Rapid Characterization of Triterpene Saponins from Zornia Brasiliensis by HPLC-ESI-MS/MS

Total Page:16

File Type:pdf, Size:1020Kb

Rapid Characterization of Triterpene Saponins from Zornia Brasiliensis by HPLC-ESI-MS/MS molecules Article Rapid Characterization of Triterpene Saponins from Zornia brasiliensis by HPLC-ESI-MS/MS Yuri Mangueira Nascimento 1 , Lucas Silva Abreu 1 , Ramon Leal Lima 1, Vicente Carlos O. Costa 1, José Iranildo Miranda de Melo 2, Raimundo Braz-Filho 3 , Marcelo Sobral Silva 1 and Josean Fechine Tavares 1,* 1 Graduate Program in Natural and Synthetic Bioactive Products, Health Sciences Center, Universidade Federal da Paraíba, João Pessoa 58051-900, Paraíba, Brazil 2 Graduate Program in Ecology and Conservation, Department of Biology, Center for Biological and Health Sciences, Campina Grande 58429-500, Paraíba, Brazil 3 Center of Sciences and Technologies, Darcy Ribeiro Norte Fluminense State University, Campos dos Goytacazes 28013-600, Rio de Janeiro, Brazil * Correspondence: [email protected]; Tel.: +55-83-3216-7427 Academic Editors: David Popovich and Valeria Patricia Sülsen Received: 2 May 2019; Accepted: 9 July 2019; Published: 10 July 2019 Abstract: Zornia brasiliensis Vogel (Leguminosae) is a species popularly known in Brazil as “urinária”, “urinana”, and “carrapicho”, it is popularly used as a diuretic and in the treatment of venereal diseases. A specific methodology to obtain a saponin-enriched fraction and high-performance liquid chromatography coupled with diode array detection, ion trap mass spectrometry, and TOF-MS (HPLC-DAD-ESI-MS/MS) was applied for the analysis of triterpene saponins. The MS and MS/MS experiments were carried out by ionization in negative mode. Molecular mass and fragmentation data were used to support the structural characterization of the saponins. Based on retention times, high-resolution mass determination and fragmentation, 35 oleanane-triterpene saponins were tentatively identified in Z. brasiliensis. Keywords: triterpene saponins; soyasaponins; Zornia brasiliensis; HPLC-DAD-ESI-MS/MS 1. Introduction The family Leguminosae consists of approximately 770 genera and 19,500 species. It previously included only three subfamilies, but a recent study reorganized the Leguminosae into six subfamilies [1]. These include the subfamily Papilionoideae, which contains the greatest number of genera, including the genus Zornia. The genus Zornia contains approximately 80 species that are distributed throughout the world, mainly in tropical and subtropical regions. In Brazil, the genus is represented by 36 species, 15 of which are endemic [2,3]. Studies have investigated the pharmacological activities of compounds present in species of this genus, including cytotoxic, smooth muscle-relaxing, anticonvulsant, antibacterial, antitumor, anti-inflammatory, and antioxidant activities [4–12]. In turn, phytochemical studies have revealed the presence of isoflavonoids [13,14]. Zornia brasiliensis Vogel, a species popularly known in Brazil as “urinaria”, “urinana”, and “carrapicho”, is adopted in the alternative medicine as a diuretic and in the treatment of venereal diseases [15]. Z. brasiliensis is distributed in the North, Northeast, Center-West and Southeast regions of Brazil. It is associated with the Amazon, Caatinga, Cerrado, and Atlantic Forest phytogeographic domains [16], but is found mainly in the Brazilian Northeast [17] and Venezuela [18]. Two pharmacological studies of this species have reported the antinociceptive activity of 7-methoxyflavone isolated from its aerial parts [19] and the antitumor activity of its essential oil [20]. Molecules 2019, 24, 2519; doi:10.3390/molecules24142519 www.mdpi.com/journal/molecules Molecules 2019, 24, 2519 2 of 14 Molecules 2019, 24, x FOR PEER REVIEW 2 of 15 AA recentrecent phytochemicalphytochemical studystudy ofof thethe aerialaerial partsparts ofof