Cretaceous Research 113 (2020) 104496
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Appendix A. Supplementary Material
Appendix A. Supplementary material Comprehensive taxon sampling and vetted fossils help clarify the time tree of shorebirds (Aves, Charadriiformes) David Cernˇ y´ 1,* & Rossy Natale2 1Department of the Geophysical Sciences, University of Chicago, Chicago 60637, USA 2Department of Organismal Biology & Anatomy, University of Chicago, Chicago 60637, USA *Corresponding Author. Email: [email protected] Contents 1 Fossil Calibrations 2 1.1 Calibrations used . .2 1.2 Rejected calibrations . 22 2 Outgroup sequences 30 2.1 Neornithine outgroups . 33 2.2 Non-neornithine outgroups . 39 3 Supplementary Methods 72 4 Supplementary Figures and Tables 74 5 Image Credits 91 References 99 1 1 Fossil Calibrations 1.1 Calibrations used Calibration 1 Node calibrated. MRCA of Uria aalge and Uria lomvia. Fossil taxon. Uria lomvia (Linnaeus, 1758). Specimen. CASG 71892 (referred specimen; Olson, 2013), California Academy of Sciences, San Francisco, CA, USA. Lower bound. 2.58 Ma. Phylogenetic justification. As in Smith (2015). Age justification. The status of CASG 71892 as the oldest known record of either of the two spp. of Uria was recently confirmed by the review of Watanabe et al. (2016). The younger of the two marine transgressions at the Tolstoi Point corresponds to the Bigbendian transgression (Olson, 2013), which contains the Gauss-Matuyama magnetostratigraphic boundary (Kaufman and Brigham-Grette, 1993). Attempts to date this reversal have been recently reviewed by Ohno et al. (2012); Singer (2014), and Head (2019). In particular, Deino et al. (2006) were able to tightly bracket the age of the reversal using high-precision 40Ar/39Ar dating of two tuffs in normally and reversely magnetized lacustrine sediments from Kenya, obtaining a value of 2.589 ± 0.003 Ma. -
Insight Into the Evolution of Avian Flight from a New Clade of Early
J. Anat. (2006) 208, pp287–308 IBlackwnell Publishing sLtd ight into the evolution of avian flight from a new clade of Early Cretaceous ornithurines from China and the morphology of Yixianornis grabaui Julia A. Clarke,1 Zhonghe Zhou2 and Fucheng Zhang2 1Department of Marine, Earth and Atmospheric Sciences, North Carolina State University, Raleigh, NC, USA 2Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, China Abstract In studies of the evolution of avian flight there has been a singular preoccupation with unravelling its origin. By con- trast, the complex changes in morphology that occurred between the earliest form of avian flapping flight and the emergence of the flight capabilities of extant birds remain comparatively little explored. Any such work has been limited by a comparative paucity of fossils illuminating bird evolution near the origin of the clade of extant (i.e. ‘modern’) birds (Aves). Here we recognize three species from the Early Cretaceous of China as comprising a new lineage of basal ornithurine birds. Ornithurae is a clade that includes, approximately, comparatively close relatives of crown clade Aves (extant birds) and that crown clade. The morphology of the best-preserved specimen from this newly recognized Asian diversity, the holotype specimen of Yixianornis grabaui Zhou and Zhang 2001, complete with finely preserved wing and tail feather impressions, is used to illustrate the new insights offered by recognition of this lineage. Hypotheses of avian morphological evolution and specifically proposed patterns of change in different avian locomotor modules after the origin of flight are impacted by recognition of the new lineage. -
Sind Vögel Dinosaurier? Eine Kritische Analyse Fossiler Befunde
W+W Special Paper B-19-4 SIND VÖGEL DINOSAURIER? EINE KRITISCHE ANALYSE FOSSILER BEFUNDE Reinhard Junker August 2019 https://www.wort-und-wissen.de/artikel/sp/b-19-4_dinos-voegel.pdf Bild: Ein rekonstruiertes und künstlerisch dargestelltes Paar von Microraptor gui (Dromaeosauridae , Micro raptorinae). (durbed.deviantart.com, CC BY-SA 3.0) Sind Vögel Dinosaurier? Inhalt 1. Einleitung ...................................................................................... 3. kompakt ..................................................................................................... 4 Methodische Vorbemerkungen ............................................................................... 