Continuous Probing of Cold Complex Molecules with Infrared Frequency Comb Spectroscopy Ben Spaun1, P

Total Page:16

File Type:pdf, Size:1020Kb

Continuous Probing of Cold Complex Molecules with Infrared Frequency Comb Spectroscopy Ben Spaun1, P LETTER doi:10.1038/nature17440 Continuous probing of cold complex molecules with infrared frequency comb spectroscopy Ben Spaun1, P. Bryan Changala1, David Patterson2, Bryce J. Bjork1, Oliver H. Heckl1, John M. Doyle2 & Jun Ye1 For more than half a century, high-resolution infrared spectroscopy Fourier transform microwave spectroscopy has advanced the field of has played a crucial role in probing molecular structure and rotational spectroscopy16,17, but spectral congestion has limited appli- dynamics. Such studies have so far been largely restricted to cation to relatively simple molecules with less than 10 atoms4,5. This relatively small and simple systems, because at room temperature limitation is addressed by combining CE-DFCS with a buffer gas cooling even molecules of modest size already occupy many millions of method that can rotationally and translationally cool large molecules to 18,19 rotational/vibrational states, yielding highly congested spectra ~10 K and below . The simulated nitromethane (CH3NO2) absorp- that are difficult to assign. Targeting more complex molecules tion spectra in Fig. 1 illustrate the significant gains in resolving power requires methods that can record broadband infrared spectra (that and sensitivity associated with cooling from 300 K to 10 K: molecules is, spanning multiple vibrational bands) with both high resolution have a five-times narrower Doppler-broadened linewidth and occupy and high sensitivity. However, infrared spectroscopic techniques many fewer and lower rovibrational energy levels, giving a drastically have hitherto been limited either by narrow bandwidth and long simplified absorption spectrum (compared to the unresolvable room acquisition time1, or by low sensitivity and resolution2. Cavity- temperature spectrum20) with clearly distinguishable absorption lines enhanced direct frequency comb spectroscopy (CE-DFCS) combines with enhanced peak amplitudes. Supersonic expansion jets21,22 pro- the inherent broad bandwidth and high resolution of an optical vide another means for cooling molecules, but buffer gas cells do not frequency comb with the high detection sensitivity provided by a require high pumping speeds and the associated elaborate pumping high-finesse enhancement cavity3,4, but it still suffers from spectral congestion5. Here we show that this problem can be overcome by 6 a 1 b using buffer gas cooling to produce continuous, cold samples of T = 300 K 0.8 molecules that are then subjected to CE-DFCS. This integration 0.6 0.5 allows us to acquire a rotationally resolved direct absorption FWHM = 33.3(10) MHz 0.4 T = 16(1) K spectrum in the C–H stretching region of nitromethane, a model 0.4 trans 0.2 system that challenges our understanding of large-amplitude 0.3 vibrational motion7–9. We have also used this technique on several 1 T = 150 K large organic molecules that are of fundamental spectroscopic and 0.8 0.2 astrochemical relevance, including naphthalene10, adamantane11 0.6 −ln(Transmission) 0.1 and hexamethylenetetramine12. These findings establish the value of 0.4 0 our approach for studying much larger and more complex molecules 0.2 −100 0 100 than have been probed so far, enabling complex molecules and their 10 T = 50 K Offset frequency (MHz) kinetics to be studied with orders-of-magnitude improvements in 8 efficiency, spectral resolution and specificity. 