated at room temperature or 25 °C. To maintain viability, plasmodial Physarum should be subcultured weekly.
    [Show full text]
  • Chapter 19: Protists
    Chapter 19 Organizer Protists Refer to pages 4T-5T of the Teacher Guide for an explanation of the National Science Education Standards correlations. Teacher Classroom Resources Activities/FeaturesObjectivesSection MastersSection TransparenciesReproducible Reinforcement and Study Guide, p. 83 L2 Section Focus Transparency 45 L1 ELL Section 19.1 1. Identify the characteristics of Kingdom MiniLab 19-1: Observing Ciliate Motion, Section 19.1 Protista. p. 522 Critical Thinking/Problem Solving, p. 19 L3 Basic Concepts Transparency 30 L2 ELL The World of Protists 2. Compare and contrast the four groups Inside Story: A Paramecium, p. 523 The World of BioLab and MiniLab Worksheets, p. 89 L2 Reteaching Skills Transparency 29 L1 ELL National Science Education of protozoans. Problem-Solving Lab 19-1, p. 524 Protists Laboratory Manual, pp. 133-136 L2 Reteaching Skills Transparency 30 L1P ELL Standards UCP.1, UCP.2, Content Mastery, pp. 93-94, 96 L1 P UCP.5; A.1, A.2; C.1, C.4, P C.5, C.6; F.1, F.4, F.5 (1 ses- P Reinforcement and Study Guide, pp. 84-85P L2 Section Focus Transparency 46 L1 ELLP sion, 1 block) Section 19.2 LS BioLab and MiniLab Worksheets, p. 90 L2 Basic Concepts Transparency 28 L2P ELL P LS Algae: Plantlike Laboratory Manual, pp. 137-140 L2 P Basic Concepts Transparency 30 L2 ELLLS Section 19.2 3. Compare and contrast the variety of MiniLab 19-2: Going on an Algae Hunt, Protists Tech Prep Applications, pp. 27-28 PL2 LS P LS P LS plantlike protists. p. 527 Content Mastery, pp.
    [Show full text]
  • Inferring Ancestry
    Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1176 Inferring Ancestry Mitochondrial Origins and Other Deep Branches in the Eukaryote Tree of Life DING HE ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 ISBN 978-91-554-9031-7 UPPSALA urn:nbn:se:uu:diva-231670 2014 Dissertation presented at Uppsala University to be publicly examined in Fries salen, Evolutionsbiologiskt centrum, Norbyvägen 18, 752 36, Uppsala, Friday, 24 October 2014 at 10:30 for the degree of Doctor of Philosophy. The examination will be conducted in English. Faculty examiner: Professor Andrew Roger (Dalhousie University). Abstract He, D. 2014. Inferring Ancestry. Mitochondrial Origins and Other Deep Branches in the Eukaryote Tree of Life. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1176. 48 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9031-7. There are ~12 supergroups of complex-celled organisms (eukaryotes), but relationships among them (including the root) remain elusive. For Paper I, I developed a dataset of 37 eukaryotic proteins of bacterial origin (euBac), representing the conservative protein core of the proto- mitochondrion. This gives a relatively short distance between ingroup (eukaryotes) and outgroup (mitochondrial progenitor), which is important for accurate rooting. The resulting phylogeny reconstructs three eukaryote megagroups and places one, Discoba (Excavata), as sister group to the other two (neozoa). This rejects the reigning “Unikont-Bikont” root and highlights the evolutionary importance of Excavata. For Paper II, I developed a 150-gene dataset to test relationships in supergroup SAR (Stramenopila, Alveolata, Rhizaria). Analyses of all 150-genes give different trees with different methods, but also reveal artifactual signal due to extremely long rhizarian branches and illegitimate sequences due to horizontal gene transfer (HGT) or contamination.
    [Show full text]
  • Chapter 16 Outline
    CHAPTER 16 Microbial Life: Prokaryotes and Protists Chapter Objectives Prokaryotes 16.1 Describe the diversity, abundance, and importance of prokaryotic life. 16.2 Compare the different shapes, cell walls, and projections of prokaryotes. 16.3 Explain how bacteria can evolve quickly and how bacteria can survive stressful environments. 16.4 Describe the types of nutritional diversity found in prokaryotes. 16.5 Explain why biofilms are unique and potentially dangerous to human health. 16.6 Explain how prokaryotes are employed to address the needs of human society. 16.7 Compare the three domains of life based on differences in cellular and biochemical traits. 16.8 Describe the diverse types of Archaea living in extreme and more moderate environments. 16.9 Distinguish between the five subgroups of the domain Bacteria, noting the particular structure, special features, and habitats of each group. 16.10 Describe some of the diseases associated with bacteria. Distinguish between exotoxins and en- dotoxins, noting examples of each. 16.11 Describe the four parts of Koch’s postulates. Explain how Marshall was able to demonstrate that the bacterium Helicobacter pylori can cause gastritis. Protists 16.12 Describe the basic types of protists. Explain why biologists currently think that they represent many clades. 16.13 Explain how primary endosymbiosis and secondary endosymbiosis led to further cellular diversity. 16.14 Describe and compare the groups that together form the supergroup SAR. 16.15 Explain how cultured algae may be used as renewable fuels and the current challenges that re- main. 16.16–16.18 Describe and distinguish between the Excavata, Unikonta, and Archaeplastida groups.
    [Show full text]
  • A Would-Be Nervous System Made from a Slime Mold
    A Would-Be Nervous System Andrew Adamatzky** Made from a Slime Mold University of the West of England Keywords Slime mold, nervous system, unconventional computing Abstract The slime mold Physarum polycephalum is a huge single cell that has proved to be a fruitful material for designing novel computing architectures. The slime mold is capable of sensing tactile, chemical, and optical stimuli and converting them to characteristic patterns of its electrical potential oscillations. The electrical responses to stimuli may propagate along protoplasmic tubes for distances exceeding tens of centimeters, as impulses in neural pathways do. A slime mold makes decisions about its propagation direction based on information fusion from thousands of spatially extended protoplasmic loci, similarly to a neuron collecting information from its dendritic tree. The analogy is distant yet inspiring. We speculate on whether alternative—would-be—nervous systems can be developed and practically implemented from the slime mold. We uncover analogies between the slime mold and neurons, and demonstrate that the slime mold can play the roles of primitive mechanoreceptors, photoreceptors, and chemoreceptors; we also show how the Physarum neural pathways develop. The results constituted the first step towards experimental laboratory studies of nervous system implementation in slime molds. 1 Introduction The plasmodium of Physarum polycephalum (order Physarales, class Myxomecetes, subclass Myxo- gastromycetidae) is a single cell, visible with the naked eye, with many diploid nuclei [63]. The plasmodium feeds on bacteria and microscopic food particles by endocytosis. When placed in an environment with distributed sources of nutrients, the plasmodium forms a network of proto- plasmic tubes connecting the food sources (Figure 1a).
    [Show full text]