Properties of Three Iridovirus-Like Agents Associated with Systemic Infections of Fish
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Disease of Aquatic Organisms 105:1
Vol. 105: 1–8, 2013 DISEASES OF AQUATIC ORGANISMS Published July 9 doi: 10.3354/dao02594 Dis Aquat Org Megalocytivirus infection in orbiculate batfish Platax orbicularis Preeyanan Sriwanayos1, Ruth Francis-Floyd1,2, Mark F. Stidworthy3, Barbara D. Petty1,2, Karen Kelley4, Thomas B. Waltzek5,* 1Program in Fisheries and Aquatic Sciences, School of Forestry Resources and Conservation, University of Florida, Gainesville, Florida 32653, USA 2Department of Large Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, Florida 32610, USA 3International Zoo Veterinary Group, Station House, Parkwood Street, Keighley, West Yorkshire BD21 4NQ, UK 4Interdisciplinary Center for Biotechnology Research (ICBR), Cellomics Division, Electron Microscopy and Bio-imaging Core Laboratory, University of Florida, Gainesville, Florida 32611, USA 5Department of Infectious Diseases and Pathology, College of Veterinary Medicine, University of Florida, Gainesville, Florida 32608, USA ABSTRACT: Megalocytiviruses cause systemic disease in both marine and freshwater fishes, neg- atively impacting ornamental and food fish aquaculture. In this report, we characterize a megalo- cytivirus infection in a captive marine ornamental fish, the orbiculate batfish Platax orbicularis. Histologic examination revealed cytomegalic cells characterized by strongly basophilic granular intracytoplasmic inclusions within various organs. Transmission electron microscopy revealed icosahedral virus particles within the cytoplasm of cytomegalic cells consistent -
The DNA Virus Invertebrate Iridescent Virus 6 Is a Target of the Drosophila Rnai Machinery
The DNA virus Invertebrate iridescent virus 6 is a target of the Drosophila RNAi machinery Alfred W. Bronkhorsta,1, Koen W. R. van Cleefa,1, Nicolas Vodovarb,2, Ikbal_ Agah Ince_ c,d,e, Hervé Blancb, Just M. Vlakc, Maria-Carla Salehb,3, and Ronald P. van Rija,3 aDepartment of Medical Microbiology, Nijmegen Centre for Molecular Life Sciences, Nijmegen Institute for Infection, Inflammation, and Immunity, Radboud University Nijmegen Medical Centre, 6500 HB Nijmegen, The Netherlands; bViruses and RNA Interference Group, Institut Pasteur, Centre National de la Recherche Scientifique, Unité de Recherche Associée 3015, 75015 Paris, France; cLaboratory of Virology, Wageningen University, 6708 PB Wageningen, The Netherlands; dDepartment of Genetics and Bioengineering, Yeditepe University, Istanbul 34755, Turkey; and eDepartment of Biosystems Engineering, Faculty of Engineering, Giresun University, Giresun 28100, Turkey Edited by Peter Palese, Mount Sinai School of Medicine, New York, NY, and approved October 19, 2012 (received for review April 28, 2012) RNA viruses in insects are targets of an RNA interference (RNAi)- sequently, are hypersensitive to virus infection and succumb more based antiviral immune response, in which viral replication inter- rapidly than their wild-type (WT) controls (11–14). mediates or viral dsRNA genomes are processed by Dicer-2 (Dcr-2) Small RNA cloning and next-generation sequencing provide into viral small interfering RNAs (vsiRNAs). Whether dsDNA virus detailed insights into vsiRNA biogenesis. In several studies in infections are controlled by the RNAi pathway remains to be insects, the polarity of the vsiRNA population deviates strongly determined. Here, we analyzed the role of RNAi in DNA virus from the highly skewed distribution of positive strand (+) over infection using Drosophila melanogaster infected with Invertebrate negative (−) viral RNAs that is generally observed in (+) RNA iridescent virus 6 (IIV-6) as a model. -
Family Iridoviridae