thisthis speciesspecies resultedresulted inin thethe identificationidentification of 1414 compounds,compounds, including flavones,flavones, flavanones,flavanones, isoflavonoids,isoflavonoids, pterocarpans, chalcones, and a novelnovel glycosylated dihydrochalcone—and thisthis chalconechalcone showedshowed cytotoxiccytotoxic activity againstagainst HL-60HL-60 leukemicleukemic cellscells [[21].21]. Hyphenated techniques, such asas high-performancehigh-performance liquid chromatographychromatography (HPLC) coupledcoupled toto mass spectrometryspectrometry (MS)(MS) were were used used for for the the structural structural analysis analysis and and characterization characterization of saponinsof saponins [22 –[22–29]. This29]. This study study represents represents the firstthe first contribution contribution to describe to describe the existencethe existe ofnce triterpene of triterpene saponins saponins from from the genusthe genusZornia Zornia(Leguminosae). (Leguminosae). A total A total of 35 of saponins 35 saponins were were detected detected and and tentatively tentatively identified identified by MS by andMS and MS/ MS.MS/MS. 2. Results 2.1. Characterization of the Compounds by HPLC-ESI-MSHPLC-ESI-MS/MS/MS IdentificationIdentification ofof triterpenetriterpene saponinssaponins byby high-performancehigh-performance liquidliquid chromatography-electrospraychromatography-electrospray ionization-tandemionization-tandem massmass spectrometryspectrometry (HPLC-ESI-MS(HPLC-ESI-MS/MS)/MS) with collision-induced dissociation (CID) under negativenegative ESI-MSESI-MS isis aa well-establishedwell-established andand widelywidely employedemployed techniquetechnique [[24].24]. To obtainobtain thesethese MSMS/MS/MS data,data, aa low-resolutionlow-resolution massmass spectrometerspectrometer was used; and thethe accurateaccurate mass was obtained by a high-resolutionhigh-resolution spectrometer, bothboth usingusing thethe samesame ionizationionization parameters,parameters, and both coupledcoupled to aa high-performance liquidliquid chromatography chromatography system system under under the the same same chromatographic chromatographic conditions. conditions. The The 35 saponins35 saponins that that are are present present in thein the aerial aerial parts parts of Z. of brasiliensisZ. brasiliensisand and tentatively tentatively identified identified are are shown shown on baseon base peak peak chromatogram chromatogram (Figure (Figure1). 1). According to Pollier Pollier et et al., al., after after collision-induced collision-induced dissociation dissociation (CID) (CID) under under negative negative ESI-MS, ESI-MS, the thesaponins saponins undergo undergo glycosidic glycosidic cleavages, cleavages, retaining retaining the the charge charge at at the the reducing reducing end end (e.g., aglyconeaglycone containingcontaining fragment).fragment). In In the the MS MS/MS/MS spectrum, daughter ions provide information on the sugarsugar residuesresidues andand the the aglycone aglycone of theof the fragmented fragmented saponin. sapo Sugarnin. Sugar residues residues are mainly are mainly hexoses hexoses (e.g., glucose (e.g., andglucose galactose), and galactose), 6-deoxyhexoses 6-deoxyhexoses (e.g., rhamnose (e.g., rhamnose and fucose), and pentoses fucose), (e.g., pentoses arabinose (e.g., and arabinose xylose), and uronicxylose), acids and (e.g.,uronic glucuronic acids (e.g., acid glucuronic and galacturonic). acid and galacturonic). Figure 1. BaseBase peak peak chromatogram chromatogram (BPC) (BPC) of ofthe the concentr concentratedated fraction fraction of saponins of saponins obtained obtained by ESI- by ESI-MSMS/MS/ MSin negative in negative mode. mode. The sugarsugar residuesresidues andand thethe aglyconeaglycone couldcould bebe identifiedidentified fromfrom thethe MSMS/MS/MS spectra.spectra. TheThe typicaltypical losseslosses representrepresent