6 c 4 Absorption (a.u.) The massively parallel CE-DFCS technique is virtually equivalent to 4 3.5 Trot = 10.7(12) K thousands of simultaneous, highly sensitive, absorption measurements 2 ) with thousands of narrow linewidth lasers. The broadband (hundreds 3 of nanometres) spectrum of a frequency comb consists of tens of thou- 500 T = 8 K 2.5 sands of discrete, narrow frequency modes equally separated by the 400 300 comb repetition rate, frep, with a common carrier envelope frequency 2 200 ln(Population offset, fceo. Both frep and fceo can be precisely stabilized, allowing for 1.5 complete control of each of the tens of thousands of separate frequency 100 13,14 1 modes in the comb . By matching evenly spaced comb lines with 2,954.4 2,954.45 2,954.5 2,954.55 0 5 10 15 resonant frequency modes of a high-finesse optical cavity filled with a Frequency (cm−1) E (cm−1) molecular species, the absorption path length and overall absorption i sensitivity of the comb can be enhanced by four orders of magnitude, Figure 1 | Buffer gas cooling of nitromethane. a, A simulated portion of the to kilometre length scales3. A Fourier-transform spectrometer (FTS) nitromethane spectrum as a function of temperature. Individual absorption is used to measure the absorption spectrum, and only needs a resolu- lines are much more resolvable at low temperatures, as Doppler broadening tion better than the cavity free spectral range (FSR: 100–1,000 MHz) in decreases and the molecular population moves to the lowest available energy levels. b, Observed Doppler-broadened absorption profile of nitromethane, order to resolve a single comb line. Thus, a standard FTS can achieve showing a translational temperature (Ttrans) of ~16 K. c, Measured an instrument linewidth limited only by the stability of the comb nitromethane rotational population as a function of energy, Ei, revealing a ~ itself, in our case, 50 kHz (ref. 15). The highly multiplexed nature rotational temperature of Trot ≈ 11 K (see Methods for more details). The of CE-DFCS has the potential to advance the field of infrared rovibra- units cm−1 correspond to wavenumber, and are used to represent frequency tional spectroscopy just as the recent development of chirped-pulsed (a) and energy (c). 1JILA, National Institute of Standards and Technology and University of Colorado, Department of Physics, University of Colorado, Boulder, Colorado 80309, USA. 2Department of Physics, Harvard University, Cambridge, Massachusetts 02138, USA. 26 MAY 2016 | VOL 533 | NATURE | 517 © 2016 Macmillan Publishers Limited. All rights reserved RESEARCH LETTER in the buffer gas cell. To read out the fractional absorption of each comb mode, we use a custom-built (doubled-passed) fast-scanning HR mirror + – – FTS with a scanning arm (0.7 m) sufficiently long for single comb mode + + – – 4,5 + To FTS Comb PBS resolution . ∆ν light – The molecular absorption linewidth ( ), dominated by 15–30 MHz + + – + – + – Doppler broadening (Fig. 1b), is significantly smaller than the To PD H frequency spacing between comb modes transmitted through the lock Grating enhancement cavity (272 MHz). Thus, for given values of frep and fceo, the frequency comb is resonant with only a fraction of the molecular Molecule inlet He inlet absorption features that lie within the comb bandwidth. To ensure that Figure 2 | A schematic of the combined CE-DFCS and buffer gas cooling absorption lines are not missed by the discrete frequency comb modes, apparatus. Light from a mid-infrared frequency comb is coupled into a we step the comb repetition rate by ∆frep after averaging four FTS data high-finesse enhancement cavity formed by two high reflectivity (HR) acquisitions (~30 s total). This shifts the frequency of each comb mode 6 mirrors surrounding a 5–10 K buffer gas cell filled with cold molecules. by n∆frep, where n ≈ 10 is the comb mode number. We choose ∆frep Warm molecules enter through the side of the cell and are quickly cooled such that n∆frep ≤ ∆ν/5, allowing us to measure the Doppler width, to ~10 K through multiple collisions with the helium buffer gas, which and therefore the translational temperature, of molecules in the buffer enters the cell from a separate inlet. Comb light reflected from the cavity gas cell in real time. The complete spectrum containing all absorption is routed by a polarizing beam splitter (PBS) and dispersed by a grating, lines is then generated by interleaving multiple FTS spectra, each and an ~10 nm segment of the comb spectrum is used to generate a Pound–Drever–Hall (PDH) error signal to lock the comb to the cavity. corresponding to a different value of frep. The PDH lock allows for continuous transmission of thousands of We demonstrate the simultaneous advantages in resolution, sensi- frequency comb modes spanning ~100 nm (refs 4, 30). Transmitted comb tivity and bandwidth in this cold molecule–comb spectroscopy system light is coupled into a Fourier-transform spectrometer (FTS), which by gathering rotationally resolved spectra in the C–H stretching region measures the fractional absorption of each transmitted comb line. (~3.3 μm) of nitromethane (CH3NO2, a model system for understanding intramolecular vibrational coupling and large amplitude internal 7–9 infrastructure while allowing us to acquire higher-resolution molecular motion ), adamantane (C10H16) and hexamethylenetetramine infrared spectra spanning multiple vibrational bands in the mid-infra- (C6N4H12, HMT) for the first time. As shown in Fig. 3a, we clearly resolve red with comparable absorption sensitivity. over 1,000 nitromethane absorption lines spanning multiple vibrational Figure 2 shows the important components of the combined bands, including the entire fundamental C–H stretching region, with CE-DFCS and buffer gas cooling apparatus. A mid-infrared frequency an excellent signal-to-noise ratio for less than three hours of data acqui- comb, tunable from 2.8 μm to 4.8 μm, is produced in an optical para- sition. The comb bandwidth is sufficiently large to simultaneously 4,15 metric oscillator (OPO) pumped by a 1 μm ytterbium fibre comb . gather spectra containing the ν3 + ν6 (symmetric + antisymmetric) Both frep ≈ 136 MHz and fceo of the mid-infrared comb are referenced to N–O stretching combination band and the ν1 symmetric C–H stretching a microwave caesium clock. The OPO comb output is then coupled into band (a small section of the ν1 band is shown magnified in Fig. 3b). The a high finesse (F ≈ 6,000) optical cavity surrounding a 5–10 K buffer comb was also tuned to a higher centre frequency to acquire the portion gas cell.
Recommended publications
  • SAFETY DATA SHEET Adamantane According to Regulation (EC) No 1907/2006, Annex II, As Amended
    Revision date: 21/11/2017 Revision: 1 SAFETY DATA SHEET Adamantane According to Regulation (EC) No 1907/2006, Annex II, as amended. Commission Regulation (EU) No 2015/830 of 28 May 2015. SECTION 1: Identification of the substance/mixture and of the company/undertaking 1.1. Product identifier Product name Adamantane Product number FA01417 CAS number 281-23-2 EC number 206-001-4 1.2. Relevant identified uses of the substance or mixture and uses advised against Identified uses Laboratory reagent. Manufacture of substances. Research and development. 1.3. Details of the supplier of the safety data sheet Supplier Carbosynth Ltd 8&9 Old Station Business Park Compton Berkshire RG20 6NE UK +44 1635 578444 +44 1635 579444 [email protected] 1.4. Emergency telephone number Emergency telephone +44 7887 998634 SECTION 2: Hazards identification 2.1. Classification of the substance or mixture Classification (EC 1272/2008) Physical hazards Not Classified Health hazards Skin Irrit. 2 - H315 Eye Irrit. 2 - H319 Environmental hazards Aquatic Acute 1 - H400 Aquatic Chronic 1 - H410 2.2. Label elements EC number 206-001-4 Pictogram Signal word Warning 1/9 Revision date: 21/11/2017 Revision: 1 Adamantane Hazard statements H315 Causes skin irritation. H319 Causes serious eye irritation. H410 Very toxic to aquatic life with long lasting effects. Precautionary statements P264 Wash contaminated skin thoroughly after handling. P280 Wear protective gloves/ protective clothing/ eye protection/ face protection. P302+P352 IF ON SKIN: Wash with plenty of water. P305+P351+P338 IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to do.
