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3 Embryology and Development
BIOL 6505 − INTRODUCTION TO FETAL MEDICINE 3. EMBRYOLOGY AND DEVELOPMENT Arlet G. Kurkchubasche, M.D. INTRODUCTION Embryology – the field of study that pertains to the developing organism/human Basic embryology –usually taught in the chronologic sequence of events. These events are the basis for understanding the congenital anomalies that we encounter in the fetus, and help explain the relationships to other organ system concerns. Below is a synopsis of some of the critical steps in embryogenesis from the anatomic rather than molecular basis. These concepts will be more intuitive and evident in conjunction with diagrams and animated sequences. This text is a synopsis of material provided in Langman’s Medical Embryology, 9th ed. First week – ovulation to fertilization to implantation Fertilization restores 1) the diploid number of chromosomes, 2) determines the chromosomal sex and 3) initiates cleavage. Cleavage of the fertilized ovum results in mitotic divisions generating blastomeres that form a 16-cell morula. The dense morula develops a central cavity and now forms the blastocyst, which restructures into 2 components. The inner cell mass forms the embryoblast and outer cell mass the trophoblast. Consequences for fetal management: Variances in cleavage, i.e. splitting of the zygote at various stages/locations - leads to monozygotic twinning with various relationships of the fetal membranes. Cleavage at later weeks will lead to conjoined twinning. Second week: the week of twos – marked by bilaminar germ disc formation. Commences with blastocyst partially embedded in endometrial stroma Trophoblast forms – 1) cytotrophoblast – mitotic cells that coalesce to form 2) syncytiotrophoblast – erodes into maternal tissues, forms lacunae which are critical to development of the uteroplacental circulation. -
Original Article Upregulation of HOXA13 As a Potential Tumorigenesis and Progression Promoter of LUSC Based on Qrt-PCR and Bioinformatics
Int J Clin Exp Pathol 2017;10(10):10650-10665 www.ijcep.com /ISSN:1936-2625/IJCEP0065149 Original Article Upregulation of HOXA13 as a potential tumorigenesis and progression promoter of LUSC based on qRT-PCR and bioinformatics Rui Zhang1*, Yun Deng1*, Yu Zhang1, Gao-Qiang Zhai1, Rong-Quan He2, Xiao-Hua Hu2, Dan-Ming Wei1, Zhen-Bo Feng1, Gang Chen1 Departments of 1Pathology, 2Medical Oncology, First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi Zhuang Autonomous Region, China. *Equal contributors. Received September 7, 2017; Accepted September 29, 2017; Epub October 1, 2017; Published October 15, 2017 Abstract: In this study, we investigated the levels of homeobox A13 (HOXA13) and the mechanisms underlying the co-expressed genes of HOXA13 in lung squamous cancer (LUSC), the signaling pathways in which the co-ex- pressed genes of HOXA13 are involved and their functional roles in LUSC. The clinical significance of 23 paired LUSC tissues and adjacent non-tumor tissues were gathered. HOXA13 levels in LUSC were detected by quantita- tive real-time polymerase chain reaction (qRT-PCR). HOXA13 levels in LUSC from The Cancer Genome Atlas (TCGA) and Oncomine were analyzed. We performed receiver operator characteristic (ROC) curves of various clinicopath- ological features of LUSC. Co-expressed of HOXA13 were collected from MEM, cBioPortal and GEPIA. The func- tions and pathways of the most reliable overlapped genes were achieved from the Gene Otology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases, respectively. The protein-protein interaction (PPI) net- works were mapped using STRING. HOXA13 in LUSC were markedly upregulated compared with those in the non- cancerous controls as demonstrated by qRT-PCR (LUSC: 0.330±0.360; CONTROLS: 0.155±0.142; P=0.021). -
Defining the Molecular Pathologies in Cloaca Malformation: Similarities Between Mouse and Human Laura A