waterwater ((−18 Da); andand/or/or rhamnosiderhamnoside residueresidue ((−146 Da); andand/or/or arabinosearabinose ((−150 Da); − − − andand/or/or glucuronicglucuronic acidacid ((−158158 Da).Da). Therefore, thethe daughterdaughter aglyconeaglycone ion,ion, [Aglycone[Aglycone − H]H]−− is based onon − − thisthis typetype oror patternpattern ofof analysis.analysis. Based onon thisthis analysis,analysis, thirty-fivethirty-five saponinssaponins fromfrom ZorniaZornia braziliensisbraziliensis couldcould bebe tentativelytentatively identifiedidentified byby massmass spectrometry.spectrometry. The MSMS/MS/MS data ofof thethe tentativelytentatively identifiedidentified saponinssaponins areare reportedreported inin TableTable1 .1. Molecules 2019, 24, 2519x FOR PEER REVIEW 13 of of 15 14 2.1.1. Aglycones Aglycones of Saponins of Z. Brasiliensis In thethe MS MS/MS/MS fragmentation fragmentation spectra spectra obtained obtained for the for 35 saponins,the 35 saponins, ions m/z 441–531 ions m/z Da, characteristic441–531 Da, characteristicof triterpene aglycones,of triterpene were aglycones, observed. were Through observed. the Through relationships the relationships of the deprotonated of the deprotonated ions of the ionssaponins— of the saponins—m/z 631.3856–999.5135m/z 631.3856–999.5135 Da, and the respectiveDa, and the fragment respective ions fragment at the m /ionsz 441–531 at the Da m/z interval— 441–531 10Da aglyconesinterval—10 were aglycones tentatively were identified tentatively (Figure identified2)[ 24]. (Figure Although 2) [24]. these Although aglycones these have aglycones been detected have beenonly asdetected daughter only ions as withdaughter nominal ionsm with/z values, nominal their m/z molecular values, formulastheir molecular can be predictedformulas can by thebe predictedmolecular by formula the molecular of the exact formula mass of of the the parent exact ion mass and of by the the parent observed ion lossesand by of the the sugarobserved residues losses [24 of]. β theSeven sugar
Recommended publications
  • <I>Anemone Raddeana</I>
    REVIEW Pharmacochemistry & Biomacromolecule Research Laboratories1, Qiqihar Medical University, Qiqihar; College of Pharmacy2, Changchun University of Chinese Medicine, Changchun, P. R.China Phytochemicals and bioactivities of Anemone raddeana Regel: a review Yong-Xu Sun 1,∗, Ji-Cheng Liu 1,∗, Da-You Liu 2,∗ Received April 28, 2011, accepted May 27, 2011 Ji-Cheng Liu, Qiqihar Medical University, 333 BuKui Street, JianHua District, Qiqihar, 161006, China [email protected] Da-YouLiu, College of Pharmacy, Changchun University of Chinese Medicine, 1035 BoShuo Road, Jing Yue Economic Development District, Changchun, 130117, China [email protected] Yong-Xu Sun, Pharmacochemistry & Biomacromolecule Research Laboratories, Qiqihar Medical University, 333 BuKui Street, JianHua District, Qiqihar, 161006, China [email protected] ∗These authors contributed equally to this work. Pharmazie 66: 813–821 (2011) doi: 10.1691/ph.2011.1574 Anemone raddeana, usually called as “ToujianLiang” in China, is an Anemone herb belonging to the Ranun- culaceae family. Until now there are in total 67 of chemical components identified including triterpenoids, steroids, lactones, fats and oils, saccharide and alkaloids. A broad spectrum of pharmacological activity of A. raddeana compounds have been reported, such as antitumor, antimicrobial, anti-inflammatory, sedative and analgesic activites, as well as anti-convulsant and anti-histamine effects. In view of this, we initiated this short review to present the phytochemical and pharmacological profile of A. raddeana to support future studies in this discipline. 1. Introduction Anemone raddeana Regel is a traditional Chinese medicinal herb belonging to the Anemone genus (Ranunculaceae), which is widely distributed in Russia (Far east), northeast of China, Japan and Korea (Chen et al.
