Rubiaceae) Neocaledonicarum Specierum Nomenclator
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Supplementary File 1 To: Tarennella, a New Pavetteae (Rubiaceae) Genus from Eastern Madagascar Petra De Block, Franck Rakotonasolo, Sylvain G
Supplementary file 1 to: Tarennella, a new Pavetteae (Rubiaceae) genus from eastern Madagascar Petra De Block, Franck Rakotonasolo, Sylvain G. Razafimandimbison, Aaron P. Davis & Steven B. Janssens Plant Ecology and Evolution 154(1), 2021 Supplementary file 1 – List of taxa used in the phylogenetic analyses with voucher information (geographic origin, collection, herbarium) and GenBank accession numbers for the plastid and nuclear markers rps16, trnT-F, ITS, petD, accD-psa1 and PI. Previously published sequences are all from De Block et al. (2015, 2018) except for those indicated with § from Bremer and Eriksson (2009). New sequences are marked with *. Species name Voucher Country rps16 trnT-F ITS petD accD-psa1 PI Coptosperma Hook.f. C. borbonicum (Hend. & Andr.Hend.) De Block De Block 1389 (BR) Comoros KM592189 KM592096 KM592283 MH175359 MH175297 MH175411 C. graveolens (S.Moore) Degreef Mwachala 3711 (BR) Kenya KM592200 KM592107 KM592293 MH175360 MH175298 MH175412 C. littorale (Hiern) Degreef Luke et al. 9954 (UPS) Mozambique KM592190 KM592097 KM592284 MH175361 MH175299 MH175413 C. madagascariense (Baill.) De Block Razafimandimbison et al. 577 (UPS) Madagascar KM592191 KM592098 – MH175362 MH175300 – C. madagascariense (Baill.) De Block De Block et al. 2238 (BR) Madagascar – – KM592285 – – – C. nigrescens Hook.f. De Block et al. 535 (BR) Madagascar KM592192 KM592099 KM592286 MH175363 MH175301 MH175414 C. nigrescens Hook.f. Luke & Luke 9030 (UPS) Kenya KM592193 KM592100 KM592287 MH175364 MH175302 – C. peteri (Bridson) Degreef Lovett & Congdon 2991 (BR) Tanzania KM592201 KM592108 KM592294 MH175365 MH175303 MH175415 C. supra-axillare (Hemsl.) Degreef De Block et al. 1321 (BR) Madagascar KM592194 KM592101 KM592288 MH175366 MH175304 MH175416 C. sp. nov. B De Block et al. -
Large Distribution and High Sequence Identity of a Copia‑Type Retrotransposon in Angiosperm Families Elaine Silva Dias, Clémence Hatt, Perla Hamon, Serge Hamon, M
Large distribution and high sequence identity of a Copia‑type retrotransposon in angiosperm families Elaine Silva Dias, Clémence Hatt, Perla Hamon, Serge Hamon, M. Rigoreau, D. Crouzillat, C.M.A. Carareto, Alexandre De Kochko, Romain Guyot To cite this version: Elaine Silva Dias, Clémence Hatt, Perla Hamon, Serge Hamon, M. Rigoreau, et al.. Large distribution and high sequence identity of a Copia‑type retrotransposon in angiosperm families. Plant Molecular Biology, Springer Verlag (Germany), 2015, 89 (1-2), pp.83-97. 10.1007/s11103-015-0352-8. ird- 01225496 HAL Id: ird-01225496 https://hal.ird.fr/ird-01225496 Submitted on 6 Nov 2015 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Manuscript details Click here to download Manuscript details: Manuscript-details.docx Click here to view linked References Large distribution and high sequence identity of a Copia-type retrotransposon in angiosperm families Elaine Silva Dias1,3 ([email protected]) Clémence Hatt1 ([email protected]) Serge Hamon1 ([email protected]) Perla Hamon1 ([email protected]) Michel Rigoreau2 ([email protected]) Dominique Crouzillat2([email protected]) Claudia Marcia Aparecida Carareto3 ([email protected]) Alexandre de Kochko1 ([email protected]) Romain Guyot4* ([email protected]) 1IRD UMR DIADE, EVODYN, BP 64501, 34394 Montpellier Cedex 5, France 2Nestlé R&D Tours, 101 AV. -
Using the Checklist N W C
