DOCSLIB.ORG

<I>Barriopsis Iraniana</I>

Total Page：16

File Type：pdf, Size：1020Kb

Download full-text PDF Read full-text
<I>Barriopsis Iraniana</I> Persoonia 23, 2009: 1–8 www.persoonia.org RESEARCH ARTICLE doi:10.3767/003158509X467552 Barriopsis iraniana and Phaeobotryon cupressi: two new species of the Botryosphaeriaceae from trees in Iran J. Abdollahzadeh1, E. Mohammadi Goltapeh1, A. Javadi2, M. Shams-bakhsh1, R. Zare2, A.J.L. Phillips3 Key words Abstract Species in the Botryosphaeriaceae are well known as pathogens and saprobes of woody hosts, but little is known about the species that occur in Iran. In a recent survey of this family in Iran two fungi with diplodia-like Citrus anamorphs were isolated from various tree hosts. These two fungi were fully characterised in terms of morphology EF 1-α of the anamorphs in culture, and sequences of the ITS1/ITS2 regions of the ribosomal DNA operon and partial ITS sequences of the translation elongation factor 1- . Phylogenetic analyses placed them within a clade consisting of Mangifera α Barriopsis and Phaeobotryon species, but they were clearly distinct from known species in these genera. There- Olea fore, they are described here as two new species, namely Barriopsis iraniana on Citrus, Mangifera and Olea, and phylogeny Phaeobotryon cupressi on Cupressus sempervirens. systematics taxonomy Article info Received: 27 April 2009; Accepted: 17 June 2009; Published: 16 July 2009. INTRODUCTION (Slippers et al. 2004), Olea (Lazzizera et al. 2008), Prunus (Slippers et al. 2007, Damm et al. 2007) and Protea (Denman Species of the Botryosphaeriaceae are cosmopolitan and occur et al. 2003, Marincowitz et al. 2008). Such studies have yielded on a wide range of plant hosts (von Arx & Müller 1954, Barr several new species, thus revealing the diversity within this 1987). They can be primary pathogens, opportunists, endo- family. Furthermore, intensive sampling in different regions of phytes or saprobes (Denman et al. 2000, Slippers & Wingfield the world has also revealed many new species (Pavlic et al. 2007). While the family is well circumscribed, segregation of 2008, Taylor et al. 2009). Despite the importance attributed to genera within the Botryosphaeriaceae has proven to be prob- the species in this family, there have been no studies on the lematic. Von Arx & Müller (1954) made extensive synonymies Botryosphaeriaceae in Iran. under Botryosphaeria and included several genera known In the course of a survey of Botryosphaeriaceae in Iran during to have pigmented ascospores. In this way they effectively 2005–2007, besides some 14 known species, two new species broadened the concept of Botryosphaeria to include species with diplodia-like conidia were encountered. The aim of the with hyaline ascospores, brown, aseptate ascospores, and present study was to characterise the species and to describe brown, 1-septate ascospores. At least 18 anamorph genera them based on DNA sequence data and morphology. have been associated with Botryosphaeria, including Diplodia, Lasiodiplodia, Fusicoccum and Sphaeropsis. Of these, only Fusicoccum and Diplodia were recognised by Denman et al. MATERIALS AND METHODS (2000), and this was supported by several studies (Jacobs & Rehner 1998, Zhou & Stanosz 2001, Alves et al. 2004). Pavlic Isolates and isolation et al. (2004) employed morphological and phylogenetic data Infected branches, fruits and leaves with various disease symp- to separate Lasiodiplodia from Diplodia. Later, Phillips et al. toms, including dieback, canker, rot and necrosis, were collected (2005) further broadened the concept by including Dothiorella from