Iridoviridae FAMILY IRIDOVIRIDAE TAXONOMIC STRUCTURE OF THE FAMILY Family Iridoviridae Genus Iridovirus Genus Chloriridovirus Genus Ranavirus Genus Lymphocystivirus DNA Genus Megalocytivirus DS VIRION PROPERTIES MORPHOLOGY Figure 1: (Top left) Outer shell of Invertebrate iridescent virus 2 (IIV-2) (From Wrigley, et al. (1969). J. Gen. Virol., 5, 123. With permission). (Top right) Schematic diagram of a cross-section of an iridovirus particle, showing capsomers, transmembrane proteins within the lipid bilayer, and an internal filamentous nucleoprotein core (From Darcy-Tripier, F. et al. (1984). Virology, 138, 287. With permission). (Bottom left) Transmission electron micrograph of a fat head minnow cell infected with an isolate of European catfish virus. Nucleus (Nu); virus inclusion body (VIB); paracrystalline array of non-enveloped virus particles (arrows); incomplete nucleocapsids (arrowheads); cytoplasm (cy); mitochondrion (mi). The bar represents 1 µm. (From Hyatt et al. (2000). Arch. Virol. 145, 301, with permission). (insert) Transmission electron micrograph of particles of Frog virus 3 (FV-3), budding from the plasma membrane. Arrows and arrowheads identify the viral envelope (Devauchelle et al. (1985). Curr. Topics Microbiol. Immunol., 116, 1, with permission). The bar represents 200 nm. 145 Part II - The Double Stranded DNA Viruses Virions display icosahedral symmetry and are usually 120-200 nm in diameter, but may be up to 350 nm (e.g. genus Lymphocystivirus). The core is an electron-dense entity consisting of a nucleoprotein filament surrounded by a lipid membrane containing transmembrane proteins of unknown function. The capsid is composed of identical capsomers, the number of which depends on virion size. Capsomers are organized to form trisymmetrons and pentasymmetrons in members of the Iridovirus and Chloriridovirus genera. -
A Review of Marine Viruses in Coral Ecosystem
Journal of Marine Science and Engineering Review A Review of Marine Viruses in Coral Ecosystem Logajothiswaran Ambalavanan 1 , Shumpei Iehata 1, Rosanne Fletcher 1, Emylia H. Stevens 1 and Sandra C. Zainathan 1,2,* 1 Faculty of Fisheries and Food Sciences, University Malaysia Terengganu, Kuala Nerus 21030, Terengganu, Malaysia; [email protected] (L.A.); [email protected] (S.I.); rosannefl[email protected] (R.F.); [email protected] (E.H.S.) 2 Institute of Marine Biotechnology, University Malaysia Terengganu, Kuala Nerus 21030, Terengganu, Malaysia * Correspondence: [email protected]; Tel.: +60-179261392 Abstract: Coral reefs are among the most biodiverse biological systems on earth. Corals are classified as marine invertebrates and filter the surrounding food and other particles in seawater, including pathogens such as viruses. Viruses act as both pathogen and symbiont for metazoans. Marine viruses that are abundant in the ocean are mostly single-, double stranded DNA and single-, double stranded RNA viruses. These discoveries were made via advanced identification methods which have detected their presence in coral reef ecosystems including PCR analyses, metagenomic analyses, transcriptomic analyses and electron microscopy. This review discusses the discovery of viruses in the marine environment and their hosts, viral diversity in corals, presence of virus in corallivorous fish communities in reef ecosystems, detection methods, and occurrence of marine viral communities in marine sponges. Keywords: coral ecosystem; viral communities; corals; corallivorous fish; marine sponges; detec- tion method Citation: Ambalavanan, L.; Iehata, S.; Fletcher, R.; Stevens, E.H.; Zainathan, S.C. A Review of Marine Viruses in Coral Ecosystem. J. Mar. Sci. Eng. 1. -
A Decade of Advances in Iridovirus Research
ADVANCES IN VIRUS RESEARCH, VOL 65 A DECADE OF ADVANCES IN IRIDOVIRUS RESEARCH Trevor Williams,*† Vale´rie Barbosa-Solomieu,‡ and V. Gregory Chinchar§ *Departmento de Produccio´n Agraria, Universidad Pu´blica de Navarra 31006 Pamplona, Spain †ECOSUR, Tapachula, Chiapas 30700, Mexico ‡Unite´ de Virologie Mole´culaire et Laboratoire de Ge´ne´tique des Poissons, INRA 78350 Jouy-en-Josas, France §Department of Microbiology, University of Mississippi Medical Center, Jackson Mississippi 39216 I. Introduction: Impact of Iridoviruses on the Health of Ectothermic Vertebrates II. Taxonomy A. Definition of the Family Iridoviridae B. Features Distinguishing the Genera C. Features Delineating the Species D. Relationships with Other Families of Large DNA Viruses III. Genomic Studies A. Genetic Content B. Gene Order and Elucidation of Gene Function IV. Viral Replication Strategy A. General Features of Iridovirus Replication B. RNA Synthesis: Virion-Associated and Virus-Induced Transcriptional Activators C. Inhibition of Host Macromolecular Synthesis D. Apoptosis V. Vertebrate Iridoviruses: Pathology and Diagnosis VI. Immune Responses to Vertebrate Iridoviruses VII. Ecology of Vertebrate Iridoviruses A. Infections in Natural Populations B. Infections in Farmed Populations VIII. Structure of Invertebrate Iridescent Viruses IX. Ecology of Invertebrate Iridescent Viruses A. Patent IIV Infections Are Usually Rare B. Seasonal Trends in Infections C. Covert Infections Can Be Common D. Covert Infections Are Detrimental to Host Fitness E. Host Range F. Transmission and Route of Infection G. Moisture is Crucial to IIV Survival in the Environment X. Iridoviruses in Noninsect Marine and Freshwater Invertebrates XI. Conclusions References 173 Copyright 2005, Elsevier Inc. All rights reserved. 