    [Show full text]
  • Minutes of the IUPAC Chemical Nomenclature and Structure Representation Division (VIII) Committee Meeting Boston, MA, USA, August 18, 2002
    Minutes of the IUPAC Chemical Nomenclature and Structure Representation Division (VIII) Committee Meeting Boston, MA, USA, August 18, 2002 Members Present: Dr Stephen Heller, Prof Herbert Kaesz, Prof Dr Alexander Lawson, Prof G. Jeffrey Leigh, Dr Alan McNaught (President), Dr. Gerard Moss, Prof Bruce Novak, Dr Warren Powell (Secretary), Dr William Town, Dr Antony Williams Members Absent: Dr. Michael Dennis, Prof Michael Hess National representatives Present: Prof Roberto de Barros Faria (Brazil) The second meeting of the Division Committee of the IUPAC Division of Chemical Nomenclature and Structure Representation held in the Great Republic Room of the Westin Hotel in Boston, Massachusetts, USA was convened by President Alan McNaught at 9:00 a.m. on Sunday, August 18, 2002. 1.0 President McNaught welcomed the members to this meeting in Boston and offered a special welcome to the National Representative from Brazil, Prof Roberto de Barros Faria. He also noted that Dr Michael Dennis and Prof Michael Hess were unable to be with us. Each of the attendees introduced himself and provided a brief bit of background information. Housekeeping details regarding breaks and lunch were announced and an invitation to a reception from the U. S. National Committee for IUPAC on Tuesday, August 20 was noted. 2.0 The agenda as circulated was approved with the addition of a report from Dr Moss on the activity on his website. 3.0 The minutes of the Division Committee Meeting in Cambridge, UK, January 25, 2002 as posted on the Webboard (http://www.rsc.org/IUPAC8/attachments/MinutesDivCommJan2002.rtf and http://www.rsc.org/IUPAC8/attachments/MinutesDivCommJan2002.pdf) were approved with the following corrections: 3.1 The name Dr Gerard Moss should be added to the members present listing.
    [Show full text]
  • Mass Spectrometric Research of Hydrogenated Molecules of Carbon As Products of Pyrolysis of Benzene and Pyridine Vapours
    Chemical and Materials Engineering 1(4): 122-131, 2013 http://www.hrpub.org DOI: 10.13189/cme.2013.010404 Mass Spectrometric Research of Hydrogenated Molecules of Carbon as Products of Pyrolysis of Benzene and Pyridine Vapours Alexey Kharlamov1, Marina Bondarenko1,*, Ganna Kharlamova2 1Frantsevich Institute for Problems of Materials Science of NASU, Krzhyzhanovsky St. 3, 03680 Kiev, Ukraine 2Taras Shevchenko National University of Kiev, Volodymyrs'ka St. 64, 01601 Kiev, Ukraine *Corresponding Author: [email protected] Copyright © 2013 Horizon Research Publishing All rights reserved. Abstract Hydrogenated carbon molecules are to speak about creation on the basis of system of convertible synthesized by a method which essentially is distinct from reactions already known methods of preparation of fulleranes as this C60+30H2 C60H60 (1) method a preliminary stage of synthesis of carbon molecules accumulator of hydrogen with so huge (7.7mass. %) contents is excluded completely. Fulleranes and quasi-fulleranes as ⇌ of hydrogen. Though here it is necessary to note, that in nanodimentional particles were in common deposited by dodecahedrane С Н , which was synthesized by Paquette ethanol from benzene-xylene extracts from products of 20 20 [4] three years prior to opening of fullerene С (and 8 years pyrolysis of vapours of benzene and pyridine. The 60 prior to obtaining of first fullerane C H ), the ratio Н/C is dehydrogenation of the synthesized samples of fulleranes 60 36 the same (1/12) as in fullerene С Н . However of so and quasi-fulleranes is started at 30-50 °C and the evacuation 60 60 steadfast interest of the researchers this controllable of hydrogen proceeds up to 700 °C.