Cupressus sempervirens, Mangifera indica, Citrus sp. and within Botryosphaeria. Olea sp. in northern and southern provinces of Iran. Isolations In a phylogenetic study based on 28S rDNA sequence data, were made by transferring conidia to potato-dextrose agar (PDA; Crous et al. (2006) recognised 10 lineages within Botryo­ Difco Laboratories). After incubating at 25 °C for 12 h, single sphaeria corresponding to individual genera. A further lineage germinating conidia were transferred to fresh PDA plates. Some representing Aplosporella was subsequently added (Damm et isolates were obtained by plating pieces of tissue taken from al. 2007), and Phillips et al. (2008) recognised a further five the junction of the diseased and healthy areas of the samples, genera bringing the total to 16. after surface sterilisation (1–4 min in 70 % ethanol), on PDA supplemented with 100 mg chloramphenicol. Representative The Botryosphaeriaceae has been the subject of numerous isolates were deposited at the Iranian Research Institute of Plant critical studies on the species associated with different hosts Protection (IRAN, Tehran, Iran) and the Centraalbureau voor including grapevines (van Niekerk et al. 2004), Eucalyptus Schimmelcultures (CBS, Utrecht, The Netherlands). 1 Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modarres University, P.O. Box 14115-336, Tehran, Iran. Morphology 2 Department of Botany, Iranian Research Institute of Plant Protection, P.O. Sporulation was induced by culturing the isolates on 2 % tap Box 1454, Tehran 19395, Iran. water agar bearing pieces of double-autoclaved, halved pop- 3 Centro de Recursos Microbiológicos, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829- lar twigs or pine needles under near-ultraviolet light in a 12 h 516 Caparica, Portugal; corresponding author e-mail: [email protected]. light-dark regime for 2–6 wk at 25 °C. Vertical sections through © 2009 Nationaal Herbarium Nederland & Centraalbureau voor Schimmelcultures You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. 2 Persoonia – Volume 23, 2009 EU673306 EU017539 EU673291 AY573218 AY573227 EU673310 AY573219 AY573220 DQ458874 AY573222 EU673278 AY57322 DQ458877 EF622064 EF622063 AY573217 EU673277 AY573221 FJ919662 FJ919661 FJ919659 FJ919658 FJ919660 EU673298 EU673299 EU673294 EU673295 AY343340 EU673292 EU673293 AY905559 AY905562 EF AY236898 AY573235 EF622057 EF622059 AY236888 EU673296 FJ919652 FJ919654 FJ919656 FJ919657 FJ919655 FJ919653 DQ458869 EU673307 EU673309 2 EU673337 DQ299245 DQ299247 AY259092 AY259100 AY259090 AY259093 AY259094 DQ458889 AY573202 AY573198 AY573206 DQ458892 EF622084 EF622083 AY259091 EU673311 AY259098 FJ919673 FJ919672 FJ919670 FJ919669 FJ919671 EU673332 EU673333 EU673328 EU673329 AY343379 EU673324 EU673325 AY905554 AY905555 ITS GenBank AY236949 AY573212 EF622077 EF622080 AY236943 EU673330 FJ919663 FJ919665 FJ919667 FJ919668 FJ919666 FJ919664 DQ458886 EU673338 EU673340 Unknown P.V. Oudemans P.V. R.D. Millholland A.J.L. Phillips Alves A. Trapero M.E.A. Sánchez & A.J.L. Phillips A.J.L. Phillips L. Mugnai J. Luque Trapero M.E.A. Sánchez & A.J.L. Phillips D. Pavlic O. Rangel O. Rangel A.J.L. Phillips A.J.L. Phillips A.J.L. Phillips M.A.Aghajani M.A.Aghajani M.A.Aghajani M.A.Aghajani M.A.Aghajani Gams W. Gams W. Johnston & B.C.S.R. Paulus Pennycook, P.R. Johnston & B.C.S.R. Paulus Pennycook, P.R. J.M. van Niekerk H.A.Aa van der Graefenhan T. J. Luque & S. Martos J. Luque & S. Martos Collector B. Slippers E.A. Ellis J. Carranza-Velásquez Unknown G.J. Samuels N.E. Stevens A. Javadi Abdollahzadeh & J. A. Javadi Abdollahzadeh & J. A. Javadi Abdollahzadeh & J. A. Javadi