5 Zitate zu schrittweisem Erwerb von Vogelmerkmalen ...................................................... 6 2. Vogelmerkmale bei Theropoden: Vorläufer oder Konvergenzen ............................................................................... 9 2.1 Federtypen und Flugfähigkeit ..................................................................... 9 2.2 Zähne und Schnabel ................................................................................ 14 Zitate zu Konvergenzen bei Zahnverlust und Ausbildung eines Schnabels ................15 2.3 Gehirn und EQ ........................................................................................ 17 2.4 Furkula ..................................................................................................... 18 2.5 Gastralia, Rippenkorb, Brustbein .............................................................. -
The Effect of Long-Term Atmospheric Changes on the Macroevolution of Birds
Archived at the Flinders Academic Commons: http://dspace.flinders.edu.au/dspace/ ‘This is the peer reviewed version of the following article: Serrano, F. J., Chiappe, L. M., Palmqvist, P., Figueirido, B., Long, J., & Sanz, J. L. (2019). The effect of long-term atmospheric changes on the macroevolution of birds. Gondwana Research, 65, 86–96. https://doi.org/10.1016/ j.gr.2018.09.002 which has been published in final form at https://doi.org/10.1016/j.gr.2018.09.002 © 2018 Elsevier Ltd. This manuscript version is made available under the CC-BY-NC-ND 4.0 license: http://creativecommons.org/licenses/by-nc-nd/4.0/ Accepted Manuscript The effect of long-term atmospheric changes on the macroevolution of birds Francisco José Serrano, Luis María Chiappe, Paul Palmqvist, Borja Figueirido, John Long, José Luis Sanz PII: S1342-937X(18)30229-6 DOI: doi:10.1016/j.gr.2018.09.002 Reference: GR 2018 To appear in: Gondwana Research Received date: 18 March 2018 Revised date: 12 September 2018 Accepted date: 12 September 2018 Please cite this article as: Francisco José Serrano, Luis María Chiappe, Paul Palmqvist, Borja Figueirido, John Long, José Luis Sanz , The effect of long-term atmospheric changes on the macroevolution of birds. Gr (2018), doi:10.1016/j.gr.2018.09.002 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. -
On the Preservation of the Beak in Confuciusornis (Aves: Pygostylia)
diversity Article On the Preservation of the Beak in Confuciusornis (Aves: Pygostylia) Amanda Falk 1, Jingmai O’Connor 2,3,* , Min Wang 2,3 and Zhonghe Zhou 2,3,* 1 Biology Department, Centre College, 600 W. Walnut St. Danville, KY 40422, USA; [email protected] 2 Key Laboratory of Vertebrate Evolution and Human Origins of the Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Beijing 100044, China; [email protected] 3 CAS Center for Excellence in Life and Paleoenvironment, Beijing 10010, China * Correspondence: [email protected] (J.O.); [email protected] (Z.Z.) Received: 27 October 2019; Accepted: 10 November 2019; Published: 11 November 2019 Abstract: The Confuciusornithiformes represent the most stem-ward avian occurrence of an edentulous rostrum. Although a keratinous beak is widely considered to have covered the rostrum in confuciusornithiforms, this feature is almost never preserved, having been previously reported only in the holotype of Confuciusornis dui and the holotype of Eoconfuciusornis zhengi. This strongly contrasts with the widespread preservation of the keratinous sheaths that cover the manual and pedal ungual phalanges. Here, we report on a third occurrence of a preserved rhamphotheca in a specimen of Confuciusornis sanctus. We illuminated the preserved traces using laser-stimulated fluorescence. Similarly to E. zhengi, the rhamphotheca has been preserved only as a two-dimensional trace, whereas ungual sheaths are preserved in three dimensions. In contrast to the traces preserved in C. dui, the rhamphotheca in the discussed specimen of C. sanctus is straight rather than upturned. This hints towards hidden morphological diversity within the thousands of Confuciusornis specimens, in which species may be further differentiated by soft tissue features or behaviors, much like many living birds, that cannot be detected in fossils, even with exceptional preservation. -
The Oldest Record of Ornithuromorpha from the Early Cretaceous of China
