Triple Photochemical Domino Reaction of a Tetrafiuorostilbene Terminating in Double Fiuorine Atom Transfer
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De Novo Biosynthesis of Terminal Alkyne-Labeled Natural Products
De novo biosynthesis of terminal alkyne-labeled natural products Xuejun Zhu1,2, Joyce Liu2,3, Wenjun Zhang1,2,4* 1Department of Chemical and Biomolecular Engineering, 2Energy Biosciences Institute, 3Department of Bioengineering, University of California, Berkeley, CA 94720, USA. 4Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. *e-mail:[email protected] 1 Abstract: The terminal alkyne is a functionality widely used in organic synthesis, pharmaceutical science, material science, and bioorthogonal chemistry. This functionality is also found in acetylenic natural products, but the underlying biosynthetic pathways for its formation are not well understood. Here we report the characterization of the first carrier protein- dependent terminal alkyne biosynthetic machinery in microbes. We further demonstrate that this enzymatic machinery can be exploited for the in situ generation and incorporation of terminal alkynes into two natural product scaffolds in E. coli. These results highlight the prospect for tagging major classes of natural products, including polyketides and polyketide/non-ribosomal peptide hybrids, using biosynthetic pathway engineering. 2 Natural products are important small molecules widely used as drugs, pesticides, herbicides, and biological probes. Tagging natural products with a unique chemical handle enables the visualization, enrichment, quantification, and mode of action study of natural products through bioorthogonal chemistry1-4. One prevalent bioorthogonal reaction is -
Dehydrogenation by Heterogeneous Catalysts
Dehydrogenation by Heterogeneous Catalysts Daniel E. Resasco School of Chemical Engineering and Materials Science University of Oklahoma Encyclopedia of Catalysis January, 2000 1. INTRODUCTION Catalytic dehydrogenation of alkanes is an endothermic reaction, which occurs with an increase in the number of moles and can be represented by the expression Alkane ! Olefin + Hydrogen This reaction cannot be carried out thermally because it is highly unfavorable compared to the cracking of the hydrocarbon, since the C-C bond strength (about 246 kJ/mol) is much lower than that of the C-H bond (about 363 kJ/mol). However, in the presence of a suitable catalyst, dehydrogenation can be carried out with minimal C-C bond rupture. The strong C-H bond is a closed-shell σ orbital that can be activated by oxide or metal catalysts. Oxides can activate the C-H bond via hydrogen abstraction because they can form O-H bonds, which can have strengths comparable to that of the C- H bond. By contrast, metals cannot accomplish the hydrogen abstraction because the M- H bonds are much weaker than the C-H bond. However, the sum of the M-H and M-C bond strengths can exceed the C-H bond strength, making the process thermodynamically possible. In this case, the reaction is thought to proceed via a three centered transition state, which can be described as a metal atom inserting into the C-H bond. The C-H bond bridges across the metal atom until it breaks, followed by the formation of the corresponding M-H and M-C bonds.1 Therefore, dehydrogenation of alkanes can be carried out on oxides as well as on metal catalysts. -
Production of Pure Hydrogen by Ethanol Dehydrogenation Abstract
The Future Role of Hydrogen in Petrochemistry and Energy Supply DGMK Conference October 4-6, 2010, Berlin, Germany Production of Pure Hydrogen by Ethanol Dehydrogenation E. Santacesaria, G. Carotenuto, R. Tesser, M. Di Serio University of Naples “Federico II”, Department of Chemistry, Naples, Italy Abstract Hydrogen production from bio-ethanol is one of the most promising renewable processes to generate electricity using fuel cells. In this work, we have studied the production of pure hydrogen as by product of ethanol dehydrogenation reaction. This reaction is promoted by copper based catalysts and according to the catalyst used and the operative conditions gives place to acetaldehyde or ethyl acetate as main products. We studied in particular the performance of a commercial copper/copper chromite catalyst, supported on alumina and