Identification of the Meiotic Life Cycle Stage of Trypanosoma Brucei in The
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Introgression and Hybridization in Animal Parasites
Genes 2010, 1, 102-123; doi:10.3390/genes1010102 OPEN ACCESS genes ISSN 2073-4425 www.mdpi.com/journal/genes Review An Infectious Topic in Reticulate Evolution: Introgression and Hybridization in Animal Parasites Jillian T. Detwiler * and Charles D. Criscione Department of Biology, Texas A&M University, 3258 TAMU, College Station, TX 77843, USA; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-979-845-0925; Fax: +1-979-845-2891. Received: 29 April 2010; in revised form: 7 June 2010 / Accepted: 7 June 2010 / Published: 9 June 2010 Abstract: Little attention has been given to the role that introgression and hybridization have played in the evolution of parasites. Most studies are host-centric and ask if the hybrid of a free-living species is more or less susceptible to parasite infection. Here we focus on what is known about how introgression and hybridization have influenced the evolution of protozoan and helminth parasites of animals. There are reports of genome or gene introgression from distantly related taxa into apicomplexans and filarial nematodes. Most common are genetic based reports of potential hybridization among congeneric taxa, but in several cases, more work is needed to definitively conclude current hybridization. In the medically important Trypanosoma it is clear that some clonal lineages are the product of past hybridization events. Similarly, strong evidence exists for current hybridization in human helminths such as Schistosoma and Ascaris. There remain topics that warrant further examination such as the potential hybrid origin of polyploid platyhelminths. -
Pronunciation Guide to Microorganisms
Pronunciation Guide to Microorganisms This pronunciation guide is provided to aid each student in acquiring a greater ease in discussing, describing, and using specific microorganisms. Please note that genus and species names are italicized. If they cannot be italicized, then they should be underlined (example: a lab notebook). Prokaryotic Species Correct Pronunciation Acetobacter aceti a-se-toh-BAK-ter a-SET-i Acetobacter pasteurianus a-se-toh-BAK-ter PAS-ter-iann-us Acintobacter calcoacetius a-sin-ee-toe-BAK-ter kal-koh-a-SEE-tee-kus Aerococcus viridans (air-o)-KOK-kus vi-ree-DANS Agrobacterium tumefaciens ag-roh-bak-TEAR-ium too-me-FAY-she-ens Alcaligenes denitrificans al-KAHL-li-jen-eez dee-ni-TREE-fee-cans Alcaligenes faecalis al-KAHL-li-jen-eez fee-KAL-is Anabaena an-na-BEE-na Azotobacter vinelandii a-zoe-toe-BAK-ter vin-lan-DEE-i Bacillus anthracis bah-SIL-lus AN-thray-sis Bacillus lactosporus bah-SIL-lus LAK-toe-spore-us Bacillus megaterium bah-SIL-lus Meg-a-TEER-ee-um Bacillus subtilis bah-SIL-lus SA-til-us Borrelia recurrentis bore-RELL-ee-a re-kur-EN-tis Branhamella catarrhalis bran-hem-EL-ah cat-arr-RAH-lis Citrobacter freundii sit-roe-BACK-ter FROND-ee-i Clostridium perfringens klos-TREH-dee-um per-FRINGE-enz Clostridium sporogenes klos-TREH-dee-um spore-AH-gen-ease Clostridium tetani klos-TREH-dee-um TET-ann-ee Corynebacterium diphtheriae koh-RYNE-nee-back-teer-ee-um dif-THEE-ry-ee Corynebacterium hofmanni koh-RYNE-nee-back-teer-ee-um hoff-MAN-eye Corynebacterium xerosis koh-RYNE-nee-back-teer-ee-um zer-OH-sis Enterobacter -
Multigene Eukaryote Phylogeny Reveals the Likely Protozoan Ancestors of Opis- Thokonts (Animals, Fungi, Choanozoans) and Amoebozoa
Accepted Manuscript Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opis- thokonts (animals, fungi, choanozoans) and Amoebozoa Thomas Cavalier-Smith, Ema E. Chao, Elizabeth A. Snell, Cédric Berney, Anna Maria Fiore-Donno, Rhodri Lewis PII: S1055-7903(14)00279-6 DOI: http://dx.doi.org/10.1016/j.ympev.2014.08.012 Reference: YMPEV 4996 To appear in: Molecular Phylogenetics and Evolution Received Date: 24 January 2014 Revised Date: 2 August 2014 Accepted Date: 11 August 2014 Please cite this article as: Cavalier-Smith, T., Chao, E.E., Snell, E.A., Berney, C., Fiore-Donno, A.M., Lewis, R., Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa, Molecular Phylogenetics and Evolution (2014), doi: http://dx.doi.org/10.1016/ j.ympev.2014.08.012 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. 1 1 Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts 2 (animals, fungi, choanozoans) and Amoebozoa 3 4 Thomas Cavalier-Smith1, Ema E. Chao1, Elizabeth A. Snell1, Cédric Berney1,2, Anna Maria 5 Fiore-Donno1,3, and Rhodri Lewis1 6 7 1Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK. -