    [Show full text]
  • Plant-Derived Triterpenoid Biomarkers and Their Applications In
    Plant-derived triterpeonid biomarkers: chemotaxonomy, geological alteration, and vegetation reconstruction Res. Org. Geochem. 35, 11 − 35 (2019) Reviews-2015 Taguchi Award Plant-derived triterpenoid biomarkers and their applications in paleoenvironmental reconstructions: chemotaxonomy, geological alteration, and vegetation reconstruction Hideto Nakamura* (Received November 22, 2019; Accepted December 27, 2019) Abstract Triterpenoids and their derivatives are ubiquitous in sediment samples. Land plants are major sources of non- hopanoid triterpenoids; these terpenoids comprise a vast number of chemotaxonomically distinct biomolecules. Hence, geologically occurring plant-derived triterpenoids (geoterpenoids) potentially record unique characteristics of paleovegetation and sedimentary environments, and serve as source-specific markers for studying paleoenviron- ments. This review is aimed at explaining the origin of triterpenoids and their use as biomarkers in elucidating paleo- environments. Herein, application of plant-derived triterpenoids is discussed in terms of: (i) their biosynthetic pathways. These compounds are primarily synthesized via oxidosqualene cyclase (OSCs) and serve as precursors for a variety of membrane sterols and steroid hormones. Studies on OSCs and resulting compounds have helped elucidate the diversity and origin of the parent terpenoids. (ii) their chemotaxonomic significance. Geochemically important classes of triterpenoid skeletons are useful in gathering and substantiating information on botanical ori- gin of
    [Show full text]
  • Quantification, Chemical and Biological Characterization of the Saponosides Material from Sida Cordifolia L
    Revista Cubana de Plantas Medicinales. 2013;18(2):298-314 ARTÍCULO ORIGINAL Quantification, chemical and biological characterization of the saponosides material from Sida cordifolia L. (escobilla) Cuantificación, caracterización química y biológica del contenido saponósido de Sida cordifolia L. (escobilla) Biol. Oscar Julián Velásquez Ballesteros, MSc. Elizabeth Murillo Perea, Dr. John Jairo Méndez, Dr. Walter Murillo Arango, Biol. Diana Alexandra Noreña Universidad del Tolima. Colombia. ABSTRACT Introduction: Sida cordifolia L. (Malvaceae) is a weed about which not much is known in Colombia. This plant is used in folk medicine to treat oral mucosa, blennorrhea, asthma and bronchitis. In Brazil it finds application as an anti-inflammatory, while in Colombia its "baba" is used for treating hair loss, constipation and internal fever, among other ailments. Objectives: to quantify the saponoside content and evaluate its antioxidant and antifungal functionality. Methods: we prepared organic, aqueous and hydroalcoholic extracts from the aerial section of the plant. The saponoside material was quantified by the DNS and p-anisaldehyde methods. The most concentrated extracts were selected for antioxidant and antifungal assays. Results: it was found that Sida cordifolia, collected in Ibague-Colombia, is a good source of saponins with diverse chemical structures, mainly of steroidal nature, some of which may be hecogenin, diosgenin or a homologue. Conclusions: these factors may contribute, at least in part, to the antioxidant and antifungal functionality of Sida cordifolia L., but this capacity may be modified if these saponins act independently or together with some other metabolites of the plant such as tannins, flavonoids steroids, and alkaloids among others. Key words: Sida cordifolia, saponins, weed, antioxidant, p-anisaldhyde.
    [Show full text]
  • NIH Public Access Author Manuscript Nat Prod Rep
    NIH Public Access Author Manuscript Nat Prod Rep. Author manuscript; available in PMC 2013 September 16. NIH-PA Author ManuscriptPublished NIH-PA Author Manuscript in final edited NIH-PA Author Manuscript form as: Nat Prod Rep. 2009 October ; 26(10): 1321–1344. doi:10.1039/b810774m. Plant-derived triterpenoids and analogues as antitumor and anti- HIV agents† Reen-Yen Kuo, Keduo Qian, Susan L. Morris-Natschke, and Kuo-Hsiung Lee* Natural Products Research Laboratories, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599-7568, USA. Abstract This article reviews the antitumor and anti-HIV activities of naturally occurring triterpenoids, including the lupane, ursane, oleanane, lanostane, dammarane, and miscellaneous scaffolds. Structure–activity relationships of selected natural compounds and their synthetic derivatives are also discussed. 1 Introduction Natural products are an excellent reservoir of biologically active compounds. For centuries, extracts from natural products have been a main source of folk medicines, and even today, many cultures still employ them directly for medicinal purposes. Among the classes of identified natural products, triterpenoids, one of the largest families, have been studied intensively for their diverse structures and variety of biological activities. As a continued study of naturally occurring drug candidates, this review describes the research progress over the last three years (2006–2008) on triterpenoids possessing cytotoxic or anti-HIV activity, with focus on the occurrence, biological activities, and structure–activity relationships of selected compounds and their synthetic derivatives. 2 Potential antitumor effects of triterpenoids 2.1 The lupane group Betulinic acid (1) is a naturally occurring pentacyclic triterpene belonging to the lupane family.