containing barium chromate as promoter that has given the best results. By operating at low pressure and temperature with short residence times, acetaldehyde is more selectively produced, while, by increasing the pressure (10-30 bars), the temperature (200-260°C) and the residence time (about 100 (grams hour/mol) of ethanol contact time) the selectivity is shifted to the production of ethyl acetate. However, in both cases pure hydrogen is obtained, as by product, that can easily be separated. Hydrogen obtained in this way is exempt of CO and can be directly fed to fuel cells without any inconvenience. In this work, runs performed in different operative conditions have been reported with the scope to individuate the best conditions. A carrier of H2 6% in N2 has been used. The studied catalyst has also shown a good thermal stability with respect to sintering phenomena, that generally occurs during the -1 -1 dehydrogenation on other copper catalysts. -
An Indicator of Triplet State Baird-Aromaticity
inorganics Article The Silacyclobutene Ring: An Indicator of Triplet State Baird-Aromaticity Rabia Ayub 1,2, Kjell Jorner 1,2 ID and Henrik Ottosson 1,2,* 1 Department of Chemistry—BMC, Uppsala University, Box 576, SE-751 23 Uppsala, Sweden; [email protected] (R.A.); [email protected] (K.J.) 2 Department of Chemistry-Ångström Laboratory Uppsala University, Box 523, SE-751 20 Uppsala, Sweden * Correspondence: [email protected]; Tel.: +46-18-4717476 Received: 23 October 2017; Accepted: 11 December 2017; Published: 15 December 2017 Abstract: Baird’s rule tells that the electron counts for aromaticity and antiaromaticity in the first ππ* triplet and singlet excited states (T1 and S1) are opposite to those in the ground state (S0). Our hypothesis is that a silacyclobutene (SCB) ring fused with a [4n]annulene will remain closed in the T1 state so as to retain T1 aromaticity of the annulene while it will ring-open when fused to a [4n + 2]annulene in order to alleviate T1 antiaromaticity. This feature should allow the SCB ring to function as an indicator for triplet state aromaticity. Quantum chemical calculations of energy and (anti)aromaticity changes along the reaction paths in the T1 state support our hypothesis. The SCB ring should indicate T1 aromaticity of [4n]annulenes by being photoinert except when fused to cyclobutadiene, where it ring-opens due to ring-strain relief. Keywords: Baird’s rule; computational chemistry; excited state aromaticity; Photostability 1. Introduction Baird showed in 1972 that the rules for aromaticity and antiaromaticity of annulenes are reversed in the lowest ππ* triplet state (T1) when compared to Hückel’s rule for the electronic ground state (S0)[1–3]. -
Process Technologies and Projects for Biolpg
energies Review Process Technologies and Projects for BioLPG Eric Johnson Atlantic Consulting, 8136 Gattikon, Switzerland; [email protected]; Tel.: +41-44-772-1079 Received: 8 December 2018; Accepted: 9 January 2019; Published: 15 January 2019 Abstract: Liquified petroleum gas (LPG)—currently consumed at some 300 million tonnes per year—consists of propane, butane, or a mixture of the two. Most of the world’s LPG is fossil, but recently, BioLPG has been commercialized as well. This paper reviews all possible synthesis routes to BioLPG: conventional chemical processes, biological processes, advanced chemical processes, and other. Processes are described, and projects are documented as of early 2018. The paper was compiled through an extensive literature review and a series of interviews with participants and stakeholders. Only one process is already commercial: hydrotreatment of bio-oils. Another, fermentation of sugars, has reached demonstration scale. The process with the largest potential for volume is gaseous conversion and synthesis of two feedstocks, cellulosics or organic wastes. In most cases, BioLPG is produced as a byproduct, i.e., a minor output of a multi-product process. BioLPG’s proportion of output varies according to detailed process design: for example, the advanced chemical processes can produce BioLPG at anywhere from 0–10% of output. All these processes and projects will be of interest to researchers, developers and LPG producers/marketers. Keywords: Liquified petroleum gas (LPG); BioLPG; biofuels; process technologies; alternative fuels 1. Introduction Liquified petroleum gas (LPG) is a major fuel for heating and transport, with a current global market of around 300 million tonnes per year. -