Protist Phylogeny and the High-Level Classification of Protozoa
Europ. J. Protistol. 39, 338–348 (2003) © Urban & Fischer Verlag http://www.urbanfischer.de/journals/ejp Protist phylogeny and the high-level classification of Protozoa Thomas Cavalier-Smith Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK; E-mail: [email protected] Received 1 September 2003; 29 September 2003. Accepted: 29 September 2003 Protist large-scale phylogeny is briefly reviewed and a revised higher classification of the kingdom Pro- tozoa into 11 phyla presented. Complementary gene fusions reveal a fundamental bifurcation among eu- karyotes between two major clades: the ancestrally uniciliate (often unicentriolar) unikonts and the an- cestrally biciliate bikonts, which undergo ciliary transformation by converting a younger anterior cilium into a dissimilar older posterior cilium. Unikonts comprise the ancestrally unikont protozoan phylum Amoebozoa and the opisthokonts (kingdom Animalia, phylum Choanozoa, their sisters or ancestors; and kingdom Fungi). They share a derived triple-gene fusion, absent from bikonts. Bikonts contrastingly share a derived gene fusion between dihydrofolate reductase and thymidylate synthase and include plants and all other protists, comprising the protozoan infrakingdoms Rhizaria [phyla Cercozoa and Re- taria (Radiozoa, Foraminifera)] and Excavata (phyla Loukozoa, Metamonada, Euglenozoa, Percolozoa), plus the kingdom Plantae [Viridaeplantae, Rhodophyta (sisters); Glaucophyta], the chromalveolate clade, and the protozoan phylum Apusozoa (Thecomonadea, Diphylleida). Chromalveolates comprise kingdom Chromista (Cryptista, Heterokonta, Haptophyta) and the protozoan infrakingdom Alveolata [phyla Cilio- phora and Miozoa (= Protalveolata, Dinozoa, Apicomplexa)], which diverged from a common ancestor that enslaved a red alga and evolved novel plastid protein-targeting machinery via the host rough ER and the enslaved algal plasma membrane (periplastid membrane). -
CH28 PROTISTS.Pptx
9/29/14 Biosc 41 Announcements 9/29 Review: History of Life v Quick review followed by lecture quiz (history & v How long ago is Earth thought to have formed? phylogeny) v What is thought to have been the first genetic material? v Lecture: Protists v Are we tetrapods? v Lab: Protozoa (animal-like protists) v Most atmospheric oxygen comes from photosynthesis v Lab exam 1 is Wed! (does not cover today’s lab) § Since many of the first organisms were photosynthetic (i.e. cyanobacteria), a LOT of excess oxygen accumulated (O2 revolution) § Some organisms adapted to use it (aerobic respiration) Review: History of Life Review: Phylogeny v Which organelles are thought to have originated as v Homology is similarity due to shared ancestry endosymbionts? v Analogy is similarity due to convergent evolution v During what event did fossils resembling modern taxa suddenly appear en masse? v A valid clade is monophyletic, meaning it consists of the ancestor taxon and all its descendants v How many mass extinctions seem to have occurred during v A paraphyletic grouping consists of an ancestral species and Earth’s history? Describe one? some, but not all, of the descendants v When is adaptive radiation likely to occur? v A polyphyletic grouping includes distantly related species but does not include their most recent common ancestor v Maximum parsimony assumes the tree requiring the fewest evolutionary events is most likely Quiz 3 (History and Phylogeny) BIOSC 041 1. How long ago is Earth thought to have formed? 2. Why might many organisms have evolved to use aerobic respiration? PROTISTS! Reference: Chapter 28 3. -
23.3 Groups of Protists
