The Effects of Diagenesis and Dolomitization on Ca and Mg
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The Crazy Calcium Cycle. Eduardo A. Espeso Department of Cellular And
The CRaZy calcium cycle. Eduardo A. Espeso Department of Cellular and Molecular Biology Centro de Investigaciones Biológicas, CSIC. Ramiro de Maeztu, 9. 28040-Madrid. Spain. Key words: Crz1, calcineurin signaling, calcium pump, calcium channel, P-type ATPase, magnesium homeostasis Summary. Calcium is an essential cation for a cell. This cation participates in the regulation of numerous processes in either prokaryote s or eukaryotes, from bacteria to humans. Saccharomyces cerevisiae has served as a model organism to understand calcium homeostasis and calcium-dependent signaling in fungi. In this chapter it will be reviewed known and predicted transport mechanisms that mediate calcium homeostasis in the yeast. How and when calcium enters the cell, how and where it is stored, when is reutilized, and finally secreted to the environment to close the cycle. As a second messenger, maintenance of a controlled free intracellular calcium concentration is important for mediating transcriptional regulation. Many environmental stimuli modify the concentration of cytoplasmic free calcium generating the "calcium signal". This is sensed and transduced through the calmodulin/calcineurin pathway to a transcription factor, named c alcineurin-r esponsive z inc finger, CRZ, also known as "crazy" , to mediate transcriptional regulation of a large number of genes of diverse pathways including a negative feedback regulation of the calcium homeostasis system. A model of calcium regulation in yeasts In higher eukaryotes entry of calcium in the cell starts concatenated signaling events some of them are of enormous importance in animals such as initiation of the heartbeat or the synapses between neurons. In the budding yeast calcium mediates adaptation to a variety of stimuli such as the presence of mating pheromones (Iida et al., 1990), a damage to endoplasmic reticulum (Bonilla and Cunningham, 2003), and different ambient stresses like salinity, alkaline pH or high osmolarity [reviewed in (Cunningham, 2005)]. -
The Calcium Cycle
Curriculum Units by Fellows of the Yale-New Haven Teachers Institute 1985 Volume VII: Skeletal Materials- Biomineralization The Calcium Cycle Curriculum Unit 85.07.08 by Bill Duesing INTRODUCTION This unit is designed to be part of the Ecology course which is taught by High School in the Community at the West Rock Nature Center for four hours a day during the last quarter of the school year, The present ecology course involves both theoretical and practical studies relating to the earth and how it works. We will trace calcium in the biosphere from its location in igneous rocks in the early history of the earth to its location in the skeletons of high school students at the Nature Center. In the process of studying the transport and deposition of calcium we have a vehicle which touches on many of the important concepts we are teaching and relates to some of the hands-on activities the students are involved in. Some of the connections between the calcium cycle and the Ecology course are: Geology: Many of the students have no idea of the age and history of the earth and the great changes which it has gone through. How the calcium stored in the rocks in northwestern Connecticut came to be there touches on much of this chemistry: Most of the students have had very little exposure to chemistry, yet it is important in the study of ecology. Using the study of calcium, some simple chemical principles can be introduced such as the fact that calcium is intimately associated with carbon dioxide (CO2), as the solid calcium carbonate (CaCO3), and therefore is involved with life and life forms. -
Dolomitization
