Squirrels of Sulawesi: an Introduction
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Gliding Dragons and Flying Squirrels: Diversifying Versus Stabilizing Selection on Morphology Following the Evolution of an Innovation
vol. 195, no. 2 the american naturalist february 2020 E-Article Gliding Dragons and Flying Squirrels: Diversifying versus Stabilizing Selection on Morphology following the Evolution of an Innovation Terry J. Ord,1,* Joan Garcia-Porta,1,† Marina Querejeta,2,‡ and David C. Collar3 1. Evolution and Ecology Research Centre and the School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, New South Wales 2052, Australia; 2. Institute of Evolutionary Biology (CSIC–Universitat Pompeu Fabra), Passeig Marítim de la Barceloneta, 37–49, Barcelona 08003, Spain; 3. Department of Organismal and Environmental Biology, Christopher Newport University, Newport News, Virginia 23606 Submitted August 1, 2018; Accepted July 16, 2019; Electronically published December 17, 2019 Online enhancements: supplemental material. Dryad data: https://doi.org/10.5061/dryad.t7g227h. fi abstract: Evolutionary innovations and ecological competition are eral de nitions of what represents an innovation have been factors often cited as drivers of adaptive diversification. Yet many offered (reviewed by Rabosky 2017), this classical descrip- innovations result in stabilizing rather than diversifying selection on tion arguably remains the most useful (Galis 2001; Stroud morphology, and morphological disparity among coexisting species and Losos 2016; Rabosky 2017). Hypothesized innovations can reflect competitive exclusion (species sorting) rather than sympat- have drawn considerable attention among ecologists and ric adaptive divergence (character displacement). We studied the in- evolutionary biologists because they can expand the range novation of gliding in dragons (Agamidae) and squirrels (Sciuridae) of ecological niches occupied within communities. In do- and its effect on subsequent body size diversification. We found that gliding either had no impact (squirrels) or resulted in strong stabilizing ing so, innovations are thought to be important engines of selection on body size (dragons). -
Checklist of the Mammals of Indonesia
CHECKLIST OF THE MAMMALS OF INDONESIA Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation i ii CHECKLIST OF THE MAMMALS OF INDONESIA Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation By Ibnu Maryanto Maharadatunkamsi Anang Setiawan Achmadi Sigit Wiantoro Eko Sulistyadi Masaaki Yoneda Agustinus Suyanto Jito Sugardjito RESEARCH CENTER FOR BIOLOGY INDONESIAN INSTITUTE OF SCIENCES (LIPI) iii © 2019 RESEARCH CENTER FOR BIOLOGY, INDONESIAN INSTITUTE OF SCIENCES (LIPI) Cataloging in Publication Data. CHECKLIST OF THE MAMMALS OF INDONESIA: Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation/ Ibnu Maryanto, Maharadatunkamsi, Anang Setiawan Achmadi, Sigit Wiantoro, Eko Sulistyadi, Masaaki Yoneda, Agustinus Suyanto, & Jito Sugardjito. ix+ 66 pp; 21 x 29,7 cm ISBN: 978-979-579-108-9 1. Checklist of mammals 2. Indonesia Cover Desain : Eko Harsono Photo : I. Maryanto Third Edition : December 2019 Published by: RESEARCH CENTER FOR BIOLOGY, INDONESIAN INSTITUTE OF SCIENCES (LIPI). Jl Raya Jakarta-Bogor, Km 46, Cibinong, Bogor, Jawa Barat 16911 Telp: 021-87907604/87907636; Fax: 021-87907612 Email: [email protected] . iv PREFACE TO THIRD EDITION This book is a third edition of checklist of the Mammals of Indonesia. The new edition provides remarkable information in several ways compare to the first and second editions, the remarks column contain the abbreviation of the specific island distributions, synonym and specific location. Thus, in this edition we are also corrected the distribution of some species including some new additional species in accordance with the discovery of new species in Indonesia. -
3.Pdf Open Access
