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BLS Bulletin 111 Winter 2012.Pdf
1 BRITISH LICHEN SOCIETY OFFICERS AND CONTACTS 2012 PRESIDENT B.P. Hilton, Beauregard, 5 Alscott Gardens, Alverdiscott, Barnstaple, Devon EX31 3QJ; e-mail [email protected] VICE-PRESIDENT J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SECRETARY C. Ellis, Royal Botanic Garden, 20A Inverleith Row, Edinburgh EH3 5LR; email [email protected] TREASURER J.F. Skinner, 28 Parkanaur Avenue, Southend-on-Sea, Essex SS1 3HY, email [email protected] ASSISTANT TREASURER AND MEMBERSHIP SECRETARY H. Döring, Mycology Section, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] REGIONAL TREASURER (Americas) J.W. Hinds, 254 Forest Avenue, Orono, Maine 04473-3202, USA; email [email protected]. CHAIR OF THE DATA COMMITTEE D.J. Hill, Yew Tree Cottage, Yew Tree Lane, Compton Martin, Bristol BS40 6JS, email [email protected] MAPPING RECORDER AND ARCHIVIST M.R.D. Seaward, Department of Archaeological, Geographical & Environmental Sciences, University of Bradford, West Yorkshire BD7 1DP, email [email protected] DATA MANAGER J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SENIOR EDITOR (LICHENOLOGIST) P.D. Crittenden, School of Life Science, The University, Nottingham NG7 2RD, email [email protected] BULLETIN EDITOR P.F. Cannon, CABI and Royal Botanic Gardens Kew; postal address Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] CHAIR OF CONSERVATION COMMITTEE & CONSERVATION OFFICER B.W. Edwards, DERC, Library Headquarters, Colliton Park, Dorchester, Dorset DT1 1XJ, email [email protected] CHAIR OF THE EDUCATION AND PROMOTION COMMITTEE: S. -
Tesis Salvador Chiva 160120 Portada
TESIS DOCTORAL PATRONES DE SELECCIÓN DE MICROALGAS EN COMUNIDADES DE LÍQUENES TERRÍCOLAS EN BIOCOSTRAS Salvador Chiva Natividad Departamento de Botánica y Geología TESIS DOCTORAL PATRONES DE SELECCIÓN DE MICROALGAS EN COMUNIDADES DE LÍQUENES TERRÍCOLAS EN BIOCOSTRAS JOSÉ SALVADOR CHIVA NATIVIDAD Directora/Tutora: Eva Barreno Rodríguez Directora: Patricia Moya Gay Directora: Arantzazu Molins Piqueres Programa de Doctorado en Biodiversidad y Biología Evolutiva Valencia, enero 2020 Departamento de Botánica y Geología Tesis presentada por José Salvador Chiva Natividad para optar al grado de Doctor en Ciencias Biológicas por la Universitat de València, con el título: Patrones de selección de microalgas en comunidades de líquenes terrícolas en biocostras Firmado: José Salvador Chiva Natividad La Dra. Eva Barreno Rodríguez, Catedrática del Departamento de Botánica y Geología de la Facultad de Ciencias Biológicas de la Universitat de València; la Dra. Patricia Moya Gay y la Dra. Arantzazu Molins Piqueres. Certifican que el licenciado en Biología José Salvador Chiva Natividad ha realizado bajo su dirección el trabajo Patrones de selección de microalgas en comunidades de líquenes terrícolas en biocostras, y autorizan su presentación para optar al título de Doctor de la Universitat de València. Y para que así conste, en cumplimiento de la legislación vigente, fi rmamos el presente certifi cado en Burjassot, en octubre de 2019. Fdo.: Eva Barreno Rodríguez Fdo.: Patricia Moya Gay Fdo.: Arantzazu Molins Piqueres Directora/ Tutora de la Tesis Directora de la Tesis Directora de la Tesis Departamento de Botánica y Geología La Dra. Eva Barreno Rodríguez, Catedrática del Departamento de Botánica y Geología de la Facultad de Ciencias Biológicas de la Universitat de València; la Dra. -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
http://www.diva-portal.org This is the published version of a paper published in Fungal diversity. Citation for the original published paper (version of record): Prieto, M., Wedin, M. (2016) Phylogeny, taxonomy and diversification events in the Caliciaceae.. Fungal diversity https://doi.org/10.1007/s13225-016-0372-y Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-2031 Fungal Diversity (2017) 82:221–238 DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 /Published online: 1 August 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
