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Current Awareness on Comparative and Functional Genomics Comparative and Functional Genomics Comp. Funct. Genom. 2001; 2: 265–272 DOI:10.1002/cfg.58 Current awareness on comparative and functional genomics 1 Reviews & symposia (Review). Yeast 17: (3) 218. Eisen JA. 2000. Inst Genomic Res, 9712 Med Ctr Dr, Rockville, Md 20850, USA. Horizontal gene transfer among microbial genomes: New 2001. Special database issue. Nucleic Acids Res 29: (1). insights from complete genome analysis. Curr Opin Genet Dev 10: (6) 2000. Special issue on the genomic exploration of yeasts. FEBS Lett 606. 487: (1). Ekker SC. 2000. Univ Minnesota, Dept Genet, Cell Biol & Dev, Beck- 2000. Special issue on the post-genome era (Articles in French). Biofutur man Ctr Transposon Res, 6-160 Jackson Hall, 321 Church St SE, Min- (206). neapolis, Mn 55455, USA. Morphants: A new systematic vertebrate 2000. Special issue: Human Genomics: The Basis of the Medicine of functional genomics approach (Review). Yeast 17: (4) 302. Tomorrow - Validating and using Pharmacogenomics - Second IFCC- Erlandsen H, Abola EE, Stevens RC. 2000. Scripps Clin & Research Roche Diagnostics Conference, Kyoto, Japan, 16-19 April 2000. Clin Inst, Department Mol Biol, La Jolla, Ca 92037, USA. Combining Chem Lab Med 38: (9). structural genomics and enzymology: Completing the picture in meta- 2000. Special issue: Pharmacogenomics. Eur J Pharmacol 410: (2-3). bolic pathways and enzyme active sites. Curr Opin Struct Biol 10: (6) Bell AC, West AG, Felsenfeld G*. 2001. *NIDDKD, Bethesda, Md 719. 20892, USA. Gene regulation: - Insulators and boundaries: Versatile Ferrier DEK, Holland PWH. 2001. Univ Reading, Sch Anim & Micro- regulatory elements in the eukaryotic genome (Review). Science 291: bial Sci, Whiteknights, Reading RG6 6AJ, England. Ancient origin of (5503) 447. the Hox gene cluster. Nat Rev Genet 2: (1) 33. Bernardi G. 2000. Stn Zool A Dohrn, Lab Evoluzione Mol, IT-80121 Galliot B. 2000. Univ Geneva, Dept Zool & Anim Biol, 30 Quai Ernest Naples, Italy. The compositional evolution of vertebrate genomes. Ansermet, CH-1211 Geneva 4, Switzerland. Conserved and divergent Gene 259: (1-2) 31. genes in apex and axis development of cnidarians. Curr Opin Genet Brady G. 2000. Univ Manchester, Sch Biol Sci, G.38 Stopford Bldg, Dev 10: (6) 629. Oxford Rd, Manchester M13 9PT, England. Expression profiling of Gautier C. 2000. Univ Lyon 1, Lab Biometry & Evolutionary Biol, 43 single mammalian cells: Small is beautiful. Yeast 17: (3) 211. Blvd 11 Nov, FR-69622 Villeurbanne, France. Compositional bias in Broder C, Venter JC. 2000. Celera Genomics Corp, 45 West Gude Dr, DNA. Curr Opin Genet Dev 10: (6) 656. Rockville, Md 20850, USA. Whole genomes: The foundation of new Graham A. 2000. KCL, Mol Neurobiol Grp, 4th Floor New Hunts Hse, biology and medicine - Commentary. Curr Opin Biotechnol 11: (6) Guys Campus, London SE1 9RT, England. The evolution of the verte- 581. brates: Genes and development. Curr Opin Genet Dev 10: (6) 624. Brussow H, Desiere F. 2000. Nestec Ltd, Nestle Res Ctr, Vers Chez Les Gurtler V, Mayall BC. 2001. Austin & Repatriat Med Ctr, Dept Micro- Blanc, CH-1000 Lausanne 26, Switzerland. Comparative phage ge- biol, Austin Campus, Studley Rd, Heidelberg, Vic 3084, Australia. Ge- nomics and the evolution of Siphoviridae: Insights from dairy phages nomic approaches to typing, taxonomy