Incipient Loss of Flagella in the Genus Geolegnia
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Aquatic Fungi of Iceland: Biflagellate Species
ACTA NATURALIA ISLANDICA ISSUED BY THE ICELANDIC MUSEUM OF NATURAL HISTORY (NATTURUFR£BISTOFNUN iSLANDS) The :Museum has published two volumes of Acta Naturalia Islandica in the period 1946-1971, altogether issues. From 1972 each paper will appear under its own serial number, starting with no. 21. ACTA NATURALIA ISLANDICA is a series of original articles dealing with botany, geology and zoology of Iceland. ACTA NATURALIA ISLANDICA will be published preferably in English and will appear at irregular intervals. ACTA NATURALIA ISLANDICA may be obtained: 1: on basis of institutional exchange at Museum of Natural History, P. O. Box 5320, Reykjavik. 2: as separate copies on request (charges including mailing costs) at Snaebjorn J6nsson, The English Bookshop, Hafnarstraeti 4, Reykjaik, Iceland. AQUATIC FUNGI OF ICELAND: BIFLAGELLATE SPECIES Aquatic fungi of Iceland: Biflagellate specIes T. \iV. JOHNSON, Jr. Department of Botany, Duke University, Durham, North Carolina, U. S. A. A bstmct. Fifty six species of biflagellate (zo osporic) fungi are recorded from Iceland. These represent 16 genera in 9 families of 5 orders. Structural features and variational patterns of several taxa (and species complexes) are reported. A number of representatives have not been named, or are only provisionally identified, but they are usually accorded formal descrip tions and their taxonomy is discussed fully. Experimental work with isolates of Achlya and Aphanomyces resulted in culturally-induced structural modifications in certain groups of taxa. Save in a few cases where new inforamation has been brought to light, species previously reported from Iceland are noted merely by citaions to the literature. No new taxa are pro posed. -
Mass Flow in Hyphae of the Oomycete Achlya Bisexualis
Mass flow in hyphae of the oomycete Achlya bisexualis A thesis submitted in partial fulfilment of the requirements for the Degree of Master of Science in Cellular and Molecular Biology in the University of Canterbury by Mona Bidanjiri University of Canterbury 2018 Abstract Oomycetes and fungi grow in a polarized manner through the process of tip growth. This is a complex process, involving extension at the apex of the cell and the movement of the cytoplasm forward, as the tip extends. The mechanisms that underlie this growth are not clearly understood, but it is thought that the process is driven by the tip yielding to turgor pressure. Mass flow, the process where bulk flow of material occurs down a pressure gradient, may play a role in tip growth moving the cytoplasm forward. This has previously been demonstrated in mycelia of the oomycete Achlya bisexualis and in single hypha of the fungus Neurospora crassa. Microinjected silicone oil droplets were observed to move in the predicted direction after the establishment of an imposed pressure gradient. In order to test for mass flow in a single hypha of A. bisexualis the work in this thesis describes the microinjection of silicone oil droplets into hyphae. Pressure gradients were imposed by the addition of hyperosmotic and hypoosmotic solutions to the hyphae. In majority of experiments, after both hypo- and hyperosmotic treatments, the oil droplets moved down the imposed gradient in the predicted direction. This supports the existence of mass flow in single hypha of A. bisexualis. The Hagen-Poiseuille equation was used to calculate the theoretical rate of mass flow occurring within the hypha and this was compared to observed rates. -
Molecular Identification of Fungi
Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere. -
21 Pathogens of Harmful Microalgae
21 Pathogens of Harmful Microalgae RS. Salomon and I. Imai 2L1 Introduction Pathogens are any organisms that cause disease to other living organisms. Parasitism is an interspecific interaction where one species (the parasite) spends the whole or part of its life on or inside cells and tissues of another living organism (the host), from where it derives most of its food. Parasites that cause disease to their hosts are, by definition, pathogens. Although infection of metazoans by other metazoans and protists are the more fre quently studied, there are interactions where both host and parasite are sin gle-celled organisms. Here we describe such interactions involving microal gae as hosts. The aim of this chapter is to review the current status of research on pathogens of harmful microalgae and present future perspec tives within the field. Pathogens with the ability to impair and kill micro algae include viruses, bacteria, fungi and a number of protists (see reviews by Elbrachter and Schnepf 1998; Brussaard 2004; Park et al. 2004; Mayali and Azam 2004; Ibelings et al. 2004). Valuable information exists from non-harm ful microalgal hosts, and these studies will be referred to throughout the text. Nevertheless, emphasis is given to cases where hosts are recognizable harmful microalgae. 21.2 Viruses Viruses and virus-like particles (VLPs) have been found in more than 50 species of eukaryotic microalgae, and several of them have been isolated in laboratory cultures (Brussaard 2004; Nagasaki et al. 2005). These viruses are diverse both in size and genome type, and some of them infect harmful algal bloom (HAB)-causing species (Table 21.1). -
