Teleostei: Characiformes: Characidae)
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Phylogenetic Relationships Within the Speciose Family Characidae
Oliveira et al. BMC Evolutionary Biology 2011, 11:275 http://www.biomedcentral.com/1471-2148/11/275 RESEARCH ARTICLE Open Access Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling Claudio Oliveira1*, Gleisy S Avelino1, Kelly T Abe1, Tatiane C Mariguela1, Ricardo C Benine1, Guillermo Ortí2, Richard P Vari3 and Ricardo M Corrêa e Castro4 Abstract Background: With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical freshwater ecosystems. The composition, phylogeny, and classification of Characidae is currently uncertain, despite significant efforts based on analysis of morphological and molecular data. No consensus about the monophyly of this group or its position within the order Characiformes has been reached, challenged by the fact that many key studies to date have non-overlapping taxonomic representation and focus only on subsets of this diversity. Results: In the present study we propose a new definition of the family Characidae and a hypothesis of relationships for the Characiformes based on phylogenetic analysis of DNA sequences of two mitochondrial and three nuclear genes (4,680 base pairs). The sequences were obtained from 211 samples representing 166 genera distributed among all 18 recognized families in the order Characiformes, all 14 recognized subfamilies in the Characidae, plus 56 of the genera so far considered incertae sedis in the Characidae. The phylogeny obtained is robust, with most lineages significantly supported by posterior probabilities in Bayesian analysis, and high bootstrap values from maximum likelihood and parsimony analyses. -
Information Sheet on Ramsar Wetlands (RIS) – 2009-2012 Version Available for Download From
Information Sheet on Ramsar Wetlands (RIS) – 2009-2012 version Available for download from http://www.ramsar.org/ris/key_ris_index.htm. Categories approved by Recommendation 4.7 (1990), as amended by Resolution VIII.13 of the 8th Conference of the Contracting Parties (2002) and Resolutions IX.1 Annex B, IX.6, IX.21 and IX. 22 of the 9th Conference of the Contracting Parties (2005). Notes for compilers: 1. The RIS should be completed in accordance with the attached Explanatory Notes and Guidelines for completing the Information Sheet on Ramsar Wetlands. Compilers are strongly advised to read this guidance before filling in the RIS. 2. Further information and guidance in support of Ramsar site designations are provided in the Strategic Framework and guidelines for the future development of the List of Wetlands of International Importance (Ramsar Wise Use Handbook 14, 3rd edition). A 4th edition of the Handbook is in preparation and will be available in 2009. 3. Once completed, the RIS (and accompanying map(s)) should be submitted to the Ramsar Secretariat. Compilers should provide an electronic (MS Word) copy of the RIS and, where possible, digital copies of all maps. 1. Name and address of the compiler of this form: FOR OFFICE USE ONLY. DD MM YY Beatriz de Aquino Ribeiro - Bióloga - Analista Ambiental / [email protected], (95) Designation date Site Reference Number 99136-0940. Antonio Lisboa - Geógrafo - MSc. Biogeografia - Analista Ambiental / [email protected], (95) 99137-1192. Instituto Chico Mendes de Conservação da Biodiversidade - ICMBio Rua Alfredo Cruz, 283, Centro, Boa Vista -RR. CEP: 69.301-140 2. -
From Rio Grande Do Norte State, Northeastern Brazil