Veterinary World, EISSN: 2231-0916 RESEARCH ARTICLE Available at www.veterinaryworld.org/Vol.13/November-2020/3.pdf Open Access Genetic characterization and phylogenetic study of Indonesian cuscuses from Maluku and Papua Island based on 16S rRNA gene Rini Widayanti1 , Richo Apriladi Bagas Pradana1 , Rony Marsyal Kunda2 and Suhendra Pakpahan3 1. Department of Biochemistry and Molecular Biology, Faculty of Veterinary Medicine, Universitas Gadjah Mada, Yogyakarta, Indonesia; 2. Biology Study Program, Faculty of Mathematics and Natural Sciences, Universitas Pattimura, Ambon, Indonesia; 3. Research Center for Biology, Indonesian Institute of Sciences (LIPI), Cibinong, West Java, Indonesia. Corresponding author: Suhendra Pakpahan, e-mail: [email protected] Co-authors: RW: [email protected], RABP: [email protected], RMK: [email protected] Received: 04-06-2020, Accepted: 22-09-2020, Published online: 04-11-2020 doi: www.doi.org/10.14202/vetworld.2020.2319-2325 How to cite this article: Widayanti R, Pradana RAB, Kunda RM, Pakpahan S (2020) Genetic characterization and phylogenetic study of Indonesian cuscuses from Maluku and Papua Island based on 16S rRNA gene, Veterinary World, 13(11): 2319-2325. Abstract Background and Aim: Indonesian cuscuses are now becoming scarce because of the reduction of habitat and poaching. Further, molecular characterization of Indonesian cuscuses is still very lacking. This study aimed to determine genetic markers and phylogenetic relationships of Indonesian cuscuses based on 16S rRNA gene sequences. Materials and Methods: This study used 21 cuscuses caught from two provinces and 16 islands: 13 from Maluku and eight from Papua. Cuscus samples were taken by biopsy following ethics guidelines for animals. -
A Species-Level Phylogenetic Supertree of Marsupials
J. Zool., Lond. (2004) 264, 11–31 C 2004 The Zoological Society of London Printed in the United Kingdom DOI:10.1017/S0952836904005539 A species-level phylogenetic supertree of marsupials Marcel Cardillo1,2*, Olaf R. P. Bininda-Emonds3, Elizabeth Boakes1,2 and Andy Purvis1 1 Department of Biological Sciences, Imperial College London, Silwood Park, Ascot SL5 7PY, U.K. 2 Institute of Zoology, Zoological Society of London, Regent’s Park, London NW1 4RY, U.K. 3 Lehrstuhl fur¨ Tierzucht, Technical University of Munich, Alte Akademie 12, 85354 Freising-Weihenstephan, Germany (Accepted 26 January 2004) Abstract Comparative studies require information on phylogenetic relationships, but complete species-level phylogenetic trees of large clades are difficult to produce. One solution is to combine algorithmically many small trees into a single, larger supertree. Here we present a virtually complete, species-level phylogeny of the marsupials (Mammalia: Metatheria), built by combining 158 phylogenetic estimates published since 1980, using matrix representation with parsimony. The supertree is well resolved overall (73.7%), although resolution varies across the tree, indicating variation both in the amount of phylogenetic information available for different taxa, and the degree of conflict among phylogenetic estimates. In particular, the supertree shows poor resolution within the American marsupial taxa, reflecting a relative lack of systematic effort compared to the Australasian taxa. There are also important differences in supertrees based on source phylogenies published before 1995 and those published more recently. The supertree can be viewed as a meta-analysis of marsupial phylogenetic studies, and should be useful as a framework for phylogenetically explicit comparative studies of marsupial evolution and ecology. -
Report on Biodiversity and Tropical Forests in Indonesia
Report on Biodiversity and Tropical Forests in Indonesia Submitted in accordance with Foreign Assistance Act Sections 118/119 February 20, 2004 Prepared for USAID/Indonesia Jl. Medan Merdeka Selatan No. 3-5 Jakarta 10110 Indonesia Prepared by Steve Rhee, M.E.Sc. Darrell Kitchener, Ph.D. Tim Brown, Ph.D. Reed Merrill, M.Sc. Russ Dilts, Ph.D. Stacey Tighe, Ph.D. Table of Contents Table of Contents............................................................................................................................. i List of Tables .................................................................................................................................. v List of Figures............................................................................................................................... vii Acronyms....................................................................................................................................... ix Executive Summary.................................................................................................................... xvii 1. Introduction............................................................................................................................1- 1 2. Legislative and Institutional Structure Affecting Biological Resources...............................2 - 1 2.1 Government of Indonesia................................................................................................2 - 2 2.1.1 Legislative Basis for Protection and Management of Biodiversity and -