Using the checklist • The arrangement of the checklist is alphabetical by family followed by genus, grouped under Pteridophyta, Gymnosperms, Monocotyledons and Dicotyledons. • All species and synonyms are arranged alphabetically under genus. • Accepted names are in bold print while synonyms or previously-used names are in italics. • In the case of synonyms, the currently used name follows the equals sign (=), and only refers to usage in Zimbabwe. • Distribution information is included under the current name. • The letters N, W, C, E, and S, following each listed taxon, indicate the known distribution of species within Zimbabwe as reflected by specimens in SRGH or cited in the literature. Where the distribution is unknown, we have inserted Distr.? after the taxon name. • All species known or suspected to be fully naturalised in Zimbabwe are included in the list. They are preceded by an asterisk (*). Species only known from planted or garden specimens were not included. Mozambique Zambia Kariba Mt. Darwin Lake Kariba N Victoria Falls Harare C Nyanga Mts. W Mutare Gweru E Bulawayo GREAT DYKEMasvingo Plumtree S Chimanimani Mts. Botswana N Beit Bridge South Africa The floristic regions of Zimbabwe: Central, East, North, South, West. A checklist of Zimbabwean vascular plants A checklist of Zimbabwean vascular plants edited by Anthony Mapaura & Jonathan Timberlake Southern African Botanical Diversity Network Report No. 33 • 2004 • Recommended citation format MAPAURA, A. & TIMBERLAKE, J. (eds). 2004. A checklist of Zimbabwean vascular plants. -
Conservation Status of the Vascular Plants in East African Rain Forests
Conservation status of the vascular plants in East African rain forests Dissertation Zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaft des Fachbereich 3: Mathematik/Naturwissenschaften der Universität Koblenz-Landau vorgelegt am 29. April 2011 von Katja Rembold geb. am 07.02.1980 in Neuss Referent: Prof. Dr. Eberhard Fischer Korreferent: Prof. Dr. Wilhelm Barthlott Conservation status of the vascular plants in East African rain forests Dissertation Zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaft des Fachbereich 3: Mathematik/Naturwissenschaften der Universität Koblenz-Landau vorgelegt am 29. April 2011 von Katja Rembold geb. am 07.02.1980 in Neuss Referent: Prof. Dr. Eberhard Fischer Korreferent: Prof. Dr. Wilhelm Barthlott Early morning hours in Kakamega Forest, Kenya. TABLE OF CONTENTS Table of contents V 1 General introduction 1 1.1 Biodiversity and human impact on East African rain forests 2 1.2 African epiphytes and disturbance 3 1.3 Plant conservation 4 Ex-situ conservation 5 1.4 Aims of this study 6 2 Study areas 9 2.1 Kakamega Forest, Kenya 10 Location and abiotic components 10 Importance of Kakamega Forest for Kenyan biodiversity 12 History, population pressure, and management 13 Study sites within Kakamega Forest 16 2.2 Budongo Forest, Uganda 18 Location and abiotic components 18 Importance of Budongo Forest for Ugandan biodiversity 19 History, population pressure, and management 20 Study sites within Budongo Forest 21 3 The vegetation of East African rain forests and impact -
Article Homollea.Indd
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: European Journal of Taxonomy Jahr/Year: 2018 Band/Volume: 0423 Autor(en)/Author(s): de Block Petra Artikel/Article: Revision of the Madagascan endemic Homollea (Rubiaceae - Pavetteae), with description of two new species 1-24 © European Journal of Taxonomy; download unter http://www.europeanjournaloftaxonomy.eu; www.zobodat.at European Journal of Taxonomy 423: 1–24 ISSN 2118-9773 https://doi.org/10.5852/ejt.2018.423 www.europeanjournaloftaxonomy.eu 2018 · De Block P. This work is licensed under a Creative Commons Attribution 3.0 License. Research article Revision of the Madagascan endemic Homollea (Rubiaceae - Pavetteae), with description of two new species Petra DE BLOCK Botanic Garden Meise, Nieuwelaan 38, B-1860 Meise, Belgium. Email: [email protected] Abstract. Homollea Arènes (Rubiaceae, subfamily Ixoroideae, tribe Pavetteae) is a genus of shrubs and small trees endemic to western and northern Madagascar. The genus comprises fi ve species occurring in dry deciduous forest, often in limestone areas. The fi ve species are narrow endemics and their conservation status is either Endangered (4 species) or Critically Endangered (1 species). Homollea is characterized by few-fl owered, pseudo-axillary, pedunculate infl orescences, well-developed calyces with the lobes much longer than the tube, laterally fl attened seeds with a shallow, elongated to linear hilum and entire endosperm, ovules arising from the upper margin of the placenta, and, pollen grains with supratectal elements in the shape of microgemmae. Until now, three species were known and their descriptions are amended. -