    [Show full text]
  • Functionalized Aromatics Aligned with the Three Cartesian Axes: Extension of Centropolyindane Chemistry*
    Pure Appl. Chem., Vol. 78, No. 4, pp. 749–775, 2006. doi:10.1351/pac200678040749 © 2006 IUPAC Functionalized aromatics aligned with the three Cartesian axes: Extension of centropolyindane chemistry* Dietmar Kuck‡ Fakultät für Chemie, Universität Bielefeld, Universitätsstraße 25, D-33615 Bielefeld, Germany Abstract: The unique geometrical features and structural potential of the centropolyindanes, a complete family of novel, 3D polycyclic aromatic hydrocarbons, are discussed with respect to the inherent orthogonality of their arene units. Thus, the largest member of the family, centrohexaindane, a topologically nonplanar hydrocarbon, is presented as a “Cartesian hexa- benzene”, because each of its six benzene units is stretched into one of the six directions of the Cartesian space. This feature is discussed on the basis of the X-ray crystal structures of centrohexaindane and two lower members of the centropolyindane family, viz. the parent tribenzotriquinacenes. Recent progress in multiple functionalization and extension of the in- dane wings of selected centropolyindanes is reported, including several highly efficient six- and eight-fold C–C cross-coupling reactions. Some particular centropolyindane derivatives are presented, such as the first twelve-fold functionalized centrohexaindane and a tribenzo- triquinacene bearing three mutually orthogonal phenanthroline groupings at its molecular pe- riphery. Challenges to further extend the arene peripheries of the tribenzotriquinacenes and fenestrindanes to give, eventually, graphite cuttings bearing a central bowl- or saddle-shaped center are outlined, as is the hypothetical generation of a “giant” nanocube consisting of eight covalently bound tribenzotriquinacene units. Along these lines, our recent discovery of a re- lated, solid-state supramolecular cube, containing eight molecules of a particular tri- bromotrinitrotribenzotriquinacene of the same absolute configuration, is presented for the first time.
    [Show full text]
  • One-Stage Catalytic Oxidation of Adamantane to Tri-, Tetra-, and Penta-Ols
    catalysts Article One-Stage Catalytic Oxidation of Adamantane to Tri-, Tetra-, and Penta-Ols Igor Yu. Shchapin 1,2,3,*, Dzhamalutdin N. Ramazanov 4, Andrey I. Nekhaev 4, Roman S. Borisov 4, Evgeny A. Buravlev 5 and Anton L. Maximov 4 1 Department of Chemistry, I.M. Sechenov First Moscow State Medical University, 119991 Moscow, Russia 2 Department of High Energy Chemistry and Radioecology, D.I. Mendeleev University of Chemical Technology of Russia, 125047 Moscow, Russia 3 Branch of Joint-Stock Company “United Rocket and Space Corporation”—“Scientific Research Institute of Space Device Engineering”, 111024 Moscow, Russia 4 A.V. Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, 119991 Moscow, Russia; [email protected] (D.N.R.); [email protected] (A.I.N.); [email protected] (R.S.B.); [email protected] (A.L.M.) 5 Department of Physics and Mathematics, N.I. Pirogov Russian National Research Medical University, 117997 Moscow, Russia; [email protected] * Correspondence: [email protected] Abstract: Tertiary tetraols of adamantane (C10H16, Tricyclo[3.3.1.1(3,7)]decan) have been widely used for the synthesis of highly symmetric compounds with unique physical and chemical properties. The methods for one-stage simultaneously selective, deep, and cheap oxidation of adamantane to tetraols of different structures have not yet been developed. In this research, chemically simple, cheap, and environmentally friendly reagents are used and that is the first step in this direction. The conditions, under which the impact of a hydrogen peroxide water solution on adamantane Citation: Shchapin, I.Yu.; dissolved in acetonitrile results in full conversion of adamantane and formation of a total 72% Ramazanov, D.N.; Nekhaev, A.I.; mixture of its tri-, tetra-, and penta-oxygenated products, predominantly poliols, have been found.
