DOCSLIB.ORG

Tesis Salvador Chiva 160120 Portada

Total Page：16

File Type：pdf, Size：1020Kb

Download full-text PDF Read full-text
Tesis Salvador Chiva 160120 Portada TESIS DOCTORAL PATRONES DE SELECCIÓN DE MICROALGAS EN COMUNIDADES DE LÍQUENES TERRÍCOLAS EN BIOCOSTRAS Salvador Chiva Natividad Departamento de Botánica y Geología TESIS DOCTORAL PATRONES DE SELECCIÓN DE MICROALGAS EN COMUNIDADES DE LÍQUENES TERRÍCOLAS EN BIOCOSTRAS JOSÉ SALVADOR CHIVA NATIVIDAD Directora/Tutora: Eva Barreno Rodríguez Directora: Patricia Moya Gay Directora: Arantzazu Molins Piqueres Programa de Doctorado en Biodiversidad y Biología Evolutiva Valencia, enero 2020 Departamento de Botánica y Geología Tesis presentada por José Salvador Chiva Natividad para optar al grado de Doctor en Ciencias Biológicas por la Universitat de València, con el título: Patrones de selección de microalgas en comunidades de líquenes terrícolas en biocostras Firmado: José Salvador Chiva Natividad La Dra. Eva Barreno Rodríguez, Catedrática del Departamento de Botánica y Geología de la Facultad de Ciencias Biológicas de la Universitat de València; la Dra. Patricia Moya Gay y la Dra. Arantzazu Molins Piqueres. Certifican que el licenciado en Biología José Salvador Chiva Natividad ha realizado bajo su dirección el trabajo Patrones de selección de microalgas en comunidades de líquenes terrícolas en biocostras, y autorizan su presentación para optar al título de Doctor de la Universitat de València. Y para que así conste, en cumplimiento de la legislación vigente, fi rmamos el presente certifi cado en Burjassot, en octubre de 2019. Fdo.: Eva Barreno Rodríguez Fdo.: Patricia Moya Gay Fdo.: Arantzazu Molins Piqueres Directora/ Tutora de la Tesis Directora de la Tesis Directora de la Tesis Departamento de Botánica y Geología La Dra. Eva Barreno Rodríguez, Catedrática del Departamento de Botánica y Geología de la Facultad de Ciencias Biológicas de la Universitat de València; la Dra. Patricia Moya Gay y la Dra. Arantzazu Molins Piqueres. Certifican que las revistas donde se han publicado los artículos que se integran en la Tesis Doctoral de José Salvador Chiva Natividad, titulada: Patrones de selección de microalgas en comunidades de líquenes terrícolas en biocostras, se encuentran indexadas. A continuación, se especifi ca para cada revista el índice de impacto, el cuartil y la posición en el área que corresponde con el año de publicación. Índice de Revista / Año impacto Cuartil Posición en el área IJSEM 2015 2.493 Q3 65/123 Microbiology Fottea 2018 1.727 Q2 100/228 Plant Sciences Journal of Biogeography 2018 3.884 Q1 34/164 Ecology Fdo.: Eva Barreno Rodríguez Fdo.: Patricia Moya Gay Fdo.: Arantzazu Molins Piqueres Directora/ Tutora de la Tesis Directora de la Tesis Directora de la Tesis Departamento de Botánica y Geología Publicaciones científicas de la presente Tesis Doctoral Como resultado de esta Tesis Doctoral se han publicado los siguientes artículos de investigación: • Moya P, Škaloud P, Chiva S, García-Breijo FJ, Reig- Arminana J, Vancurova L & Barreno E (2015). Molecular phylogeny and ultrastructure of the lichen microalga Asterochloris mediterranea sp. nov. from Mediterranean and Canary Islands ecosystems. International Journal of Systematic and Evolutionary Microbiology, 65, 1838-1854. • Moya P, Chiva S, Molins A, Jadrná I, Škaloud P, Peksa O, & Barreno E (2018). Myrmecia israeliensis as the primary symbiotic microalga in squamulose lichens growing in European and Canary Island terricolous communities. Fottea, 18, 72-85. • Chiva S, Garrido-Benavent I, Moya P, Molins A & Barreno E (2019). How did terricolous fungi originate in the Mediterranean region? A case study with a gypsicolous lichenized species. Journal of Biogeography, 46, 515-525. Manuscrito original para enviar: • Moya P, Molins A, Chiva S, Bastida J & Barreno E. Symbiont interaction patterns in biocrust lichen communities located in semi-arid gypsum outcrops