Resolving Species Boundaries in the Atlanta Brunnea Species
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Atlanta Ariejansseni, a New Species of Shelled Heteropod from the Southern Subtropical Convergence Zone (Gastropoda, Pterotracheoidea)
A peer-reviewed open-access journal ZooKeys 604: 13–30 (2016) Atlanta ariejansseni, a new species of shelled heteropod.... 13 doi: 10.3897/zookeys.604.8976 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Atlanta ariejansseni, a new species of shelled heteropod from the Southern Subtropical Convergence Zone (Gastropoda, Pterotracheoidea) Deborah Wall-Palmer1,2, Alice K. Burridge2,3, Katja T.C.A. Peijnenburg2,3 1 School of Geography, Earth and Environmental Sciences, Plymouth University, Drake Circus, Plymouth, PL4 8AA, UK 2 Naturalis Biodiversity Center, Darwinweg 2, 2333 CR Leiden, The Netherlands3 Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, P. O. Box 94248, 1090 GE Amster- dam, The Netherlands Corresponding author: Deborah Wall-Palmer ([email protected]) Academic editor: N. Yonow | Received 21 April 2016 | Accepted 22 June 2016 | Published 11 July 2016 http://zoobank.org/09E534C5-589D-409E-836B-CF64A069939D Citation: Wall-Palmer D, Burridge AK, Peijnenburg KTCA (2016) Atlanta ariejansseni, a new species of shelled heteropod from the Southern Subtropical Convergence Zone (Gastropoda, Pterotracheoidea). ZooKeys 604: 13–30. doi: 10.3897/zookeys.604.8976 Abstract The Atlantidae (shelled heteropods) is a family of microscopic aragonite shelled holoplanktonic gastro- pods with a wide biogeographical distribution in tropical, sub-tropical and temperate waters. The arago- nite shell and surface ocean habitat of the atlantids makes them particularly susceptible to ocean acidifica- tion and ocean warming, and atlantids are likely to be useful indicators of these changes. However, we still lack fundamental information on their taxonomy and biogeography, which is essential for monitoring the effects of a changing ocean. -
Evidence for the Validity of Protatlanta Sculpta (Gastropoda: Pterotracheoidea)
Contributions to Zoology, 85 (4) 423-435 (2016) Evidence for the validity of Protatlanta sculpta (Gastropoda: Pterotracheoidea) Deborah Wall-Palmer1, 2, 6, Alice K. Burridge2, 3, Katja T.C.A. Peijnenburg2, 3, Arie Janssen2, Erica Goetze4, Richard Kirby5, Malcolm B. Hart1, Christopher W. Smart1 1 School of Geography, Earth and Environmental Sciences, Plymouth University, Drake Circus, Plymouth, PL4 8AA, United Kingdom 2 Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, the Netherlands 3 Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, P.O. Box 94248, 1090 GE Amsterdam, the Netherlands 4 Department of Oceanography, University of Hawai‘i at Mānoa, 1000 Pope Road, Honolulu, HI 96822, USA 5 Marine Biological Association, Citadel Hill, Plymouth, PL1 2PB, United Kingdom 6 E-mail: [email protected] Key words: Atlantic Ocean, biogeography, DNA barcoding, morphometrics, Protatlanta, shelled heteropod Abstract Introduction The genus Protatlanta is thought to be monotypic and is part of The genus Protatlanta Tesch, 1908 is one of three the Atlantidae, a family of shelled heteropods. These micro- shelled heteropod genera within the family Atlantidae. scopic planktonic gastropods are poorly known, although re- search on their ecology is now increasing in response to con- All members of the Atlantidae are microscopic (<12 cerns about the effects of ocean acidification on calcareous mm), holoplanktonic gastropods that have a foot mod- plankton. A correctly implemented taxonomy of the Atlantidae ified for swimming, a long proboscis, large, complex is fundamental to this progressing field of research and it re- eyes and flattened shells with keels. Defining charac- quires much attention, particularly using integrated molecular teristics of the three genera within the Atlantidae are and morphological techniques. -
The Malacological Society of London
ACKNOWLEDGMENTS This meeting was made possible due to generous contributions from the following individuals and organizations: Unitas Malacologica The program committee: The American Malacological Society Lynn Bonomo, Samantha Donohoo, The Western Society of Malacologists Kelly Larkin, Emily Otstott, Lisa Paggeot David and Dixie Lindberg California Academy of Sciences Andrew Jepsen, Nick Colin The Company of Biologists. Robert Sussman, Allan Tina The American Genetics Association. Meg Burke, Katherine Piatek The Malacological Society of London The organizing committee: Pat Krug, David Lindberg, Julia Sigwart and Ellen Strong THE MALACOLOGICAL SOCIETY OF LONDON 1 SCHEDULE SUNDAY 11 AUGUST, 2019 (Asilomar Conference Center, Pacific Grove, CA) 2:00-6:00 pm Registration - Merrill Hall 10:30 am-12:00 pm Unitas Malacologica Council Meeting - Merrill Hall 1:30-3:30 pm Western Society of Malacologists Council Meeting Merrill Hall 3:30-5:30 American Malacological Society Council Meeting Merrill Hall MONDAY 12 AUGUST, 2019 (Asilomar Conference Center, Pacific Grove, CA) 7:30-8:30 am Breakfast - Crocker Dining Hall 8:30-11:30 Registration - Merrill Hall 8:30 am Welcome and Opening Session –Terry Gosliner - Merrill Hall Plenary Session: The Future of Molluscan Research - Merrill Hall 9:00 am - Genomics and the Future of Tropical Marine Ecosystems - Mónica Medina, Pennsylvania State University 9:45 am - Our New Understanding of Dead-shell Assemblages: A Powerful Tool for Deciphering Human Impacts - Sue Kidwell, University of Chicago 2 10:30-10:45 -
