Chapter 6 SUMMARY and DISCUSSION

Total Page:16

File Type:pdf, Size:1020Kb

Chapter 6 SUMMARY and DISCUSSION ' ’ V . Y) , ’*1^. Chapter 6 SUMMARY AND DISCUSSION SUMMARY AND DISCUSSION The present study is an addition and significant contribution in taxonomy of Indian watermoulds isolated from different closed water systems (Lentic water system) such as lakes, ponds and ditches from Pune City, Maharashtra State, India. The taxonomy of the isolated watermoulds mainly morphological characters reflected several interesting morphological variations. The exhaustive data of the occurrence, distribution and seasonal periodicity, major physicochemical parameters certainly add valuable information in ecology of the tropical watermoulds. Zoospore release mechanism from the zoosporangia of the different genera is a very diffent approach and probable criterion for classification of watermoulds. The results presented showed that distribution of watermoulds was different at all sites and often specific to the site. The studies on different water bodies exhibited more generic and species diversity of watermoulds in ponds than in lakes. In all, 11 genera and 28 species were isolated of which the order Saprolegniales, the genus Achlya and eccentric forms were dominant. While working on taxonomy of watermoulds several morphological variations were noted in some species. These variations were not only in vegetative thallii but also in reproductive structures. In Rozella allomycis the morphological variation was observed in resting spores, which were three times larger per segment than previously recorded spores by Sparrow (1960) and Kapadnis (1978). Blastocladia incrassata showed distinct variation in thallus branching which was mostly irregular, dichotomous or sometimes racemose, which totally differs than the branching system observed by Steciow (2001). She reported only thick terminal lobes in the thallus. In the species, Brevilegnia longicaulis variation was observed in sexual and asexual reproductive structures. In addition to the general characters some interesting findings like sympodial renewal of sporangia, presence of gemmae, pyriform, spherical, long stalked, hyaline papillae on hyphae and occasional occurrence of androgynous antheridia were also highlighted. The species of Brevilegnia showed remarkable 201 morphological diversity thus it might need taxonomical revision. In Saprolegnia torulosa the non-functional antheridial extension is at the base of the upper oogonium, which after disarticulation becomes the tip of the subsequent, catenulate oogonium, is an interesting feature in the genus Saprolegnia.ln the present studies, the functional oospheres were frequently observed in Achlya bisexualis, which after fertilization become functional oospores, however, many research workers recorded abortive oospheres very frequently. Though the genus Achlya is mainly characterized either by the presence of monoclinous, or diclinous and/or androgynous antheridial branches, A. reciirva predominantly showed androgynous antheridial branches, whereas in A. orion monoclinous antheridial branches were prominently noted in the present studies. In addition, A. orion showed sessile to subsessile oogonial stalks. Aphanomyces laevis and Pythium torulosum were recorded throughout the study period from all the closed waterbodies and showed their constant occurrence. Aphanomyces laevis was interesting as it showed larvicidal activity on mosquito larvae and can be a possible biological control. During the study period, two new species, namely Achlya species and Saprolegnia anomalies were proposed on the basis of different morphological characters. Of which in Achlya species distinctly large, balloon like projections from hyphal walls intermingling with true oogonia having brown oospores are the characteristic features, whereas, in Saprolegnia anomalies many proliferating tubes developed from the walls of sporangia and gemmae at the time of zoospore release which is a unique feature as compared to the other species of Saprolegnia except S. anisospora, where only gemmae develop proliferating tubes. Brevilegnia longicaulis and Saprolegnia torulosa are new to India. Blastocladia arborata, B. incrassata, Allomyces javanicus, Achlya bisexualis and A. diffusa are new to Maharashtra State. An Acacia nilotica L. pod is a new substratum record for the species of Gonapodya and Blastocladia. Laboratory experiments showed strict host