in the Central Iberian Peninsula. Microbial ecology - Soil microbiology. Departamento de Botánica y Geología La Dra. Eva Barreno Rodríguez, Catedrática del Departamento de Botánica y Geología de la Facultad de Ciencias Biológicas de la Universitat de València; la Dra. Patricia Moya Gay y la Dra. Arantzazu Molins Piqueres. INFORMAN con el objetivo de cumplir con la legislación vigente en la Universitat de València, por lo que respecta a la presentación de Tesis Doctorales por compilación de artículos, que la Tesis Doctoral de José Salvador Chiva Natividad, titulada: Patrones de selección de microalgas en comunidades de líquenes terrícolas en biocostras, incluye tres artículos publicados en las revistas indicadas en el documento que corresponde. Destacamos que el doctorando es el primer autor de la publicación de la revista con mayor índice de impacto. En las otras dos publicaciones no es el primer autor, para la justificación de la autoría se redactó un informe donde lasdirectoras indicaron las funciones del doctorando en cada uno de los artículos (a continuación). Dicho informe fue aceptado por la Comisión de Doctorado permitiendo la exposición de esta Tesis. Así mismo, es necesario indicar que el resto fidermantes de dichos artículos son Doctores, por lo cual, el trabajo no ha estado, ni estará, formando parte de otra Tesis doctoral. Y para que así conste, en cumplimiento de la legislación vigente, firmamos el presente informe en Burjassot, en octubre de 2019. Fdo.: Eva Barreno Rodríguez Fdo.: Patricia Moya Gay Fdo.: Arantzazu Molins Piqueres Directora/ Tutora de la Tesis Directora de la Tesis Directora de la Tesis Valencia, 21 de septiembre de 2018 Eva BARRENO RODRÍGUEZ, catedrática de Botánica de la Universitat de Valencia, me dirijo a ustedes como directora del grupo de investigación del Instituto Cavanilles de Biodiversidad y Biología Evolutiva: "Biodiversidad Vegetal: Ecofisiología". SOLICITO, de la comisión de doctorado, en mi nombre y en el de las otras dos directoras, el permiso para la presentación de la Tesis doctoral de José Salvador Chiva Natividad con título provisional: "Especificidad y variabilidad de los ficobiontes identificados en líquenes de comunidades gipsícolas" por compendio de publicaciones. A continuación, se justifica por parte de la directora de la tesis Eva Barreno Rodríguez y las codirectoras Patricia Moya Gay y Arántzazu Molins Piqueres la posición del doctorando en la autoría de dos publicaciones incluidas en dicha tesis y su implicación en .cada uno de ellos: 1-Moya, P., Skaloud, P., Chiva, S., García-Breijo, F. J., Reig-Anninana, J., VanCurová, L., & Barreno, E. (2015). Molecular phylogeny and ultrastructure of the lichen microalga Asterochloris mediterranea sp. nov. fromMediterranean and Canary Islands ecosystems. Internationaljournal of Systematic and evolutionary Microbiology, 65(6), 1838-1854. 2- Moya, P., Chiva, S., Molins, A., Jadmá, l., Skaloud, P., & Eva Barreno, O. P. (2018). Myrmecia israeliensis as the primary symbiotic microalga in squamulose lichens growing in European and Canary Island terricolous communities. FOTTEA, 18(1), 72-85. En diciembre del 2012 Salvador Chiva presentó el trabajo de final de máster titulado "Especificidad y variabilidad de los ficobiontes identificados en líquenes de comunidades gipsícolas", debido a los novedosos resultados obtenidos se consideró interesante la realización de una tesis doctoral basada en dicho TFM, así pues, el estudiante se inscribió en el Programa de doctorado "Biodiversidad y biología evolutiva" en el curso 2014-2015. 