    [Show full text]
  • The Synthesis of Diamond Films on Adamantane-Coated Si Substrate At
    Chemical Engineering Journal 158 (2010) 641–645 Contents lists available at ScienceDirect Chemical Engineering Journal journal homepage: www.elsevier.com/locate/cej Short communication The synthesis of diamond films on adamantane-coated Si substrate at low temperature Rajanish N. Tiwari ∗, Jitendra N. Tiwari, Li Chang ∗ Department of Materials Science and Engineering, National Chiao Tung University, Hsinchu, Taiwan, ROC article info abstract Article history: Diamond films have been synthesized on the adamantane-coated Si (1 0 0) substrate by microwave Received 13 November 2009 plasma chemical vapor deposition from a gaseous mixture of methane and hydrogen gases with a Received in revised form 8 January 2010 growth rate of ∼6.7 nm/min. The substrate temperature was ∼475 ◦C during diamond deposition. The Accepted 11 January 2010 films obtained have good crystallinity that is characterized by scanning electron microscopy and Raman spectrometry. X-ray photoelectron spectroscopy analysis has confirmed that diamond nucleation and Keywords: growth are on SiC rather than clean Si. The possible mechanism of high rate growth diamond films has Diamond been demonstrated. Adamantane MPCVD © 2010 Elsevier B.V. All rights reserved. 1. Introduction hedral and C–C single bond has a length of 1.54 Å. Partial collapse of adamantane molecules is known to yield carbon clusters (CnHx) Recently, the synthesis of diamond at low temperature has where n = 3, 5, 6, 7, 8 and 9 of significant abundance [16].Tothe attracted much attention of materials scientists, owing to its best of our knowledge, this is the first report showing the synthesis wide range of applications in optics, microelectronics, tribological, of diamond films on the adamantane-coated Si (1 0 0) substrate at thermal management, biomedical, DNA-based sensor, and manu- low temperature.
    [Show full text]
  • Safety Data Sheets
    SAFETY DATA SHEETS According to Globally Harmonized System of Classification and Labelling of Chemicals (GHS) - Sixth revised edition Version: 1.0 Creation Date: Feb. 6, 2018 Revision Date: Feb. 6, 2018 1. Identification 1.1 GHS Product identifier Product name Adamantane 1.2 Other means of identification Product number A506396 Other names Adamantane 1.3 Recommended use of the chemical and restrictions on use Identified uses Used for research and development only. Uses advised against no data available 1.4 Supplier's details Company Sangon Biotech (Shanghai) Co., Ltd. Address 698 Xiangmin Road, Songjiang, Shanghai 201611, China Telephone +86-400-821-0268 / +86-800-820-1016 Fax +86-400-821-0268 to 9 1.5 Emergency phone number Emergency phone +86-21-57072055 number Service hours Monday to Friday, 9am-5pm (Standard time zone: UTC/GMT +8 hours). 2. Hazard identification 2.1 Classification of the substance or mixture Acute toxicity - Oral, Category 4 2.2 GHS label elements, including precautionary statements Pictogram(s) Signal word Warning Hazard statement(s) H302 Harmful if swallowed Adamantane Page 1 of 8 Precautionary statement(s) Prevention P264 Wash ... thoroughly after handling. P270 Do not eat, drink or smoke when using this product. Response P301+P312 IF SWALLOWED: Call a POISON CENTER/doctor/…if you feel unwell. P330 Rinse mouth. Storage none Disposal P501 Dispose of contents/container to ... 2.3 Other hazards which do not result in classification no data available 3. Composition/information on ingredients 3.1 Substances Common names and CAS EC Chemical name Concentration synonyms number number 206-001- Tricyclo[3.3.1.13,7]decane Adamantane 281-23-2 ≥99% 4 4.