Neotropical Ichthyology, 12(2): 301-308, 2014 Copyright © 2014 Sociedade Brasileira de Ictiologia DOI: 10.1590/1982-0224-20130218 A new species of Serrapinnus Malabarba, 1998 (Characidae: Cheirodontinae) from Rio Grande do Norte State, northeastern Brazil Fernando C. Jerep1,2 and Luiz R. Malabarba3 Serrapinnus potiguar, new species, is described from the rio Ceará-Mirim, a coastal drainage in the Rio Grande do Norte State, northeastern Brazil. The new species is distinguished from the other species of the genus by the shape and arrangement of the ventral procurrent caudal-fin rays of the sexually dimorphic males; where the hypertrophied elements present the shape of a series of scimitars arranged radially, forming a semi-circle on the ventral margin of the caudal peduncle. Furthermore, the new species is diagnosed from S. heterodon and S. piaba, sympatric congeners from the northeastern Brazilian drainages, respectively by the presence of incomplete lateral line and teeth bearing at most five cusps. Serrapinnus potiguar, espécie nova, é descrita para o rio Ceará-Mirim, uma drenagem costeira localizada no estado do Rio Grande do Norte, na região Nordeste do Brasil. A espécie nova distingue-se das demais espécies do gênero pela forma e arranjo dos raios procorrentes ventrais da nadadeira caudal nos machos sexualmente dimórficos; onde os elementos hipertrofiados possuem o formato de uma série de cimitarras arranjados radialmente na margem ventral do pedúnculo caudal, formando um semicírculo. Adicionalmente, a nova espécie diferencia-se de S. heterodon e S. piaba, congêneres simpátricos para as drenagens do Nordeste brasileiro, respectivamente pela presença de linha lateral incompleta e dentes com no máximo cinco cúspides. -
Characiformes: Characidae)
FERNANDA ELISA WEISS SISTEMÁTICA E TAXONOMIA DE HYPHESSOBRYCON LUETKENII (BOULENGER, 1887) (CHARACIFORMES: CHARACIDAE) Tese apresentada ao Programa de Pós-Graduação em Biologia Animal, Instituto de Biociências da Universidade Federal do Rio Grande do Sul, como requisito parcial à obtenção do Título de Doutora em Biologia Animal. Área de Concentração: Biologia Comparada Orientador: Prof. Dr. Luiz Roberto Malabarba Universidade Federal do Rio Grande do Sul Porto Alegre 2013 Sistemática e Taxonomia de Hyphessobrycon luetkenii (Boulenger, 1887) (Characiformes: Characidae) Fernanda Elisa Weiss Aprovada em ___________________________ ___________________________________ Dr. Edson H. L. Pereira ___________________________________ Dr. Fernando C. Jerep ___________________________________ Dra. Maria Claudia de S. L. Malabarba ___________________________________ Dr. Luiz Roberto Malabarba Orientador i Aos meus pais, Nelson Weiss e Marli Gottems; minha irmã, Camila Weiss e ao meu sobrinho amado, Leonardo Weiss Dutra. ii Aviso Este trabalho é parte integrante dos requerimentos necessários à obtenção do título de doutor em Zoologia, e como tal, não deve ser vista como uma publicação no senso do Código Internacional de Nomenclatura Zoológica (artigo 9) (apesar de disponível publicamente sem restrições) e, portanto, quaisquer atos nomenclaturais nela contidos tornam-se sem efeito para os princípios de prioridade e homonímia. Desta forma, quaisquer informações inéditas, opiniões e hipóteses, bem como nomes novos, não estão disponíveis na literatura zoológica. -
Downloaded from NCBI Genbank (Benson Et Al
THE UNIVERSITY OF CHICAGO EVOLUTION IN FRESH WATERS DURING THE GREAT AMERICAN INTERCHANGE A DISSERTATION SUBMITTED TO THE FACULTY OF THE DIVISION OF THE BIOLOGICAL SCIENCES AND THE PRITZKER SCHOOL OF MEDICINE IN CANDIDACY FOR THE DEGREE OF DOCTOR OF PHILOSOPHY COMMITTEE ON EVOLUTIONARY BIOLOGY BY TIMOTHY SOSA CHICAGO, ILLINOIS DECEMBER 2017 Table of Contents List of Tables . iii List of Figures . iv Acknowledgments . vi Chapter 1: Introduction . 1 Chapter 2: Broadly sampled phylogeny of Characiformes reveals repeated colonization of North America and paraphyly of Characiformes sensu stricto . 8 Chapter 3: No evidence for filtering of eco-morphology in characiform lineages during the Great American Interchange . 17 Chapter 4: Both elevation and species identity strongly predict body shape in Astyanax tetras . 27 Chapter 5: Diet may mediate potential range expansions of Neotropical fishes under climate change . 39 Chapter 6: Discussion . 