Rubiaceae) Genus from Eastern Madagascar
Plant Ecology and Evolution 154 (1): 87–110, 2021 https://doi.org/10.5091/plecevo.2021.1756 RESEARCH ARTICLE Tarennella, a new Pavetteae (Rubiaceae) genus from eastern Madagascar Petra De Block1,*, Franck Rakotonasolo2,3, Sylvain G. Razafimandimbison4, Aaron P. Davis4 & Steven B. Janssens1 1Meise Botanic Garden, Nieuwelaan 38, BE-1860 Meise, Belgium 2Kew Madagascar Conservation Centre, Lot II J 131 Ambodivoanjo, Ivandry, Antananarivo, Madagascar 3Parc Botanique et Zoologique de Tsimbazaza, Antananarivo-101, Madagascar 4Swedish Museum of Natural History, Department of Botany, Box 50007, SE-104 05 Stockholm, Sweden 5Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AE, UK *Corresponding author: [email protected] Background – This contribution is part of an ongoing study on the taxonomy and the phylogenetic relationships of the Malagasy representatives of the tribe Pavetteae (Rubiaceae). Material and methods – Taxonomic methods follow normal practice of herbarium taxonomy. A molecular study using the plastid markers rps16, trnT-F, petD, and accD-psa1, the nuclear ribosomal marker ITS and the nuclear MADS-box gene marker PI was executed. Key results – Five new species are described from littoral, lowland, or mid-elevation humid forests in eastern Madagascar. They are characterized by compact inflorescences with small, sessile flowers, a densely pubescent style, large placentas with 2–3 immersed ovules, seeds with a small, superficial hilum not surrounded by a thickened annulus, and pollen grains with supratectal elements. The phylogenetic tree, which included three of the five new species, showed an unresolved backbone but high support for distal nodes grouping species. The new species form a distinct monophyletic clade among the other Malagasy Pavetteae genera and are recognised at genus level under the name Tarennella. -
A Checklist of the Genus Tarenna Gaertn. (Rubiaceae) in Thailand
THAI FOR. BULL. (BOT.) 36: 18–45. 2008. A checklist of the genus Tarenna Gaertn. (Rubiaceae) in Thailand WIROT KESONBUA* & PRANOM CHANTARANOTHAI* ABSTRACT. A checklist of the genus Tarenna in Thailand is presented. Twenty-four species and one variety are recorded. T. cinnamomea Craib, T. elliptica Craib, T. pubescens Craib and T. viridis Craib are reduced to synonymy of T. pulchra (Ridl.) Ridl., T. collinsae Craib, T. cinerea Craib and T. puberula Craib, respectively. A key to the species is provided, together with ecological data and information on the geographical distribution. Some species are illustrated. INTRODUCTION The generic name Tarenna was established in 1788 when J. Gaertner described the genus in his De Fructibus et Seminibus Plantarum. The genus name is based on the vernacular name of T. zeylanica Gaertn., which was known to the natives of Ceylon as Tarennae (Merrill, 1920). The genus contains ca 180 species, and is distributed in the tropical parts of Asia and Africa (De Block & Robbrecht, 1998) with species occurring in primary evergreen forests and scrub in the lowlands as well as at higher altitude. The delimitation of the infrageneric elements of the genus Tarenna is largely based on placentation and seed type which are both very variable in morphology and anatomy (Bridson 1979; De Block et al. 2001). For example, in terms of placentation, the number of ovules per locule varies from one to numerous; they may be (partly) immersed in the placenta or pendulous from it; the placenta itself may be attached at the upper half, the middle or at the lower half of the septum. -
Distance Dispersal and Species Radiation in the Western Indian Ocean