Abdollahzadeh & J. A. Javadi Abdollahzadeh & J. A. Javadi Abdollahzadeh & J. L.L. Huillier H.S. Fawcett Garcia F. UK USA USA Portugal Portugal Spain Portugal Portugal Italy Spain Spain Netherlands Africa South Colombia Colombia Portugal Portugal Portugal Gorgan, Iran Gorgan, Iran Gorgan, Iran Gorgan, Iran Gorgan, Iran Hawaii Hawaii New Zealand New Zealand Africa South Luxembourg Germany Spain Spain Locality Switzerland UK Costa Rica Zaire New Zealand Cuba Minab, Iran Rodan, Iran Minab, Iran Minab, Iran Minab, Iran Minab, Iran USA USA Spain partial sequence. α sp. -field soil -field soil sp. sp. sp. sp sp. sp. sp. sp. sp. keratomycosis in eye Citrus Mangifera indica Olea Citrus Citrus Citrus Mangifera indica corymbosum Vaccinium Vaccinium vinifera Vitis Prunus Quercus suber Quercus ilex vinifera Vitis Phoenix dactylifera vinifera Vitis Vitis Quercus ilex Quercus suber Ulmus Malus pumila Syzygium cordatum Cassava Cassava Gmelina arborea Coffea Phoenix dactylifera Phoenix dactylifera vinifera Vitis vinifera Vitis Populus nigra vinifera Vitis Cupressus sempervirens Cupressus sempervirens Cupressus sempervirens Cupressus sempervirens Cupressus sempervirens Sophora chrysophylla Sophora chrysophylla Citrus sinensis Citrus sinensis vinifera Vitis album Viscum album Viscum vinifera Vitis vinifera Vitis Substrate 1 CBS 174.26 IRAN1448C CBS 110302 CBS 112549 CBS 115041 IMI 63581b CBS 448.91 CPC 12440 CBS 112553 CBS 112555 CBS 169.34 IRAN1454C ATCC22927 CMW 8000 CBS 112546 CBS 230.30 CBS 119049 CBS 113188 CBS 456.78 CBS 110497 IRAN1455C IRAN1456C IRAN1457C IRAN1458C CPC 12442 16818 ICMP CBS 186.97 CBS 117006 Culture no. CBS119047 CBS 115812 CBS 494.78 CBS 110299 CMW 9081 16812 ICMP CBS 110496 CBS
Load more

Recommended publications
  • Phylogeny and Morphology of Four New Species of Lasiodiplodia from Iran
    Persoonia 25, 2010: 1–10 www.persoonia.org RESEARCH ARTICLE doi:10.3767/003158510X524150 Phylogeny and morphology of four new species of Lasiodiplodia from Iran J. Abdollahzadeh 1,3, A. Javadi 2, E. Mohammadi Goltapeh3, R. Zare 2, A.J.L. Phillips 4 Key words Abstract Four new species of Lasiodiplodia; L. citricola, L. gilanensis, L. hormozganensis and L. iraniensis from various tree species in Iran are described and illustrated. The ITS and partial translation elongation factor-1 se- Botryosphaeriaceae α quence data were analysed to investigate their phylogenetic relationships with other closely related species and EF-1α genera. The four new species formed well-supported clades within Lasiodiplodia and were morphologically distinct ITS from all other known species. Lasiodiplodia phylogeny Article info Received: 11 March 2010; Accepted: 29 June 2010; Published: 27 July 2010. taxonomy INTRODUCTION as synonyms of L. theobromae since he could not separate them on morphological characters. However, on account of its Members of the Botryosphaeriaceae (Botryosphaeriales, morphological variability and wide host range it seems likely that Dothideomycetes, Ascomycota) are cosmopolitan and occur L. theobromae is a species complex. Recent studies based on on a wide range of monocotyledonous, dicotyledonous and sequence data have confirmed this and eight new species have gymnosperm hosts (von Arx & Müller 1954, Barr 1987). They been described since 2004 (Pavlic et al. 2004, 2008, Burgess are associated with various symptoms such as shoot blights, et al. 2006, Damm et al. 2007, Alves et al. 2008). stem cankers, fruit rots, dieback and gummosis (von Arx 1987) There have been no studies on the Lasiodiplodia species in and are also known as endophytes (Slippers & Wingfield Iran apart from a few reports of L.