1. La redacción del primer artículo mencionado y que suponía la descripción de una nueva especie del género Asteroch/oris, se realizó en colaboración con el mejor experto en este género que, debido a sus conocimientos en técnicas que se emplean en la publicación, se decidió colocar como segundo firmante (Pavel s). Para dicho artículo se utilizaron y ampliaron datos obtenidos por Salvador Chiva en su TFM. A continuación, se especifican los métodos y análisis del estudio que llevó a cabo únicamente el estudiante de doctorado: Taxa sampling/Transmission electron microscopic/ Scanning electron microscopy /DNA isolation, amplification and sequencing/ Haplotype network. Morphological and ultrastructural characterization/Phycobiont phylogenetic analyses/ Mycobiont phylogenetic analyses. Sin embargo, fue la primera firmante y codirectora de esta tesis quien coordinó la redacción final y publicación del artículo (necesaria para la justificación de la financiación recibida), mientras el estudiante, que todavía estaba en su primer año de doctorado (2015) se encargaba de finalizar los muestreos, de las extracciones de ADN, del análisis de las secuencias y de la recopilación de datos para siguientes publicaciones. Dichos muestreos y procesados de datos, realizados exclusivamente por Salvador Chiva, han sido cruciales para la posterior redacción de varias publicaciones y de su tesis doctoral. Por todo ello, se consideró adecuado la posición en tercer lugar del estudiante en este trabajo, aunque su implicación fue clave para la publicación del mismo. 2. De nuevo, mediante otra colaboración con el grupo de la Universidad de Praga, y utilizando los datos generados en el TFM de Salvador Chiva, se finalizó la redacción del segundo artículo. Dicho estudio, que fue de mayor complejidad, ha supuesto la confirmación de un género nuevo de microalga simbionte que es la que predomina en un amplio grupo de líquenes escuamulosos y con hábitat terrícola. A continuación, se especifican los métodos y análisis del estudio que llevó a cabo únicamente Salvador Chiva: Lichen material/Sample preparation/DNA extraction, amplification and sequencing/ Phycobiont and mycobiont phylogenetic analyses/ Microscopic investigations "in thallus" Phycobiont
Load more

Recommended publications
  • Checklist of Calicioid Lichens and Fungi for Genera with Members in Temperate Western North America Draft: 2012-03-13
    Draft: 2012-03-13 Checklist of Calicioids – E. B. Peterson Checklist of Calicioid Lichens and Fungi For Genera with Members in Temperate Western North America Draft: 2012-03-13 by E. B. Peterson Calicium abietinum, EBP#4640 1 Draft: 2012-03-13 Checklist of Calicioids – E. B. Peterson Genera Acroscyphus Lév. Brucea Rikkinen Calicium Pers. Chaenotheca Th. Fr. Chaenothecopsis Vainio Coniocybe Ach. = Chaenotheca "Cryptocalicium" – potentially undescribed genus; taxonomic placement is not known but there are resemblances both to Mycocaliciales and Onygenales Cybebe Tibell = Chaenotheca Cyphelium Ach. Microcalicium Vainio Mycocalicium Vainio Phaeocalicium A.F.W. Schmidt Sclerophora Chevall. Sphinctrina Fr. Stenocybe (Nyl.) Körber Texosporium Nádv. ex Tibell & Hofsten Thelomma A. Massal. Tholurna Norman Additional genera are primarily tropical, such as Pyrgillus, Tylophoron About the Species lists Names in bold are believed to be currently valid names. Old synonyms are indented and listed with the current name following (additional synonyms can be found in Esslinger (2011). Names in quotes are nicknames for undescribed species. Names given within tildes (~) are published, but may not be validly published. Underlined species are included in the checklist for North America north of Mexico (Esslinger 2011). Names are given with authorities and original citation date where possible, followed by a colon. Additional citations are given after the colon, followed by a series of abbreviations for states and regions where known. States and provinces use the standard two-letter abbreviation. Regions include: NAm = North America; WNA = western North America (west of the continental divide); Klam = Klamath Region (my home territory). For those not known from North America, continental distribution may be given: SAm = South America; EUR = Europe; ASIA = Asia; Afr = Africa; Aus = Australia.
