Species Identification Guide New York Harbor Estuary Species Identification Guide
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Blenniiformes, Tripterygiidae) from Taiwan
A peer-reviewed open-access journal ZooKeys 216: 57–72 (2012) A new species of the genus Helcogramma from Taiwan 57 doi: 10.3897/zookeys.216.3407 RESEARCH articLE www.zookeys.org Launched to accelerate biodiversity research A new species of the genus Helcogramma (Blenniiformes, Tripterygiidae) from Taiwan Min-Chia Chiang1,†, I-Shiung Chen1,2,‡ 1 Institute of Marine Biology, National Taiwan Ocean University, Keelung 202, Taiwan, ROC 2 Center for Mari- ne Bioenvironment and Biotechnology (CMBB), National Taiwan Ocean University, Keelung 202, Taiwan, ROC † urn:lsid:zoobank.org:author:D82C98B9-D9AA-46E1-83F7-D8BB74776122 ‡ urn:lsid:zoobank.org:author:6094BBA6-5EE6-420F-BAA5-F52D44F11F14 Corresponding author: I-Shiung Chen ([email protected]) Academic editor: Carole Baldwin | Received 19 May 2012 | Accepted 13 August 2012 | Published 21 August 2012 urn:lsid:zoobank.org:pub:2D3E6BCC-171E-4702-B759-E7D7FCEA88DB Citation: Chiang M-C, Chen I-S (2012) A new species of the genus Helcogramma (Blenniiformes, Tripterygiidae) from Taiwan. ZooKeys 216: 57–72. doi: 10.3897/zookeys.216.3407 Abstract A new species of triplefin fish (Blenniiformes: Tripterygiidae), Helcogramma williamsi, is described from six specimens collected from southern Taiwan. This species is well distinguished from its congeners by possess- ing 13 second dorsal-fin spines; third dorsal-fin rays modally 11; anal-fin rays modally 19; pored scales in lateral line 22-24; dentary pore pattern modally 5+1+5; lobate supraorbital cirrus; broad, serrated or pal- mate nasal cirrus; first dorsal fin lower in height than second; males with yellow mark extending from ante- rior tip of upper lip to anterior margin of eye and a whitish blue line extending from corner of mouth onto preopercle. -
Phlebobranchia of CTAW
PHLEBOBRANCHIA PHLEBOBRANCHIA The suborder Phlebobranchia (order Enterogona) is characterised by having unpaired gonads present only on the same side of the body as the gut. As in Stolidobranchia, the body is not divided into different sections (such as thorax, abdomen and posterior abdomen) as the gut is folded up in the parietal body wall outside the pharynx and the large branchial sac occupies the whole length of the body. Usually the branchial sac (which is flat, without folds) has internal longitudinal vessels (although only vestiges remain in Agneziidae). Epicardial sacs do not persist in adults as they do in Aplousobranchia, although excretory vesicles (nephrocytes) embedded in the body wall over the gut are known to originate from the embryonic epicardium in Ascidiidae and Corellidae. Most phlebobranchs are solitary. However, Plurellidae Kott, 1973 includes both solitary and colonial forms, and Perophoridae Giard, 1872 are all colonial. Replication in Perophoridae is from ectodermal epithelium (rather than endodermal or mesodermal tissue the mesodermal tissue of the vascular stolon (rather than the endodermal tissue as in most as in Aplousobranchia). The process of replication has not been investigated in Plurellidae. Phlebobranch taxa occurring in Australia are documented in Kott (1985). Family level taxa are characterised principally by the size and form of the branchial sac including the number of branchial vessels and form of the stigmata; the form, size and position of the gonads; and the habit (colonial or solitary) of the taxon. Berrill (1950) has discussed problems in assessing the phylogeny of Perophoridae. References Berrill, N.J. (1950). The Tunicata. Ray Soc. Publs 133: 1–354 Giard, A.M. -
A Thesis Entitled Molecular, Morphological, and Biogeographic Resolution of Cryptic Taxa in the Greenside Darter Etheostoma Blen