    [Show full text]
  • <I>Botryosphaeriales</I>
    Persoonia 33, 2014: 155–168 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X684780 Confronting the constraints of morphological taxonomy in the Botryosphaeriales B. Slippers1, J. Roux2, M.J. Wingfield1, F.J.J. van der Walt2, F. Jami2, J.W.M. Mehl2, G.J. Marais3 Key words Abstract Identification of fungi and the International Code of Nomenclature underpinning this process, rests strongly on the characterisation of morphological structures. Yet, the value of these characters to define species in Botryosphaeriales many groups has become questionable or even superfluous. This has emerged as DNA-based techniques have morphotaxa increasingly revealed cryptic species and species complexes. This problem is vividly illustrated in the present phylogeny study where 105 isolates of the Botryosphaeriales were recovered from both healthy and diseased woody tissues taxonomy of native Acacia spp. in Namibia and South Africa. Thirteen phylogenetically distinct groups were identified based tree health on Internal Transcribed Spacer (ITS) rDNA PCR-RFLP and translation elongation factor 1-α (TEF1-α) sequence data, two loci that are known to be reliable markers to distinguish species in the Botryosphaeriales. Four of these groups could be linked reliably to sequence data for formerly described species, including Botryosphaeria dothidea, Dothiorella dulcispinae, Lasiodiplodia pseudotheobromae and Spencermartinsia viticola. Nine groups, however, could not be linked to any other species known from culture and for which sequence data are available. These groups are, therefore, described as Aplosporella africana, A. papillata, Botryosphaeria auasmontanum, Dothiorella capri-amissi, Do. oblonga, Lasiodiplodia pyriformis, Spencermartinsia rosulata, Sphaeropsis variabilis and an un- described Neofusicoccum sp.
    [Show full text]
  • PERSOONIAL R Eflections
    Persoonia 23, 2009: 177–208 www.persoonia.org doi:10.3767/003158509X482951 PERSOONIAL R eflections Editorial: Celebrating 50 years of Fungal Biodiversity Research The year 2009 represents the 50th anniversary of Persoonia as the message that without fungi as basal link in the food chain, an international journal of mycology. Since 2008, Persoonia is there will be no biodiversity at all. a full-colour, Open Access journal, and from 2009 onwards, will May the Fungi be with you! also appear in PubMed, which we believe will give our authors even more exposure than that presently achieved via the two Editors-in-Chief: independent online websites, www.IngentaConnect.com, and Prof. dr PW Crous www.persoonia.org. The enclosed free poster depicts the 50 CBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT most beautiful fungi published throughout the year. We hope Utrecht, The Netherlands. that the poster acts as further encouragement for students and mycologists to describe and help protect our planet’s fungal Dr ME Noordeloos biodiversity. As 2010 is the international year of biodiversity, we National Herbarium of the Netherlands, Leiden University urge you to prominently display this poster, and help distribute branch, P.O. Box 9514, 2300 RA Leiden, The Netherlands. Book Reviews Mu«enko W, Majewski T, Ruszkiewicz- The Cryphonectriaceae include some Michalska M (eds). 2008. A preliminary of the most important tree pathogens checklist of micromycetes in Poland. in the world. Over the years I have Biodiversity of Poland, Vol. 9. Pp. personally helped collect populations 752; soft cover. Price 74 €. W. Szafer of some species in Africa and South Institute of Botany, Polish Academy America, and have witnessed the of Sciences, Lubicz, Kraków, Poland.