specificity of Rozella allomycis and Olpidiopsis achlyae. When in cultures of Allomyces javanicus, A. moniliformis and A. arbuscula an endoparasite R. allomycis was inoculated, it 202 showed host specificity only for A. arbiisciila. Similarly for O. achlyae, cultures of Achlya orion, A. oblongata, A. bisexualis, A. flagellata were used and the latter was seen as a specific host. The taxonomical data on watermoulds exhibited a very wide range of morphological diversities. In this context, diversity in thallus organization, asexual and sexual reproductive structures and sexual reproduction in different genera and species was discussed. In addition, diversity in habitats, baits and colony growth of watermoulds was also described. Video recording of sequential events of isogametangial fusion and formation of zygote of Allomyces arbuscula was executed for the first time. Powell and Blackwell (1998) worked on the phenetic analysis of genera of the Saprolegniaceae and concluded that nonsexual characters dominantly provide intergeneric taxonomic separation and delineation of Saprolegniaceae, whereas, sexual (oogonial and antheridial) characters are generally more variable and perhaps of great utility when applied intragenerically. The video recording of zoospore (nonsexual structure) release from the zoosporangia of the different genera in the present studies gives support to the statement made by Powell and Blackwell. The extensive study of live sequential events like protoplasm differentiation leading to formation of zoospores, their movement within zoosporangium, actual mechanism of release of zoospores and their fate after release were recorded by using CCD camera with detailed specifications in different genera of zoosporic fungi. All these details and variations strongly support the above mentioned phenetic analysis put forth by Powell and Blackwell. Most striking feature of zoospore release was recorded in Rozella allomycis where zoospores get released from zoosporangia by three different methods: plug formation, pouch formation and pore formation, of these, video recording of the former two methods are innovative. In addition, video recording of mechanism of zoospore release in nine different genera was accomplished. The classificatory systems so far established are totally based on morphology and reproductive structures in the thallus but nobody has realized the importance of mechanism of zoospore release, which is probably an important 203 criterion to give a proper status to the genus in classification. According to Hohnk (1933) small vacuoles inside the zoospores get disappeared to create a strong pressure within the sporangium causing the passive escape of the zoospores. However, Dick (1973) stated that the pressure of hydration and differential viscosity causes the zoospore release, however he did not give convincing proof. But Dick and Johnson et al. (2002) agreed that there is no adequate hypothesis to explain spore release in watermoulds. Padgett and Johnson (2004) made video recording of zoospore release in Isoachlya and stated that it has greater significance in taxonomy for the confirmation of the species. In the present studies, the video recording of zoospore release in live cultures of watermoulds, the presence of gradually increasing movement of all zoospores within their boundary inside the zoosporangium at the time of release create a pressure on the thin discharge papilla which is a convincing evidence to explain zoospore release which could be a realistic proof to put forth the hypothesis of zoospore release. This may be significant and new criterion for the classification of the genera in watermoulds. Though the traditional criteria are useful in classification of watermoulds and accepted by mycologists, importance of phylogenetic studies based on molecular sequencing cannot be ingnored for accurracy. In the present studies, S. anomalies has been established as a new species on the basis of morphological features but its status has been confirmed by molecular sequencing and its position, by creating a phylogenetic tree. Though ponds and lakes are the types of closed water system, they were treated as separate entities in the present studies for the data analysis. The lakes under study have changing periphery as per the amount of rainfall during that year. However, the different water sources such as nearby rivers, streams and brooks also add some water in lakes. On the other hand, the