A Thesis Entitled Molecular, morphological, and biogeographic resolution of cryptic taxa in the Greenside Darter Etheostoma blennioides complex By Amanda E. Haponski Submitted as partial fulfillment of the requirements for The Master of Science Degree in Biology (Ecology-track) ____________________________ Advisor: Dr. Carol A. Stepien ____________________________ Committee Member: Dr. Timothy G. Fisher ____________________________ Committee Member: Dr. Johan F. Gottgens ____________________________ College of Graduate Studies The University of Toledo December 2007 Copyright © 2007 This document is copyrighted material. Under copyright law, no parts of this document may be reproduced without the expressed permission of the author. An Abstract of Molecular, morphological, and biogeographic resolution of cryptic taxa in the Greenside Darter Etheostoma blennioides complex Amanda E. Haponski Submitted as partial fulfillment of the requirements for The Master of Science Degree in Biology (Ecology-track) The University of Toledo December 2007 DNA sequencing has led to the resolution of many cryptic taxa, which are especially prevalent in the North American darter fishes (Family Percidae). The Greenside Darter Etheostoma blennioides commonly occurs in the lower Great Lakes region, where two putative subspecies, the eastern “Allegheny” type E. b. blennioides and the western “Prairie” type E. b. pholidotum , overlap. The objective of this study was to test the systematic identity and genetic divergence distinguishing the two subspecies in areas of sympatry and allopatry in comparison to other subspecies and close relatives. DNA sequences from the mtDNA cytochrome b gene and control region and the nuclear S7 intron 1 comprising a total of 1,497 bp were compared from 294 individuals across 18 locations, including the Lake Erie basin and the Allegheny, Meramec, Obey, Ohio, Rockcastle, Susquehanna, and Wabash River systems. -
Table S1.Xlsx
Bone type Bone type Taxonomy Order/series Family Valid binomial Outdated binomial Notes Reference(s) (skeletal bone) (scales) Actinopterygii Incertae sedis Incertae sedis Incertae sedis †Birgeria stensioei cellular this study †Birgeria groenlandica cellular Ørvig, 1978 †Eurynotus crenatus cellular Goodrich, 1907; Schultze, 2016 †Mimipiscis toombsi †Mimia toombsi cellular Richter & Smith, 1995 †Moythomasia sp. cellular cellular Sire et al., 2009; Schultze, 2016 †Cheirolepidiformes †Cheirolepididae †Cheirolepis canadensis cellular cellular Goodrich, 1907; Sire et al., 2009; Zylberberg et al., 2016; Meunier et al. 2018a; this study Cladistia Polypteriformes Polypteridae †Bawitius sp. cellular Meunier et al., 2016 †Dajetella sudamericana cellular cellular Gayet & Meunier, 1992 Erpetoichthys calabaricus Calamoichthys sp. cellular Moss, 1961a; this study †Pollia suarezi cellular cellular Meunier & Gayet, 1996 Polypterus bichir cellular cellular Kölliker, 1859; Stéphan, 1900; Goodrich, 1907; Ørvig, 1978 Polypterus delhezi cellular this study Polypterus ornatipinnis cellular Totland et al., 2011 Polypterus senegalus cellular Sire et al., 2009 Polypterus sp. cellular Moss, 1961a †Scanilepis sp. cellular Sire et al., 2009 †Scanilepis dubia cellular cellular Ørvig, 1978 †Saurichthyiformes †Saurichthyidae †Saurichthys sp. cellular Scheyer et al., 2014 Chondrostei †Chondrosteiformes †Chondrosteidae †Chondrosteus acipenseroides cellular this study Acipenseriformes Acipenseridae Acipenser baerii cellular Leprévost et al., 2017 Acipenser gueldenstaedtii -
Attachment Properties of Blue Mussel (Mytilus Edulis L.) Byssus Threads on Culture-Based Artificial Collector Substrates
Aquacultural Engineering 42 (2010) 128–139 View metadata, citation and similar papers at core.ac.uk brought to you by CORE Contents lists available at ScienceDirect provided by Electronic Publication Information Center Aquacultural Engineering journal homepage: www.elsevier.com/locate/aqua-online Attachment properties of blue mussel (Mytilus edulis L.) byssus threads on culture-based artificial collector substrates M. Brenner a,b,c,∗, B.H. Buck a,c,d a Alfred Wegener Institute for Polar and Marine Research (AWI), Am Handelshafen 12, 27570 Bremerhaven, Germany b Jacobs University Bremen, Campus Ring 1, 28759 Bremen, Germany c Institute for Marine Resourses (IMARE), Klußmannstraße 1, 27570 