    [Show full text]
  • New Or Interesting Lichens and Lichenicolous Fungi from Belgium, Luxembourg and Northern France
    New or interesting lichens and lichenicolous fungi from Belgium, Luxembourg and northern France. X Emmanuël SÉRUSIAUX1, Paul DIEDERICH2, Damien ERTZ3, Maarten BRAND4 & Pieter VAN DEN BOOM5 1 Plant Taxonomy and Conservation Biology Unit, University of Liège, Sart Tilman B22, B-4000 Liège, Belgique ([email protected]) 2 Musée national d’histoire naturelle, 25 rue Munster, L-2160 Luxembourg, Luxembourg ([email protected]) 3 Jardin Botanique National de Belgique, Domaine de Bouchout, B-1860 Meise, Belgium ([email protected]) 4 Klipperwerf 5, NL-2317 DX Leiden, the Netherlands ([email protected]) 5 Arafura 16, NL-5691 JA Son, the Netherlands ([email protected]) Sérusiaux, E., P. Diederich, D. Ertz, M. Brand & P. van den Boom, 2006. New or interesting lichens and lichenicolous fungi from Belgium, Luxembourg and northern France. X. Bul- letin de la Société des naturalistes luxembourgeois 107 : 63-74. Abstract. Review of recent literature and studies on large and mainly recent collections of lichens and lichenicolous fungi led to the addition of 35 taxa to the flora of Belgium, Lux- embourg and northern France: Abrothallus buellianus, Absconditella delutula, Acarospora glaucocarpa var. conspersa, Anema nummularium, Anisomeridium ranunculosporum, Artho- nia epiphyscia, A. punctella, Bacidia adastra, Brodoa atrofusca, Caloplaca britannica, Cer- cidospora macrospora, Chaenotheca laevigata, Collemopsidium foveolatum, C. sublitorale, Coppinsia minutissima, Cyphelium inquinans, Involucropyrenium squamulosum, Lecania fructigena, Lecanora conferta, L. pannonica, L. xanthostoma, Lecidea variegatula, Mica- rea micrococca, Micarea subviridescens, M. vulpinaris, Opegrapha prosodea, Parmotrema stuppeum, Placynthium stenophyllum var. isidiatum, Porpidia striata, Pyrenidium actinellum, Thelopsis rubella, Toninia physaroides, Tremella coppinsii, Tubeufia heterodermiae, Verru- caria acrotella and Vezdaea stipitata.
    [Show full text]
  • Leightoniella Zeylanensis Belongs to the Pannariaceae
    doi: 10.1111/njb.01880 00 1–6 NORDIC JOURNAL OF BOTANY Research Leightoniella zeylanensis belongs to the Pannariaceae Gothamie Weerakoon, André Aptroot, Mats Wedin and Stefan Ekman G. Weerakoon (https://orcid.org/0000-0002-9550-2139), Algae, Fungi and Plant Division, Dept of Life Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom. – A. Aptroot (https://orcid.org/0000-0001-7949-2594), ABL Herbarium, XK Soest, the Netherlands. – M. Wedin (https://orcid.org/0000-0002-8295-5198), Swedish Museum of Natural History, Dept of Botany, Stockholm, Sweden. – S. Ekman (https://orcid. org/0000-0003-3021-1821) ([email protected]), Museum of Evolution, Uppsala Univ., Uppsala, Sweden. Nordic Journal of Botany Recent finds ofLeightoniella zeylanensis, classified variously in the Collemataceae and 2018: e01880 Pannariaceae, enabled us to generate DNA sequence data for investigating its phy- doi: 10.1111/njb.01880 logenetic affiliation. Newly generated sequence data from the internal transcribed spacer (ITS) region and the large subunit of the nuclear ribosomal DNA (nrLSU), Subject Editor and the small subunit of the mitochondrial ribosomal (mrSSU) DNA, and the largest sub- Editor-in-Chief: Torbjörn Tyler unit of the RNA polymerase II gene (RPB1) indicate that L. zeylanensis is a member Accepted 1 June 2018 of the Pannariaceae, belonging to a strongly supported clade together with Physma, Lepidocollema, and Gibbosporina (= the ‘Physma clade’). With the currently available data, however, relationships within this clade are largely impossible to reconstruct with confidence. Leightoniella zeylanensis was found to possess ellipsoid ascospores surrounded by a thick, gelatinous perispore with pointed ends, supporting a previously published hypothesis that such a perispore type is a synapomorphy for the Physma clade.