ponds have stagnant water with limited periphery. Therefore, ‘aliens’, ‘immigrants’ and ‘transients’ were common in lakes whereas, ‘indwellers’ or ‘indigenous’ species were active in ponds. In polluted lakes one ‘indweller’, two ‘inhabitants’ and five ‘aliens’ were recorded. In unpolluted ponds two ‘immigrants’, six ‘indwellers’ and two 204 ‘aliens’ were noted. In polluted pond one ‘alien’ and due to availability of substratum five ‘indwellers’ were recorded. The impact of different physicochemical parameters and seasonal fluctuations influence the occurrence and periodicity of watermoulds in closed waterbodies. The correlation within different parameters and between occurrence of watermoulds and physicochemical parameters was studied for
Recommended publications
  • Aquatic Fungi of Iceland: Biflagellate Species
    ACTA NATURALIA ISLANDICA ISSUED BY THE ICELANDIC MUSEUM OF NATURAL HISTORY (NATTURUFR£BISTOFNUN iSLANDS) The :Museum has published two volumes of Acta Naturalia Islandica in the period 1946-1971, altogether issues. From 1972 each paper will appear under its own serial number, starting with no. 21. ACTA NATURALIA ISLANDICA is a series of original articles dealing with botany, geology and zoology of Iceland. ACTA NATURALIA ISLANDICA will be published preferably in English and will appear at irregular intervals. ACTA NATURALIA ISLANDICA may be obtained: 1: on basis of institutional exchange at Museum of Natural History, P. O. Box 5320, Reykjavik. 2: as separate copies on request (charges including mailing costs) at Snaebjorn J6nsson, The English Bookshop, Hafnarstraeti 4, Reykjaik, Iceland. AQUATIC FUNGI OF ICELAND: BIFLAGELLATE SPECIES Aquatic fungi of Iceland: Biflagellate specIes T. \iV. JOHNSON, Jr. Department of Botany, Duke University, Durham, North Carolina, U. S. A. A bstmct. Fifty six species of biflagellate (zo osporic) fungi are recorded from Iceland. These represent 16 genera in 9 families of 5 orders. Structural features and variational patterns of several taxa (and species complexes) are reported. A number of representatives have not been named, or are only provisionally identified, but they are usually accorded formal descrip­ tions and their taxonomy is discussed fully. Experimental work with isolates of Achlya and Aphanomyces resulted in culturally-induced structural modifications in certain groups of taxa. Save in a few cases where new inforamation has been brought to light, species previously reported from Iceland are noted merely by citaions to the literature. No new taxa are pro­ posed.
    [Show full text]
  • Mass Flow in Hyphae of the Oomycete Achlya Bisexualis
    Mass flow in hyphae of the oomycete Achlya bisexualis A thesis submitted in partial fulfilment of the requirements for the Degree of Master of Science in Cellular and Molecular Biology in the University of Canterbury by Mona Bidanjiri University of Canterbury 2018 Abstract Oomycetes and fungi grow in a polarized manner through the process of tip growth. This is a complex process, involving extension at the apex of the cell and the movement of the cytoplasm forward, as the tip extends. The mechanisms that underlie this growth are not clearly understood, but it is thought that the process is driven by the tip yielding to turgor pressure. Mass flow, the process where bulk flow of material occurs down a pressure gradient, may play a role in tip growth moving the cytoplasm forward. This has previously been demonstrated in mycelia of the oomycete Achlya bisexualis and in single hypha of the fungus Neurospora crassa. Microinjected silicone oil droplets were observed to move in the predicted direction after the establishment of an imposed pressure gradient. In order to test for mass flow in a single hypha of A. bisexualis the work in this thesis describes the microinjection of silicone oil droplets into hyphae. Pressure gradients were imposed by the addition of hyperosmotic and hypoosmotic solutions to the hyphae. In majority of experiments, after both hypo- and hyperosmotic treatments, the oil droplets moved down the imposed gradient in the predicted direction. This supports the existence of mass flow in single hypha of A. bisexualis. The Hagen-Poiseuille equation was used to calculate the theoretical rate of mass flow occurring within the hypha and this was compared to observed rates.
    [Show full text]
  • Molecular Identification of Fungi
    Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere.