Journal of Biogeography (J. Biogeogr.) (2017) 44, 1966–1979 ORIGINAL Island hopping, long-distance dispersal ARTICLE and species radiation in the Western Indian Ocean: historical biogeography of the Coffeeae alliance (Rubiaceae) Kent Kainulainen1,3,* , Sylvain G. Razafimandimbison2,3 , Niklas Wikstrom€ 3 and Birgitta Bremer3 1University of Michigan Herbarium, ABSTRACT Department of Ecology and Evolutionary Aim The Western Indian Ocean region (WIOR) is home to a very diverse and Biology, Ann Arbor, MI 48108, USA, 2 largely unique flora that has mainly originated via long-distance dispersals. The Department of Botany, Swedish Museum of Natural History, SE-10405 Stockholm, aim of this study is to gain insight into the origins of the WIOR biodiversity Sweden, 3The Bergius Foundation, The Royal and to understand the dynamics of colonization events between the islands. Swedish Academy of Sciences, Department of We investigate spatial and temporal hypotheses of the routes of dispersal, and Ecology, Environment and Plant Sciences, compare the dispersal patterns of plants of the Coffeeae alliance (Rubiaceae) Stockholm University, SE-106 91 Stockholm, and their dispersers. Rubiaceae is the second most species-rich plant family in Sweden Madagascar, and includes many endemic genera. The neighbouring archipela- gos of the Comoros, Mascarenes and Seychelles also harbour several endemic Rubiaceae. Location The islands of the Western Indian Ocean. Methods Phylogenetic relationships and divergence times were reconstructed from plastid DNA data of an ingroup sample of 340 species, using Bayesian inference. Ancestral areas and range evolution history were inferred by a maxi- mum likelihood method that takes topological uncertainty into account. Results At least 15 arrivals to Madagascar were inferred, the majority of which have taken place within the last 10 Myr. -
Savanna Fire and the Origins of the “Underground Forests” of Africa
SAVANNA FIRE AND THE ORIGINS OF THE “UNDERGROUND FORESTS” OF AFRICA Olivier Maurin1, *, T. Jonathan Davies1, 2, *, John E. Burrows3, 4, Barnabas H. Daru1, Kowiyou Yessoufou1, 5, A. Muthama Muasya6, Michelle van der Bank1 and William J. Bond6, 7 1African Centre for DNA Barcoding, Department of Botany & Plant Biotechnology, University of Johannesburg, PO Box 524 Auckland Park 2006, Johannesburg, Gauteng, South Africa; 2Department of Biology, McGill University, 1205 ave Docteur Penfield, Montreal, QC H3A 0G4, Quebec, Canada; 3Buffelskloof Herbarium, P.O. Box 710, Lydenburg, 1120, South Africa; 4Department of Plant Sciences, University of Pretoria, Private Bag X20 Hatfield 0028, Pretoria, South Africa; 5Department of Environmental Sciences, University of South Africa, Florida campus, Florida 1710, Gauteng, South Africa; 6Department of Biological Sciences and 7South African Environmental Observation Network, University of Cape Town, Rondebosch, 7701, Western Cape, South Africa *These authors contributed equally to the study Author for correspondence: T. Jonathan Davies Tel: +1 514 398 8885 Email: [email protected] Manuscript information: 5272 words (Introduction = 1242 words, Materials and Methods = 1578 words, Results = 548 words, Discussion = 1627 words, Conclusion = 205 words | 6 figures (5 color figures) | 2 Tables | 2 supporting information 1 SUMMARY 1. The origin of fire-adapted lineages is a long-standing question in ecology. Although phylogeny can provide a significant contribution to the ongoing debate, its use has been precluded by the lack of comprehensive DNA data. Here we focus on the ‘underground trees’ (= geoxyles) of southern Africa, one of the most distinctive growth forms characteristic of fire-prone savannas. 2. We placed geoxyles within the most comprehensive dated phylogeny for the regional flora comprising over 1400 woody species. -
Palynological Characters and Their Phylogenetic Signal in Rubiaceae
354 THE BOTANICAL REVIEW The Botanical Review 71(3): 354–414 Palynological Characters and Their Phylogenetic Signal in Rubiaceae STEVEN DESSEIN,1, 3 HELGA OCHOTERENA,2 PETRA DE BLOCK,3 FREDERIC LENS,1 ELMAR ROBBRECHT,3 PETER SCHOLS,1 ERIK SMETS,1 STEFAN VINCKIER,1 AND SUZY HUYSMANS1 1Laboratory of Plant Systematics, Institute of Botany and Microbiology Catholic University of Leuven Kasteelpark Arenberg 31, B-3001 Leuven, Belgium 2Instituto de Biología Universidad Nacional Autónoma de México Apdo. Postal 70-367, CP 04510, Mexico City, Mexico 3National Botanic Garden of Belgium Domein van Bouchout, B-1860 Meise, Belgium I. Abstract . 355 II. Introduction . 355 III. Material and Methods . 356 IV. Results . 357 A. Pollen Morphological Characteristics of Rubiaceae . 362 1. Dispersal Unit . 