    [Show full text]
  • Opuscula Philolichenum, 6: 1-XXXX
    Opuscula Philolichenum, 15: 56-81. 2016. *pdf effectively published online 25July2016 via (http://sweetgum.nybg.org/philolichenum/) Lichens, lichenicolous fungi, and allied fungi of Pipestone National Monument, Minnesota, U.S.A., revisited M.K. ADVAITA, CALEB A. MORSE1,2 AND DOUGLAS LADD3 ABSTRACT. – A total of 154 lichens, four lichenicolous fungi, and one allied fungus were collected by the authors from 2004 to 2015 from Pipestone National Monument (PNM), in Pipestone County, on the Prairie Coteau of southwestern Minnesota. Twelve additional species collected by previous researchers, but not found by the authors, bring the total number of taxa known for PNM to 171. This represents a substantial increase over previous reports for PNM, likely due to increased intensity of field work, and also to the marked expansion of corticolous and anthropogenic substrates since the site was first surveyed in 1899. Reexamination of 116 vouchers deposited in MIN and the PNM herbarium led to the exclusion of 48 species previously reported from the site. Crustose lichens are the most common growth form, comprising 65% of the lichen diversity. Sioux Quartzite provided substrate for 43% of the lichen taxa collected. Saxicolous lichen communities were characterized by sampling four transects on cliff faces and low outcrops. An annotated checklist of the lichens of the site is provided, as well as a list of excluded taxa. We report 24 species (including 22 lichens and two lichenicolous fungi) new for Minnesota: Acarospora boulderensis, A. contigua, A. erythrophora, A. strigata, Agonimia opuntiella, Arthonia clemens, A. muscigena, Aspicilia americana, Bacidina delicata, Buellia tyrolensis, Caloplaca flavocitrina, C. lobulata, C.
    [Show full text]
  • Pannariaceae Generic Taxonomy LL Ver. 27.9.2013.Docx
    http://www.diva-portal.org Preprint This is the submitted version of a paper published in The Lichenologist. Citation for the original published paper (version of record): Ekman, S. (2014) Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota). The Lichenologist, 46: 627-656 http://dx.doi.org/10.1017/S002428291400019X Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-943 Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM & Per M. JØRGENSEN S. Ekman (corresponding author): Museum of Evolution, Uppsala University, Norbyvägen 16, SE –75236 Uppsala, Sweden. Email: [email protected] M. Wedin: Dept. of Botany, Swedish Museum of Natural History, Box 50007, SE –10405 Stockholm, Sweden. L. Lindblom and P. M. Jørgensen: Dept. of Natural History, University Museum of Bergen, Box 7800, NO –5020 Bergen, Norway. Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specifically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorporating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as morphological and chemical data available.
    [Show full text]
  • 1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
    Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S.