    [Show full text]
  • AACL BIOFLUX Aquaculture, Aquarium, Conservation & Legislation International Journal of the Bioflux Society
    AACL BIOFLUX Aquaculture, Aquarium, Conservation & Legislation International Journal of the Bioflux Society Freshwater oomycete isolated from net cage cultures of Oreochromis niloticus with water mold infection in the Nam Phong River, Khon Kaen Province, Thailand 1Kwanprasert Panchai, 1Chutima Hanjavanit, 2Nilubon Rujinanont, 3Shinpei Wada, 3Osamu Kurata, 4Kishio Hatai 1 Applied Taxonomic Research Center, Department of Biology, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand; 2 Department of Fisheries, Faculty of Agriculture, Khon Kaen University, Khon Kaen, 40002, Thailand; 3 Laboratory of Aquatic Medicine, School of Veterinary Medicine, Nippon Veterinary and Life Science University, Tokyo 180–8602, Japan; 4 Microbiology and Fish Disease Laboratory, Borneo Marine Research Institute, Universiti Malaysia Sabah, 88400, Kota Kinabalu, Malaysia. Corresponding author: C. Hanjavanit, [email protected] Abstract. Water mold-infected Nile tilapia (Oreochromis niloticus) from cultured net cages along the Nam Phong River, Khon Kaen Province, northeast Thailand, were collected from September 2010 to August 2011. The 34 obtained water mold isolates belonged to the genus Achlya and were identified as Achlya bisexualis, A. diffusa, A. klebsiana, A. prolifera and unidentified species of Achlya. Isolates of A. bisexualis and A. diffusa were the most abundant (35%), followed by the unidentified species of Achlya (18%) and then, A. klebsiana and A. prolifera (6% each). The ITS1-5.8S-ITS2 region of the unidentified isolates was sequenced for phylogenetic analysis. Three out of 6 isolates were indicated to be A. dubia (BKKU1005), A. bisexualis (BKKU1009 and BKKU1134), and other 3 out of 6 isolates (BKKU1117, BKKU 1118 and BKKU1127) will be an as-yet unidentified species of Achlya.
    [Show full text]
  • An Annotated List of Genus Pythium from India
    Plant Pathology & Quarantine 10(1): 120–132 (2020) ISSN 2229-2217 www.ppqjournal.org Article Doi 10.5943/ppq/10/1/14 An annotated list of genus Pythium from India Dubey MK1,2*, Yadav M1 and Upadhyay RS1 1Laboratory of Mycopathology and Microbial Technology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi - 221005, Uttar Pradesh, India 2Department of Life Sciences, School of Basic & Applied Sciences, Galgotias University, Greater Noida- 203201, Uttar Pradesh, India Dubey MK, Yadav M, Upadhyay RS 2020 – An annotated list of genus Pythium from India. Plant Pathology & Quarantine 10(1), 120–132, Doi 10.5943/PPQ/10/1/14 Abstract Up-to-date information is presented based on an intensive search of literature records on the identity, occurrence, nomenclature, substratum, host ranges, geographical distribution and literature references of the genus Pythium from India. All Pythium species published until 2020 are included in this list. The survey result of all forms of analyses revealed that India has 55 species of Pythium belonging to the phylum Oomycota indicating the presence of rich mycoflora. Distribution of these Pythium species reported so far from freshwater and terrestrial habitats of various Indian states are listed alphabetically. The most frequently collected species are Pythium aphanidermatum, P. spinosum, and P. ultimum. The majority of these species were found as a parasite on a wide range of plants in both freshwater and terrestrial environment. Overall, this systematic checklist provides the total count of Pythium species, currently known to occur in India and it is also a valued addition for comparing Pythium diversity in India as well as the world.