© 2014. Published by The Company of Biologists Ltd | Disease Models & Mechanisms (2014) 7, 483-493 doi:10.1242/dmm.014530 RESEARCH ARTICLE Defining the molecular pathologies in cloaca malformation: similarities between mouse and human Laura A. Runck1, Anna Method1, Andrea Bischoff2, Marc Levitt2, Alberto Peña2, Margaret H. Collins3, Anita Gupta3, Shiva Shanmukhappa3, James M. Wells1,4 and Géraldine Guasch1,* ABSTRACT INTRODUCTION Anorectal malformations are congenital anomalies that form a Anorectal malformations are congenital anomalies that encompass spectrum of disorders, from the most benign type with excellent a wide spectrum of diseases and occur in ~1 in 5000 live births functional prognosis, to very complex, such as cloaca malformation (Levitt and Peña, 2007). The anorectal and urogenital systems arise in females in which the rectum, vagina and urethra fail to develop from a common transient embryonic structure called the cloaca that separately and instead drain via a single common channel into the exists from the fourth week of intrauterine development in humans perineum. The severity of this phenotype suggests that the defect (Fritsch et al., 2007; Kluth, 2010) and between days 10.5-12.5 post- occurs in the early stages of embryonic development of the organs fertilization in mice (Seifert et al., 2008). By the sixth week in derived from the cloaca. Owing to the inability to directly investigate humans the embryonic cloaca is divided, resulting in a ventral human embryonic cloaca development, current research has relied urogenital sinus and a separate dorsal hindgut. By the twelfth week, on the use of mouse models of anorectal malformations. However, the anal canal, vaginal and urethral openings are established. -
Te2, Part Iii
TERMINOLOGIA EMBRYOLOGICA Second Edition International Embryological Terminology FIPAT The Federative International Programme for Anatomical Terminology A programme of the International Federation of Associations of Anatomists (IFAA) TE2, PART III Contents Caput V: Organogenesis Chapter 5: Organogenesis (continued) Systema respiratorium Respiratory system Systema urinarium Urinary system Systemata genitalia Genital systems Coeloma Coelom Glandulae endocrinae Endocrine glands Systema cardiovasculare Cardiovascular system Systema lymphoideum Lymphoid system Bibliographic Reference Citation: FIPAT. Terminologia Embryologica. 2nd ed. FIPAT.library.dal.ca. Federative International Programme for Anatomical Terminology, February 2017 Published pending approval by the General Assembly at the next Congress of IFAA (2019) Creative Commons License: The publication of Terminologia Embryologica is under a Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0) license The individual terms in this terminology are within the public domain. Statements about terms being part of this international standard terminology should use the above bibliographic reference to cite this terminology. The unaltered PDF files of this terminology may be freely copied and distributed by users. IFAA member societies are authorized to publish translations of this terminology. Authors of other works that might be considered derivative should write to the Chair of FIPAT for permission to publish a derivative work. Caput V: ORGANOGENESIS Chapter 5: ORGANOGENESIS -
Evaluating and Treating the Reproductive System
18_Reproductive.qxd 8/23/2005 11:44 AM Page 519 CHAPTER 18 Evaluating and Treating the Reproductive System HEATHER L. BOWLES, DVM, D ipl ABVP-A vian , Certified in Veterinary Acupuncture (C hi Institute ) Reproductive Embryology, Anatomy and Physiology FORMATION OF THE AVIAN GONADS AND REPRODUCTIVE ANATOMY The avian gonads arise from more than one embryonic source. The medulla or core arises from the meso- nephric ducts. The outer cortex arises from a thickening of peritoneum along the root of the dorsal mesentery within the primitive gonadal ridge. Mesodermal germ cells that arise from yolk-sac endoderm migrate into this gonadal ridge, forming the ovary. The cells are initially distributed equally to both sides. In the hen, these germ cells are then preferentially distributed to the left side, and migrate from the right to the left side as well.58 Some avian species do in fact have 2 ovaries, including the brown kiwi and several raptor species. Sexual differ- entiation begins by day 5 in passerines and domestic fowl and by day 11 in raptor species. Differentiation of the ovary is characterized by development of the cortex, while the medulla develops into the testis.30,58 As the embryo develops, the germ cells undergo three phases of oogenesis. During the first phase, the oogonia actively divide for a defined time period and then stop at the first prophase of the first maturation division. During the second phase, the germ cells grow in size to become primary oocytes. This occurs approximately at the time of hatch in domestic fowl. During the third phase, oocytes complete the first maturation division to 18_Reproductive.qxd 8/23/2005 11:44 AM Page 520 520 Clinical Avian Medicine - Volume II become secondary oocytes. -