    [Show full text]
  • BLS Bulletin 111 Winter 2012.Pdf
    1 BRITISH LICHEN SOCIETY OFFICERS AND CONTACTS 2012 PRESIDENT B.P. Hilton, Beauregard, 5 Alscott Gardens, Alverdiscott, Barnstaple, Devon EX31 3QJ; e-mail [email protected] VICE-PRESIDENT J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SECRETARY C. Ellis, Royal Botanic Garden, 20A Inverleith Row, Edinburgh EH3 5LR; email [email protected] TREASURER J.F. Skinner, 28 Parkanaur Avenue, Southend-on-Sea, Essex SS1 3HY, email [email protected] ASSISTANT TREASURER AND MEMBERSHIP SECRETARY H. Döring, Mycology Section, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] REGIONAL TREASURER (Americas) J.W. Hinds, 254 Forest Avenue, Orono, Maine 04473-3202, USA; email [email protected]. CHAIR OF THE DATA COMMITTEE D.J. Hill, Yew Tree Cottage, Yew Tree Lane, Compton Martin, Bristol BS40 6JS, email [email protected] MAPPING RECORDER AND ARCHIVIST M.R.D. Seaward, Department of Archaeological, Geographical & Environmental Sciences, University of Bradford, West Yorkshire BD7 1DP, email [email protected] DATA MANAGER J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SENIOR EDITOR (LICHENOLOGIST) P.D. Crittenden, School of Life Science, The University, Nottingham NG7 2RD, email [email protected] BULLETIN EDITOR P.F. Cannon, CABI and Royal Botanic Gardens Kew; postal address Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] CHAIR OF CONSERVATION COMMITTEE & CONSERVATION OFFICER B.W. Edwards, DERC, Library Headquarters, Colliton Park, Dorchester, Dorset DT1 1XJ, email [email protected] CHAIR OF THE EDUCATION AND PROMOTION COMMITTEE: S.
    [Show full text]
  • Lichens and Associated Fungi from Glacier Bay National Park, Alaska
    The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O.
    [Show full text]
  • Download Full Article in PDF Format
    Cryptogamie, Mycologie, 2008, 29 (1): 35-61 © 2008 Adac. Tous droits réservés Découverte de cinq espèces rares de macrolichens dans les Pyrénées occidentales françaises : une présence relictuelle ? Didier MASSON 386 rue des Flamboyants, F-40600 Biscarrosse, France [email protected] Résumé – Cinq espèces de lichens foliacés viennent d’être découvertes dans le département des Pyrénées-Atlantiques (France) : Anaptychia palmulata (Michx.) Vain., Leptogium laceroides B. de Lesd., Phaeophyscia adiastola (Essl.) Essl., Phaeophyscia rubropulchra (Degel.) Essl. et Pyxine sorediata (Ach.) Mont. Le statut relictuel préglaciaire de ces macrolichens, rares et liés aux forêts caducifoliées, est étayé par plusieurs éléments. Chaque taxon est décrit et comparé avec les espèces voisines, son écologie locale est détaillée et sa distribution européenne est précisée. Anaptychia palmulata et P. adiastola sont mentionnés pour la première fois en Europe ; P. rubropulchra en France, en Italie et en Turquie ; L. laceroides et P. sorediata à l’île de la Réunion (océan Indien occidental). Anaptychia / Leptogium / Phaeophyscia / Pyxine / épiphytes / forêts tempérées caducifoliées / biogéographie / espèces relictes / reliques tertiaires Abstract – Five foliose lichens species have just been discovered in the department of Pyrénées-Atlantiques (France): Anaptychia palmulata (Michx.) Vain., Leptogium laceroides B. de Lesd., Phaeophyscia adiastola (Essl.) Essl., Phaeophyscia rubropulchra (Degel.) Essl. and Pyxine sorediata (Ach.) Mont. The preglacial relictual status of these macrolichens, which are rare and associated with deciduous forests, is supported by several arguments. Each taxon is described and compared with the related species, its local ecology is detailed and its European distribution is given. Anaptychia palmulata and P. adiastola are new to Europe; P. rubropulchra to France, Italy and Turkey; L.