Chapter 23 | Protists 639 cysts that are a protective, resting stage. Depending on habitat of the species, the cysts may be particularly resistant to temperature extremes, desiccation, or low pH. This strategy allows certain protists to “wait out” stressors until their environment becomes more favorable for survival or until they are carried (such as by wind, water, or transport on a larger organism) to a different environment, because cysts exhibit virtually no cellular metabolism. Protist life cycles range from simple to extremely elaborate. Certain parasitic protists have complicated life cycles and must infect different host species at different developmental stages to complete their life cycle. Some protists are unicellular in the haploid form and multicellular in the diploid form, a strategy employed by animals. Other protists have multicellular stages in both haploid and diploid forms, a strategy called alternation of generations, analogous to that used by plants. Habitats Nearly all protists exist in some type of aquatic environment, including freshwater and marine environments, damp soil, and even snow. Several protist species are parasites that infect animals or plants. A few protist species live on dead organisms or their wastes, and contribute to their decay. 23.3 | Groups of Protists By the end of this section, you will be able to do the following: • Describe representative protist organisms from each of the six presently recognized supergroups of eukaryotes • Identify the evolutionary relationships of plants, animals, and fungi within the six presently recognized supergroups of eukaryotes • Identify defining features of protists in each of the six supergroups of eukaryotes. In the span of several decades, the Kingdom Protista has been disassembled because sequence analyses have revealed new genetic (and therefore evolutionary) relationships among these eukaryotes. -
Trichonympha Cf
MOLECULAR PHYLOGENETICS OF TRICHONYMPHA CF. COLLARIS AND A PUTATIVE PYRSONYMPHID: THE RELEVANCE TO THE ORIGIN OF SEX by JOEL BRYAN DACKS B.Sc. The University of Alberta, 1995 A THESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER'S OF SCIENCE in THE FACULTY OF GRADUATE STUDIES (Department of Zoology) We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA April 1998 © Joel Bryan Dacks, 1998 In presenting this thesis in partial fulfilment of the requirements for an advanced degree at the University of British Columbia, I agree that the Library shall make it freely available for reference and study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the head of my department or by his or her representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. Department of ~2—oc)^Oa^ The University of British Columbia Vancouver, Canada Date {X^ZY Z- V. /^P DE-6 (2/88) Abstract Why sex evolved is one of the central questions in evolutionary genetics. To address this question I have undertaken a molecular phylogenetic study of two candidate lineages to determine the first sexual line. In my thesis the hypermastigotes are confirmed as closely related to the trichomonads in the phylum Parabasalia and found to be more deeply divergent than a putative pyrsonymphid. This means that the Parabasalia are the first sexual lineage. From this I go on to infer that the ancestral sexual cycle included facultative sex. -
Novel Pellicle Surface Patterns on Euglena Obtusa (Euglenophyta) from the Marine Benthic Environment: Implications for Pellicle Development and Evolution1
J. Phycol. 44, 132–141 (2008) Ó 2008 Phycological Society of America DOI: 10.1111/j.1529-8817.2007.00447.x NOVEL PELLICLE SURFACE PATTERNS ON EUGLENA OBTUSA (EUGLENOPHYTA) FROM THE MARINE BENTHIC ENVIRONMENT: IMPLICATIONS FOR PELLICLE DEVELOPMENT AND EVOLUTION1 Heather J. Esson2 Department of Botany, University of British Columbia, Vancouver, British Columbia, Canada and Brian S. Leander Departments of Botany and Zoology, University of British Columbia, Vancouver, British Columbia, Canada Euglena obtusa F. Schmitz possesses novel pellicle the cell; Wp, thenumberofwhorlsofexponential surface patterns, including the greatest number of strip reduction strips (120) and the most posterior subwhorls of strip reduction in any euglenid described so far. Although the subwhorls form a mathematically lin- A number of phylogenetic relationships within ear pattern of strip reduction, the pattern observed the Euglenophyta have been resolved in recent here differs from the linear pattern described for years due to the utilization of molecular and mor- Euglena mutabilis F. Schmitz in that it contains seven phological data. For example, extensive taxon sam- linear subwhorls, rather than three, and is develop- pling and phylogenetic analyses using ribosomal mentally equivalent to three whorls of exponential DNA have resulted in the resurrection of the genus reduction, rather than two. These properties imply Monomorphina (Marin et al. 2003) and the designa- that the seven-subwhorled linear pattern observed in tion of a novel genus, Discoplastis (Triemer et al. E. obtusa is evolutionarily derived from an ancestral 2006). Moreover, morphological studies of the bilinear pattern, rather than from a linear pattern, euglenid cytoskeleton, or pellicle, have confirmed of strip reduction. -
Protozoan Parasites
Welcome to “PARA-SITE: an interactive multimedia electronic resource dedicated to parasitology”, developed as an educational initiative of the ASP (Australian Society of Parasitology Inc.) and the ARC/NHMRC (Australian Research Council/National Health and Medical Research Council) Research Network for Parasitology. PARA-SITE was designed to provide basic information about parasites causing disease in animals and people. It covers information on: parasite morphology (fundamental to taxonomy); host range (species specificity); site of infection (tissue/organ tropism); parasite pathogenicity (disease potential); modes of transmission (spread of infections); differential diagnosis (detection of infections); and treatment and control (cure and prevention). This website uses the following devices to access information in an interactive multimedia format: PARA-SIGHT life-cycle diagrams and photographs illustrating: > developmental stages > host range > sites of infection > modes of transmission > clinical consequences PARA-CITE textual description presenting: > general overviews for each parasite assemblage > detailed summaries for specific parasite taxa > host-parasite checklists Developed by Professor Peter O’Donoghue, Artwork & design by Lynn Pryor School of Chemistry & Molecular Biosciences The School of Biological Sciences Published by: Faculty of Science, The University of Queensland, Brisbane 4072 Australia [July, 2010] ISBN 978-1-8649999-1-4 http://parasite.org.au/ 1 Foreword In developing this resource, we considered it essential that -
Brown Algae and 4) the Oomycetes (Water Molds)
Protista Classification Excavata The kingdom Protista (in the five kingdom system) contains mostly unicellular eukaryotes. This taxonomic grouping is polyphyletic and based only Alveolates on cellular structure and life styles not on any molecular evidence. Using molecular biology and detailed comparison of cell structure, scientists are now beginning to see evolutionary SAR Stramenopila history in the protists. The ongoing changes in the protest phylogeny are rapidly changing with each new piece of evidence. The following classification suggests 4 “supergroups” within the Rhizaria original Protista kingdom and the taxonomy is still being worked out. This lab is looking at one current hypothesis shown on the right. Some of the organisms are grouped together because Archaeplastida of very strong support and others are controversial. It is important to focus on the characteristics of each clade which explains why they are grouped together. This lab will only look at the groups that Amoebozoans were once included in the Protista kingdom and the other groups (higher plants, fungi, and animals) will be Unikonta examined in future labs. Opisthokonts Protista Classification Excavata Starting with the four “Supergroups”, we will divide the rest into different levels called clades. A Clade is defined as a group of Alveolates biological taxa (as species) that includes all descendants of one common ancestor. Too simplify this process, we have included a cladogram we will be using throughout the SAR Stramenopila course. We will divide or expand parts of the cladogram to emphasize evolutionary relationships. For the protists, we will divide Rhizaria the supergroups into smaller clades assigning them artificial numbers (clade1, clade2, clade3) to establish a grouping at a specific level. -