    [Show full text]
  • (Botryosphaeriales) from Russia
    Mycosphere 7 (7): 933–941 (2016) www.mycosphere.org ISSN 2077 7019 Article – special issue Doi 10.5943/mycosphere/si/1b/2 Copyright © Guizhou Academy of Agricultural Sciences Phaeobotryon negundinis sp. nov. (Botryosphaeriales) from Russia 1, 2 2, 3 4 4 5 Daranagama DA , Thambugala KM , Campino B , Alves A , Bulgakov TS , Phillips AJL6, Liu XZ1, Hyde KD2 1. State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No 3 1st West Beichen Road, Chaoyang District, Beijing, 100101, People’s Republic of China. 2. Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3. Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang 550006, Guizhou, People’s Republic of China 4. Departamento de Biologia, CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal. 5. Academy of Biology and Biotechnology, Southern Federal University, Rostov-on-Don 344090, Rostov region, Russia 6. University of Lisbon, Faculty of Sciences, Biosystems and Integrative Sciences Institute (BioISI), Campo Grande, 1749-016 Lisbon, Portugal Daranagama DA, Thambugala KM, Campino B, Alves A, Bulgakov TS, Phillips AJL, Liu XZ, Hyde KD 2016 – Phaeobotryon negundinis sp. nov. (Botryosphaeriales) from Russia. Mycosphere 7(7), 933–941, Doi 10.5943/mycosphere/si/1b/2 Abstract A new species of Phaeobotryon was collected from Acer negundo, Forsythia × intermedia and Ligustrum vulgare from European Russia. Morphological and phylogenetic analyses of combined ITS, β-tubulin and EF1-α sequence data revealed that these collections differ from all other species in the genus. Therefore it is introduced here as Phaeobotryon negundinis sp.
    [Show full text]
  • Barriopsis Iraniana and Phaeobotryon Cupressi: Two New Species of the Botryosphaeriaceae from Trees in Iran
    Persoonia 23, 2009: 1–8 www.persoonia.org RESEARCH ARTICLE doi:10.3767/003158509X467552 Barriopsis iraniana and Phaeobotryon cupressi: two new species of the Botryosphaeriaceae from trees in Iran J. Abdollahzadeh1, E. Mohammadi Goltapeh1, A. Javadi2, M. Shams-bakhsh1, R. Zare2, A.J.L. Phillips3 Key words Abstract Species in the Botryosphaeriaceae are well known as pathogens and saprobes of woody hosts, but little is known about the species that occur in Iran. In a recent survey of this family in Iran two fungi with diplodia-like Citrus anamorphs were isolated from various tree hosts. These two fungi were fully characterised in terms of morphology EF 1-α of the anamorphs in culture, and sequences of the ITS1/ITS2 regions of the ribosomal DNA operon and partial ITS sequences of the translation elongation factor 1- . Phylogenetic analyses placed them within a clade consisting of Mangifera α Barriopsis and Phaeobotryon species, but they were clearly distinct from known species in these genera. There- Olea fore, they are described here as two new species, namely Barriopsis iraniana on Citrus, Mangifera and Olea, and phylogeny Phaeobotryon cupressi on Cupressus sempervirens. systematics taxonomy Article info Received: 27 April 2009; Accepted: 17 June 2009; Published: 16 July 2009. INTRODUCTION (Slippers et al. 2004), Olea (Lazzizera et al. 2008), Prunus (Slippers et al. 2007, Damm et al. 2007) and Protea (Denman Species of the Botryosphaeriaceae are cosmopolitan and occur et al. 2003, Marincowitz et al. 2008). Such studies have yielded on a wide range of plant hosts (von Arx & Müller 1954, Barr several new species, thus revealing the diversity within this 1987).
    [Show full text]
  • Multigene Phylogeny and Morphology Reveal Phaeobotryon Rhois Sp
    Phytotaxa 205 (2): 090–098 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.205.2.2 Multigene phylogeny and morphology reveal Phaeobotryon rhois sp. nov. (Botryosphaeriales, Ascomycota) XINLEI FAN 1, KEVIN D. HYDE 3, 4, JIANKUI LIU 4, YINGMEI LIANG 2 & CHENGMING TIAN 1* 1 The Key Laboratory for Silviculture and Conservation of Ministry of Education, Beijing Forestry University, Beijing 100083, China 2 Museum of Beijing Forestry University, Beijing 100083, China 3 International Fungal Research & Development Centre, The Research Institute of Resource Insects, Chinese Academy of Forestry, Bailongsi, Kunming 650224, China 4 School of Science, Mae Fah Luang University, Chaing Rai 57100, Thailand * Correspondence author: [email protected] Abstract The family Botryosphaeriaceae encompasses important plant-associated pathogens, endophytes and saprobes with a wide geographical and host distribution. Two dark-spored botryosphaeriaceous taxa associated with Rhus typhina dieback and canker disease were collected from Ningxia Province, in northwestern China. Morphology and multigene analysis (ITS, LSU and EF-1α) clearly distinguished this clade as a distinct species in the genus. Phaeobotryon rhois is introduced and illustrated as a new species in this paper. The species is characterized by its globose, unilocular fruiting bodies and small, brown, 1-septate conidia. It can be distinguished from the similar species P. cercidis, P. cupressi, P. mamane and P. querci- cola based on host association and conidial size and colour. Key words: biodiversity, Botryosphaeriaceae, molecular phylogeny, new species, taxonomy Introduction Phaeobotryon (Botryosphaeriaceae) was established by Theissen & Sydow (1915) to accommodate Dothidea cercidis Cooke and subsequently entered a long period of confusion with a broad concept of the Botryosphaeria species.