ARTICLE Received 6 Jan 2015 | Accepted 20 Mar 2015 | Published 5 May 2015 DOI: 10.1038/ncomms7987 OPEN The oldest record of ornithuromorpha from the early cretaceous of China Min Wang1, Xiaoting Zheng2,3, Jingmai K. O’Connor1, Graeme T. Lloyd4, Xiaoli Wang2,3, Yan Wang2,3, Xiaomei Zhang2,3 & Zhonghe Zhou1 Ornithuromorpha is the most inclusive clade containing extant birds but not the Mesozoic Enantiornithes. The early evolutionary history of this avian clade has been advanced with recent discoveries from Cretaceous deposits, indicating that Ornithuromorpha and Enantiornithes are the two major avian groups in Mesozoic. Here we report on a new ornithuromorph bird, Archaeornithura meemannae gen. et sp. nov., from the second oldest avian-bearing deposits (130.7 Ma) in the world. The new taxon is referable to the Hongshanornithidae and constitutes the oldest record of the Ornithuromorpha. However, A. meemannae shows few primitive features relative to younger hongshanornithids and is deeply nested within the Hongshanornithidae, suggesting that this clade is already well established. The new discovery extends the record of Ornithuromorpha by five to six million years, which in turn pushes back the divergence times of early avian lingeages into the Early Cretaceous. 1 Key Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing 100044, China. 2 Institue of Geology and Paleontology, Linyi University, Linyi, Shandong 276000, China. 3 Tianyu Natural History Museum of Shandong, Pingyi, Shandong 273300, China. 4 Department of Biological Sciences, Faculty of Science, Macquarie University, Sydney, New South Wales 2019, Australia. -
Written in Stone
112 W RITTENIN S TONE had yet been undertaken (the fossil had only come to the attention of Canadian paleontologist Phil Currie and paleo-artist Michael Skrepnick two weeks earlier), the specimen confirmed the connection between dino- saurs and birds that had been proposed on bones alone. The new dino- saur was dubbed Sinosauropteryx, and it had come from Cretaceous deposits in China that exhibited a quality of preservation that exceeded that of the Solnhofen limestone. Sinosauropteryx was only the first feathered dinosaur to be an- nounced. A panoply of feathered fossils started to turn up in the Jurassic and Cretaceous strata of China, each just as magnificent as the one be- fore. There were early birds that still retained clawed hands (Confuciu- sornis) and teeth (Sapeornis, Jibeinia), while non-flying coelurosaurs such as Caudipteryx, Sinornithosaurus, Jinfengopteryx, Dilong, and Beipiaosaurus wore an array of body coverings from wispy fuzz to full flight feathers. The fossil feathers of the strange, stubby-armed dinosaur Shuvuuia even preserved the biochemical signature of beta-keratin, a protein present in the feathers of living birds, and quill knobs on the forearm of Velociraptor reported in 2007 confirmed that the famous predator was covered in feathers, too. As new discoveries continued to accumulate it became apparent that almost every group of coelurosaurs had feathered representatives, from the weird secondarily herbivorous forms such as Beipiaosaurus to Dilong, an early relative of Tyrannosaurus. It is even possible that, FIGURE 37 - A Velociraptor attempts to catch the early bird Confuciusornis. Both were feathered dinosaurs. 113 Footprints and Feathers during its early life, the most famous of the flesh-tearing dinosaurs may have been covered in a coat of dino-fuzz. -
An Evaluation of Flapping-Based Locomotory Hypotheses in Bird
The wings before the bird: an evaluation of flapping-based locomotory hypotheses in bird antecedents T. Alexander Dececchi1, Hans C.E. Larsson2 and Michael B. Habib3,4 1 Department of Geological Sciences, Queens University, Kingston, Ontario, Canada 2 Redpath Museum, McGill University, Montreal, Quebec, Canada 3 Keck School of Medicine of USC, Department of Cell and Neurobiology, University of Southern California, Los Angeles, California, United States 4 Dinosaur Institute, Natural History Museum of Los Angeles, Los Angeles, CA, United States ABSTRACT Background: Powered flight is implicated as a major driver for the success of birds. Here we examine the effectiveness of three hypothesized pathways for the evolution of the flight stroke, the forelimb motion that powers aerial locomotion, in a terrestrial setting across a range of stem and basal avians: flap running, Wing Assisted Incline Running (WAIR), and wing-assisted leaping. Methods: Using biomechanical mathematical models