Bremerhaven, Germany d University of Applied Sciences Bremerhaven, An der Karlstadt 8, 27568 Bremerhaven, Germany article info abstract Article history: The attachment strength of blue mussels (Mytilus edulis) growing under exposed conditions on 10 differ- Received 25 May 2009 ent artificial substrates was measured while assessing microstructure of the applied substrate materials. Accepted 9 February 2010 Fleece-like microstructure attracted especially mussel larvae, however, most settled individuals lost attachment on this type of microstructure with increasing size during the time of experiment. Sub- Keywords: strates with thick filaments and long and fixed appendices were less attractive to larvae but provided a Spat collectors better foothold for juvenile mussels as shown by the results of the dislodgement trials. In addition these Offshore aquaculture appendices of substrates could interweave with the mussels, building up a resistant mussel/substrate con- Offshore wind farms Mytilus edulis glomerate. Our results show that a mussel byssus apparatus can withstand harsh conditions, if suitable Dislodgement substrates are deployed. -
Biogeographical Homogeneity in the Eastern Mediterranean Sea. II
Vol. 19: 75–84, 2013 AQUATIC BIOLOGY Published online September 4 doi: 10.3354/ab00521 Aquat Biol Biogeographical homogeneity in the eastern Mediterranean Sea. II. Temporal variation in Lebanese bivalve biota Fabio Crocetta1,*, Ghazi Bitar2, Helmut Zibrowius3, Marco Oliverio4 1Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy 2Department of Natural Sciences, Faculty of Sciences, Lebanese University, Hadath, Lebanon 3Le Corbusier 644, 280 Boulevard Michelet, 13008 Marseille, France 4Dipartimento di Biologia e Biotecnologie ‘Charles Darwin’, University of Rome ‘La Sapienza’, Viale dell’Università 32, 00185 Roma, Italy ABSTRACT: Lebanon (eastern Mediterranean Sea) is an area of particular biogeographic signifi- cance for studying the structure of eastern Mediterranean marine biodiversity and its recent changes. Based on literature records and original samples, we review here the knowledge of the Lebanese marine bivalve biota, tracing its changes during the last 170 yr. The updated checklist of bivalves of Lebanon yielded a total of 114 species (96 native and 18 alien taxa), accounting for ca. 26.5% of the known Mediterranean Bivalvia and thus representing a particularly poor fauna. Analysis of the 21 taxa historically described on Lebanese material only yielded 2 available names. Records of 24 species are new for the Lebanese fauna, and Lioberus ligneus is also a new record for the Mediterranean Sea. Comparisons between molluscan records by past (before 1950) and modern (after 1950) authors revealed temporal variations and qualitative modifications of the Lebanese bivalve fauna, mostly affected by the introduction of Erythraean species. The rate of recording of new alien species (evaluated in decades) revealed later first local arrivals (after 1900) than those observed for other eastern Mediterranean shores, while the peak in records in conjunc- tion with our samplings (1991 to 2010) emphasizes the need for increased field work to monitor their arrival and establishment. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
TNP SOK 2011 Internet
GARDEN ROUTE NATIONAL PARK : THE TSITSIKAMMA SANP ARKS SECTION STATE OF KNOWLEDGE Contributors: N. Hanekom 1, R.M. Randall 1, D. Bower, A. Riley 2 and N. Kruger 1 1 SANParks Scientific Services, Garden Route (Rondevlei Office), PO Box 176, Sedgefield, 6573 2 Knysna National Lakes Area, P.O. Box 314, Knysna, 6570 Most recent update: 10 May 2012 Disclaimer This report has been produced by SANParks to summarise information available on a specific conservation area. Production of the report, in either hard copy or electronic format, does not signify that: the referenced information necessarily reflect the views and policies of SANParks; the referenced information is either correct or accurate; SANParks retains copies of the referenced documents; SANParks will provide second parties with