NMR Profiling of North Macedonian and Bulgarian Honeys for Detection
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Structure of an Acidic Polysaccharide Elaborated by Acetobacter Sp
Agric. Biol. Chem., 50 (5), 1271 ~1278, 1986 1271 Structure of an Acidic Polysaccharide Elaborated by Acetobacter sp. NBI 10051" Kenji Tayama, Hiroyuki Minakami, Seiichi Fujiyama, Hiroshi Masai and Akira Misaki* NakanoBiochemical Research Institute, NakanoVinegar Co., Ltd., Handa, Aichi 475, Japan * Faculty of Science of Living, Osaka City University, Sugimoto-cho, Sumiyoshi, Osaka 558, Japan Received November 19, 1985 An extracellular acidic polysaccharide elaborated by Acetobacter sp. NBI1005 was composed of D-glucose, D-galactose, D-mannose, and D-glucuronic acid (approximate molar ratio, 6 : 2 : 1 : 1). Methylation and fragmentation analysis by partial acid hydrolysis indicated that the polysaccharide has a branched structure containing a backbone chain of /?-(l ->4)-linked D-glucose residues, two out of every four glucose residues being substituted at the 0-3 positions to form two kinds of branches, one consisting of D-mannose and D-glucuronic acid residues and the other of (l ->6)-linked D-galactose and D-glucose residues. Some microorganisms belonging to Ace- cosyl-(l ->4)-D-glucuronosyl-(l ->2)-D-man- tobacter species have been knownto produce nose.9) This paper reports the structural fea- extracellular polysaccharides, such as cellu- ture of polysaccharide AM-1, as revealed by lose,1* dextran,2) levan,3) and an acidic poly- methylation, fragmentation analysis, and en- saccharide,4* and also soluble, /?-(l-»2)- zymatic degradation. branched, £-(1 ^4)-D-glucan5) and )8-(l -»2)- D-glucan.6) In the course of study on acetic MATERIALS AND METHODS acid bacteria (genera Acetobacter and Glu- conobacter) having a high productivity of Materials. Polysaccharide AM-1of Acetobacter sp. -
Download Author Version (PDF)
Environmental Science: Nano CdS Nanoparticles in Soil Induce Metabolic Reprogramming in Broad Bean (Vicia faba L.) Roots and Leaves Journal: Environmental Science: Nano Manuscript ID EN-ART-08-2019-000933.R1 Article Type: Paper Page 1 of 36 Environmental Science: Nano 1 2 3 4 The rapid development of nanotechnology has raised concern regarding the 5 6 7 environmental toxicity of nanoparticles (NPs). However, little is known about the 8 9 molecular mechanisms underlying NP toxicity in plants. Understanding toxic 10 11 12 mechanisms in organisms at molecular level, especially in crop plants, is important for 13 14 their sustainable use and development. In this study, although none of the phenotypic 15 16 17 parameters of broad bean plants (photosynthetic pigments contents, biomass, and lipid 18 19 20 peroxidation) were overtly impacted in response to CdS-NPs in soil during 28 d of 21 22 exposure, metabolomics revealed marked and statistically significant alterations in the 23 24 25 metabolite profiles of plant roots and leaves. The reprogramming of antioxidant 26 27 metabolite production presumably reflected the molecular defense response of the 28 29 30 plants to CdS-NPs stress. The sensitive responses of flavone, putrescine and 31 32 33 noradrenaline in the leaves suggests the use of these compounds in legumes as 34 35 biomarkers of oxidative stress induced by the presence of CdS-NPs in soil. 36 37 38 Metabolomics might thus be a suitable approach for the early detection of soil 39 40 contamination by Cd. In the plants, the reprogramming of carbon and nitrogen 41 42 43 metabolism (including sugars, organic acids, amino acids, and N-containing 44 45 46 compounds) alleviated the toxicity of CdS-NPs, which may have been caused by free 47 48 Cd2+ ions or perhaps by a particle-specific response. -
Electronic Supplementary Information