Catalytic Hydrogenation and Dehydrogenation Reactions of N-Alkyl-Bis(Carbazole)-Based Hydrogen Storage Materials
catalysts Article Catalytic Hydrogenation and Dehydrogenation Reactions of N-alkyl-bis(carbazole)-Based Hydrogen Storage Materials Joori Jung 1,2,†, Byeong Soo Shin 3,4,†, Jeong Won Kang 4,5,* and Won-Sik Han 1,* 1 Department of Chemistry, Seoul Women’s University, Seoul 01797, Korea; [email protected] 2 REYON Pharmaceutical, Co., Ltd., Anyang 01459, Korea 3 Hyundai Motor Company, Strategy & Technology Division, Ulwang 16082, Korea; [email protected] 4 Department of Chemical and Biological Engineering, Korea University, Seoul 02841, Korea 5 Graduate School of Energy and Environment, Korea University, Seoul 02841, Korea * Correspondence: [email protected] (J.W.K.); [email protected] (W.-S.H.) † These authors contributed equally. Abstract: Recently, there have been numerous efforts to develop hydrogen-rich organic materials because hydrogen energy is emerging as a renewable energy source. In this regard, we designed and prepared four new materials based on N-alkyl-bis(carbazole), 9,90-(2-methylpropane-1,3-diyl)bis(9H- carbazole) (MBC), 9,90-(2-ethylpropane-1,3-diyl)bis(9H-carbazole) (EBC), 9,90-(2-propylpropane-1,3- diyl)bis(9H-carbazole) (PBC), and 9,90-(2-butylpropane-1,3-diyl)bis(9H-carbazole) (BBC), to investi- gate their hydrogen adsorption/hydrogen desorption reactivity depending on the length of the alkyl chain. The gravimetric densities of MBC, EBC, PBC, and BBC were 5.86, 5.76, 5.49, and 5.31 H2 wt %, respectively, again depending on the alkyl chain length. All materials showed complete hydro- genation reactions under ruthenium on an alumina catalyst at 190 ◦C, and complete reverse reactions ◦ and dehydrogenation reactions were observed under palladium on an alumina catalyst at <280 C. -
Cycloalkanes, Cycloalkenes, and Cycloalkynes
CYCLOALKANES, CYCLOALKENES, AND CYCLOALKYNES any important hydrocarbons, known as cycloalkanes, contain rings of carbon atoms linked together by single bonds. The simple cycloalkanes of formula (CH,), make up a particularly important homologous series in which the chemical properties change in a much more dramatic way with increasing n than do those of the acyclic hydrocarbons CH,(CH,),,-,H. The cyclo- alkanes with small rings (n = 3-6) are of special interest in exhibiting chemical properties intermediate between those of alkanes and alkenes. In this chapter we will show how this behavior can be explained in terms of angle strain and steric hindrance, concepts that have been introduced previously and will be used with increasing frequency as we proceed further. We also discuss the conformations of cycloalkanes, especially cyclo- hexane, in detail because of their importance to the chemistry of many kinds of naturally occurring organic compounds. Some attention also will be paid to polycyclic compounds, substances with more than one ring, and to cyclo- alkenes and cycloalkynes. 12-1 NOMENCLATURE AND PHYSICAL PROPERTIES OF CYCLOALKANES The IUPAC system for naming cycloalkanes and cycloalkenes was presented in some detail in Sections 3-2 and 3-3, and you may wish to review that ma- terial before proceeding further. Additional procedures are required for naming 446 12 Cycloalkanes, Cycloalkenes, and Cycloalkynes Table 12-1 Physical Properties of Alkanes and Cycloalkanes Density, Compounds Bp, "C Mp, "C diO,g ml-' propane cyclopropane butane cyclobutane pentane cyclopentane hexane cyclohexane heptane cycloheptane octane cyclooctane nonane cyclononane "At -40". bUnder pressure. polycyclic compounds, which have rings with common carbons, and these will be discussed later in this chapter. -
Alkenes and Alkynes