Development of the Female Reproductive System
Development of the female Reproductive System Dr. Susheela Rani Genital System •Gonads •Internal genitals •External genitals Determining sex – chronology of events •Determined Genetic sex at fertilization Gonadal sex •6th week Phenotypic sex •Differentiation of Behavioural Psyche - Preoptic and Median region Sex of Hypothalamus Genetic Sex Genetic sex of an embryo is determined at the time of fertilization, depending on whether the spermatocyte carries an X or a Y chromosome. The ‘Master’ Gene that determines Gender • SRY (Sex determining Region Y gene) • Has a testis-determining effect on the indifferent gonads. • Small gene (a single exon) • Localized on the shorter arm of the Y chromosome (Yp) • Gets expressed in the gonadal cells • Controls a whole number of further genes on the autosomes as well as on the X chromosome. • Causes development of Testes • Pseudo autosomal regions PAR1 and PAR 2 – Yellow • Heterochromatin – redundant DNA sequences – Pink • SRY – Region for Sex Determining Gene- Dark red • ZFY , Y linked Zinc Finger Protein – Orange • Spermatogenesis Genes in long arm – Azoospermia factor AZF • Telomeres – green • Centromeres - Blue It is not the number of gonosomes that is decisive for the gender, but rather the presence or absence of the Y-chromosome Aneuploidy and Euploidy of Gonosomes Karyotype Phenotypic Gonad Syndrome Fate Gender 45, XO Female Ovaries Turner’s Atrophy of Ovaries in the fetus 45, YO ------ ----- ----- Absence of X chromosome is lethal 46, XX Female Ovaries Normal Normal Development Woman 47, XXX Female -
Homeobox Gene Expression Profile in Human Hematopoietic Multipotent
Leukemia (2003) 17, 1157–1163 & 2003 Nature Publishing Group All rights reserved 0887-6924/03 $25.00 www.nature.com/leu Homeobox gene expression profile in human hematopoietic multipotent stem cells and T-cell progenitors: implications for human T-cell development T Taghon1, K Thys1, M De Smedt1, F Weerkamp2, FJT Staal2, J Plum1 and G Leclercq1 1Department of Clinical Chemistry, Microbiology and Immunology, Ghent University Hospital, Ghent, Belgium; and 2Department of Immunology, Erasmus Medical Center, Rotterdam, The Netherlands Class I homeobox (HOX) genes comprise a large family of implicated in this transformation proces.14 The HOX-C locus transcription factors that have been implicated in normal and has been primarily implicated in lymphomas.15 malignant hematopoiesis. However, data on their expression or function during T-cell development is limited. Using degener- Hematopoietic cells are derived from stem cells that reside in ated RT-PCR and Affymetrix microarray analysis, we analyzed fetal liver (FL) in the embryo and in the adult bone marrow the expression pattern of this gene family in human multipotent (ABM), which have the unique ability to self-renew and thereby stem cells from fetal liver (FL) and adult bone marrow (ABM), provide a life-long supply of blood cells. T lymphocytes are a and in T-cell progenitors from child thymus. We show that FL specific type of hematopoietic cells that play a major role in the and ABM stem cells are similar in terms of HOX gene immune system. They develop through a well-defined order of expression, but significant differences were observed between differentiation steps in the thymus.16 Several transcription these two cell types and child thymocytes. -
The Phylogeny of Squamate Reptiles (Lizards, Snakes, and Amphisbaenians) Inferred from Nine Nuclear Protein-Coding Genes