Fungal Diversity (2017) 82:221–238 DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 /Published online: 1 August 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. Alternative fossil assignments resulted in very different time es- Caliciaceae is one of several ascomycete groups characterized timates and the comparison with the analysis based on a second- by producing prototunicate (thin-walled and evanescent) asci ary calibration demonstrates that the most likely placement of the and a mazaedium (an accumulation of loose, maturing spores fossil is close to a terminal node rather than a basal placement in covering the ascoma surface). -
Artifical Keys to the Lichenicolous Fungi of Great Britain, Ireland, the Channel Islands, Iberian Peninsula, and Canary Islands
i DRAFT Artifical Keys to the Lichenicolous Fungi of Great Britain, Ireland, the Channel Islands, Iberian Peninsula, and Canary Islands Fourth Draft Edition for Testing Only David L Hawksworth, Violetta Atienza & Brian J Coppins © Copyright, the authors, 2010 18 August 2010 2 Introduction These draft keys were initially developed for use on a British Mycological Society/British Lichen Society joint workshop held in Lyndhurst in the New Forest (Hampshire, UK) in February 1998. They were based on the keys I published in the Lichenologist in 1983 which dealt with 218 species of fungi growing on lichens in the British Isles which were lichen- forming, commensalistic, parasitic, or saprobic; it also included line-drawings of the spores on 141 species. However, Violetta Atienza (Universidad de Valencia, Spain) had been collaborating with me at the then International Mycological Institute (Egham, Surrey, UK) and in preparing the keys for the 1998 course we decided also to cover additional species also in Spain (including the Canary Islands). This was done in order to increase the number of species covered in order to facilitate the identification of specimens - fungi known or described from one region would often subsequently turn up in the other. In making the revision, I was especially pleased to recruit the assistance of Brian J Coppins (Royal Botanic Garden, Edinburgh, UK) who worked with me on the 1998 workshop. The drafts prepared in 1998 were circulated to various colleagues for comment, and have also been used on courses, such those at Eagle Hill (Maine, USA) in 2001 and 2008, and also by individuals to whom copies were made available. -
Els Líquens Saxícoles I Terrícoles Del Parc Natural De Cap De Creus, Amb Un Estudi Filogenètic Aplicat a La Sistemàtica Dels Gèneres Diploschistes I Ingvariella
Els líquens saxícoles i terrícoles del Parc Natural de Cap de Creus, amb un estudi filogenètic aplicat a la sistemàtica dels gèneres Diploschistes i Ingvariella Samantha Fernández Brime Aquesta tesi doctoral està subjecta a la llicència Reconeixement- NoComercial – SenseObraDerivada 3.0. Espanya de Creative Commons. Esta tesis doctoral está sujeta a la licencia Reconocimiento - NoComercial – SinObraDerivada 3.0. España de Creative Commons. This doctoral thesis is licensed under the Creative Commons Attribution-NonCommercial- NoDerivs 3.0. Spain License. Els líquens saxícoles i terrícoles del Parc Natural de Cap de Creus, amb un estudi logenètic aplicat a la sistemàtica dels gèneres Diploschistes i Ingvariella TESI DOCTORAL Samantha Fernández Brime Barcelona 2012 Els líquens saxícoles i terrícoles del Parc Natural de Cap de Creus, amb un estudi filogenètic aplicat a la sistemàtica dels gèneres Diploschistes i Ingvariella Memòria