    [Show full text]
  • Open Natural Products Research: Curation and Dissemination of Biological Occurrences of Chemical Structures Through Wikidata
    bioRxiv preprint doi: https://doi.org/10.1101/2021.02.28.433265; this version posted March 1, 2021. The copyright holder has placed this preprint (which was not certified by peer review) in the Public Domain. It is no longer restricted by copyright. Anyone can legally share, reuse, remix, or adapt this material for any purpose without crediting the original authors. Open Natural Products Research: Curation and Dissemination of Biological Occurrences of Chemical Structures through Wikidata Adriano Rutz1,2, Maria Sorokina3, Jakub Galgonek4, Daniel Mietchen5, Egon Willighagen6, James Graham7, Ralf Stephan8, Roderic Page9, Jiˇr´ıVondr´aˇsek4, Christoph Steinbeck3, Guido F. Pauli7, Jean-Luc Wolfender1,2, Jonathan Bisson7, and Pierre-Marie Allard1,2 1School of Pharmaceutical Sciences, University of Geneva, CMU - Rue Michel-Servet 1, CH-1211 Geneva 4, Switzerland 2Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, CMU - Rue Michel-Servet 1, CH-1211 Geneva 4, Switzerland 3Institute for Inorganic and Analytical Chemistry, Friedrich-Schiller-University Jena, Lessingstr. 8, 07732 Jena, Germany 4Institute of Organic Chemistry and Biochemistry of the CAS, Flemingovo n´amˇest´ı2, 166 10, Prague 6, Czech Republic 5School of Data Science, University of Virginia, Dell 1 Building, Charlottesville, Virginia 22904, United States 6Dept of Bioinformatics-BiGCaT, NUTRIM, Maastricht University, Universiteitssingel 50, NL-6229 ER, Maastricht, The Netherlands 7Center for Natural Product Technologies, Program for Collaborative Research
    [Show full text]
  • Multifunctional Oxidosqualene Cyclases and Cytochrome P450 Involved in the Biosynthesis of Apple Fruit Triterpenic Acids
    Research Multifunctional oxidosqualene cyclases and cytochrome P450 involved in the biosynthesis of apple fruit triterpenic acids Christelle M. Andre1, Sylvain Legay1,Amelie Deleruelle1,2, Niels Nieuwenhuizen3, Matthew Punter3, Cyril Brendolise3, Janine M. Cooney4, Marc Lateur5, Jean-Francßois Hausman1, Yvan Larondelle2 and William A. Laing3 1Department of Environmental Research and Innovation, Luxembourg Institute of Science and Technology, Avenue des Hauts-Fourneaux, L-4362 Esch/Alzette, Luxembourg; 2Institut des Sciences de la Vie, UCLouvain, B-1348 Louvain-la-Neuve, Belgium; 3The New Zealand Institute for Plant & Food Research Limited, Mt Albert Research Centre, Private Bag 92 169, Auckland 1142, New Zealand; 4The New Zealand Institute for Plant & Food Research Limited, Ruakura, Hamilton 3240, New Zealand; 5Walloon Agricultural Research Centre, Rue de Liroux, B-5030 Gembloux, Belgium Summary Author for correspondence: Apple (Malus 9 domestica) accumulates bioactive ursane-, oleanane-, and lupane-type Christelle M. Andre triterpenes in its fruit cuticle, but their biosynthetic pathway is still poorly understood. Tel: +352 275 888 1 We used a homology-based approach to identify and functionally characterize two new Email: [email protected] oxidosqualene cyclases (MdOSC4 and MdOSC5) and one cytochrome P450 (CYP716A175). Received: 17 December 2015 The gene expression patterns of these enzymes and of previously described oxidosqualene Accepted: 29 March 2016 cyclases were further studied in 20 apple cultivars with contrasting triterpene profiles. MdOSC4 encodes a multifunctional oxidosqualene cyclase producing an oleanane-type New Phytologist (2016) triterpene, putatively identified as germanicol, as well as b-amyrin and lupeol, in the propor- doi: 10.1111/nph.13996 tion 82 : 14 : 4. MdOSC5 cyclizes 2,3-oxidosqualene into lupeol and b-amyrin at a ratio of 95 : 5.