C. R. Biologies 328 (2005) 1000–1008 http://france.elsevier.com/direct/CRASS3/ Evolution / Évolution The phylogeny of squamate reptiles (lizards, snakes, and amphisbaenians) inferred from nine nuclear protein-coding genes Nicolas Vidal a,b,∗, S. Blair Hedges a a Department of Biology and Astrobiology Research Center, 208 Mueller Lab., Pennsylvania State University, University Park, PA 16802-5301, USA b UMS 602, Taxonomie et collections, Reptiles–Amphibiens, département « Systématique et Évolution », Muséum national d’histoire naturelle, 25, rue Cuvier, Paris 75005, France Received 14 September 2005; accepted 3 October 2005 Available online 27 October 2005 Presented by Pierre Buser Abstract Squamate reptiles number approximately 8000 living species and are a major component of the world’s terrestrial vertebrate diversity. However, the established relationships of the higher-level groups have been questioned in recent molecular analyses. Here we expand the molecular data to include DNA sequences, totaling 6192 base pairs (bp), from nine nuclear protein-coding genes (C-mos, RAG1, RAG2, R35, HOXA13, JUN, α-enolase, amelogenin and MAFB) for 19 taxa representing all major lineages. Our phylogenetic analyses yield a largely resolved phylogeny that challenges previous morphological analyses and requires a new classification. The limbless dibamids are the most basal squamates. Of the remaining taxa (Bifurcata), the gekkonids form a basal lineage. The Unidentata, squamates that are neither dibamids nor gekkonids, are divided into the Scinciformata (scincids, xantusiids, and cordylids) and the Episquamata (remaining taxa). Episquamata includes Laterata (Teiformata, Lacertiformata, and Amphisbaenia, with the latter two joined in Lacertibaenia) and Toxicofera (iguanians, anguimorphs and snakes). Our results reject several previous hypotheses that identified either the varanids, or a burrowing lineage such as amphisbaenians or dibamids, as the closest relative of snakes. -
Catenin Signaling Regulate External Genitalia Formation As an Appendic
RESEARCH ARTICLE 3969 Development 136, 3969-3978 (2009) doi:10.1242/dev.039438 Dosage-dependent hedgehog signals integrated with Wnt/-catenin signaling regulate external genitalia formation as an appendicular program Shinichi Miyagawa1,2, Anne Moon3,*, Ryuma Haraguchi2,*, Chie Inoue4, Masayo Harada1, Chiaki Nakahara4, Kentaro Suzuki1, Daisuke Matsumaru4, Takehito Kaneko2, Isao Matsuo5, Lei Yang6, Makoto M. Taketo7, Taisen Iguchi8, Sylvia M. Evans9 and Gen Yamada1,4,† Embryonic appendicular structures, such as the limb buds and the developing external genitalia, are suitable models with which to analyze the reciprocal interactions of growth factors in the regulation of outgrowth. Although several studies have evaluated the individual functions of different growth factors in appendicular growth, the coordinated function and integration of input from multiple signaling cascades is poorly understood. We demonstrate that a novel signaling cascade governs formation of the embryonic external genitalia [genital tubercle (GT)]. We show that the dosage of Shh signal is tightly associated with subsequent levels of Wnt/-catenin activity and the extent of external genitalia outgrowth. In Shh-null mouse embryos, both expression of Wnt ligands and Wnt/-catenin signaling activity are downregulated. -catenin gain-of-function mutation rescues defective GT outgrowth and Fgf8 expression in Shh-null embryos. These data indicate that Wnt/-catenin signaling in the distal urethral epithelium acts downstream of Shh signaling during GT outgrowth. The current data also suggest that Wnt/-catenin regulates Fgf8 expression via Lef/Tcf binding sites in a 3Ј conserved enhancer. Fgf8 induces phosphorylation of Erk1/2 and cell proliferation in the GT mesenchyme in vitro, yet Fgf4/8 compound-mutant phenotypes indicate dispensable functions of Fgf4/8 and the possibility of redundancy among multiple Fgfs in GT development. -
Functional Genomics Atlas of Synovial Fibroblasts Defining Rheumatoid Arthritis
medRxiv preprint doi: https://doi.org/10.1101/2020.12.16.20248230; this version posted December 18, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission. Functional genomics atlas of synovial fibroblasts defining rheumatoid arthritis heritability Xiangyu Ge1*, Mojca Frank-Bertoncelj2*, Kerstin Klein2, Amanda Mcgovern1, Tadeja Kuret2,3, Miranda Houtman2, Blaž Burja2,3, Raphael Micheroli2, Miriam Marks4, Andrew Filer5,6, Christopher D. Buckley5,6,7, Gisela Orozco1, Oliver Distler2, Andrew P Morris1, Paul Martin1, Stephen Eyre1* & Caroline Ospelt2*,# 1Versus Arthritis Centre for Genetics and Genomics, School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, UK 2Department of Rheumatology, Center of Experimental Rheumatology, University Hospital Zurich, University of Zurich, Zurich, Switzerland 3Department of Rheumatology, University Medical Centre, Ljubljana, Slovenia 4Schulthess Klinik, Zurich, Switzerland 5Institute of Inflammation and Ageing, University of Birmingham, Birmingham, UK 6NIHR Birmingham Biomedical Research Centre, University Hospitals Birmingham NHS Foundation Trust, University of Birmingham, Birmingham, UK 7Kennedy Institute of Rheumatology, University of Oxford Roosevelt Drive Headington Oxford UK *These authors contributed equally #corresponding author: [email protected] NOTE: This preprint reports new research that has not been certified by peer review and should not be used to guide clinical practice. 