presentada per Samantha Fernández Brime per optar al grau de Doctor per la Universitat de Barcelona Programa de Doctorat de Biologia Vegetal corresponent al bienni 2005-2007 del Departament de Biologia Vegetal de la Facultat de Biologia de la Universitat de Barcelona Directors: Dr. Francesc Xavier Llimona Pagès i Dra. Ester Gaya Bellés Doctoranda Vist-i-plau dels directors de la tesi Samantha Fernández Brime Dr. Xavier Llimona Pagès Dra. Ester Gaya Bellés Barcelona, Gener de 2012 Als meus pares i al meu germà. Y a Ricardo. Where ferns or flowers could find no safety from the drenching showers, there hung they brilliant lichens, and the sun bade radiant hues dwell on them Jessie M. E. Saxby Índex AGRAÏMENTS i INTRODUCCIÓ 1 1. Introducció al treball florístic 3 1.1. -
An Inventory of Fungal Diversity in Ohio Research Thesis Presented In
An Inventory of Fungal Diversity in Ohio Research Thesis Presented in partial fulfillment of the requirements for graduation with research distinction in the undergraduate colleges of The Ohio State University by Django Grootmyers The Ohio State University April 2021 1 ABSTRACT Fungi are a large and diverse group of eukaryotic organisms that play important roles in nutrient cycling in ecosystems worldwide. Fungi are poorly documented compared to plants in Ohio despite 197 years of collecting activity, and an attempt to compile all the species of fungi known from Ohio has not been completed since 1894. This paper compiles the species of fungi currently known from Ohio based on vouchered fungal collections available in digitized form at the Mycology Collections Portal (MyCoPortal) and other online collections databases and new collections by the author. All groups of fungi are treated, including lichens and microfungi. 69,795 total records of Ohio fungi were processed, resulting in a list of 4,865 total species-level taxa. 250 of these taxa are newly reported from Ohio in this work. 229 of the taxa known from Ohio are species that were originally described from Ohio. A number of potentially novel fungal species were discovered over the course of this study and will be described in future publications. The insights gained from this work will be useful in facilitating future research on Ohio fungi, developing more comprehensive and modern guides to Ohio fungi, and beginning to investigate the possibility of fungal conservation in Ohio. INTRODUCTION Fungi are a large and very diverse group of organisms that play a variety of vital roles in natural and agricultural ecosystems: as decomposers (Lindahl, Taylor and Finlay 2002), mycorrhizal partners of plant species (Van Der Heijden et al. -
Panarctic Lichen Checklist
Hörður Kristinsson, Eric Steen Hansen and Mikhail Zhurbenko: Panarctic lichen checklist Database compiled at the initiative of CAFF -Flora group Outprint of 22. Dec. 2006 PDF created with pdfFactory Pro trial version www.pdffactory.com LAND NoCode Region 1 PU Polar Ural-Vaigach Island 2 YG Yamal-Gydan 3 SZ Severnaya Zemlya 4 Ta Taimyr Peninsula 5 AO Anabar-Olenyek 6 Kh Kharaulakh 7 NS Novosibirskie Islands 8 YK Yana-Kolyma 9 CC Chukotka West 10 WI Wrangel Island 11 SC Chukotka South 12 BC Chukotka East 13 BI Beringian Islands 14 BA Beringian Alaska 15 AN Alaska North 16 CC Central Canadian Arctic 17 WH West Hudsonian 18 BL Baffin Island, Labrador 19 El Ellesmere 20 GW Greenland West 21 GN Greenland North 22 GE Greenland East 23 AI Arctic Iceland 24 JM Jan Mayen 25 Sv Svalbard 26 Be Bear Islands 27 No Arctic Norway 28 Ko Kola Peninsula 29 ZF Franz-Josef Land 30 KP Kanin-Pechora 31 NZ Novaya Zemlya Page 1 PDF created with pdfFactory Pro trial version www.pdffactory.com Caff flora group Panarctic lichen checklist 22.12.2006 TEGNAFN PUYGSZTaAOKhNSYK WC WISCBCBIBAANCC WH BLEl GW GNGEAIJMSvBeNoKoZFKPNZ Abrothallus bertianus* x Abrothallus parmeliarum* x x Absconditella delutula x Acanthonitschkea peltigericola x Acarospora almquistii x Acarospora badiofusca x x x x x x x x x Acarospora brunneola x Acarospora bullata x Acarospora cartilaginea x x Acarospora cervina x x Acarospora discreta x x Acarospora friesii x Acarospora fuscata x x x x x x x x x x x x x Acarospora glaucocarpa x x x x x x x x x x x x x Acarospora glaucocarpa var. -