02/21/2019 CHAPTER FOUR Alkenes and Alkynes H N O I Cl C O C O Cl F3C C Cl C Cl Efavirenz Haloprogin (antiviral, AIDS therapeutic) (antifungal, antiseptic) Chapter 4 Table of Content * Unsaturated Hydrocarbons * Introduction and hybridization * Alkenes and Alkynes * Benzene and Phenyl groups * Structure of Alkenes, cis‐trans Isomerism * Nomenclature of Alkenes and Alkynes * Configuration cis/trans, and cis/trans Isomerism * Configuration E/Z * Physical Properties of Hydrocarbons * Acid‐Base Reactions of Hydrocarbons * pka and Hybridizations 1 02/21/2019 Unsaturated Hydrocarbons • Unsaturated Hydrocarbon: A hydrocarbon that contains one or more carbon‐carbon double or triple bonds or benzene‐like rings. – Alkene: contains a carbon‐carbon double bond and has the general formula CnH2n. – Alkyne: contains a carbon‐carbon triple bond and has the general formula CnH2n‐2. Introduction Alkenes ● Hydrocarbons containing C=C ● Old name: olefins • Steroids • Hormones • Biochemical regulators 2 02/21/2019 • Alkynes – Hydrocarbons containing C≡C – Common name: acetylenes Unsaturated Hydrocarbons • Arene: benzene and its derivatives (Ch 9) 3 02/21/2019 Benzene and Phenyl Groups • We do not study benzene and its derivatives until Chapter 9. – However, we show structural formulas of compounds containing a phenyl group before that time. – The phenyl group is not reactive under any of the conditions we describe in chapters 5‐8. Structure of Alkenes • The two carbon atoms of a double bond and the four atoms bonded to them lie in a plane, with bond angles of approximately 120°. 4 02/21/2019 Structure of Alkenes • Figure 4.1 According to the orbital overlap model, a double bond consists of one bond formed by overlap of sp2 hybrid orbitals and one bond formed by overlap of parallel 2p orbitals. -
Stereospecific Fragmentations in the Mass Spectra of Stereoisomeric Isoindoloquinazolines
Stereospecific Fragmentations in the Mass Spectra of Stereoisomeric Isoindoloquinazolines Vladimir V. Ovcharenko and Kalevi Pihlaja Structural Chemistry Group, Department of Chemistry, University of Turku, Turku, Finland Ge´za Sta´jer Institute of Pharmaceutical Chemistry, University of Szeged, Szeged, Hungary The mass spectrometric behavior of stereo- and regioisomeric, partially saturated isoindolo- quinazolines was studied by positive-ion electron ionization (EI) and fast-atom bombardment (FAB/LSIMS) mass spectrometry combined with collision-induced dissociation (CID). A highly stereospecific retro-Diels-Alder process was observed in the cyclohexene-fused isomers under the EI conditions, and a corresponding (although less specific) fragmentation was observed in their FAB spectra. In the absence of RDA fragmentations, regio- and stereoisomers of the cyclohexane-fused heterocycles could be distinguished based on their FAB/CID spectra. (J Am Soc Mass Spectrom 2003, 14, 1049–1056) © 2003 American Society for Mass Spectrometry arious condensed-skeleton heterocycles contain- behavior of these compounds under the EI and FAB ing up to three rings can be prepared starting conditions is reported in the present study. Vfrom stereoisomeric aminobicycloalkanecar- The choice of experimental methods was dictated by boxylic acids by applying a retro-Diels-Alder (RDA) the following considerations. Mass-spectrometric RDA decomposition as a part of the synthetic strategy. For fragmentations often proceed in a regio- or stereospe- instance, the reaction of 3-aminobicyclo[2.2.1]hept-5- cific manner [4, 5]. The structure-specificity of RDA ene-2-carboxylic acid with formylbenzoic acid followed phenomena have previously been studied by us in the by a mild thermolysis of the pentacyclic intermediate mass spectra of stereoisomeric polycondensed hetero- afforded the novel 1,3-oxazino[2,3-a]indole-2,6-dione cycles using various ionization methods, such as elec- [1]. -
Reactions of Alkenes and Alkynes
05 Reactions of Alkenes and Alkynes Polyethylene is the most widely used plastic, making up items such as packing foam, plastic bottles, and plastic utensils (top: © Jon Larson/iStockphoto; middle: GNL Media/Digital Vision/Getty Images, Inc.; bottom: © Lakhesis/iStockphoto). Inset: A model of ethylene. KEY QUESTIONS 5.1 What Are the Characteristic Reactions of Alkenes? 5.8 How Can Alkynes Be Reduced to Alkenes and 5.2 What Is a Reaction Mechanism? Alkanes? 5.3 What Are the Mechanisms of Electrophilic Additions HOW TO to Alkenes? 5.1 How to Draw Mechanisms 5.4 What Are Carbocation Rearrangements? 5.5 What Is Hydroboration–Oxidation of an Alkene? CHEMICAL CONNECTIONS 5.6 How Can an Alkene Be Reduced to an Alkane? 