    [Show full text]
  • Nomenclature of Organic Chemistry. IUPAC Recommendations and Preferred Names 2013
    International Union of Pure and Applied Chemistry Division VIII Chemical Nomenclature and Structure Representation Division Nomenclature of Organic Chemistry. IUPAC Recommendations and Preferred Names 2013. Prepared for publication by Henri A. Favre and Warren H. Powell, Royal Society of Chemistry, ISBN 978-0-85404-182-4 Appendix 3. STRUCTURES FOR ALKALOIDS, STEROIDS, TERPENOIDS, AND SIMILAR COMPOUNDS 1. Alkaloids H 13 12 16 17 H 14 1 H 2 10 9 11 15 HN20 8 3 5 4 H 7 H 6 19 H aconitane 16 17 H 5 9 6 21 19 18 8 N CH2-CH3 10 7 H 4 2 20 1 3 11 H 13 N H 14 15 12 CH3 22 ajmalan 17 CH3 16 6 5 H 21 9 4 H 8 N 10 7 2 20 19 1 3 CH 11 3 13 N H 14 15 18 12 akuammilan (named systematically by CAS) 24 17 H O 5 21 16 6 4 15 20 9 N 7 H3C 10 8 23 H CH2-CH3 14 19 18 1 2 3 11 13 N 12 CH3 22 alstophyllan (named systematically by CAS) 3 4 2 5 6 1 N 11b 6a CH3 H 12 11a 11 7 10 8 9 aporphine (named systematically by CAS) 8 7 9 N H 6 10 19 5 14 11 21 4 15 20 13 12 3 1 2 16 18 N 17 H aspidofractinine (named systematically by CAS) 8 7 9 6 N 10 19 CH2-CH3 5 20 21 14 11 H 4 15 13 12 2 3 1 16 18 N H 17 H aspidospermidine 17 12 CH 16 3 11 20 14 H 13 1 9 15 2 10 8 HN21 H 5 3 4 7 6 19 H CH3 18 atidane (named systematically by CAS) 17 24 12 16 CH2 23 O 11 20 14 13 22 1 9 H 2 15 10 8 OH N21 H 5 3 4 7 H 6 19 CH3 18 atisine (named systematically by CAS) 4 5 5’ 4’ 3 6 6’ 3’ 2 2 7’ ’ HN 1 7 1’ NH H 8 O 8’ H 10 14 15 ’ 11 13’ 15’ 9 9 O ’ 14 12 12’ 10’ 13 11’ berbaman (named systematically by CAS) 4 5 4a 3 6 7 2 13a N 13b 8 1 H 8a 13 9 12a 12 10 11 berbine (named systematically
    [Show full text]
  • Saponins As Cytotoxic Agents: a Review
    Phytochem Rev (2010) 9:425–474 DOI 10.1007/s11101-010-9183-z Saponins as cytotoxic agents: a review Irma Podolak • Agnieszka Galanty • Danuta Sobolewska Received: 13 January 2010 / Accepted: 29 April 2010 / Published online: 25 June 2010 Ó The Author(s) 2010. This article is published with open access at Springerlink.com Abstract Saponins are natural glycosides which Con A Concanavalin A possess a wide range of pharmacological properties ER Endoplasmic reticulum including cytotoxic activity. In this review, the recent ERK Extracellular signal-regulated studies (2005–2009) concerning the cytotoxic activity kinase of saponins have been summarized. The correlations GADD Growth arrest and DNA damage- between the structure and the cytotoxicity of both inducible gene steroid and triterpenoid saponins have been described GRP Glucose regulated protein as well as the most common mechanisms of action. hTERT Telomerase reverse transcriptase JAK Janus kinase Keywords Cytotoxic mechanisms Á MEK = MAPK Mitogen-activated protein kinase Glycosides Á Sar Á Steroid Á Triterpenoid MMP Matrix metalloproteinase mTOR Mammalian target of rapamycin Abbreviations NFjB Nuclear factor kappa-light-chain- AMPK AMP activated protein kinase enhancer of activated B cells BiP Binding protein NO Nitric oxide BrDU Bromodeoxyuridine PARP Poly ADP ribose polymerase CCAAT Cytidine-cytidine-adenosine- PCNA Proliferating cell nuclear antigen adenosine-thymidine PI3K Phosphoinositide-3-kinase CD Cluster of differentiation molecule PP Protein phosphatase CDK Cyclin-dependent kinase PPAR-c Peroxisome proliferator-activated CEBP CCAAT-enhancer-binding protein receptor c CHOP CEPB homology protein Raf Serine/threonine specific kinase STAT Signal transducer and activator of transcription TIMP Tissue inhibitor of metallo- proteinase TSC Tuberous sclerosis complex VEGF Vascular endothelial growth factor & I.