2/25/2009 Dolomitization A Short Course VU March, 2009 Peter Swart University of Miami www.aoqz76.dsl.pipex.com/ Landscapes.htm Dieudonné Sylvain Guy Tancrede de Gratet de Dolomieu usually known as Déodat de Dolomieu (Dolomieu June 23, 1750 - Chateuneuf November 28, 1801) a French geologist; the rock Dolomite was named after him. During one of his field trips to the Alps of South Tyrol (today part of northeastern Italy) he discovered a calcareous rock which, unlike limestone, did not effervesce in weak acid. He published these observations in 1791 in the Journal de Physique. The following year, in the same journal, the rock was named dolomie (or dolomite, in English) by Nicolas-Théodore de Saussure. Today both the rock and its major mineral constituent bear the name of Dolomieu, as do the Dolomites, the mountain range in northwestern Italy, where he first identified the rock. http://en.wikipedia.org/wiki/Dolomieu 1 2/25/2009 1980 1994 "Dolomite is a complicated mineral. It exhibits a wide range in the concentration of major elements and is as complex as Feldspar" (Land, 1980) 2 2/25/2009 CaMg(CO3)2 Dolomites appear to be OXYGEN between 3 to 4 per mille heavier (more O-18) than co-occuring carbonates. +3 Dolomite CARBON Calcite +1 Dolomites are about 1 per mille heavier in carbon Stable Isotopes Natural Variations UNDA 18 Oo/oo - - - - 6 2 4 0 4 8 2 12345 6 200 Bulk Dolomites 400 o 3 /oo 600 (fbmp) Depth 800 1000 1200 1400 3 2/25/2009 Experimental CaMgCO3+H3PO4=CO2+H2O+CaMgHPO4 1/2 1/4 = [CO2] [H2O][CaMgHPO4] /[CaMgCO3][H3PO4] 4 2/25/2009 -
9 Carboniferous: Extensional Basins, Advancing Deltas and Coal Swamps
Carboniferous: extensional 9 basins, advancing deltas and coal swamps C. N. WATERS & S. J. DAVIES The structural evolution of England and Wales during the Trough and Widmerpool Gulf of the East Midlands (Fig. 9.4), Carboniferous was primarily a consequence of an oblique the Craven Basin of Lancashire and Harrogate Basin of (dextral) collision between Gondwana and Laurussia (Warr Yorkshire, formed connected narrow embayments. The inter- 2000). Several phases can be recognized. The Rhenohercynian vening platforms include the linked East Midlands Shelf and Ocean opened during Early–Mid Devonian regional back-arc Derbyshire High, the Holme High, Hathern Shelf and the transtension between Avalonia and Armorica (Fig. 9.1), possi- North Wales Shelf (Fig. 9.2). These platform areas represent the bly associated with northward-directed subduction along the northern margin of the Wales–Brabant High, which formed a southern margin of Armorica. A narrow seaway floored by persistent topographical feature throughout the Carboniferous. oceanic crust developed, extending across southwest England, Along the southern margin of the Wales–Brabant High there northern France and Germany. Cessation of the subduction, is a gradual change southward from a shelf in the South Wales associated with the Ligerian orogenic phase of central Europe, and Bristol region into a deep marine back-arc seaway of the resulted from the collision of the Iberian and Armorican Culm Basin of Cornwall and Devon (Fig. 9.2), that developed microplates (Fig. 9.1). During the Late Devonian, transpressive from the Late Devonian to Silesian times (see Chapter 10). closure of this restricted ocean, associated with the Bretonian By late Dinantian time the magnitude of regional N–S exten- orogenic phase, may have occurred in response to short-lived sion had greatly reduced. -
Dolomitization of the Upper Jurassic Carbonate Rocks in the Geneva Basin, Switzerland and France
Swiss Journal of Geosciences (2018) 111:475–500 https://doi.org/10.1007/s00015-018-0311-x (012 3456789().,- volV)(0123456789().,-volV) Dolomitization of the Upper Jurassic carbonate rocks in the Geneva Basin, Switzerland and France 1 1 1 1 2 1 Yasin Makhloufi • Elme Rusillon • Maud Brentini • Andrea Moscariello • Michel Meyer • Elias Samankassou Received: 1 September 2017 / Accepted: 1 May 2018 / Published online: 30 May 2018 Ó Swiss Geological Society 2018 Abstract The Upper Jurassic carbonates represent important potential targeted reservoirs for geothermal energy in the Geneva Basin (Switzerland and France). Horizons affected by dolomitization, the focus of the present study, are of particular interest because they proved to be productive in time-equivalent deposits currently exploited in Southern Germany. The study is based on sub-surface samples and outcrops in the Geneva Basin. Petrographic analyses allowed to constrain the parage- nesis of the Upper Jurassic units prior to discussing the cause(s) and effect(s) of dolomitization. Data reveal that the facies are affected by early and late diagenesis. All samples show at least two stages of burial blocky calcite cementation with the exception of those from the sub-surface, which display an incomplete burial blocky cementation preserving primary intercrystalline porosity. Dolomitization affected all units. The results point to an early dolomitization event, under the form of replacement dolomite. Dedolomitization, through calcitization and/or dissolution, is an important process, creating secondary pore space. Results of the present study favor a reflux model for dolomitization rather than the mixing-zone model suggested in earlier work. However, considering the geodynamic context, other dolomitization models cannot be excluded for the subsurface. -