copies of the referenced documents. This standpoint has the premise that (i) reproduction of copywrited material is illegal, (ii) copying of unpublished reports and data produced by an external scientist without the author’s permission is unethical, and (iii) dissemination of unreviewed data or draft documentation is potentially misleading and hence illogical. This report should be cited as: Hanekom N., Randall R.M., Bower, D., Riley, A. & Kruger, N. 2012. Garden Route National Park: The Tsitsikamma Section – State of Knowledge. South African National Parks. TABLE OF CONTENTS 1. INTRODUCTION ...............................................................................................................2 2. ACCOUNT OF AREA........................................................................................................2 -
De Novo Draft Assembly of the Botrylloides Leachii Genome
bioRxiv preprint doi: https://doi.org/10.1101/152983; this version posted June 21, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 De novo draft assembly of the Botrylloides leachii genome 2 provides further insight into tunicate evolution. 3 4 Simon Blanchoud1#, Kim Rutherford2, Lisa Zondag1, Neil Gemmell2 and Megan J Wilson1* 5 6 1 Developmental Biology and Genomics Laboratory 7 2 8 Department of Anatomy, School of Biomedical Sciences, University of Otago, P.O. Box 56, 9 Dunedin 9054, New Zealand 10 # Current address: Department of Zoology, University of Fribourg, Switzerland 11 12 * Corresponding author: 13 Email: [email protected] 14 Ph. +64 3 4704695 15 Fax: +64 479 7254 16 17 Keywords: chordate, regeneration, Botrylloides leachii, ascidian, tunicate, genome, evolution 1 bioRxiv preprint doi: https://doi.org/10.1101/152983; this version posted June 21, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 18 Abstract (250 words) 19 Tunicates are marine invertebrates that compose the closest phylogenetic group to the 20 vertebrates. This chordate subphylum contains a particularly diverse range of reproductive 21 methods, regenerative abilities and life-history strategies. Consequently, tunicates provide an 22 extraordinary perspective into the emergence and diversity of chordate traits. Currently 23 published tunicate genomes include three Phlebobranchiae, one Thaliacean, one Larvacean 24 and one Stolidobranchian. To gain further insights into the evolution of the tunicate phylum, 25 we have sequenced the genome of the colonial Stolidobranchian Botrylloides leachii. -
Early Ontogeny of Jurassic Bakevelliids and Their Bearing on Bivalve Evolution
Early ontogeny of Jurassic bakevelliids and their bearing on bivalve evolution NIKOLAUS MALCHUS Malchus, N. 2004. Early ontogeny of Jurassic bakevelliids and their bearing on bivalve evolution. Acta Palaeontologica Polonica 49 (1): 85–110. Larval and earliest postlarval shells of Jurassic Bakevelliidae are described for the first time and some complementary data are given concerning larval shells of oysters and pinnids. Two new larval shell characters, a posterodorsal outlet and shell septum are described. The outlet is homologous to the posterodorsal notch of oysters and posterodorsal ridge of arcoids. It probably reflects the presence of the soft anatomical character post−anal tuft, which, among Pteriomorphia, was only known from oysters. A shell septum was so far only known from Cassianellidae, Lithiotidae, and the bakevelliid Kobayashites. A review of early ontogenetic shell characters strongly suggests a basal dichotomy within the Pterio− morphia separating taxa with opisthogyrate larval shells, such as most (or all?) Praecardioida, Pinnoida, Pterioida (Bakevelliidae, Cassianellidae, all living Pterioidea), and Ostreoida from all other groups. The Pinnidae appear to be closely related to the Pterioida, and the Bakevelliidae belong to the stem line of the Cassianellidae, Lithiotidae, Pterioidea, and Ostreoidea. The latter two superfamilies comprise a well constrained clade. These interpretations are con− sistent with recent phylogenetic hypotheses based on palaeontological and genetic (18S and 28S mtDNA) data. A more detailed phylogeny is hampered by the fact that many larval shell characters are rather ancient plesiomorphies. Key words: Bivalvia, Pteriomorphia, Bakevelliidae, larval shell, ontogeny, phylogeny. Nikolaus Malchus [[email protected]], Departamento de Geologia/Unitat Paleontologia, Universitat Autòno− ma Barcelona, 08193 Bellaterra (Cerdanyola del Vallès), Spain. -