0065-3527/05 $35.00 DOI: 10.1016/S0065-3527(05)65006-3 174 TREVOR WILLIAMS ET AL. -
Viruses Infecting Reptiles
Viruses 2011, 3, 2087-2126; doi:10.3390/v3112087 OPEN ACCESS viruses ISSN 1999-4915 www.mdpi.com/journal/viruses Review Viruses Infecting Reptiles Rachel E. Marschang Institut für Umwelt und Tierhygiene, University of Hohenheim, Garbenstr. 30, 70599 Stuttgart, Germany; E-Mail: [email protected]; Tel.: +49-711-459-22468; Fax: +49-711-459-22431 Received: 2 September 2011; in revised form: 19 October 2011 / Accepted: 21 October 2011 / Published: 1 November 2011 Abstract: A large number of viruses have been described in many different reptiles. These viruses include arboviruses that primarily infect mammals or birds as well as viruses that are specific for reptiles. Interest in arboviruses infecting reptiles has mainly focused on the role reptiles may play in the epidemiology of these viruses, especially over winter. Interest in reptile specific viruses has concentrated on both their importance for reptile medicine as well as virus taxonomy and evolution. The impact of many viral infections on reptile health is not known. Koch’s postulates have only been fulfilled for a limited number of reptilian viruses. As diagnostic testing becomes more sensitive, multiple infections with various viruses and other infectious agents are also being detected. In most cases the interactions between these different agents are not known. This review provides an update on viruses described in reptiles, the animal species in which they have been detected, and what is known about their taxonomic positions. Keywords: reptile; taxonomy; iridovirus; herpesvirus; adenovirus; paramyxovirus 1. Introduction Reptile virology is a relatively young field that has undergone rapid development over the past few decades. -
Horizontal Transfer of Transposons Between and Within Crustaceans and Insects M
Horizontal transfer of transposons between and within crustaceans and insects M. Dupeyron, Sébastien Leclercq, Didier Bouchon, Nicolas Cerveau, Clément Gilbert To cite this version: M. Dupeyron, Sébastien Leclercq, Didier Bouchon, Nicolas Cerveau, Clément Gilbert. Horizontal transfer of transposons between and within crustaceans and insects. Mobile DNA, BioMed Central, 2014, 5 (1), pp.4. 10.1186/1759-8753-5-4. hal-00955962 HAL Id: hal-00955962 https://hal.archives-ouvertes.fr/hal-00955962 Submitted on 28 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Copyright Dupeyron et al. Mobile DNA 2014, 5:4 http://www.mobilednajournal.com/content/5/1/4 RESEARCH Open Access Horizontal transfer of transposons between and within crustaceans and insects Mathilde Dupeyron1, Sébastien Leclercq1, Nicolas Cerveau1,2, Didier Bouchon1 and Clément Gilbert1* Abstract Background: Horizontal transfer of transposable elements (HTT) is increasingly appreciated as an important source of genome and species evolution in eukaryotes. However, our understanding of HTT dynamics is still poor in eukaryotes because the diversity of species for which whole genome sequences are available is biased and does not reflect the global eukaryote diversity. Results: In this study we characterized two Mariner transposable elements (TEs) in the genome of several terrestrial crustacean isopods, a group of animals particularly underrepresented in genome databases. -
Novel Viral Infections Threatening Cyprinid Fish