52 References . 57 Appendix: List of specimens newly sequenced for this study . 67 ii List of Tables 1.1 Recognized families in the order Characiformes . 5 2.1 Fossil occurrences used for time-calibration . 11 4.1 Distances in morphospace among tetra populations . 32 5.1 Variables determining the range limits of Astyanax . 45 5.2 Variables determining the range limits of Brycon . 47 5.3 Variables determining the range limits of Roeboides . 49 iii List of Figures 1.1 Hypothetical relationships among ostariophysan groups . 4 2.1 Phylogeny of Characiformes as inferred from myh6 locus . 13 3.1 Landmark configuration for geometric morphometrics . 19 3.2 Morphospace occupation in North and South American characins . 21 3.3 Deformation grids showing axes of shape variation among characins . -
Fernanda Antunes Alves Da Costa
FERNANDA ANTUNES ALVES DA COSTA Isolamento e caracterização de DETs ( Differentially Expressed Transcripts ) em espécies de peixes: Leporinus macrocephalus (Characiformes) e Danio rerio (Cypriniformes) Tese apresentada ao Instituto de Biociências da Universidade Estadual Paulista “Júlio de Mesquita Filho”, Campus de Botucatu, para obtenção do título de Doutor em Ciências Biológicas - Genética Orientadora: Adriane Pinto Wasko Botucatu - SP 2008 Livros Grátis http://www.livrosgratis.com.br Milhares de livros grátis para download. 2 FICHA CATALOGRÁFICA ELABORADA PELA SEÇÃO DE AQUIS. E TRAT. DA INFORMAÇÃO DIVISÃO TÉCNICA DE BIBLIOTECA E DOCUMENTAÇÃO - CAMPUS DE BOTUCATU - UNESP BIBLIOTECÁRIA RESPONSÁVEL: ROSEMEIRE APARECIDA VICENTE Costa, Fernanda Antunes Alves da. Isolamento e caracterização de DETs (Differentially Expressed Transcripts) em espécies de peixes: Leporinus macrocephalus (Characiformes) e Danio rerio (Cypriniformes) / Fernanda Antunes Alves da Costa. – Botucatu : [s.n.], 2008 Tese (doutorado) – Instituto de Biociências de Botucatu, Universidade Estadual Paulista, 2008. Orientador: Profª. Drª Adriane Pinto Wasko Assunto CAPES: 20200005 1. Genética. 2. Peixes. 3. Actina. CDD 597.55 Palavras-chave: Actina; Danio rerio ; DETs; Fabp6; Leporinus macrocephalus. 3 ... Quando paramos de aprender e de progredir, começamos a morrer realmente... C. Torres Pastorino Aos meus pais, José Maria e Cecília e ao meu esposo, Rogério, que me amam e me compreendem, sempre me apoiando em todos os grandes e pequenos passos do nosso caminho. À minha querida orientadora, Adriane, exemplo de pessoa e profissional. 4 AGRADECIMENTOS Agradeço a todos que contribuíram direta ou indiretamente à realização deste trabalho, em especial: À minha orientadora, Profa. Dra. Adriane Pinto Wasko, pela confiança, orientação e dedicação oferecidas para elaboração e conclusão deste trabalho e para minha formação profissional; À FAPESP – Fundação de Amparo à Pesquisa do Estado de São Paulo, pelo apoio financeiro concedido; Aos Profs. -
Reproductive Characteristics of Characid Fish Species (Teleostei
Reproductive characteristics of characid fish species (Teleostei... 469 Reproductive characteristics of characid fish species (Teleostei, Characiformes) and their relationship with body size and phylogeny Marco A. Azevedo Setor de Ictiologia, Museu de Ciências Naturais, Fundação Zoobotânica do Rio Grande do Sul, Rua Dr. Salvador França, 1427, 90690-000 Porto Alegre, RS, Brazil. ([email protected]) ABSTRACT. In this study, I investigated the reproductive biology of fish species from the family Characidae of the order Characiformes. I also investigated the relationship between reproductive biology and body weight and interpreted this relationship in a phylogenetic context. The results of the present study contribute to the understanding of the evolution of the reproductive strategies present in the species of this family. Most larger characid species and other characiforms exhibit a reproductive pattern that is generally characterized by a short seasonal reproductive period that lasts one to