Bering Sea Marine Invasive Species Assessment Alaska Center for Conservation Science
Bering Sea Marine Invasive Species Assessment Alaska Center for Conservation Science Scientific Name: Botrylloides violaceus Phylum Chordata Common Name chain tunicate Class Ascidiacea Order Stolidobranchia Family Styelidae Z:\GAP\NPRB Marine Invasives\NPRB_DB\SppMaps\BOTVIO.png 80 Final Rank 56.25 Data Deficiency: 0.00 Category Scores and Data Deficiencies Total Data Deficient Category Score Possible Points Distribution and Habitat: 22 30 0 Anthropogenic Influence: 4.75 10 0 Biological Characteristics: 20.5 30 0 Impacts: 9 30 0 Figure 1. Occurrence records for non-native species, and their geographic proximity to the Bering Sea. Ecoregions are based on the classification system by Spalding et al. (2007). Totals: 56.25 100.00 0.00 Occurrence record data source(s): NEMESIS and NAS databases. General Biological Information Tolerances and Thresholds Minimum Temperature (°C) -1 Minimum Salinity (ppt) 20 Maximum Temperature (°C) 29 Maximum Salinity (ppt) 38 Minimum Reproductive Temperature (°C) 15 Minimum Reproductive Salinity (ppt) 26 Maximum Reproductive Temperature (°C) 25 Maximum Reproductive Salinity (ppt) 38 Additional Notes B. violaceus is a thinly encrusting, colonial tunicate. Colonies are uniformly colored, but can vary from purple, red, yellow, orange and brown. It species is native to the Northwest Pacific, but has been introduced on both coasts of North America, and parts of Atlantic Europe. It is a common fouling organism throughout much of its introduced range, where it often displaces and competes with other native and non-native fouling organisms, including tunicates, bryozoans, barnacles, and mussels. Reviewed by Linda Shaw, NOAA Fisheries Alaska Regional Office, Juneau AK Review Date: 8/31/2017 Report updated on Wednesday, December 06, 2017 Page 1 of 14 1. -
Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora)
Gulf of Mexico Science Volume 34 Article 4 Number 1 Number 1/2 (Combined Issue) 2018 Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Laguna Madre, Tamaulipas, Mexico: Spatial and Temporal Distribution Martha Reguero Universidad Nacional Autónoma de México Andrea Raz-Guzmán Universidad Nacional Autónoma de México DOI: 10.18785/goms.3401.04 Follow this and additional works at: https://aquila.usm.edu/goms Recommended Citation Reguero, M. and A. Raz-Guzmán. 2018. Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Laguna Madre, Tamaulipas, Mexico: Spatial and Temporal Distribution. Gulf of Mexico Science 34 (1). Retrieved from https://aquila.usm.edu/goms/vol34/iss1/4 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf of Mexico Science by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. Reguero and Raz-Guzmán: Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Lagu Gulf of Mexico Science, 2018(1), pp. 32–55 Molluscs (Mollusca: Gastropoda, Bivalvia, Polyplacophora) of Laguna Madre, Tamaulipas, Mexico: Spatial and Temporal Distribution MARTHA REGUERO AND ANDREA RAZ-GUZMA´ N Molluscs were collected in Laguna Madre from seagrass beds, macroalgae, and bare substrates with a Renfro beam net and an otter trawl. The species list includes 96 species and 48 families. Six species are dominant (Bittiolum varium, Costoanachis semiplicata, Brachidontes exustus, Crassostrea virginica, Chione cancellata, and Mulinia lateralis) and 25 are commercially important (e.g., Strombus alatus, Busycoarctum coarctatum, Triplofusus giganteus, Anadara transversa, Noetia ponderosa, Brachidontes exustus, Crassostrea virginica, Argopecten irradians, Argopecten gibbus, Chione cancellata, Mercenaria campechiensis, and Rangia flexuosa).