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P R A U R T LT MENT OF AGRICU Forest Service PNW Pacific Northwest Research Station

Inside Wanted: Base Cations...... 2 Machine Learning...... 4 Models Helping Models...... 5 FINDINGS issue one hundred seventy five / july 2015 “Science affects the way we think together.” Lewis Thomas

Sour Streams in : Mapping Nature’s Buffer Against Sulfur Deposition

IN SUMMARY Even while emissions are in decline, sul-

CherylDevlin fur released into the air primarily by coal- and oil-burning power plants con- tinues to acidify streams in the , stressing vegetation and harming aquatic life. Watersheds rich in base cations—nutrients that attract and bind acidic molecules—naturally buf- fer streams against acidification. These watersheds can be identified by their soils, vegetation, and other physical properties. Mitigating stream acidification depends on knowing how much sulfuric acid falls on a landscape over time, but also on accu- rate predictions of base cation weathering (BCw) rates in watersheds. However, pre- vious models lack the accuracy to predict BCw rates across large . Accurate predictions are needed to inform policy and management decisions.

Sulfur emissions are regulated by the Environmental Protection Agency, but sulfuric acid that has Using a machine learning approach, leached into soil and streams can linger in the environment and harm vegetation and aquatic life. Some scientists with the U.S. Forest Service watersheds are better able to buffer streams against acidification than others; scientists learned why in Pacific Northwest Research Station devel- southern Appalachia. Above, a stream in the Cherokee National Forest. oped a model that predicts and maps BCw rates in the southern Appalachian Moun- “I believe that there is a learning, with some relief and embarrassment, tains. The model made better predictions than traditionally used linear regression subtle magnetism in Nature, that it wasn’t quite the zombie apocalypse they’d imagined. Others recall that acid is methods, and confirmed many findings which, if we unconsciously yield to vaguely connected to dirty air. of prior empirical studies. The study also it, will direct us aright.” found that BCw rates were influenced by —Henry David Thoreau But say “acid rain” to someone who has vis- other climatic variables, such as precipi- ited or lived near the southern Appalachian tation and temperature. Results are being ay the words “acid rain,” and you get Mountains, and they have stronger memories. used to support sulfur critical loads mod- mixed reactions. Maybe a blank stare These include images of dying spruce and fir eling throughout the . as someone imagines ghastly images of trees, conversations about dead trout in moun- S tain streams, or amidst smog-obscured melting umbrellas and singed flesh. Those old enough, remember hearing it during the late vistas anywhere in the rugged chain of moun- 1970s and into the 1990s. And, they remember tains and valleys from Georgia to Pennsylvania. Acid rain and dirty air were big news. Heavy smog from factories and power plants lingered KEY FINDINGS in the Appalachian skies. The haze was so bad it reduced visibility in the Smoky Mountains • The model reduced error rates by nearly half, compared to linear regression models. from 90 miles to 20 miles. “People don’t realize that at times, the air quality is actu- • It confirmed established relationships between base cation weathering (BCw) rates and ally worse in the park than where they came watershed soils, geology, sulfur deposition, and vegetation conditions. from,” reporters quoted a Park Service scien- tist in 1996. Researchers and the public were • BCw rates were also influenced by other climatic variables such as precipitation and only beginning to understand the connections temperature. between the smog, dead fish, the dying trees, and rain sometimes as acidic as vinegar. • The model predicted low BCw in watersheds whose parent material was high in silica; Since then, scientists have confirmed that received little precipitation; had soils that were low in clay, nitrogen, and organic mat- power plants typically burning coal release ter; and had low to moderate forest cover. sulfur into the atmosphere, which turns into sulfuric acid by the time it settles on the • BCw drivers were consistent across the study area, except for the central Appalachians, ground. It falls not just as acid rain, but also as where high sulfur deposition and unique geology and climate may influence snow or as dry particles. Sometimes it hangs predictions. near mountain ridges, aloft in acidic clouds. Or it hugs the ground in acidic fog. Acting on a request by the Environmental river in , descend from high But scientists have also realized that some Protection Agency (EPA), Forest Service sci- mountain peaks and rocky outcrops. landscapes have built-in buffers against acid- entists Keith Reynolds, Paul Hessburg, and “The EPA and the national forests want to ity. Certain watersheds are rich in calcium, Nicholas Povak built new computer models know—when and where mitigations are magnesium, potassium, or sodium: base to identify these vulnerable watersheds in the needed—before the fish and the bugs that they nutrients that can neutralize acids and help Southern Appalachian Mountain Region. The eat are in trouble,” Hessburg says. To accom- plants grow. Streams flowing from some of area is home to a captivating array of species, plish this, the researchers are trying out new these watersheds can remain healthy in spite including native brook trout, bog turtles and predictive modeling techniques that combine of current or future acid rain or snow events. black bears, and encompasses seven national computer algorithms, artificial intelligence, Watersheds that don’t have a lot of these nutri- forests and two national parks. Streams and and brute data crunching. ents are sitting ducks. rivers, including the New River, the oldest