Electronic Supplementary Material (ESI) for Chemical Science. This journal is © The Royal Society of Chemistry 2019 Electronic Supplementary Information Poly(ionic liquid)s as a Distinct Receptor Material to Create Highly- Integrated Sensing Platform for Efficiently Identifying a Myriad of Saccharides Wanlin Zhang, Yao Li, Yun Liang, Ning Gao, Chengcheng Liu, Shiqiang Wang, Xianpeng Yin, and Guangtao Li* *Corresponding authors: Guangtao Li ([email protected]) S1 Contents 1. Experimental Section (Page S4-S6) Materials and Characterization (Page S4) Experimental Details (Page S4-S6) 2. Figures and Tables (Page S7-S40) Fig. S1 SEM image of silica colloidal crystal spheres and PIL inverse opal spheres. (Page S7) Fig. S2 Adsorption isotherm of PIL inverse opal. (Page S7) Fig. S3 Dynamic mechanical analysis and thermal gravimetric analysis of PIL materials. (Page S7) Fig. S4 Chemical structures of 23 saccharides. (Page S8) Fig. S5 The counteranion exchange of PIL photonic spheres from Br- to DCA. (Page S9) Fig. S6 Reflection and emission spectra of spheres for saccharides. (Page S9) Table S1 The jack-knifed classification on single-sphere array for 23 saccharides. (Page S10) Fig. S7 Lower detection concentration at 10 mM of the single-sphere array. (Page S11) Fig. S8 Lower detection concentration at 1 mM of the single-sphere array. (Page S12) Fig. S9 PIL sphere exhibiting great pH robustness within the biological pH range. (Page S12) Fig. S10 Exploring the tolerance of PIL spheres to different conditions. (Page S13) Fig. S11 Exploring the reusability of PIL spheres. (Page S14) Fig. S12 Responses of spheres to sugar alcohols. (Page S15) Fig. -
Sugars and Plant Innate Immunity
Journal of Experimental Botany Advance Access published May 2, 2012 Journal of Experimental Botany, Page 1 of 10 doi:10.1093/jxb/ers129 REVIEW PAPER Sugars and plant innate immunity Mohammad Reza Bolouri Moghaddam and Wim Van den Ende* KU Leuven, Laboratory of Molecular Plant Biology, Kasteelpark Arenberg 31, B-3001 Leuven, Belgium * To whom correspondence should be addressed. E-mail: [email protected] Received 27 January 2012; Revised 25 March 2012; Accepted 30 March 2012 Abstract Sugars are involved in many metabolic and signalling pathways in plants. Sugar signals may also contribute to Downloaded from immune responses against pathogens and probably function as priming molecules leading to pathogen-associated molecular patterns (PAMP)-triggered immunity and effector-triggered immunity in plants. These putative roles also depend greatly on coordinated relationships with hormones and the light status in an intricate network. Although evidence in favour of sugar-mediated plant immunity is accumulating, more in-depth fundamental research is required to unravel the sugar signalling pathways involved. This might pave the way for the use of biodegradable http://jxb.oxfordjournals.org/ sugar-(like) compounds to counteract plant diseases as cheaper and safer alternatives for toxic agrochemicals. Key words: immunity, pathogen, priming, signal, sugar. Introduction by guest on March 24, 2016 Sugars such as glucose, fructose, and sucrose are recognized Chisholm et al., 2006). Sugars are well known to activate as signalling molecules in plants (Rolland et al., 2006; various pattern recognition genes (Herbers et al., 1996a,b; Bolouri-Moghaddam et al., 2010), in addition to their Johnson and Ryan, 1990). -
Improving the Utilization of Isomaltose and Panose by Lager Yeast Saccharomyces Pastorianus
fermentation Article Improving the Utilization of Isomaltose and Panose by Lager Yeast Saccharomyces pastorianus Javier Porcayo Loza 1,2,† , Anna Chailyan 3, Jochen Forster 3 , Michael Katz 3, Uffe Hasbro Mortensen 2,* and Rosa Garcia Sanchez 3,* 1 Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, 2800 Kongens Lyngby, Denmark; [email protected] 2 Department of Bioengineering, Technical University of Denmark, 2800 Kongens Lyngby, Denmark 3 Carlsberg A/S, Carlsberg Research Laboratory, 1799 Copenhagen V, Denmark; [email protected] (A.C.); [email protected] (J.F.); [email protected] (M.K.) * Correspondence: [email protected] (U.H.M.); [email protected] (R.G.S.) † Current address: Graphenea S.A., 20009 San Sebastian, Spain. Abstract: Approximately 25% of all carbohydrates in industrial worts are poorly, if at all, fermented by brewing yeast. This includes dextrins, β-glucans, arabinose, xylose, disaccharides such as isomaltose, nigerose, kojibiose, and trisaccharides such as panose and isopanose. As the efficient utilization of carbohydrates during the wort’s fermentation impacts the alcohol yield and the organoleptic traits of the product, developing brewing strains with enhanced abilities to ferment subsets of these sugars is highly desirable. In this study, we developed Saccharomyces pastorianus laboratory yeast strains with a superior capacity to grow on isomaltose and panose. First, we designed a plasmid toolbox for Citation: Porcayo Loza, J.; Chailyan, the stable integration of genes into lager strains. Next, we used the toolbox to elevate the levels of A.; Forster, J.; Katz, M.; Mortensen, the α-glucoside transporter Agt1 and the major isomaltase Ima1. -