    [Show full text]
  • The Synthesis of Hindered Aliphatic Ketones for the Future Production of Spiro [4.5] Decane Sesquiterpenes
    W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 1986 The Synthesis of Hindered Aliphatic Ketones for the Future Production of Spiro [4.5] Decane Sesquiterpenes Stephen Lee Hodges College of William & Mary - Arts & Sciences Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Organic Chemistry Commons Recommended Citation Hodges, Stephen Lee, "The Synthesis of Hindered Aliphatic Ketones for the Future Production of Spiro [4.5] Decane Sesquiterpenes" (1986). Dissertations, Theses, and Masters Projects. Paper 1539625343. https://dx.doi.org/doi:10.21220/s2-jkzs-gq54 This Thesis is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. THE SYNTHESIS OF HINDERED ALIPHATIC KETONES FOR THE FUTURE PRODUCTION OF SPIRO[4.5] DECANE SESQUITERPENES A Thesis Presented to The Faculty of the Department of Chemistry The College of William and Mary in Virginia In Partial Fulfillment Of the Requirements for the Degree of Master of Arts t>y Stephen Lee Hodges 1986 APPROVAL SHEET This thesis is submitted in partial fulfillment of the requirements for the degree of Master of Arts Author Approved, February 1986 David W. Thompson, Ph.D \\ j j D Trevor B. Hill, Ph.D. andolph A. Coleman, Ph.D. TABLE OF CONTENTS Page ABSTRACT................... vi INTRODUCTION........................................ 2 DISCUSSION............................................. 21 EXPERIMENTAL...........................................31 Spiro[4.5]dec-6-ene-lf 8-trione . .......... 31 2 -Isopropyl-l, 3-cyclopentanedione..............
    [Show full text]
  • Synthesis and Biological Evaluation of 1-(2-(Adamantane-1-Yl)-1H-Indol-5-Yl)-3-Substituted Urea/Thiourea Derivatives As Anticanc
    RSC Advances View Article Online PAPER View Journal | View Issue Synthesis and biological evaluation of 1-(2- (adamantane-1-yl)-1H-indol-5-yl)-3-substituted Cite this: RSC Adv.,2017,7, 51640 urea/thiourea derivatives as anticancer agents† Hongyu Hu,‡ab Chunrong Lin,‡a Mingtao Ao,‡a Yufen Ji,a Bowen Tang,a Xiaoxiao Zhou,a Meijuan Fang, *a Jinzhang Zeng*a and Zhen Wu*a The indole ring, adamantane, and urea groups are important components of bioactive molecules. The orphan nuclear receptor Nur77 as a unique transcription factor encoded by an immediate early gene is a potential therapeutic target for cancer treatment. We synthesized a series of 1-(2-(adamantane-1-yl)- 1H-indol-5-yl)-3-substituted urea/thiourea derivatives and identified which of these potential anticancer candidates could modulate the expression and activity of Nur77. The synthesized compounds were initially evaluated for their anti-proliferative activity against H460 lung cancer cells, HepG2 liver cancer cells, and MCF-7 breast cancer cells. Major compounds were found to be active against these tested Creative Commons Attribution-NonCommercial 3.0 Unported Licence. cancer cell lines. The compounds with IC50 values down to 20 mM exhibited selective cytotoxicity effects on the human lung cancer cell line (H460) and the normal lung cell line (MCR-5). Compounds 7n, 7s, and 7w induced Nur77-expression in a time- and dose-dependent manner in H460 cells. Compounds 7n and 7s strongly induced Parp cleavage in H460 cells, but 7w resulted in a slight induction of Received 24th July 2017 apoptosis. The apoptotic effect of 7s was largely inhibited when the Nur77 was knocked down by shRNA.
    [Show full text]
  • WO 2016/074683 Al 19 May 2016 (19.05.2016) W P O P C T
    (12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2016/074683 Al 19 May 2016 (19.05.2016) W P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every C12N 15/10 (2006.01) kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, (21) International Application Number: BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, PCT/DK20 15/050343 DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (22) International Filing Date: HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, 11 November 2015 ( 11. 1 1.2015) KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, (25) Filing Language: English PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, (26) Publication Language: English SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. (30) Priority Data: PA 2014 00655 11 November 2014 ( 11. 1 1.2014) DK (84) Designated States (unless otherwise indicated, for every 62/077,933 11 November 2014 ( 11. 11.2014) US kind of regional protection available): ARIPO (BW, GH, 62/202,3 18 7 August 2015 (07.08.2015) US GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, (71) Applicant: LUNDORF PEDERSEN MATERIALS APS TJ, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, [DK/DK]; Nordvej 16 B, Himmelev, DK-4000 Roskilde DK, EE, ES, FI, FR, GB, GR, HR, HU, IE, IS, IT, LT, LU, (DK).