based on known aerodynamic principals and in vivo experiments and ground truthed using extant avians we seek to test if an incipient flight stroke may have contributed sufficient force to permit flap running, WAIR, or leaping takeoff along the phylogenetic lineage from Coelurosauria to birds. Results: None of these behaviours were found to meet the biomechanical threshold requirements before Paraves. Neither was there a continuous trend of refinement for any of these biomechanical performances across phylogeny nor a signal of universal applicability near the origin of birds. None of these flap-based locomotory models appear to have been a major influence on pre-flight character acquisition such as pennaceous feathers, suggesting non-locomotory behaviours, and less Submitted 23 January 2016 stringent locomotory behaviours such as balancing and braking, played a role in Accepted 27 May 2016 the evolution of the maniraptoran wing and nascent flight stroke. -
And Sapeornis (Aves) and the Complex Early Evolution of the Avian Sternum
On the absence of sternal elements in Anchiornis (Paraves) and Sapeornis (Aves) and the complex early evolution of the avian sternum Xiaoting Zhenga,b, Jingmai O’Connorc,1, Xiaoli Wanga, Min Wangc, Xiaomei Zhangb, and Zhonghe Zhouc,1 aInstitute of Geology and Paleontology, Linyi University, Linyi, Shandong 276000, China; bShandong Tianyu Museum of Nature, Pingyi, Shandong 273300, China; and cKey Laboratory of Vertebrate Evolution and Human Origins of the Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing 100044, China Contributed by Zhonghe Zhou, June 14, 2014 (sent for review April 13, 2014) Anchiornis (Deinonychosauria: Troodontidae), the earliest known inferred importance of the sternum as part of the avian flight feathered dinosaur, and Sapeornis (Aves: Pygostylia), one of the apparatus and at odds with the phylogenetic distribution of os- basalmost Cretaceous birds, are both known from hundreds of sified sterna among maniraptoran theropods. All other groups specimens, although remarkably not one specimen preserves any that are or have been considered closely related to birds (Scan- sternal ossifications. We use histological analysis to confirm the soriopterygidae, Dromaeosauridae, and Oviraptorosauria) pos- absence of this element in adult specimens. Furthermore, the excel- sess paired, ossified sternal plates that fuse into a singular lent preservation of soft-tissue structures in some specimens sug- element (sternum) late in ontogeny in at least some taxa (e.g., gests that no chondrified sternum was present. Archaeopteryx,the dromaeosaurid Microraptor, oviraptorosaur Ingenia) (16–19). oldest and most basal known bird, is known from only 10 specimens Admittedly, the sternum is not one of the best-known skeletal and the presence of a sternum is controversial; a chondrified ster- elements in these clades; the presence of sternal plates is af- num is widely considered to have been present. -
On the Absence of Sternal Elements in Anchiornis (Paraves) and Sapeornis (Aves) and the Complex Early Evolution of the Avian Sternum
On the absence of sternal elements in Anchiornis (Paraves) and Sapeornis (Aves) and the complex early evolution of the avian sternum Xiaoting Zhenga,b, Jingmai O’Connorc,1, Xiaoli Wanga, Min Wangc, Xiaomei Zhangb, and Zhonghe Zhouc,1 aInstitute of Geology and Paleontology, Linyi University, Linyi, Shandong 276000, China; bShandong Tianyu Museum of Nature, Pingyi, Shandong 273300, China; and cKey Laboratory of Vertebrate Evolution and Human Origins of the Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing 100044, China Contributed by Zhonghe Zhou, June 14, 2014 (sent for review April 13, 2014) Anchiornis (Deinonychosauria: Troodontidae), the earliest known inferred importance of the sternum as part of the avian flight feathered dinosaur, and Sapeornis (Aves: Pygostylia), one of the apparatus and at odds with the phylogenetic distribution of os- basalmost Cretaceous birds, are both known from hundreds of sified sterna among maniraptoran theropods. All other groups specimens, although remarkably not one specimen preserves any that are or have been considered closely related to birds (Scan- sternal ossifications. We use histological analysis to confirm the soriopterygidae, Dromaeosauridae, and Oviraptorosauria) pos- absence of this element in adult specimens. Furthermore, the excel- sess paired, ossified sternal plates that fuse into a singular lent preservation of soft-tissue structures in some specimens sug- element (sternum) late in ontogeny in at least some taxa (e.g., gests that no chondrified sternum was present. Archaeopteryx,the dromaeosaurid Microraptor, oviraptorosaur Ingenia) (16–19). oldest and most basal known bird, is known from only 10 specimens Admittedly, the sternum is not one of the best-known skeletal and the presence of a sternum is controversial; a chondrified ster- elements in these clades; the presence of sternal plates is af- num is widely considered to have been present. -