Sweetness and Sensory Properties of Commercial and Novel Oligosaccharides Of
1 Sweetness and sensory properties of commercial and novel oligosaccharides of 2 prebiotic potential 3 4 Laura Ruiz-Aceitunoa, Oswaldo Hernandez-Hernandeza, Sofia Kolidab, F. Javier 5 Morenoa,* and Lisa Methvenc 6 7 a Institute of Food Science Research, CIAL (CSIC-UAM), Nicolás Cabrera 9, 28049 8 Madrid (Spain) 9 b OptiBiotix Health plc, Innovation Centre, Innovation Way, Heslington, York YO10 10 5DG (UK) 11 c Sensory Science Centre, Department of Food and Nutritional Sciences, The University 12 of Reading, PO Box 226, Whiteknights, Reading RG6 6AP (UK) 13 14 *Corresponding author: [email protected] Tel (+34) 91 0017948 1 15 Abstract 16 This study investigates the sweetness properties and other sensory attributes of ten 17 commercial and four novel prebiotics (4-galactosyl-kojibiose, lactulosucrose, lactosyl- 18 oligofructosides and raffinosyl-oligofructosides) of high degree of purity and assesses the 19 influence of their chemical structure features on sweetness. The impact of the type of 20 glycosidic linkage by testing four sucrose isomers, as well as the monomer composition 21 and degree of polymerization on sweetness properties were determined. Data from the 22 sensory panel combined with principal component analysis (PCA) concludes that chain 23 length was the most relevant factor in determining the sweetness potential of a 24 carbohydrate. Thus, disaccharides had higher sweetness values than trisaccharides which, 25 in turn, exhibited superior sweetness than mixtures of oligosaccharides having DP above 26 3. Furthermore, a weak non-significant trend indicated that the presence of a ketose sugar 27 moiety led to higher sweetness. The novel prebiotics tested in this study had between 18 28 and 25% of relative sweetness, in line with other commercial prebiotics, and samples 29 varied in their extent of off flavour. -
Enzymatic Synthesis of Α-Glucosides Using Various Enzymes
Chapter 1 Reviews: Enzymatic Synthesis of α-Glucosides Using Various Enzymes 1.1 Introduction In recent years, transglycosylation or reverse hydrolysis reactions catalyzed by glycosidases have been applied to in vitro synthesis of oligosaccharides1-8) and alkylglycosides7-14). Glucosylation is considered to be one of the important methods for the structural modification of compounds having -OH groups with useful biological activities since it increases water solubility and improves pharmacological properties of the original compounds. Enzymatic synthesis is superior to the chemical synthesis methods in such cases that the enzymatic reactions proceed regioselectively and stereoselectively without protection and deprotection processes. In addition, the enzymatic reactions occur usually under mild conditions: at ordinary temperature and pressure, and a pH value around neutrality. Various compounds, such as drugs13, 17), vitamins and their analogues15, 16), and phenolic compounds17), have been anomer-selectively glucosylated by microbial glycosidases. In this chapter, the methods for enzymatic synthesis of several glucosides and mechanism of xanthan gum synthesis by Xanthomonas campestris are reviewed in details. 1 1.2 Enzymatic synthesis of glucosides 1.2.1 Neohesperidin α-glucoside synthesis using cyclodextrin glucanotransferase of Bacillus sp. A2-5a18) Citrus fruits contain two groups of flavonoid glycosides that have either rutinose (L-rhaminopyranosyl-α-1, 6-glucopyranoside) or neohesperidose (L- rhaminopyranosyl-α-1, 2-glucopyranoside) as their saccharide components. Hesperidin from mandarin oranges is tasteless. Neohesperidin from grapefruits is intensely bitter and important in citrus juices since it is converted into sweet dihydrochalcone derivatives by hydrogenation. However, since their solubilities in water are very low, enzymatic modification of neohesperidin was expected for applications in the food industry. -
Author Correction: the Planctomycete Stieleria Maiorica Mal15t Employs Stieleriacines to Alter the Species Composition in Marine Biofilms