Bull. Eur. Ass. Fish Pathol., 36(1) 2016, 11 WORKSHOP Novel viral inections threatening Cyprinid sh O. Haenen1*, K. Way2*, B. Gorgoglione3, T. Ito4, R. Paley2, L. Bigarré5 and T. Walek6* 1 Central Veterinary Institute of Wageningen UR, The Netherlands; 2 Centre for Environment, Fisheries and Aquaculture Science (CEFAS), Weymouth DT4 8UB, England; 3 Clinical Division of Fish Medicine, ¢ȱȱ¢ȱǰȱ§ĵȱŗǰȱŗŘŗŖȱǰȱDzȱ4 Tamaki Laboratory, Aquatic Animal Health Division, National Research Institute of Aquaculture (NRIA), Fisheries Research ¢ǰȱȱśŗşȬŖŚŘřȱ Dzȱ5ȱǰȱ£·ǰȱDzȱ6 College of Veterinary Medicine, Department ȱ ȱȱȱ¢ǰȱ¢ȱȱǰȱ ǰȱȱřŘŜŗŗȬŖŞŞŖǰȱ * Workshop co-organizer Introduction In 2007 koi herpesvirus disease (KHVD), caused an open workshop was organized at the 17th by the alloherpesvirus Cyprinid herpesvirus 3 EAFP International Conerence on Diseases o (CyHV-3), was listed by the World Organiza- Fish and Shellsh. Seven short lectures were ol- tion or Animal Health (OIE) and was quickly lowed by a discussion, involving an audience o ollowed by listing as a non-exotic disease in the approximately 60 international experts. New eld European Union (EU), related to the Directive observations and preliminary research on novel 2006/88/EC (EC, 2006). Up until the listing o cyprinid viral inections were presented, aiming KHVD, Spring Viraemia o Carp (SVC) was to illustrate their impact in various geographic the only viral disease o cyprinids listed by the regions. The main topics presented included OIE (OIE, 2012). issues related to the current emergence and detec- tion o Cyprinid iridoviruses, Carp Edema Virus Apart rom CyHV-3 and SVCV, in the last ve (CEV), Cyprinid Herpesvirus 2 (CyHV-2), and a years, several novel non-notiable cyprinid novel myxo-like virus. -
Iridovirus (Genus Ranavirus) And
Veterinary Microbiology 172 (2014) 129–139 Contents lists available at ScienceDirect Veterinary Microbiology jo urnal homepage: www.elsevier.com/locate/vetmic Virion-associated viral proteins of a Chinese giant salamander (Andrias davidianus) iridovirus (genus Ranavirus) and functional study of the major capsid protein (MCP) a b a b a,c Wei Li , Xin Zhang , Shaoping Weng , Gaoxiang Zhao , Jianguo He , a, Chuanfu Dong * a State Key Laboratory for Biocontrol, School of Life Sciences, Sun Yat-sen University, 135 Xingang Road West, Guangzhou 510275, PR China b Department of Biology, Jinan University, Guangzhou 510632, PR China c School of Marine Sciences, Sun Yat-sen University, 135 Xingang Road West, Guangzhou 510275, PR China A R T I C L E I N F O A B S T R A C T Chinese giant salamander iridovirus (CGSIV) is the emerging causative agent to farmed Article history: Received 9 November 2013 Chinese giant salamanders in nationwide China. CGSIV is a member of the common Received in revised form 1 May 2014 midwife toad ranavirus (CMTV) subset of the amphibian-like ranavirus (ALRV) in the Accepted 4 May 2014 genus Ranavirus of Iridoviridae family. However, viral protein information on ALRV is lacking. In this first proteomic analysis of ALRV, 40 CGSIV viral proteins were detected Keywords: from purified virus particles by liquid chromatography-tandem mass spectrometry Chinese giant salamander iridovirus analysis. The transcription products of all 40 identified virion proteins were confirmed by Proteomics reverse transcription polymerase chain reaction analysis. Temporal expression pattern Virion protein analysis combined with drug inhibition assay indicated that 37 transcripts of the 40 virion Major capsid protein (MCP) siRNA protein genes could be classified into three temporal kinetic classes, namely, 5 immediate early, 12 delayed early, and 20 late genes. -
Iridovirus Infections of Captive and Free-Ranging Chelonians in the United States
IRIDOVIRUS INFECTIONS OF CAPTIVE AND FREE-RANGING CHELONIANS IN THE UNITED STATES By APRIL JOY JOHNSON A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 2006 Copyright 2006 by April Joy Johnson ACKNOWLEDGMENTS Funding for this work was provided in part by the University of Florida College of Veterinary Medicine Batchelor Foundation, grant No. D04Z0-11 from the Morris Animal Foundation, and a grant from the Disney Conservation Fund. I also thank the University of Florida, College of Veterinary Medicine for awarding me an Alumni Fellowship for tuition and stipend over the first three years. I would like to thank the many people who helped collect and submit turtle and tortoise samples including Dr. William Belzer, Dr. Terry Norton, Jeffrey Spratt, Valorie Titus, Susan Seibert and Ben Atkinson. Also, I would like to thank all the pathologists who contributed to this work including Dr. Allan Pessier, Dr. Nancy Stedman, Dr. Robert Wagner and Dr. Jason Brooks. I thank Drs. Jerry Stanley and Kathy Goodblood for allowing me access to chelonian and amphibian populations at Buttermilk Hill Nature Sanctuary and to Drs. Mick Robinson and Ken Dodd for providing necropsy reports on archived cases. I would also like to thank the Mycoplasma Research Laboratory at the University of Florida including Dr. Mary Brown, Dr. Lori Wendland and Dina Demcovitz for providing access to their wild gopher tortoise plasma bank. I thank Yvonne Cates at the Zoological Society of San Diego for excellent histology support and Lynda Schneider from the University of Florida Electron Microscopy Core Laboratory. -