and evolution of bacterial iso- (Microreview). Mol Microbiol 39: (2) 213. lates (Review). Int J Syst Evol Microbiol 51: (1) 3. Bumol TF, Watanabe AM. 2001. Lilly Corp Ctr, Res Labs, Res Technol Hayakawa T, Rohrmann GF*, Hashimoto Y. 2000. *Oregon State Univ, & Prot, Indianapolis, In 46285, USA. Genetic information, genomic Dept Microbiol, Nash Hall 220, Corvallis, Or 97331, USA. Patterns of technologies, and the future of drug discovery. JAMA 285: (5) 551. genome organization and content in lepidopteran baculoviruses (Mini- Celniker SE. 2000. Lawrence Berkeley Natl Lab, Drosophila Genome review). Virology 278: (1) 1. Project, Berkeley, Ca 94720, USA. The Drosophila genome. Curr Horrocks P, Bowman S, Kyes S, Waters AP, Craig A*. 2000. *Univ Opin Genet Dev 10: (6) 612. Liverpool, Sch Trop Med, Pembroke Pl, Liverpool L3 5QA, England. Cockett M, Dracopoli N, Sigal E*. 2000. *Bristol Myers Squibb Co, Entering the post-genomic era of malaria research. Bull World Health Applied Genomics, 311 Pennington-Rocky Hill Rd, Pennington, NJ Organ 78: (12) 1424. 08534, USA. Applied genomics: Integration of the technology within Johnston M. 2000. Washington Univ, Dept Genet, 660 Euclid Ave, St pharmaceutical research and development. Curr Opin Biotechnol 11: Louis, Mo 63113, USA. The yeast genome: On the road to the Golden (6) 602. Age. Curr Opin Genet Dev 10: (6) 617. Cogoni C, Macino G. 2000. Univ Roma La Sapienza, Sezione Genet Justice MJ. 2000. Baylor Coll Med, Dept Biol & Human Genet, 1 Bay- Mol, IT-00161 Rome, Italy. Post-transcriptional gene silencing across lor Plaza, Houston, Tx 77030, USA. Capitalizing on large-scale mouse kingdoms. Curr Opin Genet Dev 10: (6) 638. mutagenesis screens (Review). Nat Rev Genet 1: (2) 109. Degtyarenko K. 2000. Wellcome Trust Genome, European Bioinformat Kaminski N. 2000. Chaim Sheba Med Ctr, Inst Resp Med, Funct Ge- Inst, EMBL Outstn, Cambridge CB10 1SD, England. Bioinorganic mo- nomics Unit, IL-52621 Tel Hashomer, Israel. Bioinformatics: A user’s tifs: Towards functional classification of metalloproteins (Review). perspective (Minireview). Am J Respir Cell Mol Biol 23: (6) 705. Bioinformatics 16: (10) 851. Knight RD, Freeland SJ, Landweber LF*. 2001. *Princeton Univ, Dept Dougherty ER. 2001. Texas A&M Univ, Dept Elect Engn, College Sta- Ecol & Evolut Biol, Princeton, NJ 08544, USA. Rewiring the key- tion, Tx 77843, USA. Small sample issues for microarray-based classi- board evolvability of the genetic code. Nat Rev Genet 2: (1) 49. fication (Review). Comp Funct Genom 2: (1) 28. Kusnirikova P, Cellarova E. 2000. Safarik Univ, Fac Sci, Dept Expt Bot Dovichi NJ, Zhang JZ. 2000. Univ Alberta, Dept Chem, Edmonton, Al- & Genet, Manesova 23, SK-04167 Kosice, Slovakia. Sequence data- berta, Canada T6G 2G2. How capillary electrophoresis sequenced the bases for molecular biologists (Review). Biologia 55: (6) 617. human genome. Angew Chem Int Ed 39: (24) 4463. Le TH, Blair D, McManus DP*. 2000. *Queensland Institute Med Dow JM, Daniels MJ*. 2000. *John Innes Ctr, Sainsbury Lab, Norwich Research, Mol Parasitol Unit, 300 Herston Road, Brisbane, Qld 4029, Res Park, Colney, Norwich NR4 7UH, England. Xylella genomics and Australia. Mitochondrial genomes of human helminths and their use as bacterial pathogenicity to plants (Review). Yeast 17: (4) 263. markers in population genetics and phylogeny (Review). Acta Trop 77: Dunham I. 2000. Wellcome Trust Genome Campus, The Sanger Ctr, (3) 243. Hinxton, Cambridge CB10 1SA, England. The gene guessing game Li JY, Boado RJ, Pardridge WM*. 