https://doi.org/10.1038/s42003-020-01271-y OPEN Author Correction: The planctomycete Stieleria maiorica Mal15T employs stieleriacines to alter the species composition in marine biofilms Nicolai Kallscheuer , Olga Jeske, Birthe Sandargo, Christian Boedeker, Sandra Wiegand , Pascal Bartling, 1234567890():,; Mareike Jogler, Manfred Rohde, Jörn Petersen, Marnix H. Medema , Frank Surup & Christian Jogler Correction to: Communications Biology https://doi.org/10.1038/s42003-020-0993-2, published online 12 June 2020. In the original version of the Article “The planctomycete Stieleria maiorica Mal15T employs stieleriacines to alter the species composition in marine biofilms”, the authors described the new genus Stieleria and its type species Stieleria maiorica. However, the descriptions were not presented in the paper in the format required by Rule 27 and Rule 30 of the International Code of Nomenclature of Prokaryotes. Therefore, we here present the descriptions in the correct format. Description of Stieleria gen. nov. Stieleria (Stie.le’ri.a. N.L. fem. n. Stieleria named in honor of Anja Heuer, née Stieler, an extraordinary skilled German technician at the Leibniz Institute DSMZ, who played a key role in the cultivation of literally hundreds of novel planctomycetal strains). The round-to- pear-shaped cells with a smooth cell surface form rosettes or short chains. Cells reproduce by polar budding. In liquid culture, they produce an extracellular matrix that interconnects cells in aggregates. Daughter cells are motile, while mother cells are non-motile. The lifestyle is heterotrophic, obligatory aerobic, and mesophilic. The genus belongs to the phylum Planctomycetes, class Planctomycetia, order Pirellulales, and family Pirellulaceae. The type species is Stieleria maiorica. -
Rational Design of an Improved Transglucosylase for Production of the Rare Sugar Nigerose† Cite This: Chem
ChemComm COMMUNICATION Rational design of an improved transglucosylase for production of the rare sugar nigerose† Cite this: Chem. Commun., 2019, 55,4531 Jorick Franceus,a Shari Dhaene,a Hannes Decadt,a Judith Vandepitte,a Received 25th February 2019, Jurgen Caroen,b Johan Van der Eycken,b Koen Beerensa and Tom Desmet *a Accepted 26th March 2019 DOI: 10.1039/c9cc01587f rsc.li/chemcomm The sucrose phosphorylase from Bifidobacterium adolescentis (BaSP) can be used as a transglucosylase for the production of rare sugars. We designed variants of BaSP for the efficient synthesis of nigerose from sucrose and glucose, thereby adding to the inventory of rare sugars that can conveniently be produced from bulk sugars. Rare sugars hold tremendous potential for practical applications in various industries.1 Regardless, few of them have been exploited Fig. 1 Transglucosylation of glucose by mutant Q345F of the B. adoles- centis sucrose phosphorylase, resulting in the synthesis of maltose and commercially due to their scarcity in nature which prevents nigerose. them from being isolated in large quantities. These compounds have consequently become attractive targets for biocatalytic production processes starting from affordable and widely avail- kojibiose, but instead produces an equimolar mixture of maltose able carbohydrates.2 and nigerose (Fig. 1).9–12 The sucrose phosphorylase from Bifidobacterium adolescentis Nigerose is the rare a-(1,3)-bonded disaccharide of glucose that (BaSP; carbohydrate-active enzyme database family GH13) is a occurs in nature as a constituent of polysaccharides such as nigeran. particularly interesting candidate enzyme for the production of It is also found in Japanese rice wine or sake, hence its alternative such rare sugars. -
Characterization of EPS-Producing Brewery-Associated Lactobacilli