    [Show full text]
  • Incipient Loss of Flagella in the Genus Geolegnia
    Published in IMA Fungus 4, issue 2, 169-175, 2013 which should be used for any reference to this work 1 Incipient loss of flagella in the genusGeolegnia : the emergence of a new clade within Leptolegnia? Mónica M. Steciow1*, Enrique Lara2*, Amandine Pillonel2, Sebastián A. Pelizza1,4, Eduardo A. Lestani3, Gustavo C. Rossi4, and Lassaad Belbahri2 1Instituto de Botánica Spegazzini, 53 N° 477, (1900) La Plata, Buenos Aires, Argentina; corresponding author e-mail: [email protected]. edu.ar 2Laboratory of Soil Biology, Department of Biology, University of Neuchâtel, 11 Rue Emile Argand, CH-2000, Neuchâtel, Switzerland 3Centro de Investigaciones Ecológicas Subtropicales, Parque Nacional Iguazú /Asoc. Civil Centro de Investigaciones del Bosque Atlántico, Pto. Iguazú, Misiones, Argentina 4CEPAVE-CCT –CONICET, La Plata, Argentina *Both authors contributed equally to the work. Abstract: The genus Geolegnia represents a poorly documented group of saprolegnialean oomycetes Key words: isolated from soils as free-living organisms. Although it is morphologically similar to the facultative Oomycetes parasitic genus Leptolegnia, Geolegnia presents the uncommon property of having lost a flagellate Fast evolution stage in its lifecycle. Based on ITS and large subunit (LSU) rRNA sequence data, we show Geolegnia Phylogeny to be basal to Leptolegnia, and also introduce Geolegnia helicoides sp. nov. Using sequence data of Saprolegniales Leptolegnia available in GenBank, supplemented by data derived from culture collections, we show Internal transcribed spacer (ITS) that Geolegnia is nested within Leptolegnia, a genus characterised by its “conventional” biflagellate Large subunit (LSU) rRNA life cycle. The emergence of Geolegnia is therefore seen as a recent event, and we suggest here an evolutionary context where this loss might have been advantageous.
    [Show full text]
  • Bioprospecting of Marine Fungi from the High Arctic
    Faculty of Biosciences, Fisheries and Economics The Norwegian College of Fishery Science Bioprospecting of marine fungi from the High Arctic A study of high latitude marine fungi from understudied taxa; bioactivity potential, taxonomy and genomics Ole Christian Hagestad A dissertation for the degree of Philosophiae Doctor April 2021 Cover page “A true teacher would never tell you what to do. But he would give you the knowledge with which you could decide what would be best for you to do.” ― Christopher Pike, Sati Bioprospecting of marine fungi from the High Arctic A study of high latitude marine fungi from understudied taxa; bioactivity potential, taxonomy and genomics A dissertation submitted in partial fulfilment of the requirement for the degree of Philosophiae Doctor. Ole Christian Hagestad Tromsø April 2021 The work presented in this thesis was carried out at the Norwegian College of Fishery Sciences (NFH), UiT – The Arctic University of Norway from January 2017 to April 2021. The work was funded by UiT - The Arctic University of Norway as an independent PhD position. i Summary Marine fungi comprise a group of organisms that have been overlooked for a long time. Research interest has increased with the realization of the important ecological role and rich chemistry of marine fungi. Marine fungi have yielded thousands of new natural products the last decade, but many taxa remain unstudied. Marine fungi from the Arctic have not been reported in literature in regard to bioprospecting campaigns and represent a novel source of natural products. The aim of this thesis is to assess the potential of Arctic marine fungi to produce bioactive secondary metabolites by fermentation and genome analysis.
    [Show full text]
  • CHAPTER 29. Parasites and Pathogens: Saprolegniosis Among
    CHAPTER 29. Parasites and Pathogens: Saprolegniosis Among the Saprolegniaceae there is an assemblage of individuals that can exist at the expense of fish and other freshwater vertebrates. Since these fungi respect neither exotic aquarium inhabitants nor the catch of the fisherman -- and are thereby a troublesome and costly lot -- a lengthy literature has accumulated about them. Mycologists and others have given much study to these fungi, but the results are not always in agreement. Moreover, from the very beginning, attention was focused on describing the diseased animals, with investigators forthrightly stating (or guessing at) the causes of those diseases, and suggesting ways to combat these obnoxious creatures. To a very real degree the fungi were ignored taxonomically as is reflected in the names by which the supposed causal organisms were referred to: filaments, fungus, threads, bacteria, algae, Saprolegnia ferax, S. parasitica, or merely Saprolegnia or Achyla or Saprolegniales. At the outset, it must be confessed that there are no incontrovertible answers to three fundamental questions regarding fungus and fish associations -- are these watermolds virulent pathogens? are they able alone to cause primary infections? to what degree must the subject be compromised to enable a fungus to cause disease? Because the great majority of fish appear to escape saprolegniosis even though obviously exposed to the spores (Willoughby, 1970; Willoughby and Pickering, 1977), the fungi involved must be opportunistic facultative parasites (Neish, 1977). We will not be so bold as to answer the foregoing questions, but will present a summary of what is known of saprolegniosis, beginning with a historical survey, and ending by considering -- in a lump sum, as it were -- the various suggestions for control.