362 2. Pollen Size . 363 3. Pollen Shape . 365 4. Apertures . 366 a. Number . 366 b. Position . 366 c. Type . 367 d. Protruding Onci and Pollen Buds . 371 5. Sexine . 371 6. Nexine Ornamentation . 372 7. Stratification of the Pollen Wall . 373 B. Heterostyly and Pollen Dimorphism . 373 C. Orbicule Characteristics of Rubiaceae . 375 D. Fossil Pollen Record for Rubiaceae . 375 V. Discussion . 379 A. Systematic Significance of Pollen Morphology in Rubiaceae . 379 1. Subfamily Level . 379 2. Tribal Level . 381 Copies of this issue [71(3)] may be purchased from The NYBG Press, The New York Botanical Garden, Bronx, NY 10458-5126, U.S.A.; [email protected]. Please inquire as to prices. Issued 30 September 2005 © 2005 The New York Botanical Garden 354 PALYNOLOGICAL CHARACTERS IN RUBIACEAE 355 3. Generic and Infrageneric Level . 386 a. Generic Level . -
Checklist of Plants in the University Botanic Garden of Maseno and Their Significances to the Society
IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS) e-ISSN:2278-3008, p-ISSN:2319-7676. Volume 12, Issue 1 Ver. II (Jan. - Feb.2017), PP 27-49 www.iosrjournals.org Checklist of plants in the University Botanic Garden of Maseno and their significances to the society Stephen F. Sikolia1 and Seline Omondi1 Department of Botany, Maseno University, Kenya Abstract:A botanical garden is an area set aside and maintained by an organization for growing and studying various groups of plants for aesthetic, conservation, economic, educational, recreational and scientific purposes. A lot of research on checklisting of vascular plants has been or is being carried out in various botanic gardens around the world. At the University Botanic Garden Maseno, no elaborate research on check listing of plant species has been done. There has scarcely been any attempt to carry out phytochemical analysis on various in situ and ex situ plants conserved at the University Botanic Garden and no research has been done to document the educational and economic values of the garden. Moreover, the rate at which the plant biodiversity is being cleared is alarming, and calls for urgent need of conserving plants of high economic values. It is on the basis of such need that the study was carried out at the University Botanic Garden, Maseno (UBGM). The study was carried out over a period of eleven months. The main objective of the study was to identify and provide checklist of plants conserved at the University Botanic Garden, Maseno. During field survey observations were made, interviews conducted and notes taken on plant morphological characteristics and habit of plants. -
Madagascar Trees
The Red List of Trees of Madagascar Emily Beech, Malin Rivers, Marina Rabarimanarivo, Noro Ravololomanana, Nadiah Manjato, Faranirina Lantoarisoa, Sylvie Andriambololonera, Brigitte Ramandimbisoa, Hélène Ralimanana, Solofo Eric Rakotoarisoa, Henintsoa Razanajatovo, Velosoa Razafiniary, Andotiana Andriamanohera, Vonona Randrianasolo, Franck Rakotonasolo, Andry Rakotoarisoa, Nomentsoa Randriamamonjy, Landy Rajaovelona, Nantenaina Rakotomalala, Tianjanahary Randriamboavonjy, Mamy Tiana Rajaonah, David Rabehevitra, Aro Vonjy Ramarosandratana, Mijoro Rakotoarinivo, Bako Harisoa Ravaomanalina and Vololoniaina Jeannoda Published by Botanic Gardens Conservation International Descanso House, 199 Kew Road, Richmond, Surrey, TW9 3BW, UK. © 2021 Botanic Gardens Conservation International ISBN-10: 1-905164-77-7 ISBN-13: 978-1-905164-77-6 Reproduction of any part of the publication for educational, conservation and other non-profit purposes is authorized without prior permission from the copyright holder, provided that the source is fully acknowledged. Reproduction for resale or other commercial purposes is prohibited without prior written permission from the copyright holder. Recommended citation: Beech, E., Rivers, M., Rabarimanarivo, M., Ravololomanana, N., Manjato, N., Lantoarisoa, F., Andriambololonera, S., Ramandimbisoa, B., Ralimanana, H., Rakotoarisoa, S., Razanajatovo , H., Razafiniary, V., Andriamanohera, A., Randrianasolo, V., Rakotonasolo, F., Rakotoarisoa, A., Randriamamonjy, N., Rajaovelona, L., Rakotomalala, N., Randriamboavonjy, T.,