Chemical Signaling in Diatom-Parasite Interactions
Friedrich-Schiller-Universität Jena Chemisch-Geowissenschaftliche Fakultät Max-Planck-Institut für chemische Ökologie Chemical signaling in diatom-parasite interactions Masterarbeit zur Erlangung des akademischen Grades Master of Science (M. Sc.) im Studiengang Chemische Biologie vorgelegt von Alina Hera geb. am 30.03.1993 in Kempten Erstgutachter: Prof. Dr. Georg Pohnert Zweitgutachter: Dr. rer. nat. Thomas Wichard Jena, 21. November 2019 Table of contents List of Abbreviations ................................................................................................................ III List of Figures .......................................................................................................................... IV List of Tables ............................................................................................................................. V 1. Introduction ............................................................................................................................ 1 2. Objectives of the Thesis ....................................................................................................... 11 3. Material and Methods ........................................................................................................... 12 3.1 Materials ......................................................................................................................... 12 3.2 Microbial strains and growth conditions ........................................................................ 12 3.3 -
A Novel Toti-Like Virus from a Plant Pathogenic Oomycete Globisporangium T Splendens Kazuki Shiba1, Chiharu Hatta1, Shinsaku Sasai, Motoaki Tojo, Satoshi T
Virology 537 (2019) 165–171 Contents lists available at ScienceDirect Virology journal homepage: www.elsevier.com/locate/virology A novel toti-like virus from a plant pathogenic oomycete Globisporangium T splendens Kazuki Shiba1, Chiharu Hatta1, Shinsaku Sasai, Motoaki Tojo, Satoshi T. Ohki, ∗ Tomofumi Mochizuki Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Osaka, 599-8531, Japan ARTICLE INFO ABSTRACT Keywords: We investigated virus infection in the plant pathogenic oomycete Globisporangium splendens, formerly classified Globisporangium splendens as Pythium splendens, in Japan. From 12 strains investigated, three strains contained virus-like double-stranded Next generation sequencing (dsRNA). Next-generation sequencing revealed that the G. splendens strain MAFF 425508 and MAFF 305867 Oomycete virus contained a virus related to toti-like viruses, that we named Pythium splendens RNA virus 1 (PsRV1). PsRV1 has Pythium a ca. 5700 nt-length genome encoding two overlapping open reading frames (ORFs). The ORF2 encodes an RNA- Totivirus dependent RNA polymerase (RdRp). Phylogenetic analysis with deduced RdRp amino acid sequences indicated Vertical transmission that PsRV1 was closely related to Pythium polare RNA virus 1 (PpRV1) from G. polare infecting mosses in the Arctic. PsRV1 was vertically transmitted through the hyphal swellings, vegetative organs of G. splendens, in a temperature-dependent manner. Also, we showed that PsRV1 infected in a symptomless manner. 1. Introduction (Pythium nunn virus 1) from mycoparasitic G. nunn (Shiba et al., 2018) and three virus-like sequences, Pythium polare RNA virus 1 (PpRV1), Viruses that infect fungi are known as mycoviruses. Since a my- Pythium polare RNA virus 2 (PpRV2) and Pythium polare bunya-like covirus was first discovered in mushrooms (Hollings, 1962), many RNA virus 1 (PpBRV1) from G. -
Saprolegnia Species in Norwegian Salmon Hatcheries: Field Survey Identifies S
Vol. 114: 189–198, 2015 DISEASES OF AQUATIC ORGANISMS Published June 3 doi: 10.3354/dao02863 Dis Aquat Org OPENPEN ACCESSCCESS Saprolegnia species in Norwegian salmon hatcheries: field survey identifies S. diclina sub-clade IIIB as the dominating taxon E. Thoen1, T. Vrålstad1, E. Rolén1, R. Kristensen1, Ø. Evensen2, I. Skaar1,* 1Norwegian Veterinary Institute, PO Box 750 Sentrum, 0106 Oslo, Norway 2Norwegian University of Life Sciences, PO Box 8146 Dep., 0033 Oslo, Norway ABSTRACT: Saprolegnia isolates within the recognized clades encompassing the taxa S. parasit- ica and S. diclina act as opportunist and aggressive pathogens to both fish and their eggs. They are responsible for significant economic losses in aquaculture, particularly in salmonid hatcheries. However, the identity, distribution and pathogenic significance of involved species often remain unexplored. In this study, 89 Saprolegnia isolates were recovered from water, eggs and salmon tis- sue