Supporting Information Tibayrenc and Ayala 10.1073/Pnas.1212452109
Supporting Information Tibayrenc and Ayala 10.1073/pnas.1212452109 Table S1. Species surveyed and their references Species References Bacteria Bacillus sp (1, 2) Bacillus anthracis (3, 4) Bacillus cereus (5–7) Bacillus subtilis (8) Bartonella bacilliformis (9) Bartonella henselae (10) Bartonella quintana (11) Borrelia sp (12) Burkholderia sp (2) Burckholderia mallei (13) Burckholderia oklahomensis (13) Burkholderia pseudomallei (6, 7, 13, 14) Burckholderia thailandensis (13) Campylobacter coli (15) Campylobacter jejuni (7, 15) Enterococcus feacalis (16, 17) Enterococcus faecium (7, 16, 17) Escherichia coli (7, 8, 18–28) Francisella tularensis (22) Haemophilus influenzae (7) Helicobacter pylori (6, 7, 24, 29) Legionella pneumophila (30–33) Listeria sp (34) Listeria monocytogenes (35) Moraxella catarrhalis (7) Mycobacterium bovis (36) Mycobacterium tuberculosis (3, 36–42) Neisseria gonorrheae (7, 18, 43–45) Neisseria lactamica (2, 18, 43–45) Neisseria meningitidis (2, 6, 7, 18, 40, 41, 43–56) Pseudomonas aeruginosa (57–59) Pseudomonas syringae (60) Salmonella enterica (61) Salmonella enterica ser typhi (3, 37, 62) Staphylococcus aureus (6, 7, 17, 24, 29, 41, 55, 62–64) Staphylococcus epidermidis (7, 64) Streptococcus agalactiae (7, 65) Streptococcus mitis (66, 67) Streptococcus oralis (66, 67) Streptococcus pneumoniae (6, 7, 17, 41, 65–72) Streptococcus pseudopneumoniae (66, 67) Streptococcus pyogenes (6, 7, 17, 22, 65, 73) Vibrio cholerae (74) Vibrio parahaemolyticus (74) Vibrio vulnificus (7, 74) Xanthomonas campestris (75) Yersinia pestis (3, 18, 37) Yersinia pseudotuberculosis (76) Fungi Aspergillus fumigatus (77) Candida albicans (77–80) Candida dubliniensis (81) Cryptococcus gattiii (82) Cryptococcus neoformans (77, 83, 84) Fusarium oxysporum (85) Tibayrenc and Ayala www.pnas.org/cgi/content/short/1212452109 1of5 Table S1. -
Giardia Lamblia
UC Davis UC Davis Previously Published Works Title Eight unique basal bodies in the multi-flagellated diplomonad Giardia lamblia. Permalink https://escholarship.org/uc/item/1jj1j595 Journal Cilia, 5(1) ISSN 2046-2530 Authors McInally, Shane G Dawson, Scott C Publication Date 2016 DOI 10.1186/s13630-016-0042-4 Peer reviewed eScholarship.org Powered by the California Digital Library University of California McInally and Dawson Cilia (2016) 5:21 DOI 10.1186/s13630-016-0042-4 Cilia REVIEW Open Access Eight unique basal bodies in the multi‑flagellated diplomonad Giardia lamblia Shane G. McInally and Scott C. Dawson* Abstract Giardia lamblia is an intestinal parasitic protist that causes significant acute and chronic diarrheal disease worldwide. Giardia belongs to the diplomonads, a group of protists in the supergroup Excavata. Diplomonads are characterized by eight motile flagella organized into four bilaterally symmetric pairs. Each of the eight Giardia axonemes has a long cytoplasmic region that extends from the centrally located basal body before exiting the cell body as a membrane- bound flagellum. Each basal body is thus unique in its cytological position and its association with different cytoskel- etal features, including the ventral disc, axonemes, and extra-axonemal structures. Inheritance of these unique and complex cytoskeletal elements is maintained through basal body migration, duplication, maturation, and their subse- quent association with specific spindle poles during cell division. Due to the complex composition and inheritance of specific basal bodies and their associated structures, Giardia may require novel basal body-associated proteins. Thus, protists such as Giardia may represent an undiscovered source of novel basal body-associated proteins.