WANTED: BASE CATIONS he heart of the project concerns base cations, another name for nutrients Purpose of PNW Science Findings that have the power to neutralize acids. To provide scientific information to people who

T BillJackson When rocks weather and become soil, they make and influence decisions about managing release certain elements and minerals that can land. either be acidic or basic. “For example, basic PNW Science Findings is published monthly by: compounds come from limestone,” Hessburg says. “Calcareous deposits release calcium and Pacific Northwest Research Station other minerals that can neutralize acids.” USDA Forest Service P.O. Box 3890 The scientists wanted to map the rates at Portland, 97208 which base cations break down and are Send new subscriptions and change of address released into soils and streams in the southern information to: Appalachians. The process, called base cation [email protected] weathering or BCw, is one of the most impor- tant yet difficult to estimate parameters in Rhonda Mazza, editor; [email protected] calculating a landscape’s critical load. When Cheryl Jennings, layout; [email protected] an area’s critical load of sulfur deposition is Science Findings is online at: http://www. surpassed, harmful effects begin to take a toll fs.fed.us/pnw/publications/scifi.shtml on the environment. To receive this publication electronically, Scientists traditionally estimate BCw by col- change your delivery preference here: lecting stream and soil samples, analyzing http://www.fs.fed.us/pnw/publications/subscription. their chemical composition, and running shmtl the data through complex computer models. A technician collects a water sample from the These “process-based” models require a large Cherokee National Forest that will be tested for United States levels of sulfuric acid. Forest Department Service amount of field-collected data and long pro- of Agriculture cessing times, and they provide predictions that are only relevant to the individual water- sheds where the data were collected. This

2 makes the analysis of a region as big as the southern both time- consuming and a costly process. But, resource managers need to make decisions about large Dodd Brady landscapes, not just individual watersheds. Recently, scientists have quantified the sta- tistical relationships between process model estimates and environmental data, which are readily available across large geographic areas. These relations can be used to predict BCw rates across the region. Initial models used a statistical analysis approach called linear regression, which models the relations between two variables by fitting a linear equa- tion to the observed data.

Povak says, “If your response variable is BCw rate and your environmental driving variable is South Appalachian brook trout thrive in fast-moving, cold water streams. The the percentage of watershed area dominated by region’s brook trout populations were severely reduced in the early 1980s. Sulfur siliceous (silica bearing) bedrock, which contrib- leaching into mountain streams made the water too acidic for the fish. utes little to BCw, then a linear model assumes that BCw rates decrease in a linear fashion with increased percent siliceous bedrock.” Unfortunately, relations between environmen- tal variables can be nonlinear and complex.

And indeed, the researchers found that the Povaket al. 2014 relationship between BCw rate and siliceous bedrock was nonlinear. “When you have low levels of a siliceous rock, you can get really high levels of BCw, but up to a point,” Povak says. “When you hit about 15 percent, you see a huge decrease in BCw rates. After this threshold is reached, the effect of additional silica on reducing BCw rates is minimal.” When you model complex relationships with linear regression, you can get errors. Sometimes, very large errors. A final challenge the researchers ran into was in the data sampling. “There was a lot of data in locations where people expected that native fish and aquatic insects might be in trouble; local knowledge was quite good,” Hessburg says. “But there was much less data in areas where people did not expect to find problems. From a statistical prediction perspective, this imbalanced sampling can complicate model prediction. Ideally, you want to have data rela- tively well distributed across a sampled region.” There was a wealth of observed stream, soil, and atmospheric deposition data from other studies, taken from 140 different watersheds in the region. The researchers derived BCw rates for these watersheds using the process- based Model of Acidification of Groundwater in Catchments (MAGIC). They now needed a new model that would take this data, and com- bine it with data from the rest of the region’s geography, climate, and sulfur deposition, to This figure shows the locations of base cation weathering (BC ) sample points in the southern generate a continuous map of BCw rates for w the rest of the region’s watersheds. Appalachian Mountains. Forest Service scientists used the BCw data to develop a model that maps out BCw rate predictions over the whole area; information needed by resource managers.