Divergent Histories of Rdna Group I Introns in the Lichen Family Physciaceae
J Mol Evol (2005) 60:434–446 DOI: 10.1007/s00239-004-0152-2 Divergent Histories of rDNA Group I Introns in the Lichen Family Physciaceae Dawn Simon,1 Jessica Moline,1 Gert Helms,2 Thomas Friedl,2 Debashish Bhattacharya1 1 Department of Biological Sciences and the Roy J. Carver Center for Comparative Genomics, University of Iowa, 312 Biology Building, Iowa City, IA 52242-1324, USA 2 Albrecht-von-Haller-Institut fu¨ r Pflanzenwissenschaften, Abteilung Experimentelle Phykologie und Sammlung von Algenkulturen, Universita¨ tGo¨ ttingen, 37073 Go¨ ttingen, Germany Received: 14 May 2004 / Accepted: 7 November 2004 [Reviewing Editor: Dr. W. Ford Doolittle] Abstract. The wide but sporadic distribution of group Introduction I introns in protists, plants, and fungi, as well as in eubacteria, likely resulted from extensive lateral Group I introns are autocatalytic RNAs that encode transfer followed by differential loss. The extent of conserved primary and secondary structures essential horizontal transfer of group I introns can potentially for self-splicing (Kruger et al. 1982; Cech 1985). The be determined by examining closely related species or conserved RNA elements are readily aligned and can genera. We used a phylogenetic approach with a large be used for phylogenetic reconstruction to uncover data set (including 62 novel large subunit [LSU] the evolutionary history of these sequences (e.g., rRNA group I introns) to study intron movement Bhattacharya et al. 1994; Hibbett et al. 1996; Haugen within the monophyletic lichen family Physciaceae. and Bhattacharya 2004; Haugen et al. 2004a, b, Our results show five cases of horizontal transfer into 2005). Group I introns are distributed in organellar homologous sites between species but do not support and ribosomal (r)DNA in protists, plants, and fungi, transposition into ectopic sites. -
Aspects of Photobiont Selectivity in Lichens
Aspects of photobiont selectivity in lichens Mag. Sabine Wornik Doctoral Dissertation Institute of Plant Sciences Karl-Franzens-University Graz, Austria Graz, May 2009 Acknowledgements I would like to thank all people that made this thesis possible: Firstly, I would like to thank my supervisor Martin Grube for his guidance and support during the thesis and for the topic. The head of the department Helmut Mayrhofer for the possibility to work at the Institute of Plant Sciences. The Austrian Science Foundation is thanked for financial support (FWF-17601 B06). Furthermore I would like to thank Serena Ruisi (Orvieto) and Ronald Thenius (Graz) for helping me during the sampling in Italy. Åsa Dahlkild (Stockholm), Jarle W. Bjerke (Tromsø), Lucia Muggia (Graz) and Martin Kukwa (Gdansk) for providing samples. Gert Helms (Göttingen), Elisabeth Baloch (London), Julia Blaha (Wies), Beata Guzow-Krzemińska (Gdansk), Magdalena Opanowicz (Norwich) and Rodrigo Reis (Curitiba) for data and suggestions. All the colleagues and friends at the Institute of Plant Sciences, especially in the lab, for valuable discussion and help, especially to Barbara Fetz, who was a great help in the lab. And last but not least, I would like to thank my family, especially my mum, and all my friends for their friendship and motivation throughout the genesis of this thesis. 1. INTRODUCTION.................................................................................... 4 1.1. The Lichen Symbiosis............................................................................................................. -