    [Show full text]
  • Self-Assembly of Nanoscopic Coordination Cages of D3h Symmetry Christopher J
    Self-assembly of nanoscopic coordination cages of D3h symmetry Christopher J. Kuehl*, Yury K. Kryschenko*, Ukkirampandian Radhakrishnan*, S. Russell Seidel*, Songping D. Huang†, and Peter J. Stang*‡ *Department of Chemistry, University of Utah, Salt Lake City, UT 84112; and †Department of Chemistry, Kent State University, Kent, OH 44242 Contributed by Peter J. Stang, October 11, 2001 A family of nanoscale-sized supramolecular cage compounds with a tures of variable size and functionality, in high yield, and without trigonal prismatic framework was prepared by means of spontaneous the use of templates. Specifically, the modular self-assembly of self-assembly from the combination of a predesigned molecular ‘‘clip’’ a new family of metalla-bicyclic structures (3a–3c), directed by with tritopic pyridyl subunits. As confirmed by x-ray crystallography, a molecular ‘‘clip’’ (1) as a preconstructed shape-defining unit, ,the smallest structure of the reported series is Ϸ1 ؋ 2nmand is described. The structure and properties of these nanoscopic possesses a nitrate anion incarcerated inside its molecular cavity. The macrocyclic species have been studied by electrospray ioniza- largest structure has dimensions of Ϸ 1 ؋ 4 nm. tion (ESI)-mass spectrometry, multinuclear NMR, and x-ray crystallography. he formation of discrete supramolecular entities driven and Experimental Section Theld together by metal coordination is an intense new area of investigation at the forefront of supramolecular chemistry General Methods. Building unit 2a (47) was synthesized by a (1–10). Because self-assembly is guided by the chemical infor- published method and 2b and 2c were prepared in an analogous mation encoded into the molecular subunits, diverse structures manner.
    [Show full text]
  • New Perspectives on Polyhedral Molecules and Their Crystal Structures Santiago Alvarez, Jorge Echeverria
    New Perspectives on Polyhedral Molecules and their Crystal Structures Santiago Alvarez, Jorge Echeverria To cite this version: Santiago Alvarez, Jorge Echeverria. New Perspectives on Polyhedral Molecules and their Crystal Structures. Journal of Physical Organic Chemistry, Wiley, 2010, 23 (11), pp.1080. 10.1002/poc.1735. hal-00589441 HAL Id: hal-00589441 https://hal.archives-ouvertes.fr/hal-00589441 Submitted on 29 Apr 2011 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Journal of Physical Organic Chemistry New Perspectives on Polyhedral Molecules and their Crystal Structures For Peer Review Journal: Journal of Physical Organic Chemistry Manuscript ID: POC-09-0305.R1 Wiley - Manuscript type: Research Article Date Submitted by the 06-Apr-2010 Author: Complete List of Authors: Alvarez, Santiago; Universitat de Barcelona, Departament de Quimica Inorganica Echeverria, Jorge; Universitat de Barcelona, Departament de Quimica Inorganica continuous shape measures, stereochemistry, shape maps, Keywords: polyhedranes http://mc.manuscriptcentral.com/poc Page 1 of 20 Journal of Physical Organic Chemistry 1 2 3 4 5 6 7 8 9 10 New Perspectives on Polyhedral Molecules and their Crystal Structures 11 12 Santiago Alvarez, Jorge Echeverría 13 14 15 Departament de Química Inorgànica and Institut de Química Teòrica i Computacional, 16 Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona (Spain).
    [Show full text]