three months, between September and April. This is accompanied by total spawning, an extremely high fecundity, and, in many species, a reproductive migration. Many species with lower fecundity exhibit some form of parental care. Although reduction in body size may represent an adaptive advantage, it may also require evolutionary responses to new biological problems that arise. In terms of reproduction, smaller species have a tendency to reduce the number of oocytes that they produce. Many small characids have a reproductive pattern similar to that of larger characiforms. On the other hand they may also exhibit a range of modifications that possibly relate to the decrease in body size and the consequent reduction in fecundity. -
Teleostei: Characiformes) with a Discussion on the Diagnosis of the Genus
Neotropical Ichthyology, 11(4):767-778, 2013 Copyright © 2013 Sociedade Brasileira de Ictiologia A new species of the characid genus Hollandichthys Eigenmann from coastal rivers of southern Brazil (Teleostei: Characiformes) with a discussion on the diagnosis of the genus Vinicius A. Bertaco1 and Luiz R. Malabarba2 Hollandichthys taramandahy, new species, is described from the rio Tramandaí, rio Mampituba, and rio Araranguá basins, coastal drainages of Rio Grande do Sul and Santa Catarina States, Brazil. The new species is distinguished from H. multifasciatus, the single recognized species of the genus, by the presence of a small black spot covering the base of median caudal-fin rays, by the lower number of dorsal and ventral procurrent caudal-fin rays, by the absence of a black spot located along anterior half of adipose-fin, and by the absence of humeral spot in specimens larger than 60 mm of standard length. Comments about the geographic distribution and diagnosis are provided for the genus. Hollandichthys taramandahy, espécie nova, é descrita para as bacias dos rios Tramandaí, Mampituba e Araranguá, drenagens costeiras dos estados do Rio Grande do Sul e Santa Catarina, Brasil. A espécie nova distingui-se de H. multifasciatus, a única espécie reconhecida do gênero, pela presença de uma pequena mancha preta cobrindo a base dos raios medianos da nadadeira caudal, pelo menor número de raios procorrentes dorsais e ventrais da nadadeira caudal, pela ausência de uma mancha preta na metade anterior da nadadeira adiposa e pela ausência de mancha umeral em exemplares maiores de 60 mm de comprimento padrão. Comentários sobre a distribuição geográfica e diagnose são apresentados para o gênero. -
Redalyc.Checklist of the Freshwater Fishes of Colombia
Biota Colombiana ISSN: 0124-5376 [email protected] Instituto de Investigación de Recursos Biológicos "Alexander von Humboldt" Colombia Maldonado-Ocampo, Javier A.; Vari, Richard P.; Saulo Usma, José Checklist of the Freshwater Fishes of Colombia Biota Colombiana, vol. 9, núm. 2, 2008, pp. 143-237 Instituto de Investigación de Recursos Biológicos "Alexander von Humboldt" Bogotá, Colombia Available in: http://www.redalyc.org/articulo.oa?id=49120960001 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Biota Colombiana 9 (2) 143 - 237, 2008 Checklist of the Freshwater Fishes of Colombia Javier A. Maldonado-Ocampo1; Richard P. Vari2; José Saulo Usma3 1 Investigador Asociado, curador encargado colección de peces de agua dulce, Instituto de Investigación de Recursos Biológicos Alexander von Humboldt. Claustro de San Agustín, Villa de Leyva, Boyacá, Colombia. Dirección actual: Universidade Federal do Rio de Janeiro, Museu Nacional, Departamento de Vertebrados, Quinta da Boa Vista, 20940- 040 Rio de Janeiro, RJ, Brasil. [email protected] 2 Division of Fishes, Department of Vertebrate Zoology, MRC--159, National Museum of Natural History, PO Box 37012, Smithsonian Institution, Washington, D.C. 20013—7012. [email protected] 3 Coordinador Programa Ecosistemas de Agua Dulce WWF Colombia. Calle 61 No 3 A 26, Bogotá D.C., Colombia. [email protected] Abstract Data derived from the literature supplemented by examination of specimens in collections show that 1435 species of native fishes live in the freshwaters of Colombia. -