samples that originated from salmon (Salmo salar) hatcheries along the coast of Norway. The cultures were characterized morphologically and molecularly in order to provide an overview of the species composition of Saprolegnia spp. present in Norwegian salmon hatcheries. We demon- strate that S. diclina clearly dominated and contributed to 79% of the recovered isolates. Parsi- mony analyses of the nuclear ribosomal internal transcribed spacer (ITS) region split these isolates into 2 strongly supported sub-clades, S. diclina sub-clade IIIA and IIIB, where sub-clade IIIB accounted for 66% of all isolates. A minor portion of the isolates constituted other taxa that were either conspecific or showed strong affinity to S. parasitica, S. ferax, S. hypogyna and Scoliolegnia asterophora. -
The Taxonomy and Biology of Phytophthora and Pythium
Journal of Bacteriology & Mycology: Open Access Review Article Open Access The taxonomy and biology of Phytophthora and Pythium Abstract Volume 6 Issue 1 - 2018 The genera Phytophthora and Pythium include many economically important species Hon H Ho which have been placed in Kingdom Chromista or Kingdom Straminipila, distinct from Department of Biology, State University of New York, USA Kingdom Fungi. Their taxonomic problems, basic biology and economic importance have been reviewed. Morphologically, both genera are very similar in having coenocytic, hyaline Correspondence: Hon H Ho, Professor of Biology, State and freely branching mycelia, oogonia with usually single oospores but the definitive University of New York, New Paltz, NY 12561, USA, differentiation between them lies in the mode of zoospore differentiation and discharge. Email [email protected] In Phytophthora, the zoospores are differentiated within the sporangium proper and when mature, released in an evanescent vesicle at the sporangial apex, whereas in Pythium, the Received: January 23, 2018 | Published: February 12, 2018 protoplast of a sporangium is transferred usually through an exit tube to a thin vesicle outside the sporangium where zoospores are differentiated and released upon the rupture of the vesicle. Many species of Phytophthora are destructive pathogens of especially dicotyledonous woody trees, shrubs and herbaceous plants whereas Pythium species attacked primarily monocotyledonous herbaceous plants, whereas some cause diseases in fishes, red algae and mammals including humans. However, several mycoparasitic and entomopathogenic species of Pythium have been utilized respectively, to successfully control other plant pathogenic fungi and harmful insects including mosquitoes while the others utilized to produce valuable chemicals for pharmacy and food industry. -
Ajb205620.Pdf
AMERICAN JOURNAL OF BOTANY VOL. VIII MAY, 1921 NO·5 ISOACHLYA, A NEW GENUS OF THE SAPROLEGNIACEAEI C. H. KAUFFMAN (Received for publication December 29, 1920) Isoachlya Kauffman gen. nov. Hyphae rather stout or slender. Zoo sporangia formed from their tips, oval, pyriform, ventricose-clavate, the later ones (secondary) arising either by cymose or pseudo-cymose arrange ment as in Achlya, or by internal proliferation as in Saprolegnia, both modes occuring earlier or later in the development of one and the same species, or frequently on the same main hypha. Zoospores diplanetic, as in Saproleg nia, escaping and swarming separately, and after encystment swarming the second time before the formation of a germ tube. Oogonia terminal or toru lose, occasionally intercalary. Oospores with centric contents, the spores filling the oogonium incompletely. Antheridia present or few to none. The genus is characterized and distinguished, in the main, by the presence of the cymose or Achlya mode of formation of secondary sporangia, coupled with diplanetic zoospores. The following species naturally fall within its boundaries: I. Isoachlya toruloides Kauffman and Coker sp. nov. 2. Isoachlya paradoxa (Coker) comb. nov. Achlya paradoxa Coker. Mycologia 6: 285. 1914. 3. Isoachlya monilifera (de Bary) comb. nov. Saprolegnia monilifera de Bary. Bot. Zeit. 16: 629. 1888. Isoachlya toruloides Kauffman and Coker sp. nov. Hyphae rather slender and short, 18-20" in diameter, later ones fre quently smaller, straight and scarcely branched. Zoosporangia oval, pyriform, clavate-pyriform, more rarely elongated-pyriform, with a more or less distinct papilla; secondary sporangia, during the early and vigorous develdpment, all cymosely arranged by successive basipetal formation, sometimes from the walls of earlier ones, later secondary sporangial initials appearing by internal proliferation as in Saprolegnia; zoospores diplanetic, capable of escaping and swarming separately, encysting after coming to 1 After this paper was in the hands of the editor, a letter from Prof. -
Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia Parasitica
Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters. Citation Jiang, R. H. Y., I. de Bruijn, B. J. Haas, R. Belmonte, L. Löbach, J. Christie, G. van den Ackerveken, et al. 2013. “Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica.” PLoS Genetics 9 (6): e1003272. doi:10.1371/journal.pgen.1003272. http://dx.doi.org/10.1371/journal.pgen.1003272. Published Version doi:10.1371/journal.pgen.1003272 Accessed February 19, 2015 1:54:23 PM EST Citable Link http://nrs.harvard.edu/urn-3:HUL.InstRepos:11708611 Terms of Use This article was downloaded from Harvard University's DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http://nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA (Article begins on next page) Distinctive Expansion of Potential Virulence Genes in the Genome of the Oomycete Fish Pathogen Saprolegnia parasitica Rays H. Y. Jiang1., Irene de Bruijn2¤a., Brian J. Haas1., Rodrigo Belmonte2,3,LarsLo¨ bach2, James Christie2,3, Guido van den Ackerveken4, Arnaud Bottin5, Vincent Bulone6, Sara M. Dı´az-Moreno6, Bernard Dumas5, Lin Fan1, Elodie Gaulin5, Francine Govers7,8, Laura J. Grenville-Briggs2,6, Neil R. Horner2, Joshua Z. Levin1, Marco Mammella9, Harold J. G. Meijer7, Paul Morris10, Chad Nusbaum1, Stan Oome4, Andrew J. Phillips2, David van Rooyen2, Elzbieta Rzeszutek6, Marcia Saraiva2, Chris J. -
<I>Sirolpidium Bryopsidis</I>, a Parasite of Green Algae, Is Probably
VOLUME 7 JUNE 2021 Fungal Systematics and Evolution PAGES 223–231 doi.org/10.3114/fuse.2021.07.11 Sirolpidium bryopsidis, a parasite of green algae, is probably conspecific with Pontisma lagenidioides, a parasite of red algae A.T. Buaya1, B. Scholz2, M. Thines1,3,4* 1Senckenberg Biodiversity and Climate Research Center, Senckenberganlage 25, D-60325 Frankfurt am Main, Germany 2BioPol ehf, Marine Biotechnology, Einbúastig 2, 545 Skagaströnd, Iceland 3Goethe-University Frankfurt am Main, Department of Biological Sciences, Institute of Ecology, Evolution and Diversity, Max-von-Laue Str. 13, D-60438 Frankfurt am Main, Germany 4LOEWE Centre for Translational Biodiversity Genomics, Georg-Voigt-Str. 14-16, D-60325 Frankfurt am Main, Germany *Corresponding author: [email protected] Key words: Abstract: The genus Sirolpidium (Sirolpidiaceae) of the Oomycota includes several species of holocarpic obligate aquatic chlorophyte algae parasites. These organisms are widely occurring in marine and freshwater habitats, mostly infecting filamentous green early-diverging algae. Presently, all species are only known from their morphology and descriptive life cycle traits. None of the seven new taxa species classified in Sirolpidium, including the type species, S. bryopsidis, has been rediscovered and studied for their Oomycota molecular phylogeny, so far. Originally, the genus was established to accommodate all parasites of filamentous marine Petersenia green algae. In the past few decades, however, Sirolpidium has undergone multiple taxonomic revisions and several species phylogeny parasitic in other host groups were added to the genus. While the phylogeny of the marine rhodophyte- and phaeophyte- Pontismataceae infecting genera Pontisma and Eurychasma, respectively, has only been resolved recently, the taxonomic placement Sirolpidiaceae of the chlorophyte-infecting genus Sirolpidium remained unresolved. -
Differentiation and Pathogenicity Within the Saprolegniaceae
Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 680 _____________________________ _____________________________ Differentiation and Pathogenicity within the Saprolegniaceae Studies on Physiology and Gene Expression Patterns in Saprolegnia parasitica and Aphanomyces astaci BY GUNNAR ANDERSSON ACTA UNIVERSITATIS UPSALIENSIS UPPSALA 2001 Dissertation for the Degree of Doctor of Philosophy in Physiological Mycology presented at Uppsala University in 2002 Abstract Andersson, M. G. 2001. Differentiation and Pathogenicity within the Saprolegniaceae. Studies on Physiology and Gene Expression Patterns in Saprolegnia parasitica and Aphanomyces astaci. Acta Universitatis Upsaliensis. Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 680, 41 pp. Uppsala. ISBN 91-554-5203-5. Saprolegnia parasitica and Aphanomyces astaci are parasitic water moulds belonging to the Oomycetes. Despite their importance as parasites they are very little studied at the molecular level and the work described in this thesis was aimed at increasing the molecular knowledge of these organisms by cloning and characterising genes of potential importance for reproduction and pathogenicity. Stage-specific transcripts from Saprolegnia parasitica were isolated by differential display RT-PCR. One of the markers, puf1 encodes a putative mRNA binding protein which may be involved in post-transcriptional regulation of gene expression. S. parasitica puf1 is expressed exclusively in spore cysts that have not been determined for germination or repeated zoospore emergence indicating that the cyst stage has two phases, of about equal duration, which are physiologically and transcriptionally distinct. A similar expression pattern is observed in Aphanomyces spp. with different regulation of spore development and in the transcript is detected in both primary and secondary cysts.