Calcium Isotopes in Scleractinian Fossil Corals Since the Mesozoic: Implications for Vital Effects and Biomineralization Through Time ∗ Anne M
Earth and Planetary Science Letters 444 (2016) 205–214 Contents lists available at ScienceDirect Earth and Planetary Science Letters www.elsevier.com/locate/epsl Calcium isotopes in scleractinian fossil corals since the Mesozoic: Implications for vital effects and biomineralization through time ∗ Anne M. Gothmann a, , Michael L. Bender a, Clara L. Blättler a, Peter K. Swart b, Sharmila J. Giri b, Jess F. Adkins c, Jarosław Stolarski d, John A. Higgins a a Princeton University, Department of Geosciences, Princeton, NJ, USA b University of Miami, Department of Marine Geosciences, Miami, FL, USA c California Institute of Technology, Division of Geological and Planetary Sciences, Pasadena, CA, USA d Institute of Paleobiology, Polish Academy of Sciences, Warsaw, Poland a r t i c l e i n f o a b s t r a c t 44/40 Article history: We present a Cenozoic record of δ Ca from well preserved scleractinian fossil corals, as well as fossil 44/40 Received 24 September 2015 coral δ Ca data from two time periods during the Mesozoic (84 and 160 Ma). To complement the Received in revised form 27 February 2016 coral data, we also extend existing bulk pelagic carbonate records back to ∼80 Ma. The same fossil Accepted 6 March 2016 corals used for this study were previously shown to be excellently preserved, and to be faithful archives Available online 7 April 2016 44/40 of past seawater Mg/Ca and Sr/Ca since ∼200 Ma (Gothmann et al., 2015). We find that the δ Ca Editor: H. Stoll compositions of bulk pelagic carbonates from ODP Site 807 (Ontong Java Plateau) and DSDP Site 516 (Rio 44/40 Keywords: Grande Rise) have not varied by more than ∼±0.20h over the last ∼80 Myr. -
Calcium Biogeochemical Cycle in a Typical Karst Forest: Evidence from Calcium Isotope Compositions
Article Calcium Biogeochemical Cycle in a Typical Karst Forest: Evidence from Calcium Isotope Compositions Guilin Han 1,* , Anton Eisenhauer 2, Jie Zeng 1 and Man Liu 1 1 Institute of Earth Sciences, China University of Geosciences (Beijing), Beijing 100083, China; [email protected] (J.Z.); [email protected] (M.L.) 2 GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Wischhofstr. 1-3, 24148 Kiel, Germany; [email protected] * Correspondence: [email protected]; Tel.: +86-10-82-323-536 Abstract: In order to better constrain calcium cycling in natural soil and in soil used for agriculture, we present the δ44/40Ca values measured in rainwater, groundwater, plants, soil, and bedrock samples from a representative karst forest in SW China. The δ44/40Ca values are found to differ by ≈3.0‰ in the karst forest ecosystem. The Ca isotope compositions and Ca contents of groundwater, rainwater, and bedrock suggest that the Ca of groundwater primarily originates from rainwater and bedrock. The δ44/40Ca values of plants are lower than that of soils, indicating the preferential uptake of light Ca isotopes by plants. The distribution of δ44/40Ca values in the soil profiles (increasing with soil depth) suggests that the recycling of crop-litter abundant with lighter Ca isotope has potential effects on soil Ca isotope composition. The soil Mg/Ca content ratio probably reflects the preferential plant uptake of Ca over Mg and the difference in soil maturity. Light Ca isotopes are more abundant 40 Citation: Han, G.; Eisenhauer, A.; in mature soils than nutrient-depleted soils. The relative abundance in the light Ca isotope ( Ca) is Zeng, J.; Liu, M. -
Dolomitization of Holocene Mg-Calcite Supratidal Deposits, Ambergris Cay, Belize