    [Show full text]
  • Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
    Fungal Diversity DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. Alternative fossil assignments resulted in very different time es- Caliciaceae is one of several ascomycete groups characterized timates and the comparison with the analysis based on a second- by producing prototunicate (thin-walled and evanescent) asci ary calibration demonstrates that the most likely placement of the and a mazaedium (an accumulation of loose, maturing spores fossil is close to a terminal node rather than a basal placement in covering the ascoma surface).
    [Show full text]
  • Lichens and Allied Fungi of the Indiana Forest Alliance
    2017. Proceedings of the Indiana Academy of Science 126(2):129–152 LICHENS AND ALLIED FUNGI OF THE INDIANA FOREST ALLIANCE ECOBLITZ AREA, BROWN AND MONROE COUNTIES, INDIANA INCORPORATED INTO A REVISED CHECKLIST FOR THE STATE OF INDIANA James C. Lendemer: Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126 USA ABSTRACT. Based upon voucher collections, 108 lichen species are reported from the Indiana Forest Alliance Ecoblitz area, a 900 acre unit in Morgan-Monroe and Yellowwood State Forests, Brown and Monroe Counties, Indiana. The lichen biota of the study area was characterized as: i) dominated by species with green coccoid photobionts (80% of taxa); ii) comprised of 49% species that reproduce primarily with lichenized diaspores vs. 44% that reproduce primarily through sexual ascospores; iii) comprised of 65% crustose taxa, 29% foliose taxa, and 6% fruticose taxa; iv) one wherein many species are rare (e.g., 55% of species were collected fewer than three times) and fruticose lichens other than Cladonia were entirely absent; and v) one wherein cyanolichens were poorly represented, comprising only three species. Taxonomic diversity ranged from 21 to 56 species per site, with the lowest diversity sites concentrated in riparian corridors and the highest diversity sites on ridges. Low Gap Nature Preserve, located within the study area, was found to have comparable species richness to areas outside the nature preserve, although many species rare in the study area were found only outside preserve boundaries. Sets of rare species are delimited and discussed, as are observations as to the overall low abundance of lichens on corticolous substrates and the presence of many unhealthy foliose lichens on mature tree boles.
    [Show full text]
  • Calicium Denigratum (Vain.) Tibell, a New Lichen Record for North America
    North American Fungi Volume 7, Number 11, Pages 1-5 Published October 26, 2012 Calicium denigratum (Vain.) Tibell, a new lichen record for North America Richard Troy McMullin1,, Steven B. Selva2, Jose R. Maloles1, and Steven G. Newmaster1 1Biodiversity Institute of Ontario Herbarium, Integrative Biology, University of Guelph, Guelph, Ontario, N1G 2W1 2University of Maine at Fort Kent, 23 University Drive, Fort Kent, Maine 04743 McMullin, R. T., S. B. Selva, J. R. Maloles, and S. G. Newmaster. 2012. Calicium denigratum (Vain.) Tibell, a new lichen record for North America. North American Fungi 7(11): 1-5. doi: http://dx.doi: 10.2509/naf2012.007.011 Corresponding author: R. Troy McMullin, [email protected]. Accepted for publication October 23, 2012. http://pnwfungi.org Copyright © 2012 Pacific Northwest Fungi Project. All rights reserved. Abstract: Calicium denigratum was previously known from Europe and Siberia. It is reported here for the first time in North America from open canopy woodlands in northeastern Ontario and northeastern New Brunswick. Distinctions between the two species that are most similar, C. abietinum and C. glaucellum, are also presented. Key words: Calicium denigratum, Calicium abietinum, Calicium glaucellum, North America. 2 McMullin et al. Calicium denigratum in North America. North American Fungi 7(11): 1-5 Introduction and Methods: Calicium was 101-140 yrs old, the canopy closure was 44%, denigratum (Vain.) Tibell (syn. Calicium curtum the live tree stem density was 320 stems/ha, the var. denigratum Vain.) was first moved to the snag stem density was 69 stems/hectare, and the species level by Tibell (1976). This uncommon tree composition was Picea mariana 68% and lichen occurs in open canopy woodlands in Pinus banksiana 32%.
    [Show full text]