FUNAMBULUS SPP., the STRIPED PALM SQUIRRELS 21.1 the Living Animal 21.1.1 Zoology the Striped Palm Squirrels Are Small Rodents W
CHAPTER TWENTY-ONE FUNAMBULUS SPP., THE STRIPED PALM SQUIRRELS 21.1 The Living Animal 21.1.1 Zoology The striped palm squirrels are small rodents with a head and body length of about 13–15 cm, and a tail which is slightly longer than the body (Plate 29). The two common species of South Asia are the three-striped or southern Indian palm squirrel (Funambulus palmarum) with three white stripes running along its dark brown back, and the fi ve-striped or northern Indian palm squirrel (F. pennanti) with two additional white stripes running on the fl anks, parallel to the three dorsal stripes.1 The most important difference between the two spe- cies is that the fi ve-striped squirrel is essentially commensal with man. It has become almost as dependent on man for food and shelter as house rats and mice, and lives in crowded towns, cities and villages where it shelters in houses, gardens, groves, hedges and in roadside trees. The three-striped squirrel, on the contrary, is a forest animal. It has a particularly shrill bird-like call which it repeats again and again, accompanied by quick jerks of its tail. Both species inhabit the Indian peninsula from the base of the Himalayas southwards, but the fi ve-striped squirrel is more common in northern India, particularly in the drier and more arid portions and extends into the dry plains of the South. The three-striped squirrel predominates in the South, and in the moister parts of western and eastern India. Both species may, however, occur in the same area. -
Diverse Nectar Robbers on Alpinia Roxburghii Sweet (Zingiberaceae)
Journal of Asia-Pacific Biodiversity 8 (2015) 238e241 HOSTED BY Contents lists available at ScienceDirect Journal of Asia-Pacific Biodiversity journal homepage: http://www.elsevier.com/locate/japb Short communication Diverse nectar robbers on Alpinia roxburghii Sweet (Zingiberaceae) Xiaobao Deng a, Wen Deng b, Alice Catherine Hughes c, Dharmalingam Mohandass a,* a Key Laboratory of Tropical Forest Ecology, Chinese Academy of Sciences, Menglun Town, Yunnan, PR China b Kunming Institute of Zoology, Chinese Academy of Sciences, Jiaochang Donglu, Kunming, Yunnan, PR China c Centre for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun Town, Yunnan, PR China article info abstract Article history: This study records for the first time three mammal species as nectar robbers on the ginger Alpinia Received 29 April 2015 roxburghii Sweet. We examined the behavior of nectar robbers and compared with earlier studies on a Received in revised form single plant species. We recorded seven species of nectar robbers: three squirrels, one bird, and three 29 July 2015 bees. Timing of robbing nectars were similar; however, robbing behavior differed among robbers. In Accepted 30 July 2015 particular, squirrels damaged the flower parts while robbing the nectar. Available online 18 August 2015 Copyright Ó 2015, National Science Museum of Korea (NSMK) and Korea National Arboretum (KNA). Production and hosting by Elsevier. This is an open access article under the CC BY-NC-ND license (http:// Keywords: animal behavior creativecommons.org/licenses/by-nc-nd/4.0/). ginger plant mammal-nectar robbers tropical seasonal rainforest Introduction studied in detail. Therefore, nectar robbers on ginger species could be a relevant topic to understand ecological consequences. -
Phylogeny, Biogeography and Systematic Revision of Plain Long-Nosed Squirrels (Genus Dremomys, Nannosciurinae) Q ⇑ Melissa T.R