Dolomitization of Holocene Mg-calcite supratidal deposits, Ambergris Cay, Belize ^ Geological Consultants, Midland, Texas 79701 A. M. REID J J. M. GREGG St Joe Minerals Corp., Viburnum, Missouri 65566 ABSTRACT Skinner, 1957; Von der Borch and Lock, 1979; slow rates and over-all limited amounts of do- Von der Borch and others, 1964; Muir and oth- lomite found in most recent supratidal deposits Dolomitized crusts and associated sedi- ers, 1980), and the arid Persian Gulf sabkhas (Machel and Mountjoy, 1986) seemingly are in- ments 845-2925 yr old on Ambergris Cay, (Curtis and others, 1963; Illing and others, 1965; compatible with the formation of many thick Belize, Central America, compose a signifi- McKenzie and others, 1980). These dolomites sequences of ancient bedded peritidal dolomites. cant portion of the Holocene sediment section characteristically are microcrystalline, poorly An addition to the inventory of Holocene do- on many supratidal flats. The dolomitic sec- ordered and calcium-rich, and compose from a lomites described above are those crusts and as- tions are as thick as 0.7 m and contain an trace to, rarely, as much as 95%-100% of some sociated dolomitic sediments found on the average of 70% calcic dolomite. Dolomite oc- indurated supratidal crusts (Shinn and others, humid, supratidal carbonate flats on Ambergris curs as a replacement of high-Mg calcite mic- 1965; Deffeyes and others, 1965; Illing and oth- Cay in Belize, Central America (Fig. 1). Recent rite matrix and allochems, and as pas- ers, 1965), or they occur as poorly consolidated mapping has shown that supratidal dolomitiza- sively precipitated cements. -
Cellular Calcium Pathways and Isotope Fractionation in Emiliania
View metadata, citation and similar papers at core.ac.uk brought to you by CORE Cellular calcium pathways and isotope fractionation inprovided by Electronic Publication Information Center Emiliania huxleyi Nikolaus Gussone Research Centre Ocean Margins, University of Bremen, P.O. Box 330440, D-28334 Bremen, Germany Gerald Langer ⎤ Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570 Bremerhaven, Silke Thoms ⎥ Germany Gernot Nehrke ⎦ Anton Eisenhauer Leibniz Institute of Marine Sciences at the University of Kiel, Dienstgeba¨ude Ostufer, Wischhofstraße 1-3, 24148 Kiel, Germany Ulf Riebesell Leibniz Institute of Marine Sciences at the University of Kiel, Dienstgeba¨ude Westufer, Du¨sternbrooker Weg 20, 24105 Kiel, Germany Gerold Wefer Research Centre Ocean Margins, University of Bremen, P.O. Box 330440, D-28334 Bremen, Germany ABSTRACT in coccolithophores, because previous work indicates a strong kinetic 2Ϫ The marine calcifying algae Emiliania huxleyi (coccolitho- effect of the carbonate ion concentration [CO3 ] on calcium isotope 2Ϫ phores) was grown in laboratory cultures under varying conditions fractionation (Lemarchand et al., 2004). Since reduced [CO3 ] leads with respect to the environmental parameters of temperature and to a decrease in calcification rate of Emiliania huxleyi (Riebesell et al., 2؊ carbonate ion concentration [CO3 ] concentration. The Ca isotope 2000), it should also be reflected in the Ca isotopic composition of composition of E. huxleyi’s coccoliths reveals new insights the coccolith. The apparent temperature dependence on Ca isotope 2Ϫ into fractionation processes during biomineralization. The fractionation was also proposed to be caused by [CO3 ] via the temperature-dependent Ca isotope fractionation resembles previ- temperature-dependent dissociation of carbonic acid (Lemarchand et ous calibrations of inorganic and biogenic calcite and aragonite. -
Coupled Nitrogen and Calcium Cycles in Forests of the Oregon Coast Range
Ecosystems (2006) 9: 63–74 DOI: 10.1007/s10021-004-0039-5 Coupled Nitrogen and Calcium Cycles in Forests of the Oregon Coast Range Steven S. Perakis,1,2* Douglas A. Maguire,2 Thomas D. Bullen,3 Kermit Cromack,2 Richard H. Waring,2 and James R. Boyle2 1US Geological Survey, Forest and Rangeland Ecosystem Science Center, Corvallis, Oregon 97331, USA; 2Department of Forest Science, Oregon State University, Corvallis, Oregon 97333, USA; 3US Geological Survey, Branch of Regional Research, Water Resources Discipline, Menlo Park, California 94025, USA ABSTRACT Nitrogen (N) is a critical limiting nutrient that concentrations are highly sensitive to variations in regulates plant productivity and the cycling of soil Ca across our sites. Natural abundance calcium other essential elements in forests. We measured isotopes (d44Ca) in exchangeable and acid leach- foliar and soil nutrients in 22 young