5A Catalytic Cracking and the Importance of Alkenes 5.7 How Can an Acetylide Anion Be Used to Create a New Carbon–Carbon Bond? IN THIS CHAPTER, we begin our systematic study of organic reactions and their mecha- nisms. Reaction mechanisms are step-by-step descriptions of how reactions proceed and are one of the most important unifying concepts in organic chemistry. We use the reactions of alkenes as the vehicle to introduce this concept. 129 130 CHAPTER 5 Reactions of Alkenes and Alkynes 5.1 What Are the Characteristic Reactions of Alkenes? The most characteristic reaction of alkenes is addition to the carbon–carbon double bond in such a way that the pi bond is broken and, in its place, sigma bonds are formed to two new atoms or groups of atoms. Several examples of reactions at the carbon–carbon double bond are shown in Table 5.1, along with the descriptive name(s) associated with each. -
Acrylonitrile-Butadiene-Styrene Copolymer (ABS)
Eco-profiles of the European Plastics Industry Acrylonitrile-Butadiene-Styrene Copolymer (ABS) A report by I Boustead for Plastics Europe Data last calculated March 2005 abs 1 IMPORTANT NOTE Before using the data contained in this report, you are strongly recommended to look at the following documents: 1. Methodology This provides information about the analysis technique used and gives advice on the meaning of the results. 2. Data sources This gives information about the number of plants examined, the date when the data were collected and information about up-stream operations. In addition, you can also download data sets for most of the upstream operations used in this report. All of these documents can be found at: www.plasticseurope.org. Plastics Europe may be contacted at Ave E van Nieuwenhuyse 4 Box 3 B-1160 Brussels Telephone: 32-2-672-8259 Fax: 32-2-675-3935 abs 2 CONTENTS ABS..................................................................................................................................................4 ECO-PROFILE OF ABS ..............................................................................................................6 abs 3 ABS ABS takes its name from the initial letters of the three immediate precursors: acrylonitrile (CH 2=CH-CN) butadiene (CH 2=C-CH=CH 3) styrene (C 6H5-CH=CH 2) and is a two phase polymer system consisting of a glassy matrix of styrene- acrylonitrile copolymer and the synthetic rubber, styrene-butadiene copolymer. The optimal properties of this polymer are achieved by the appropriate grafting between the glassy and rubbery phases. ABS copolymers have toughness, temperature stability and solvent resistance properties superior to those of high impact polystyrene and are true engineering polymers. They can be formed using all of the common plastics techniques and can also be cold formed using techniques usually associated with metals. -
II. Nomenclature Rules for Alkenes 1. the Parent Name Will Be the Longest
1 Lecture 9 II. Nomenclature Rules For Alkenes 1. The parent name will be the longest carbon chain that contains both carbons of the double bond. Drop the -ane suffix of the alkane name and add the –ene suffix. Never name the double bond as a prefix. If a double bond is present, you have an alkene, not an alkane. alkane + -ene = alkene 2. Begin numbering the chain at the end nearest the double bond. Always number through the double bond and identify its position in the longest chain with the lower number. In the older IUPAC rules the number for the double bond was placed in front of the stem name with a hyphen. Under the newer rules, the number for the double bond is placed right in front of “ene”, with hyphens. We will use the newer rules for specifying the location of pi bonds. 1 2 3456 H3CCHCH CH 2 CH2 CH3 hex-2-ene (newer rules) 2-hexene (older rules) 3. Indicate the position of any substituent group by the number of the carbon atom in the parent (longest) chain to which it is attached. CH 1 2 345 3 H3CCHCHCHCH2 CH CH3 6 7 CH3 Numbering is determined by the double bond, not the branches, because the double bond has 5,6-dimethylhept-3-ene (newer rules) higher priority than any alkyl branch. 5,6-dimethyl-3-heptene (older rules) 4. Number cycloalkenes so that the double bond is 1,2 (number through the double bond). Number in the direction about the ring so that the lowest number is used at the first point of difference.