Molecular Phylogenetics and Evolution 94 (2016) 752–764 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Phylogeny, biogeography and systematic revision of plain long-nosed squirrels (genus Dremomys, Nannosciurinae) q ⇑ Melissa T.R. Hawkins a,b,c,d, , Kristofer M. Helgen b, Jesus E. Maldonado a,b, Larry L. Rockwood e, Mirian T.N. Tsuchiya a,b,d, Jennifer A. Leonard c a Smithsonian Conservation Biology Institute, Center for Conservation and Evolutionary Genetics, National Zoological Park, Washington DC 20008, USA b Division of Mammals, National Museum of Natural History, Smithsonian Institution, P.O. Box 37012, Washington DC 20013-7012, USA c Estación Biológica de Doñana (EBD-CSIC), Conservation and Evolutionary Genetics Group, Avda. Americo Vespucio s/n, Sevilla 41092, Spain d George Mason University, Department of Environmental Science and Policy, 4400 University Drive, Fairfax, VA 20030, USA e George Mason University, Department of Biology, 4400 University Drive, Fairfax, VA 20030, USA article info abstract Article history: The plain long-nosed squirrels, genus Dremomys, are high elevation species in East and Southeast Asia. Received 25 March 2015 Here we present a complete molecular phylogeny for the genus based on nuclear and mitochondrial Revised 19 October 2015 DNA sequences. Concatenated mitochondrial and nuclear gene trees were constructed to determine Accepted 20 October 2015 the tree topology, and date the tree. All speciation events within the plain-long nosed squirrels (genus Available online 31 October 2015 Dremomys) were ancient (dated to the Pliocene or Miocene), and averaged older than many speciation events in the related Sunda squirrels, genus Sundasciurus. -
Trip Report 27Th September to 3Rd October 2014
Bali Trip Report 27th September to 3rd October 2014 Green Junglefowl by David Hoddinott RBT Bali 2014 Trip Report 2 Trip report compiled by Tour Leader: David Hoddinott Some of the top birds seen during this tour: 1. Sunda Thrush 7. Javan Kingfisher 2. Javan Banded Pitta 8. Oriental Plover 3. Javan Owlet 9. Sunda Scops Owl 4. Green Junglefowl 10. Cerulean Kingfisher 5. Bali Myna 11. Sunda Warbler 6. Yellow-throated Hanging Parrot 12. Crescent-chested Babbler Tour Summary Our comprehensive Bali tour was a resounding success! We recorded a fabulous 163 species including a good number of near-endemics and Bali’s only endemic (and one of the world’s rarest birds to boot), the magnificent Bali Myna! On our first afternoon we all met up at our comfortable ecolodge in the wooded outskirts of Denpasar. Some participants had just arrived in Bali from their international flights and the rest of us had recently flown in from Manado, after having completed a fabulous Sulawesi & Halmahera tour. Everyone had arrived in good time and after enjoying a delicious lunch we ventured out to the nearby Serangan Island to Oriental Plovers by David Hoddinott enjoy some bonus birding. The mudflats, mangroves and surrounding grassland here rewarded us with great sightings in the good, late afternoon light. Some of the highlights included a good number of Sunda Teal, Little Pied and Little Black Cormorants, Australian Pelican – a nice surprise, sneaky Ruddy-breasted Crake, a plethora of waders including splendid Beach Stone- curlew and Javan and the very sought-after Oriental Plover, smashing Little Tern in full breeding plumage, Island Collared Dove, Savanna Nightjar, Cave Swiftlet hawking insects over the ponds, and cracking Cerulean Kingfisher. -
Tree Species Composition and Configuration Based on Squirrel Behaviour Pattern in Selected Malaysian Urban Parks
TREE SPECIES COMPOSITION AND CONFIGURATION BASED ON SQUIRREL BEHAVIOUR PATTERN IN SELECTED MALAYSIAN URBAN PARKS NORAINI BAHARI A thesis submitted in fulfilment of the requirements for the award of the degree of Doctor of Philosophy Faculty of Built Environment and Surveying Universiti Teknologi Malaysia AUGUST 2019 DEDICATION This thesis is dedicated to: Mak and Abah Nur Adlina, Muhammad Imran, Muhammad Aiman and Nurin Syuhada iv ACKNOWLEDGEMENT In the Name of Allah, the Most Beneficent, the Most Merciful. Firstly, I would like to express my sincere gratitude to my supervisor Professor Dr. Ismail bin Said for the continuous support of my PhD study and related research, for his patience, motivation, and knowledge sharing. His guidance has helped me a lot in completing this research and writing of this thesis. To my first co- supervisor, I would like to thank Associate Professor Dr. Ismail Mohamad for