Douglas-fir able pools of surface soil measured at a single site stands in the Oregon Coast Range to examine showed 1 per mil depletion relative to deep soil, patterns of nutrient availability across a gradient of suggesting strong Ca recycling to meet tree de- N-poor to N-rich soils. N in surface mineral soil mands. Overall, the biogeochemical response of ranged from 0.15 to 1.05% N, and was positively these Douglas-fir forests to gradients in soil N is related to a doubling of foliar N across sites. Foliar N similar to changes associated with chronic N in half of the sites exceeded 1.4% N, which is deposition in more polluted temperate regions, and considered above the threshold of N-limitation in raises the possibility that Ca may be deficient on coastal Oregon Douglas-fir. -
1 Constraining Calcium Isotope Fractionation (Δ44/40Ca) in Modern and Fossil Scleractinian Coral Skeleton
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by OceanRep Constraining calcium isotope fractionation (δ44/40Ca) in modern and fossil scleractinian coral skeleton. Pretet Chloé, Samankassou Elias, Felis Thomas, Reynaud Stéphanie, Böhm Florian, Eisenhauer Anton, Ferrier-Pagès Christine, Gattuso Jean-Pierre, Camoin Gilbert Preprint Chemical Geology doi : 10.1016/j.chemgeo.2012.12.006 in press December, 19, 2012 1 Constraining calcium isotope fractionation (δ44/40Ca) in modern and fossil scleractinian coral skeleton. Pretet Chloé1, Samankassou Elias1, Felis Thomas2, Reynaud Stéphanie3, Böhm Florian4, Eisenhauer Anton4, Ferrier-Pagès Christine3, Gattuso Jean-Pierre5, Camoin Gilbert6 1: Section of Earth and Environmental Sciences, University of Geneva, Rue des Maraîchers 13, CH-1205 Geneva, Switzerland 2: MARUM, Center for Marine Environmental Sciences, University of Bremen, 28359 Bremen, Germany 3: Centre Scientifique de Monaco, Avenue Saint-Martin, 98000, Monaco 4: Helmholtz Zentrum für Ozeanforschung (GEOMAR), Wischhofstr. 1-3, 24148 Kiel, Germany 5: Université Pierre et Marie Curie-Paris 6, Observatoire Océanologique de Villefranche, 06230 Villefranche-sur-Mer, France / CNRS-INSU, Laboratoire d'Océanographie de Villefranche, BP 28, 06234 Villefranche sur-Mer Cedex, France 6 : CEREGE, UMR 6635, CNRS, BP 80, F-13545 Aix en Provence cedex 4, France 2 Abstract The present study investigates the influence of environmental (temperature, salinity) and biological (growth rate, inter-generic variations) parameters on calcium isotope fractionation (δ44/40Ca) in scleractinian coral skeleton to better constrain this record. Previous studies focused on the δ44/40Ca record in different marine organisms to reconstruct seawater composition or temperature, but only few studies investigated corals. -
University of Southampton Research Repository Eprints Soton
University of Southampton Research Repository ePrints Soton Copyright © and Moral Rights for this thesis are retained by the author and/or other copyright owners. A copy can be downloaded for personal non-commercial research or study, without prior permission or charge. This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the copyright holder/s. The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the copyright holders. When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given e.g. AUTHOR (year of submission) "Full thesis title", University of Southampton, name of the University School or Department, PhD Thesis, pagination http://eprints.soton.ac.uk UNIVERSITY OF SOUTHAMPTON FACULTY OF NATURAL AND ENVIRONMENTAL SCIENCES Ocean and Earth Sciences Investigating the drivers of perturbations to the Cenozoic carbon-climate system by David Ian Armstrong McKay Thesis for the degree of Doctor of Philosophy August 2015 UNIVERSITY OF SOUTHAMPTON ABSTRACT FACULTY OF NATURAL AND ENVIRONMENTAL SCIENCES Ocean and Earth Sciences Thesis for the degree of Doctor of Philosophy INVESTIGATING THE DRIVERS OF PERTURBATIONS TO THE CENOZOIC CARBON-CLIMATE SYSTEM David Ian Armstrong McKay Over the course of the Cenozoic the Earth system has shifted from a CO2-rich ‘Greenhouse’ climate state to a CO2-poor ‘Icehouse’ climate state. This trend is punctuated by numerous perturbations to the carbon-climate system, but the extent of the coupling between the carbon cycle and climate system, the drivers of these perturbations, and their relationship to the longer-term Cenozoic trend is still debated.