Biological Inventories P Rapid
biological R Rapid Biological Inventories apid Biological Inventories rapid inventories 11 Instituciones Participantes / Participating Institutions :11 The Field Museum Perú: Yavarí Centro de Conservación, Investigación y Manejo de Perú: Yavarí Áreas Naturales (CIMA–Cordillera Azul) Wildlife Conservation Society–Peru Durrell Institute of Conservation and Ecology Rainforest Conservation Fund Museo de Historia Natural de la Universidad Nacional Mayor de San Marcos Financiado por / Partial funding by Gordon and Betty Moore Foundation The Field Museum Environmental & Conservation Programs 1400 South Lake Shore Drive Chicago, Illinois 60605-2496, USA T 312.665.7430 F 312.665.7433 www.fieldmuseum.org/rbi THE FIELD MUSEUM PERÚ: Yavarí fig.2 La planicie aluvial del Yavarí es un rico mosaico de bosques inundados y pantanos. Las comunidades de árboles de la reserva propuesta (línea punteada en blanco) se encuentran entre las más diversas del planeta. En esta imagen compuesta de satélite (1999/2001) resaltamos la Reserva Comunal Tamshiyacu-Tahuayo (línea punteada en gris) junto con los ríos y pueblos cercanos a los sitios del inventario biológico rápido. The Yavarí floodplain is a rich mosaic of flooded forest and swamps. Tree communities of the proposed reserve (dotted white line) are among the most diverse on the planet. In this composite satellite image of 1999/2001 we highlight the Reserva Comunal Tamshiyacu-Tahuayo (dotted grey line) along with the rivers and towns close to the rapid inventory sites. Iquitos río Manití río Orosa río Esperanza -
Xenurobryconin Phylogeny and Putative Pheromone Pumps in Glandulocaudine Fishes (Teleostei: Characidae)
Xenurobryconin Phylogeny and Putative Pheromone Pumps in Glandulocaudine Fishes (Teleostei: Characidae) STANLEY H. WEITZMAN and SARA V. FINK m SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 421 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Folklife Studies Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world of science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs'submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
Ten Complete Mitochondrial Genomes of Gymnocharacini
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.26.355867; this version posted October 26, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Ten complete mitochondrial genomes of Gymnocharacini (Stethaprioninae, Characiformes): evolutionary relationships and a repetitive element in the Control Region (D-loop) 1,3 2 1 Rubens Pasa , Fabiano Bezerra Menegídio , Igor Henrique Rodrigues-Oliveira , 1 1 Iuri Batista da Silva , Matheus Lewi Cruz Bonaccorsi de Campos , Dinaíza Abadia 1 4 4 Rocha-Reis , John Seymour (Pat) Heslop-Harrison , Trude Schwarzacher , Karine Frehner Kavalco1,3 Corresponding author: Rubens Pasa1,3 E-mail: [email protected] Phone: +55 (34) 99773-8285 Postal Adress: Federal University of Viçosa, Route MG 230, km 7, LAE Building, room 101. Zip code 38810-000, Rio Paranaíba, MG, Brazil. 1 Laboratory of Ecological and Evolutionary Genetics, Federal University of Viçosa, campus Rio Paranaíba, Rio Paranaíba, Brazil. 2 Integrated Nucleus of Biotechnology, University of Mogi das Cruzes, Brazil. 3 Laboratory of Bioinformatics and Genomics, Federal University of Viçosa, campus Rio Paranaíba, Brazil. 4 Department of Genetics and Genome Biology, University of Leicester, United Kingdom. Declaration of Interest: none bioRxiv preprint doi: https://doi.org/10.1101/2020.10.26.355867; this version posted October 26, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract We are presenting the complete mitogenomes of eight fish species/cytotypes from Neotropical region belonging to the Astyanax and Psalidodon genus: A.