1 medRxiv preprint doi: https://doi.org/10.1101/2020.12.16.20248230; this version posted December 18, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. -
Avian Reproductive System—Male
eXtension Avian Reproductive System—Male articles.extension.org/pages/65373/avian-reproductive-systemmale Written by: Dr. Jacquie Jacob, University of Kentucky An understanding of the male avian reproductive system is useful for anyone who breeds chickens or other poultry. One remarkable aspect of the male avian reproductive system is that the sperm remain viable at body temperature. Consequently, the avian male reproductive tract is entirely inside the body, as shown in Figure 1. In this way, the reproductive system of male birds differs from that of male mammals. The reproductive tract in male mammals is outside the body because mammalian sperm does not remain viable at body temperature. Fig. 1. Location of the male reproductive system in a chicken. Source: Jacquie Jacob, University of Kentucky. Parts of the Male Chicken Reproductive System In the male chicken, as with other birds, the testes produce sperm, and then the sperm travel through a vas deferens to the cloaca. Figure 2 shows the main components of the reproductive tract of a male chicken. Fig. 2. Reproductive tract of a male chicken. Source: Jacquie Jacob, University of Kentucky. The male chicken has two testes, located along the chicken's back, near the top of the kidneys. The testes are elliptical and light yellow. Both gonads (testes) are developed in a male chicken, whereas a female chicken has only one mature gonad (ovary). Another difference between the sexes involves sperm production versus egg production. A rooster continues to produce new sperm while it is sexually mature. A female chicken, on the other hand, hatches with the total number of ova it will ever have; that is, no new ova are produced after a female chick hatches. -
Reptilian Renal Structure and Function
REPTILIAN RENAL STRUCTURE AND FUNCTION Jeanette Wyneken, PhD Florida Atlantic University, Dept. of Biological Sciences, 777 Glades Rd, Boca Raton, FL 33431 USA ABSTRACT This overview focuses on the urinary component of the urogenital system. Here I define terms, synthesize the relevant literature on reptilian renal structure, discuss structural – functional relationships, and provide comparisons to other vertebrate renal form and function. The urinary and reproductive components of the urogenital system develop in conjunction with one another from two adjacent parts of the mesoderm. As development proceeds, ducts that drain nitrogenous wastes in the embryo are co-opted by the reproductive system or they regress (e.g., mesonephric ducts become the Müllarian ducts in females, pronephric ducts become the Ductus deferens in males) and new ducts (ureters) form to drain the kidneys. Urogenital System Consists of Kidneys, Gonads and Duct Systems • Urinary system is formed by the kidneys, including their nephrons (= nephric tubules) and collecting ducts. The collecting ducts drain products from the nephrons into to ureters that themselves drain to the cloaca via the (usually paired) urogenital papillae in the dorsolateral cloacal wall. A urinary bladder that opens in the floor of the cloaca may or may not be present depending upon species. • The genital system (gonads and their ducts) forms later in development and is discussed here only when relevant to urinary function. Kidney Form and Terminology The literature includes a number of descriptive terms for the developing kidney that often confuse more than clarify the form of the kidney. Understanding the basics of kidney development should help. The kidneys arise as paired structures from embryonic mesoderm.