    [Show full text]
  • Development of an Efficient Tef-1Α RNA Hairpin Structure to Efficient
    www.nature.com/scientificreports OPEN Development of an efcient Tef‑1α RNA hairpin structure to efcient management of Lasiodiplodia theobromae and Neofusicoccum parvum Omid Nili, Abdolbaset Azizi * & Jafar Abdollahzadeh * Lasiodiplodia theobromae and Neofusicoccum parvum are serious worldwide-distributed plant pathogenic fungi with a wide host range in tropical and temperate climates. They cause fruit rot, canker, and dieback of twigs in various woody plants. Protection of pruning wounds using fungicides is the prevalent strategy for the management of the diseases caused by these fungi. Chemical control of plant diseases is not environmentally safe and the residues of fungicides are a threat to nature. Furthermore, genetic resources of resistance to plant diseases in woody plants are limited. The aim of this study was to investigate the efciency of RNA silencing using an efcient hairpin structure based on Tef‑1α gene for the management of L. theobromae and N. parvum. Hairpin structure of Tef‑1α was cloned in pFGC5941 binary vector and the recombinant construct was named pFGC-TEF-d. Transient expression of pFGC-TEF-d using Agrobacterium LBA4404 in grapevine (Bidaneh Sefd cv.) and strawberry cultivars (Camarosa and Ventana) led to a reduction in disease progress of L. theobromae. The disease reduction in grapevine was estimated by 55% and in strawberries cultivars Camarosa and Ventana by 58% and 93%, respectively. Further analysis of transient expression of pFGC-TEF-d in strawberry (Camarosa) shown disease reduction using Neofusicoccum parvum. Here we introduce RNAi silencing using pFGC-TEF-d construct as an efcient strategy to the management of L. theobromae and N. parvum for the frst time.
    [Show full text]
  • EU Project Number 613678
    EU project number 613678 Strategies to develop effective, innovative and practical approaches to protect major European fruit crops from pests and pathogens Work package 1. Pathways of introduction of fruit pests and pathogens Deliverable 1.3. PART 7 - REPORT on Oranges and Mandarins – Fruit pathway and Alert List Partners involved: EPPO (Grousset F, Petter F, Suffert M) and JKI (Steffen K, Wilstermann A, Schrader G). This document should be cited as ‘Grousset F, Wistermann A, Steffen K, Petter F, Schrader G, Suffert M (2016) DROPSA Deliverable 1.3 Report for Oranges and Mandarins – Fruit pathway and Alert List’. An Excel file containing supporting information is available at https://upload.eppo.int/download/112o3f5b0c014 DROPSA is funded by the European Union’s Seventh Framework Programme for research, technological development and demonstration (grant agreement no. 613678). www.dropsaproject.eu [email protected] DROPSA DELIVERABLE REPORT on ORANGES AND MANDARINS – Fruit pathway and Alert List 1. Introduction ............................................................................................................................................... 2 1.1 Background on oranges and mandarins ..................................................................................................... 2 1.2 Data on production and trade of orange and mandarin fruit ........................................................................ 5 1.3 Characteristics of the pathway ‘orange and mandarin fruit’ .......................................................................