    [Show full text]
  • Taxonomical and Functional Diversity of Saprolegniales in Anzali Lagoon, Iran
    bioRxiv preprint doi: https://doi.org/10.1101/860429; this version posted November 30, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Taxonomical and functional diversity of Saprolegniales in Anzali lagoon, Iran 2 Hossein Masigol1,2, Seyed Akbar Khodaparast1, Reza Mostowfizadeh-Ghalamfarsa3, Keilor Rojas- 3 Jimenez4, Jason Nicholas Woodhouse2, Darshan Neubauer5 and Hans-Peter Grossart2,5* 4 5 1Department of Plant Protection, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran 2 6 Department of Experimental Limnology, Leibniz-Institute of Freshwater Ecology and Inland 7 Fisheries, Alte Fischerhuette 2, D-16775 Stechlin, Germany 3 8 Department of Plant Protection, School of Agriculture, Shiraz University, Shiraz, Iran 9 4Escuela de Biologia, Universidad de Costa Rica, 11501 San Jose, Costa Rica 10 5Institute of Biochemistry and Biology, University of Potsdam, Potsdam, Germany 11 *corresponding author (Email: [email protected] Phone: +49 (0)33082 699 91) 12 13 Abstract 14 Studies on the diversity, distribution and ecological role of Saprolegniales (Oomycota) in freshwater 15 ecosystems are currently receiving attention due to a greater understanding of their role in carbon 16 cycling in various aquatic ecosystems. In this study, we characterized several Saprolegniales species 17 isolated from Anzali lagoon, Gilan province, Iran, using morphological and molecular methods. Four 18 species of Saprolegnia were identified, including S. anisospora and S. diclina as first reports for Iran. 19 Evaluation of the ligno-, cellulo- and chitinolytic activities were also measured using plate assay 20 methods. Most of the Saprolegniales isolates were obtained in autumn and nearly 50% of the strains 21 showed chitinolytic and cellulolytic activities.
    [Show full text]
  • Saprolegniales, Oomycota, Straminipila Oomycota, (Saprolegniales, of Pathogens 2 Mónica M
    IMA FUNGUS · 5(2): 439–448 (2014) {%"55#7|!"%V"5"!"7 Multiple barcode assessment within the Saprolegnia-Achlya clade ARTICLE (Saprolegniales, Oomycota, Straminipila) brings order in a neglected group of pathogens Mónica M. Steciow1*, Enrique Lara2CD2>2=+2 1<+H$$&DIJNI=5PIVXX%#""=+ Aires, Argentina. 2=H+Z+NI%%\]>D3*!"""IH$@ author e-mail: [email protected] C+_ Abstract: The Saprolegnia-Achlya clade comprises species of major environmental and economic importance due Key words: __[ barcoding 3` <zH which is a major obstacle to the widespread application of molecular barcoding to identify pathogenic strains with =HN\I> quarantine implications. We assessed phylogenetic relationships of major genera using three commonly used morphology <zHHHN\I>=HN\I>> Newbya H>% HHN\I> <Newbya dichotoma sp. nov., which provided the only culture water moulds <$ $ their successive reversals rendered the inference of ancestral states impossible. This highlights even more the importance of a bar-coding strategy for saprolegniacean parasite detection and monitoring. Article info:H{P">!"%V@>{!VI!"%V@{%"Z!"%V INTRODUCTION identify them quickly and reliably, in order to apply quarantine =4+!"%% Oomycetes (or water moulds) are protists with a mycelial General strategies for detecting these parasites [ Fungi, and rely on isolation and cultivation of strains isolated from that have been relocated within Heterokonta, also known [ as Straminipila, based on their molecular phylogeny. They strategy that is time-consuming and requires highly trained are ubiquitous in freshwaters, but also in soils and in marine >[ environments, where they can be found either as parasites of species and genera require the presence of reproductive or free-living.
