Chipmunks (Genus Tamias) in the Northern Rocky Mountains
Evolution, 57(8), 2003, pp. 1900±1916 PHYLOGEOGRAPHY AND INTROGRESSIVE HYBRIDIZATION: CHIPMUNKS (GENUS TAMIAS) IN THE NORTHERN ROCKY MOUNTAINS JEFFREY M. GOOD,1,2 JOHN R. DEMBOSKI,3 DAVID W. NAGORSEN,4,5 AND JACK SULLIVAN1 1Department of Biological Sciences, Box 443051, University of Idaho, Moscow, Idaho 83844-3051 3Biological Sciences Department, California State Polytechnic University, Pomona, 3801 West Temple Avenue, Pomona, California 91768-4032 4Royal British Columbia Museum, Victoria, British Columbia V8V 1X4, Canada Abstract. If phylogeographic studies are to be broadly used for assessing population-level processes relevant to speciation and systematics, the ability to identify and incorporate instances of hybridization into the analytical frame- work is essential. Here, we examine the evolutionary history of two chipmunk species, Tamias ru®caudus and Tamias amoenus, in the northern Rocky Mountains by integrating multivariate morphometrics of bacular (os penis) variation, phylogenetic estimation, and nested clade analysis with regional biogeography. Our results indicate multiple examples of mitochondrial DNA introgression layered within the evolutionary history of these nonsister species. Three of these events are most consistent with recent and/or ongoing asymmetric introgression of mitochondrial DNA across mor- phologically de®ned secondary contact zones. In addition, we ®nd preliminary evidence where a fourth instance of nonconcordant characters may represent complete ®xation of introgressed mitochondrial DNA via a more ancient hybridization event, although alternative explanations of convergence or incomplete sorting of ancestral polymorphisms cannot be dismissed with these data. The demonstration of hybridization among chipmunks with strongly differentiated bacular morphology contradicts long-standing assumptions that variation within this character is diagnostic of complete reproductive isolation within Tamias.
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