    [Show full text]
  • Striatiguttulaceae, a New Pleosporalean Family to Accommodate Longicorpus and Striatiguttula Gen
    A peer-reviewed open-access journal MycoKeys 49:Striatiguttulaceae 99–129 (2019) , a new pleosporalean family to accommodate Longicorpus and... 99 doi: 10.3897/mycokeys.49.30886 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Striatiguttulaceae, a new pleosporalean family to accommodate Longicorpus and Striatiguttula gen. nov. from palms Sheng-Nan Zhang1,2,3,4, Kevin D. Hyde4, E.B. Gareth Jones5, Rajesh Jeewon6, Ratchadawan Cheewangkoon3, Jian-Kui Liu1,2 1 Center for Bioinformatics, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, P.R. China 2 Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Science, Guiyang 550006, P.R. China 3 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand4 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand5 Nantgaredig 33B St. Edwards Road, Southsea, Hants, UK 6 Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius, 80837, Mauritius Corresponding author: Jian-Kui Liu ([email protected]) Academic editor: G. Mugambi | Received 28 October 2018 | Accepted 29 January 2019 | Published 1 April 2019 Citation: Zhang S-N, Hyde KD, Jones EBG, Jeewon R, Cheewangkoon R, Liu J-K (2019) Striatiguttulaceae, a new pleosporalean family to accommodate Longicorpus and Striatiguttula gen. nov. from palms. MycoKeys 49: 99–129. https://doi.org/10.3897/mycokeys.49.30886 Abstract Palms represent the most morphological diverse monocotyledonous plants and support a vast array of fungi. Recent examinations of palmicolous fungi in Thailand led to the discovery of a group of morpho- logically similar and interesting taxa.
    [Show full text]
  • Phylogeny and Morphology of Neodeightonia Palmicola Sp. Nov
    ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Sydowia Jahr/Year: 2010 Band/Volume: 062 Autor(en)/Author(s): Liu Jian-Kui, Chomnunti Putarak, Cai Lei, Phookamsak Rungtiwa, Chukeatirote Ekachai, Jones E. B. Gareth, Moslem Mohamed A., Hyde Kevin D. Artikel/Article: Phylogeny and morphology of Neodeightonia palmicola sp. nov. from palms 261-276 Phylogeny and morphology of Neodeightonia palmicola sp. nov. from palms Jian-Kui Liu1, Putarak Chomnunti1, Lei Cai2, Rungtiwa Phookamsak1, Ekachai Chukeatirote1, E.B.G. Jones3, Mohamed Moslem4 & Kevin. D. Hyde1*,4 1 School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 2 Key Laboratory of Systematic Mycology & Lichenology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, P.R. China 3 BIOTEC Central Research Unit, National Center for Genetic Engineering and Biotechnology, 113 Thailand Science Park, Bangkok, 12120, Thailand 4 King Saud University, College of Science, Botany and Microbiology Department, P.O. Box: 2455, Riyadh 1145, Saudi Arabia Liu J.K., Chomnunti P., Cai L., Phookamsak R., Chukeatirote R., Jones E.B.G., Moslem M. & Hyde K.D. (2010) Phylogeny and morphology of Neodeightonia palmi- cola sp. nov. from palms. – Sydowia 62 (2): 261–276. Palm fungi are a taxonomically diverse group. Recent collections of fungi from palms in northern Thailand resulted in the discovery of a new species of Neodeight- onia, herein described as N. palmicola. This new species is distinct in having hya- line, aseptate ascospores surrounded by a remarkable sheath. This study compares this new species with related taxa of Botryosphaeria and Neodeightonia using mor- phological and molecular characteristics.