his insightful comments and guidance in the statistical aspects in this PhD research. Not forgetting, my second co-supervisor Dr. Noradila Rusli @ Ruslik for her tireless guidance throughout the research in the GIS application. I am also grateful to Dr. Nurul Nadiah Sahimi and Dr. Nur Huzeima Mohd Hussain for their enlightenment and discussions we have together. Last but not least, my dearest sister Hayati for supporting me spiritually, emotionally and financially. Finally, I would like to express my profound gratitude to my B12 beloved postgraduate friends - Mega, Nurun, Amalina, Jo, Irfan, Ibu Arty, Adik Yeo and Janna for their continuous encouragement throughout my years of PhD study in UTM. v ABSTRACT In Malaysian urban parks, observing wildlife activity, particularly squirrels, is not a popular recreational activity among their users. -
Indonesia 24 September to 15 October 2013
Indonesia 24 September to 15 October 2013 Dave D Redfield Mammal Tour Picture: Sunda Flying Lemur (Colugo) with young by Richard White Report compiled by Richard White The story: 5 islands, 22 days and 52 mammals... A journey to a land where lizards fly, squirrels are the size of mice, civets look like otters and deer are no bigger than small annoying poodles...Indonesia! Where did this all begin...? In late June I was thinking of heading to Asia for a break. After yet another Tasmanian winter I wanted to sweat, get soaked in a tropical rain shower, get hammered by mosquitoes...I wanted to eat food with my hands (and not get stared at), wear sandals, drink cheap beer...and of course experience an amazing diversity of life. While researching some options I contacted my former employer and good friend Adam Riley from Rockjumper Birding Tours/Indri and he suggested I touch base with a client that I had arranged trips for before. The client (and now friend!) in question, Dave Redfield, has seen an aPD]LQJYDULHW\RIWKHZRUOG¶VPDPPDO species but, at that time, had yet to visit Indonesia. So, armed with a target list and a 22 day budget, I sat down and began researching and designing a tour in search of a select suit of mammal species for Dave. Time, terrain, concentration of species and cost were considered. We settled on a few days in mammal hotspots on Java, Sumatra, Borneo, Sulawesi and finally Bali, in that order. %DOLZDVDOVRFKRVHQDVDJRRGSODFHWRZLQGGRZQDIWHUµURXJKLQJLW¶ though the rest of Indonesia. It is also worth mentioning that Dave, realising that seeing all the ZRUOG¶Vmammals in the wild is an impossible target, does count mammals seen in captivity; the target list of species was thus not what one might have expected (for example, a Red Spiny Mouse was a priority but Babirusa was not). -
A Checklist of the Mammals of South-East Asia
A Checklist of the Mammals of South-east Asia A Checklist of the Mammals of South-east Asia PHOLIDOTA Pangolin (Manidae) 1 Sunda Pangolin (Manis javanica) 2 Chinese Pangolin (Manis pentadactyla) INSECTIVORA Gymnures (Erinaceidae) 3 Moonrat (Echinosorex gymnurus) 4 Short-tailed Gymnure (Hylomys suillus) 5 Chinese Gymnure (Hylomys sinensis) 6 Large-eared Gymnure (Hylomys megalotis) Moles (Talpidae) 7 Slender Shrew-mole (Uropsilus gracilis) 8 Kloss's Mole (Euroscaptor klossi) 9 Large Chinese Mole (Euroscaptor grandis) 10 Long-nosed Chinese Mole (Euroscaptor longirostris) 11 Small-toothed Mole (Euroscaptor parvidens) 12 Blyth's Mole (Parascaptor leucura) 13 Long-tailed Mole (Scaptonyx fuscicauda) Shrews (Soricidae) 14 Lesser Stripe-backed Shrew (Sorex bedfordiae) 15 Myanmar Short-tailed Shrew (Blarinella wardi) 16 Indochinese Short-tailed Shrew (Blarinella griselda) 17 Hodgson's Brown-toothed Shrew (Episoriculus caudatus) 18 Bailey's Brown-toothed Shrew (Episoriculus baileyi) 19 Long-taied Brown-toothed Shrew (Episoriculus macrurus) 20 Lowe's Brown-toothed Shrew (Chodsigoa parca) 21 Van Sung's Shrew (Chodsigoa caovansunga) 22 Mole Shrew (Anourosorex squamipes) 23 Himalayan Water Shrew (Chimarrogale himalayica) 24 Styan's Water Shrew (Chimarrogale styani) Page 1 of 17 Database: Gehan de Silva Wijeyeratne, www.jetwingeco.com A Checklist of the Mammals of South-east Asia 25 Malayan Water Shrew (Chimarrogale hantu) 26 Web-footed Water Shrew (Nectogale elegans) 27 House Shrew (Suncus murinus) 28 Pygmy White-toothed Shrew (Suncus etruscus) 29 South-east