    [Show full text]
  • Insights Into Triterpene Synthesis and Unsaturated Fatty-Acid Accumulation Provided by Chromosomal- Level Genome Analysis of Akebia Trifoliata Subsp
    Huang et al. Horticulture Research (2021) 8:33 Horticulture Research https://doi.org/10.1038/s41438-020-00458-y www.nature.com/hortres ARTICLE Open Access Insights into triterpene synthesis and unsaturated fatty-acid accumulation provided by chromosomal- level genome analysis of Akebia trifoliata subsp. australis Hui Huang 1,2,JuanLiang1,QiTan1,LinfengOu1, Xiaolin Li3, Caihong Zhong1, Huilin Huang1, Ian Max Møller 4, Xianjin Wu1 and Songquan Song1,5 Abstract Akebia trifoliata subsp. australis is a well-known medicinal and potential woody oil plant in China. The limited genetic information available for A. trifoliata subsp. australis has hindered its exploitation. Here, a high-quality chromosome- level genome sequence of A. trifoliata subsp. australis is reported. The de novo genome assembly of 682.14 Mb was generated with a scaffold N50 of 43.11 Mb. The genome includes 25,598 protein-coding genes, and 71.18% (485.55 Mb) of the assembled sequences were identified as repetitive sequences. An ongoing massive burst of long terminal repeat (LTR) insertions, which occurred ~1.0 million years ago, has contributed a large proportion of LTRs in the genome of A. trifoliata subsp. australis. Phylogenetic analysis shows that A. trifoliata subsp. australis is closely related to Aquilegia coerulea and forms a clade with Papaver somniferum and Nelumbo nucifera, which supports the well-established hypothesis of a close relationship between basal eudicot species. The expansion of UDP-glucoronosyl 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; and UDP-glucosyl transferase gene families and β-amyrin synthase-like genes and the exclusive contraction of terpene synthase gene families may be responsible for the abundant oleanane-type triterpenoids in A.