Of All the Early Birds, Only One Lineage Survived by Susan Milius
DINO DOOMSDAY LuckyThe Ones Of all the early birds, only one lineage survived By Susan Milius he asteroid strike (or was it the roiling volcanoes?) avian (in the Avialae/Aves group) by about 165 million to that triggered dino doomsday 66 million years ago 150 million years ago. That left plenty of time for bona fide also brought an avian apocalypse. Birds had evolved birds to diversify before the great die-off. T by then, but only some had what it took to survive. The bird pioneers included the once widespread and abun- Biologists now generally accept birds as a kind of dinosaur, dant Enantiornithes, or “opposite birds.” Compared with just as people are a kind of mammal. Much of what we think modern birds, their ball-and-socket shoulder joints were of as birdlike traits — bipedal stance, feathers, wishbones and “backwards,” with ball rather than socket on the scapula. so on — are actually dinosaur traits that popped up here and These ancient alt birds may have gone down in the big there in the vast doomed branches of the dino family tree. In extinction that left only fish, amphibians, mammals and a the diagram at right, based on one from paleontologist few reptile lineages (including birds) among vertebrates. Stephen Brusatte of the University of Edinburgh and col- There’s not a lot of information to go on. “The fossil record leagues, anatomical icons give a rough idea of when some of of birds is pretty bad,” Brusatte says. “But I think those lin- these innovations emerged. eages that go up to the red horizontal line of doom in my fig- One branch of the dinosaur tree gradually turned arguably ure are ones that died in the impact chaos.” s 1 2 Microraptor dinosaurs were relatives of the velociraptors that (in ridiculously oversized form) put the screaming gotchas into Jurassic Park. -
Postcranial Skeletal Anatomy of the Holotype and Referred
Postcranial skeletal anatomy of the holotype and referred specimens of Buitreraptor gonzalezorum Makovicky, Apesteguı´a and Agnolı´n 2005 (Theropoda, Dromaeosauridae), from the Late Cretaceous of Patagonia Federico A. Gianechini1, Peter J. Makovicky2,*, Sebastia´n Apesteguı´a3,* and Ignacio Cerda4,* 1 Instituto Multidisciplinario de Investigaciones Biolo´gicas (IMIBIO-SL), CONICET— Universidad Nacional de San Luis, San Luis, Argentina 2 Section of Earth Sciences, Integrative Research Center, Field Museum of Natural History, Chicago, IL, USA 3 CONICET, Fundacio´n de Historia Natural ‘Fe´lix de Azara’, CEBBAD, Universidad Maimo´nides, Buenos Aires, Argentina 4 CONICET, Instituto de Investigacio´n en Paleobiologı´a y Geologı´a, Universidad Nacional de Rı´o Negro, General Roca, Rı´o Negro, Argentina * These authors contributed equally to this work. ABSTRACT Here we provide a detailed description of the postcranial skeleton of the holotype and referred specimens of Buitreraptor gonzalezorum. This taxon was recovered as an unenlagiine dromaeosaurid in several recent phylogenetic studies and is the best represented Gondwanan dromaeosaurid discovered to date. It was preliminarily described in a brief article, but a detailed account of its osteology is emerging in recent works. The holotype is the most complete specimen yet found, so an exhaustive description of it provides much valuable anatomical information. The Submitted 18 January 2018 holotype and referred specimens preserve the axial skeleton, pectoral and pelvic Accepted 9 March 2018 girdles, and both fore- and hindlimbs. Diagnostic postcranial characters of this taxon Published 26 March 2018 include: anterior cervical centra exceeding the posterior limit of neural arch; eighth Corresponding author and ninth cervical vertebral centra with lateroventral tubercles; pneumatic foramina Federico A.