TECHNISCHE UNIVERSITÄT MÜNCHEN Wissenschaftszentrum Weihenstephan für Ernährung, Landnutzung und Umwelt Lehrstuhl für Technische Mikrobiologie Characterization of EPS-producing brewery-associated lactobacilli Marion Elisabeth Fraunhofer Vollständiger Abdruck der von der Fakultät Wissenschaftszentrum Weihenstephan für Ernährung, Landnutzung und Umwelt der Technischen Universität München zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften genehmigten Dissertation. Vorsitzender: Prof. Dr. Horst-Christian Langowski Prüfer der Dissertation: 1. Prof. Dr. Rudi F. Vogel 2. Hon.-Prof. Dr.-Ing. Friedrich Jacob Die Dissertation wurde am 13.12.2017 bei der Technischen Universität München eingereicht und durch die Fakultät Wissenschaftszentrum Weihenstephan für Ernährung, Landnutzung und Umwelt am 06.03.2018 angenommen. Vorwort Vorwort Die vorliegende Arbeit entstand im Rahmen eines durch Haushaltsmittel des BMWi über die AiF-Forschungsvereiningung Wissenschaftsförderung der Deutschen Brauwirtschaft e.V. geförderten Projekts (AiF18194 N). Mein besonderer Dank gilt meinem Doktorvater Herrn Prof. Dr. rer. nat. Rudi F. Vogel für das Vertrauen, die Unterstützung und die Loyalität auf die ich mich in den letzten Jahren stets verlassen konnte. Danke Rudi, dass ich meine Promotion an deinem Lehrstuhl durchführen durfte. Desweitern bedanke ich mich bei Dr. rer. nat. Frank Jakob, der mich durch seine umfassende Betreuung sicher durch meine Dissertation begleitet hat. Apl. Prof. Dr. Matthias Ehrmann und apl. Prof. Dr. Ludwig Niessen -
Structural Features
1 Structural features As defined by the International Union of Pure and Applied Chemistry gly- cans are structures of multiple monosaccharides linked through glycosidic bonds. The terms sugar and saccharide are synonyms, depending on your preference for Arabic (“sukkar”) or Greek (“sakkēaron”). Saccharide is the root for monosaccha- rides (a single carbohydrate unit), oligosaccharides (3 to 20 units) and polysac- charides (large polymers of more than 20 units). Carbohydrates follow the basic formula (CH2O)N>2. Glycolaldehyde (CH2O)2 would be the simplest member of the family if molecules of two C-atoms were not excluded from the biochemical repertoire. Glycolaldehyde has been found in space in cosmic dust surrounding star-forming regions of the Milky Way galaxy. Glycolaldehyde is a precursor of several organic molecules. For example, reaction of glycolaldehyde with propenal, another interstellar molecule, yields ribose, a carbohydrate that is also the backbone of nucleic acids. Figure 1 – The Rho Ophiuchi star-forming region is shown in infrared light as captured by NASA’s Wide-field Infrared Explorer. Glycolaldehyde was identified in the gas surrounding the star-forming region IRAS 16293-2422, which is is the red object in the centre of the marked square. This star-forming region is 26’000 light-years away from Earth. Glycolaldehyde can react with propenal to form ribose. Image source: www.eso.org/public/images/eso1234a/ Beginning the count at three carbon atoms, glyceraldehyde and dihydroxy- acetone share the common chemical formula (CH2O)3 and represent the smallest carbohydrates. As their names imply, glyceraldehyde has an aldehyde group (at C1) and dihydoxyacetone a carbonyl group (at C2). -
Kalinka Christopher Thesis.Pdf (3.535Mb)
UNIVERSITY OF WISCONSIN-LA CROSSE Graduate Studies DOES THE YICJI OPERON CONTRIBUTE TO UROPATHOGENIC ESCHERICHIA COLI FITNESS WHEN CULTURED IN HUMAN URINE A Manuscript Style Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science in Microbiology Christopher Kalinka College of Science and Health Microbiology May, 2020 ABSTRACT Kalinka, C.P. Does the yicJI operon contribute to uropathogenic Escherichia coli fitness when cultured in human urine. MS in Microbiology, May 2020, 81pp. (W.Schwan). Escherichia coli is a common bacterium found in the intestinal tracts of many mammals. A medically relevant type of E. coli is known as uropathogenic E. coli (UPEC). One of the most critical research areas involves genes that are responsible for bacterial fitness, like the yicJ gene, which encodes the sodium:galactoside symporter; yicI, which encodes the α-glycosidase YicI; and frzR, which encodes FrzR that is the activator of the frz operon and a putative activator of the yicJI operon. To examine what impacts yicJ, yicI, the yicJI operon, and frzR had on fitness, each gene was cloned into the pMMB91 plasmid and growth curves in urine and buffered Luria broth were done for each recombinant strain in 96-well plates from 0 h-72 h. The growth curve studies demonstrated that overexpression of yicJI and frzR significantly enhanced growth in shaken human urine, whereas overexpression of yicJI attenuated growth in Luria-Bertani broth. Additionally, a portion of the promoter region of frzR was also cloned into the pCRISPathBrick plasmid to act as a gRNA scaffold for dCas9 to knock down the gene expression of the frzR gene.