Molecular Phylogenetics and Evolution 63 (2012) 374–387
Molecular Phylogenetics and Evolution 63 (2012) 374–387 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota) Ester Gaya a, Filip Högnabba b, Ángela Holguin c, Katalin Molnar d, Samantha Fernández-Brime e, Soili Stenroos b, Ulf Arup f, Ulrik Søchting g, Pieter Van den Boom h, Robert Lücking i, Harrie J.M. Sipman j, ⇑ François Lutzoni a, a Department of Biology, Duke University, Durham, NC 27708-0338, USA b Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland c Department of Biology, Universidad de Los Andes, Carrera 1, 18A-12 Bogotá, Colombia d Institute of Ecology and Botany, Hungarian Academy of Sciences, 2163 Vácrátót, Alkotmány u. 2-4, Hungary e Department of Plant Biology (Botany Unit), Facultat de Biologia, Universitat de Barcelona, Av. Diagonal 645, 08028 Barcelona, Spain f Botanical Museum, Lund University, Östra Vallgatan 18, SE-223 61 Lund, Sweden g Section on Ecology and Evolution, Department of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen Ø, Denmark h Arafura 16, NL-5691 JA Son, The Netherlands i Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, IL 60605-2496, USA j Botanischer Garten und Botanisches Museum Berlin-Dahlem, Königin-Luise-Strasse 6-8, D-14195 Berlin, Germany article info abstract Article history: The resolution of the phylogenetic relationships within the order Teloschistales (Ascomycota, lichen- Received 5 September 2011 forming-fungi), with nearly 2000 known species and outstanding phenotypic diversity, has been hin- Revised 5 January 2012 dered by the limitation in the resolving power that single-locus or two-locus phylogenetic studies have Accepted 13 January 2012 provided to date. -
Fungicolous Fungi: Terminology, Diversity, Distribution, Evolution, and Species Checklist
Fungal Diversity https://doi.org/10.1007/s13225-019-00422-9 (0123456789().,-volV)(0123456789().,- volV) REVIEW Fungicolous fungi: terminology, diversity, distribution, evolution, and species checklist 1,2 1,7 3 4 5 Jing-Zu Sun • Xing-Zhong Liu • Eric H. C. McKenzie • Rajesh Jeewon • Jian-Kui (Jack) Liu • 1 6 2 Xiao-Ling Zhang • Qi Zhao • Kevin D. Hyde Received: 20 September 2018 / Accepted: 4 March 2019 Ó School of Science 2019 Abstract Fungicolous fungi are a very large, diverse, ecological and trophic group of organisms that are associated with other fungi. This association occurs with species of different lineages across the fungal kingdom. They are recognized as symbionts, mycoparasites, saprotrophs, and even neutrals. Wherever fungi have been found, fungicolous taxa have also been found. Homogeneous environments favour the development of highly adapted and coevolved fungicolous species, which could have led to host-specificity aspects. As a primary consumer, fungicolous fungi decrease the turnaround time of certain nutrients in food webs, due to their special often-rapid life cycles. They may also significantly affect population dynamics and population sizes of their hosts in aquatic or terrestrial ecosystems. As mycoparasites of pathogenic fungi, some fungicolous fungi have been explored as biocontrol agents. They may also cause serious diseases of cultivated edible and medicinal mushrooms, decreasing both yield and quality. Fungicolous fungi could be used as model organisms that may help determine better understanding of species interactions, fungal evolution and divergence, and fungicolous mechanisms. This review summarizes our current understanding of fungicolous fungi, with a particular focus on the terminology, diversity, global distribution, and interaction with their hosts.