    [Show full text]
  • Proposed Generic Names for Dothideomycetes
    Naming and outline of Dothideomycetes–2014 Nalin N. Wijayawardene1, 2, Pedro W. Crous3, Paul M. Kirk4, David L. Hawksworth4, 5, 6, Dongqin Dai1, 2, Eric Boehm7, Saranyaphat Boonmee1, 2, Uwe Braun8, Putarak Chomnunti1, 2, , Melvina J. D'souza1, 2, Paul Diederich9, Asha Dissanayake1, 2, 10, Mingkhuan Doilom1, 2, Francesco Doveri11, Singang Hongsanan1, 2, E.B. Gareth Jones12, 13, Johannes Z. Groenewald3, Ruvishika Jayawardena1, 2, 10, James D. Lawrey14, Yan Mei Li15, 16, Yong Xiang Liu17, Robert Lücking18, Hugo Madrid3, Dimuthu S. Manamgoda1, 2, Jutamart Monkai1, 2, Lucia Muggia19, 20, Matthew P. Nelsen18, 21, Ka-Lai Pang22, Rungtiwa Phookamsak1, 2, Indunil Senanayake1, 2, Carol A. Shearer23, Satinee Suetrong24, Kazuaki Tanaka25, Kasun M. Thambugala1, 2, 17, Saowanee Wikee1, 2, Hai-Xia Wu15, 16, Ying Zhang26, Begoña Aguirre-Hudson5, Siti A. Alias27, André Aptroot28, Ali H. Bahkali29, Jose L. Bezerra30, Jayarama D. Bhat1, 2, 31, Ekachai Chukeatirote1, 2, Cécile Gueidan5, Kazuyuki Hirayama25, G. Sybren De Hoog3, Ji Chuan Kang32, Kerry Knudsen33, Wen Jing Li1, 2, Xinghong Li10, ZouYi Liu17, Ausana Mapook1, 2, Eric H.C. McKenzie34, Andrew N. Miller35, Peter E. Mortimer36, 37, Dhanushka Nadeeshan1, 2, Alan J.L. Phillips38, Huzefa A. Raja39, Christian Scheuer19, Felix Schumm40, Joanne E. Taylor41, Qing Tian1, 2, Saowaluck Tibpromma1, 2, Yong Wang42, Jianchu Xu3, 4, Jiye Yan10, Supalak Yacharoen1, 2, Min Zhang15, 16, Joyce Woudenberg3 and K. D. Hyde1, 2, 37, 38 1Institute of Excellence in Fungal Research and 2School of Science, Mae Fah Luang University,
    [Show full text]
  • Phylogeny and Taxonomy of Botryosphaeria and Neofusicoccum Species in Iran, with Description of Botryosphaeria Scharifii Sp
    Mycologia, 105(1), 2013, pp. 210–220. DOI: 10.3852/12-107 # 2013 by The Mycological Society of America, Lawrence, KS 66044-8897 Phylogeny and taxonomy of Botryosphaeria and Neofusicoccum species in Iran, with description of Botryosphaeria scharifii sp. nov. Jafar Abdollahzadeh1 are well known fungi associated with these symptoms Department of Plant Protection, Faculty of Agriculture, worldwide. University of Kurdistan, PO Box 416, Sanandaj, Iran Based on extensive phylogenetic studies 18 Rasoul Zare different genera including Botryosphaeria (anam. Department of Botany, Iranian Research Institute of Fusicoccum)andNeofusicoccum have been described Plant Protection, PO Box 1454, Tehran 19395, Iran in this family (Phillips et al. 2008; Rojas et al. 2008; Phillips and Alves 2009). The genus Botryosphaeria Alan J.L. Phillips was described 150 y ago (Cesati and de Notaris Centro de Recursos Microbiolo´gicos, Departamento de 1863). Phylogenetic analysis based on LSU sequence Cieˆncias da Vida, Faculdade de Cieˆncias e Tecnologia, Universidade Nova de Lisboa, 2829-516 Caparica, data together with morphological characteristics by Portugal Crous et al. (2006) divided Botryosphaeria into 10 lineages representing 10 distinct genera including Neofusicoccum and Pseudofusicoccum.Mostofthe Abstract: Species of Botryosphaeriaceae are impor- species were transferred to Neofusicoccum. Fusicoc- tant pathogens and endophytes associated with woody cum stromaticum was transferred to Pseudofusicoc- plants. Botryosphaeria and Neofusicoccum are two well cum,andonlyBotryosphaeria dothidea, B. mamane known genera of the family. In this study 125 isolates and B. corticis were retained in Botryosphaeria.More morphologically resembling members of this family recently F. ramosum (Pavlic et al. 2008), F. atrovirens were collected from about 20 different fruit and forest (Mehl et al.
    [Show full text]