3 MACHINE LEARNING o accomplish this, the researchers used variables—something that the linear regres- low in base cations. Low rates were also pre- an approach called machine learning, a sion models were quite poor at. “Linear dicted in small watersheds, with naturally kind of automated reasoning relatively regression models are very powerful in the acidic soils, that were low in clay, nitrogen, T right applications, but they assume that you and organic matter, and watersheds with low new to ecological research. The approach involves the construction of computer algo- have these very linear relationships between to moderate forest cover. rithms that can learn from the patterns detect- variables,” Povak says. They also found that BCw rates were influ- ed in data. The algorithms are used to build a Statistical models that could capture the com- enced by other climatic variables such as model from example inputs, and this resulting plex nonlinear relationships between sulfur precipitation and temperature, and this result model is used to make predictions. Because deposition and environmental variables in this was intuitive. Rain speeds up weathering Reynolds (a research forester), Hessburg, and case did a better job of identifying sensitive in soils and rocks. Warmer temperatures Povak (research ecologists) were not experts ecosystems. Because of this flexibility, the speed up chemical reactions and soil respi- in atmospheric or stream water chemistry, machine learning models reduced error rates ration. Overall, the models found that BCw they relied on colleagues who were experts to by nearly half. “That was a real breakthrough rates across much the southern Appalachian help them refine their algorithms. for us,” Povak says. The machine learning Mountains were inherently low. approach also addressed their less-than-ideal The researchers pitted several conventional “The statistical modeling went through an data sampling, and they were able to identify linear regression models against machine indepth comparison of about a half dozen zones of high uncertainty that resulted from learning models. They used BCw rate as the modeling techniques, to see which one would low sampling. response variable, and aspects of the underly- produce the best modeling result with the ing geology, soils, geomorphology, climate, Their model results confirmed other studies lowest error rate,” Hessburg says. “It took topography, and acidic deposition rates as pre- on established relationships between BCw several to get all the products through dictor or driving variables. rates and watershed soils, geology, sulfur the assembly line.” In the end they chose the They found that the machine learning algo- deposition, and vegetation. For example, low random forest model, which performed the rithms were flexible and could model all types BCw rates were predicted in watersheds whose best, to successfully map BCw rates in the of relationships and interactions among the parent material was high in silica, a compound study region. Povaket al. 2014

The figure on the left shows a continuous surface of predicted base cation weathering (BCw) rates. Orange marks areas with the lowest BCw rates; these are the most vulnerable to sulfur deposition and acidification. High-elevation areas (above 2,500 feet) are vulnerable to sulfur deposition because these are frequently exposed to acidic clouds. Soils in these areas are insufficient to buffer sulfuric acid inputs. The figure on the right shows the standard deviation of predictions from the final model. Areas in darker red show higher uncertainty of BCw predictions.

4 MODELS HELPING MODELS LAND MANAGEMENT IMPLICATIONS he base cation weathering pre- diction was just the middle of a • Model results significantly refine prior base cation weathering rate estimates and can continuum,” Reynolds says. The be used in policy discussions on pollution sources, air and water quality regulation, “T and water quality mitigation associated with acidified streams. model they developed for predicting BCw rates was used alongside another model they developed that predicted stream water acid- • The model has been used along with predicted stream water acid neutralizing capacity neutralizing capacity to then estimate critical to identify watersheds where sulfur deposition levels will likely lead to long-term detri- loads of acidic sulfur deposition. These criti- mental effects on aquatic organisms. This information has been incorporated into a for- cal load estimates were then used within a est plan assessment and an environmental assessment for proposed land management customized decision support tool, designed by actions. the researchers and their collaborators. • Results are being used in a customized decision support tool to assess the consequences “The decision support tool does a strategic of increased acidification on native and nonnative fish and aquatic invertebrates within evaluation of the landscape,” Reynolds says. study area watersheds. “The predictions of critical loads, BCw, and stream water acidity were used to make pre- • National forest managers and Environmental Protection Agency regulators in the study dictions about potential biological impacts region have used the critical load and biotic impact predictions to monitor aquatic habitat on fish and aquatic insects. The modeling to and plan mitigation for acidified watersheds and streams. improve BCw predictions was fundamental to that entire process.” Reynolds continues, “The complete tool can help resource managers says. “Removing trees also removes base cat- Hessburg says the tool can be readily adapted assess the effects of increased sulfur deposi- ions from the watershed.” The results from the to other regions where resource managers tion on native and nonnative fish and aquatic tool also alert him to areas where more data need accurate critical load estimates over invertebrates within the watersheds.” are needed. “If we want to manage a region large areas. “One of the most exciting things National forest managers and EPA regula- that is at risk, the tool points us to specific to us is that we had a highly functional, cross- tors in the study region are already using the areas to collect more soil information and disciplinary interaction that enabled us all tool to plan and conduct mitigation measures water chemistry.” to build a useful tool, and now managers are for acidified watersheds and streams. Bill using it throughout the southeastern national Jackson notes that sulfur deposition has actu- Jackson is an air resource management spe- forests to evaluate their management options, ally dropped rapidly in the eastern United cialist for the Southern Region (Region 8) of and make further policy decisions,” Hessburg States over the past several years. He says reg- the National Forest System, which includes says. “It’s science that’s having an impact.” ulations put in place by the Clean Air Act have the southern Appalachian Mountains. Jackson helped immensely. “We want to account for says, not only does the tool help him identify those improvements,” he says. “I updated the areas that may be at risk, it helps him estimate “Look deep into nature, and model with recent sulfur deposition estimates the risk caused by certain management events, then you will understand and supply them to the model. I like that about like tree harvesting. “If we harvest trees in this tool—that we can update or modify all of everything better.” high-risk areas, what will that do?” Jackson the essential inputs.” —Albert Einstein