    [Show full text]
  • Introduction (Pdf)
    Dictionary of Natural Products on CD-ROM This introduction screen gives access to (a) a general introduction to the scope and content of DNP on CD-ROM, followed by (b) an extensive review of the different types of natural product and the way in which they are organised and categorised in DNP. You may access the section of your choice by clicking on the appropriate line below, or you may scroll through the text forwards or backwards from any point. Introduction to the DNP database page 3 Data presentation and organisation 3 Derivatives and variants 3 Chemical names and synonyms 4 CAS Registry Numbers 6 Diagrams 7 Stereochemical conventions 7 Molecular formula and molecular weight 8 Source 9 Importance/use 9 Type of Compound 9 Physical Data 9 Hazard and toxicity information 10 Bibliographic References 11 Journal abbreviations 12 Entry under review 12 Description of Natural Product Structures 13 Aliphatic natural products 15 Semiochemicals 15 Lipids 22 Polyketides 29 Carbohydrates 35 Oxygen heterocycles 44 Simple aromatic natural products 45 Benzofuranoids 48 Benzopyranoids 49 1 Flavonoids page 51 Tannins 60 Lignans 64 Polycyclic aromatic natural products 68 Terpenoids 72 Monoterpenoids 73 Sesquiterpenoids 77 Diterpenoids 101 Sesterterpenoids 118 Triterpenoids 121 Tetraterpenoids 131 Miscellaneous terpenoids 133 Meroterpenoids 133 Steroids 135 The sterols 140 Aminoacids and peptides 148 Aminoacids 148 Peptides 150 β-Lactams 151 Glycopeptides 153 Alkaloids 154 Alkaloids derived from ornithine 154 Alkaloids derived from lysine 156 Alkaloids
    [Show full text]
  • Syzygium Aromaticum (L.) Merr. & Perry
    Biological Evaluation and Semi-synthesis of Isolated Compounds from (Syzygium aromaticum (L.) Merr. & Perry) Buds Submitted in Partial Fulfillment for MSc. Degree in Organic Chemistry. In the Department of Chemistry, Faculty of Science and Agriculture, University of Fort Hare, Alice By Rali Sibusiso (200806318) Supervisor: Dr. O. O. Oyedeji Co-supervisor: Prof. B. N. Nkeh-Chungag 2014 DECLARATION I, RALI SIBUSISO (200806318), declare that this dissertation and the work presented in it are my own and has been generated by me as the result of my own original research. Biological evaluation and semi-synthesis of isolated compounds from (Syzygium aromaticum (L.) Merr. & Perry) buds I confirm that: 1. This work was done wholly or mainly while in candidature for a research degree at University of Fort Hare. 2. Where any part of this dissertation has previously been submitted for a degree or any other qualification at University of Fort Hare or any other institution, this has been clearly stated. 3. Where I have consulted the published work of others, this is always clearly attributed. 4. Where I have quoted from the work of others, the source is always given. With the exception of such quotations, this dissertation is entirely my own work. 5. I have acknowledged all main sources of help. 6. Where the dissertation is based on work done by myself jointly with others, I have made clear exactly what was done by others and what I have contributed myself. Signed: ………………………………………… Date: …………………………………………… i CERTIFICATE OF APPROVAL We hereby declare that this dissertation is from the student’s own work and effort, and all other sources of information used have been acknowledged.
    [Show full text]
  • Tetracyclic and Pentacyclic Triterpenes with High Therapeutic Efficiency in Wound Healing Approaches
    molecules Review Tetracyclic and Pentacyclic Triterpenes with High Therapeutic Efficiency in Wound Healing Approaches 1, 1, 2, 1 Roxana Ghiulai y, Oana Janina Ro¸sca y, Diana Simona Antal * , Marius Mioc , Alexandra Mioc 3, Roxana Racoviceanu 1 , Ioana Maca¸soi 4, Tudor Olariu 5, Cristina Dehelean 4, Octavian Marius Cre¸tu 6, Mirela Voicu 7,* and Codru¸ta¸Soica 1 1 Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd Eftimie Murgu Sq., 300041 Timi¸soara,Romania; [email protected] (R.G.); [email protected] (O.J.R.); [email protected] (M.M.); [email protected] (R.R.); [email protected] (C.¸S.) 2 Department of Pharmaceutical Botany, Faculty of Pharmacy, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd Eftimie Murgu Sq., 300041 Timi¸soara,Romania 3 Department of Anatomy, Physiology, Pathophysiology, Faculty of Pharmacy, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd Eftimie Murgu Sq., 300041 Timi¸soara,Romania; [email protected] 4 Department of Toxicology, Faculty of Pharmacy, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd EftimieMurgu Sq., 300041 Timi¸soara,Romania; [email protected] (I.M.); [email protected] (C.D.) 5 Department of Organic Chemistry, Faculty of Pharmacy, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd EftimieMurgu Sq., 300041 Timi¸soara,Romania; [email protected] 6 Department of Surgery, Faculty of Medicine, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd EftimieMurgu Sq., 300041 Timi¸soara,Romania; [email protected] 7 Department of Pharmacology, Faculty of Pharmacy, Victor Babe¸sUniversity of Medicine and Pharmacy, 2nd EftimieMurgu Sq., 300041 Timi¸soara,Romania * Correspondence: [email protected] (D.S.A.); [email protected] (M.V.); Tel.: +40-256-494-604 (D.S.A.
    [Show full text]