The Molecular Biology of Frog Virus 3 and Other Iridoviruses Infecting Cold-Blooded Vertebrates
Viruses 2011, 3, 1959-1985; doi:10.3390/v3101959 OPEN ACCESS viruses ISSN 1999-4915 www.mdpi.com/journal/viruses Review The Molecular Biology of Frog Virus 3 and other Iridoviruses Infecting Cold-Blooded Vertebrates V. Gregory Chinchar 1,*, Kwang H. Yu 1 and James K. Jancovich 2 1 Department of Microbiology, University of Mississippi Medical Center, 2500 N. State Street, Jackson, MS 39216, USA 2 Department of Biology, California State University - San Marcos, 333 South Twin Oaks Valley Road, San Marcos, CA 92096, USA * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-601-984-1743; Fax: +1-601-984-1708. Received: 30 August 2011; in revised form: 27 September 2011 / Accepted: 27 September 2011/ Published: 20 October 2011 Abstract: Frog virus 3 (FV3) is the best characterized member of the family Iridoviridae. FV3 study has provided insights into the replication of other family members, and has served as a model of viral transcription, genome replication, and virus-mediated host-shutoff. Although the broad outlines of FV3 replication have been elucidated, the precise roles of most viral proteins remain unknown. Current studies using knock down (KD) mediated by antisense morpholino oligonucleotides (asMO) and small, interfering RNAs (siRNA), knock out (KO) following replacement of the targeted gene with a selectable marker by homologous recombination, ectopic viral gene expression, and recombinant viral proteins have enabled researchers to systematically ascertain replicative- and virulence-related gene functions. In addition, the application of molecular tools to ecological studies is providing novel ways for field biologists to identify potential pathogens, quantify infections, and trace the evolution of ecologically important viral species. -
Emerging Infectious Diseases of Chelonians
Emerging Infectious Diseases of Chelonians a, Paul M. Gibbons, DVM, MS, DABVP (Reptiles and Amphibians) *, b Zachary J. Steffes, DVM KEYWORDS Testudines Chelonians Adenovirus Iridovirus Ranavirus Coccidiosis Cryptosporidiosis KEY POINTS Intranuclear coccidiosis of Testudines is a newly emerging disease found in numerous chelonian species that should be on the differential list for all cases of systemic illness and cases with clinical signs involving multiple organ systems. Early diagnosis and treat- ment is essential, and PCR performed on conjunctival, oral and choanal mucosa, and cloacal tissue seems to be the most useful antemortem diagnostic tool. Cryptosporidium spp have been observed in numerous chelonians globally, and are sometimes associated with chronic diarrhea, anorexia, pica, decreased growth rate, weight loss, lethargy, or passing undigested feed. A consensus PCR can be performed on feces to identify the species of Cryptosporidium. No treatments have been shown to clear infection, but paromomycin did eliminate clinical signs of disease in a group of Testudo hermanni. Iridoviral infection is an emerging disease of chelonians in outdoor environments that usually presents with signs of upper respiratory disease, oral ulceration, cutaneous abces- sation, subcutaneous edema, anorexia, and lethargy. The disease can be highly fatal in turtles, and can be screened for with PCR of oral and cloacal swabs, and whole blood. Adenoviral disease is newly recognized in chelonians and presents most commonly with signs of hepatitis, enteritis, esophagitis, splenitis, and encephalopathy. Death is common in affected chelonians. PCR of cloacal and plasma samples has shown promise for ante- mortem detection, although treatment has proved unsuccessful to date. Several infectious diseases continue to be prevalent in captive and wild chelonians.