    [Show full text]
  • Saprolegniales, Oomycota, Straminipila Oomycota, (Saprolegniales, of Pathogens 2 Mónica M
    IMA FUNGUS · 5(2): 439–448 (2014) doi:10.5598/imafungus.2014.05.02.08 Multiple barcode assessment within the Saprolegnia-Achlya clade ARTICLE (Saprolegniales, Oomycota, Straminipila) brings order in a neglected group of pathogens Mónica M. Steciow1*, Enrique Lara2*, Christophe Paul2, Amandine Pillonel2, and Lassaad Belbahri2 1Instituto de Botánica Spegazzini, Facultad de Cs. Naturales y Museo, Universidad Nacional de La Plata, 53 N° 477, (1900) La Plata, Buenos Aires, Argentina 2Laboratory of Soil Biology, Department of Biology, University of Neuchâtel, 11 Rue Emile Argand, CH-2000 Neuchâtel, Switzerland; corresponding author e-mail: [email protected] *Both these authors contributed equally to the work. Abstract: The Saprolegnia-Achlya clade comprises species of major environmental and economic importance due Key words: to their negative impact on aquaculture and aquatic ecosystems by threatening fishes, amphibians, and crustaceans. barcoding However, their taxonomy and phylogenetic relationships remain unresolved and suffer from many inconsistencies, ITS which is a major obstacle to the widespread application of molecular barcoding to identify pathogenic strains with LSU rRNA quarantine implications. We assessed phylogenetic relationships of major genera using three commonly used morphology markers (ITS, SSU rRNA, and LSU rRNA). A consensus tree of the three genes provided support for nine clades Newbya encompassing eleven documented genera and a new clade (SAP1) that has not been described morphologically. SSU rRNA In the course of this study, we isolated a new species, Newbya dichotoma sp. nov., which provided the only culture water moulds available for this genus. In parallel, we attempted to summarize the evolution of traits in the different genera, but zoospore discharge their successive reversals rendered the inference of ancestral states impossible.
    [Show full text]
  • Characterization of Achlya Americana and A. Bisexualis (Saprolegniales, Oomycota) Isolated from Freshwater Environments in Korea
    MYCOBIOLOGY 2019, VOL. 47, NO. 2, 135–142 https://doi.org/10.1080/12298093.2018.1551855 RESEARCH ARTICLE Characterization of Achlya americana and A. bisexualis (Saprolegniales, Oomycota) Isolated from Freshwater Environments in Korea Young-Joon Choia, Seo Hee Leeb, Thuong T. T. Nguyenb, Bora Nama and Hyang Burm Leeb aDepartment of Biology, College of Natural Sciences, Kunsan National University, Gunsan, Korea; bDivision of Food Technology, Biotechnology and Agrochemistry, College of Agriculture and Life Sciences, Chonnam National University, Gwangju, Korea ABSTRACT ARTICLE HISTORY Many members of the Saprolegniales (Oomycete) cause mycoses and disorders of fishes, of Received 1 October 2018 which Achlya and Saprolegnia are most ubiquitous genera worldwide. During a survey of the Accepted 7 November 2018 diversity of freshwater oomycetes in Korea, we collected seven isolates of Achlya, for which KEYWORDS morphological and molecular phylogenetic analyses enabled them to identify as Achlya Achlyaceae; emerging americana and Achlya bisexualis. In Korea, only a species of Achlya, A. prolifera, has been pre- disease; freshwater fungi; viously found to cause seedling rot on rice (Oryza sativa), but none of the two species have mycosis; oomycetes been reported yet. Importantly, A. bisexualis was isolated from a live fish, namely rice fish (Oryzias sinensis), as well as freshwater, and this is the first report of Achlya-causing mycoses on freshwater fishes in Korea. The presence of A. americana and A. bisexualis on live fish in Korea should be closely monitored, as considering the well-known broad infectivity of these species it has the potential to cause an important emerging disease on aquacul- ture industry.
    [Show full text]