FOR FURTHER READING McDonnell, T.; Cosby, B.; Sullivan, T.; Povak, N.A.; Hessburg, P.F.; Reynolds, K.M. Reynolds, K.M.; Hessburg, P.F.; Sullivan, McNulty, S.; Cohen. E. 2010. Comparison (et al.). 2013. Machine learning and hurdle T.J. (et al.). 2012. Spatial decision sup- among model estimates of critical loads of models for improving regional predictions for assessing impacts of atmospheric acidic deposition using different sources of stream water acid neutralizing capacity. sulfur deposition on aquatic ecosystems and scales of input data. Environmental Water Resources Research. 49: 3531–3546. in the Southern Appalachian Region. Pollution. 158: 2934–2939. http://www. http://www.treesearch.fs.fed.us/pubs/48461 Proceedings of the 45th Hawaiian inter- treesearch.fs.fed.us/pubs/36088. national conference on system sciences. Povak, N.A.; Hessburg, P.F.; McDonnell, T.C. Maui, Hawaii. Institute of Electrical and McDonnell, T.C.; Cosby, B.J.; Sullivan, (et al.). 2014. Machine learning and linear Electronic Engineers. T.J. 2012. Regionalization of soil base regression models to predict catchment- cation weathering for evaluating stream level base cation weathering rates across water acidification in the Appalachian the southern Appalachian Mountain Mountains, USA. Environmental Pollution. region, USA. Water Resources Research. 162: 338–344. 50: 2798–2814. http://www.treesearch. fs.fed.us/pubs/47559.

WRITER’S PROFILE Natasha Vizcarra is a science writer based in Boulder, Colorado. She can be reached at www.natashavizcarra.com.

5 PRSRT STD US POSTAGE PAID PORTLAND OR FINDINGS PERMIT N0 G-40 U.S. Department of Agriculture Pacific Northwest Research Station 1220 SW Third Avenue P.O. Box 3890 Portland, OR 97208-3890 Official Business Penalty for Private Use, $300

scientist profiles NICHOLAS POVAK is a PAUL HESSBURG is a KEITH REYNOLDS is a research ecologist with the research ecologist with the research forester with the Pacific Northwest Research Pacific Northwest Research Pacific Northwest Research Station. His research focuses Station. His research Station. His research focus- on developing predictive focuses on the landscape es on providing decision modeling techniques to iden- and disturbance ecology support for environmental tify key drivers of ecological of historical, current, and analysis and planning. He processes and to make predictions across large future western forests; resilience mechanisms is currently developing applications using the landscapes. Povak received his Ph.D. in forest of large landscapes; decision support for envi- Ecosystem Management Decision Support resources from the University of . ronmental analysis and planning; and research System for a wide array of problem areas. and development to support landscape restora- Reynolds received his Ph.D. in plant pathology Povak can be reached at: tion. Hessburg received his Ph.D. in botany and from North Carolina State University. USDA Forest Service plant pathology from . Reynolds can be reached at: Pacific Wildland Fire Sciences Laboratory Hessburg can be reached at: 400 N 34th Street, Suite 201 USDA Forest Service , WA 98103 USDA Forest Service Pacific Northwest Research Station Pacific Northwest Research Station Forestry Sciences Laboratory Phone: (608) 347-7629 Forestry Sciences Laboratory 3200 SW Jefferson Way E-mail: [email protected] 1133 N Western Avenue Corvallis, OR 97331 Wenatchee, WA 98801 Phone: (541) 750-7434 Phone: (509) 664-1722 E-mail: [email protected] COLLABORATORS E-mail: [email protected] Todd C. McDonnell and Timothy J. Sullivan, E&S Environmental Chemistry Inc., Corvallis, OR R. Brion Salter, USDA Forest Service, Pacific Northwest Research Station, Wenatchee, WA Bernard J. Cosby, Department of Environmental Sciences, University of Virginia, Charlottesville, VA

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