2001. *UCLA, Dept Med, Los Ange- In order to keep subscribers up-to-date with the latest developments in their field, this current awareness service is provided by John Wiley & Sons and contains newly-published material on comparative and functional genomics. Each bibliography is divided into 16 sections. 1 Reviews & sympo- sia; 2 General; 3 Large-scale sequencing and mapping; 4 Evolutionary genomics; 5 Comparative genomics; 6 Pathways, gene families and regulons; 7 Pharmacogenomics; 8 Large-scale mutagenesis programmes; 9 Functional genomics; 10 Transcriptomics; 11 Proteomics; 12 Protein structural ge- nomics; 13 Metabolomics; 14 Genomic approaches to development; 15 Technological advances; 16 Bioinformatics. Within each section, articles are listed in alphabetical order with respect to author. If, in the preceding period, no publications are located relevant to any one of these headings, that section will be omitted. Copyright © 2001 John Wiley & Sons, Ltd. 266 Current awareness on comparative and functional genomics les, Ca 90095, USA. Blood-brain barrier genomics. J Cereb Blood Alto, Ca 94304, USA. Gene expression profiling of cardiovascular dis- Flow Metab 21: (1) 61. ease models. Curr Opin Biotechnol 11: (6) 598. Li M. 2000. Johns Hopkins Univ, Dept Physiol, 725 Nth Wolfe St, Bal- Sicheritz-Ponten T, Andersson SGE*. 2001. *Uppsala Univ, Dept Mol timore, Md 21205, USA. Applications of display technology in protein Evolut, Ctr Evolut Biol, SE-75236 Uppsala, Sweden. A phylogenomic analysis (Review). Nat Biotechnol 18: (12) 1251. approach to microbial evolution. Nucleic Acids Res 29: (2) 545. Lockhart DJ, Barlow C. 2001. Salk Inst Biol Studies, Genet Lab, 10010 Snijders AM, Meijer GA, Brakenhoff RH, Van den Brule AJC, Van Di- Nth Torrey Pines Rd, La Jolla, Ca 92037, USA. Expressing what’s on est PJ*. 2000. *Vrije Univ Hosp, Dept Pathol, Box 7057, NL-7057 your mind: DNA arrays and the brain. Nat Rev Neurosci 2: (1) 63. MB Amsterdam, The Netherlands. Microarray techniques in pathology: Loferer H. 2000. Biotech AG, Fraunhoferstr 20, DE-82152 Martinsried, Tool or toy? (Review). J Clin Pathol-Mol Pathol 53: (6) 289. Germany. Mining bacterial genomes for antimicrobial targets (Re- Sorrentino V, Barone V, Rossi D. 2000. Ist Sci San Raffaele, DIBIT, via view). Mol Med Today 6: (12) 470. Olgettina 58, IT-20132 Milan, Italy. Intracellular Ca2+ release channels Luzi L, Confalonieri S, Di Fiore PP, Pelicci PG. 2000. Ist Europeo On- in evolution. Curr Opin Genet Dev 10: (6) 662. col, Dept Expt Oncol, via Ripamonti 435, IT-20141 Milan, Italy. Evo- Stainier DYR. 2001. Univ Calif, Dept Biochem & Biophys, 513 Parnas- lution of Shc functions from nematode to human. Curr Opin Genet sus Ave, San Francisco, Ca 94143, USA. Zebrafish genetics and verte- Dev 10: (6) 668. brate heart formation. Nat Rev Genet 2: (1) 39. Mahan MJ, Heithoff DM, Sinsheimer RL, Low DA. 2000. Univ Calif, Steffen DL, Levine AE, Yarus S, Baasiri RA, Wheeler DA. 2000. Bio- Dept Mol Cellular & Dev Biol, Santa Barbara, Ca 93106, USA. As- medical Computing Inc, Houston, Tx 77005, USA. Digital reviews in sessment of bacterial pathogenesis by analysis of gene expression in molecular biology: Approaches to structured digital publication.
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