Notes on the Systematics, Morphology and Biostratigraphy of Fossil Holoplanktonic Mollusca, 22 1
B76-Janssen-Grebnev:Basteria-2010 11/07/2012 19:23 Page 15 Notes on the systematics, morphology and biostratigraphy of fossil holoplanktonic Mollusca, 22 1. Further pelagic gastropods from Viti Levu, Fiji Archipelago Arie W. Janssen Netherlands Centre for Biodiversity Naturalis (Palaeontology Department), P.O. Box 9517, NL-2300 RA Leiden, The Netherlands; currently: 12, Triq tal’Hamrija, Xewkija XWK 9033, Gozo, Malta; [email protected] Andrew Grebneff † Formerly : University of Otago, Geology Department, Dunedin, New Zealand himself during holiday trips in 1995 and 1996, also from Viti Two localities in the island of Viti Levu, Fiji Archipelago, Levu, the largest island in the Fiji archipelago. Following an yielded together 28 species of Heteropoda (3 species) and initial evaluation of this material it remained unstudied, 15 Pteropoda (25 species). Two samples from Tabataba, NW however, for a long time . A first inspection acknowledged Viti Levu, indicate an age of late Miocene to early Pliocene. Andrew’s impression that part of the samples was younger Two samples from Waila, SE Viti Levu, signify an age of than the earlier described material and therefore worth Pliocene (Piacenzian) and closely resemble coeval assem - publishing. blages described from Pangasinan, Philippines. After the untimely death of Andrew Grebneff in July 2010 (see the website of the University of Otago, New Key words: Gastropoda, Pterotracheoidea, Limacinoidea, Zealand (http://www.otago.ac.nz/geology/news/files/ Cavolinioidea, Clionoidea, late Miocene, Pliocene, biostratigraphy, andrew_ grebneff.html) it was decided to restart the study Fiji archipelago. of those samples and publish the results with Andrew’s name added as a valuable co-author, as he not only collected the specimens but also participated in discussions on their Introduction taxonomy and age. -
The Evolution of Eyes
Annual Reviews www.annualreviews.org/aronline Annu. Reo. Neurosci. 1992. 15:1-29 Copyright © 1992 by Annual Review~ Inc] All rights reserved THE EVOLUTION OF EYES Michael F. Land Neuroscience Interdisciplinary Research Centre, School of Biological Sciences, University of Sussex, Brighton BN19QG, United Kingdom Russell D. Fernald Programs of HumanBiology and Neuroscience and Department of Psychology, Stanford University, Stanford, California 94305 KEYWORDS: vision, optics, retina INTRODUCTION: EVOLUTION AT DIFFERENT LEVELS Since the earth formed more than 5 billion years ago, sunlight has been the most potent selective force to control the evolution of living organisms. Consequencesof this solar selection are most evident in eyes, the premier sensory outposts of the brain. Becauseorganisms use light to see, eyes have evolved into manyshapes, sizes, and designs; within these structures, highly conserved protein molecules for catching photons and bending light rays have also evolved. Although eyes themselves demonstrate manydifferent solutions to the problem of obtaining an image--solutions reached rela- by University of California - Berkeley on 09/02/08. For personal use only. tively late in evolution--some of the molecules important for sight are, in fact, the same as in the earliest times. This suggests that once suitable Annu. Rev. Neurosci. 1992.15:1-29. Downloaded from arjournals.annualreviews.org biochemical solutions are found, they are retained, even though their "packaging"varies greatly. In this review, we concentrate on the diversity of eye types and their optical evolution, but first we consider briefly evolution at the more fundamental levels of molecules and cells. Molecular Evolution The opsins, the protein componentsof the visual pigments responsible for catching photons, have a history that extends well beyond the appearance of anything we would recognize as an eye. -
Abstract Volume
ABSTRACT VOLUME August 11-16, 2019 1 2 Table of Contents Pages Acknowledgements……………………………………………………………………………………………...1 Abstracts Symposia and Contributed talks……………………….……………………………………………3-225 Poster Presentations…………………………………………………………………………………226-291 3 Venom Evolution of West African Cone Snails (Gastropoda: Conidae) Samuel Abalde*1, Manuel J. Tenorio2, Carlos M. L. Afonso3, and Rafael Zardoya1 1Museo Nacional de Ciencias Naturales (MNCN-CSIC), Departamento de Biodiversidad y Biologia Evolutiva 2Universidad de Cadiz, Departamento CMIM y Química Inorgánica – Instituto de Biomoléculas (INBIO) 3Universidade do Algarve, Centre of Marine Sciences (CCMAR) Cone snails form one of the most diverse families of marine animals, including more than 900 species classified into almost ninety different (sub)genera. Conids are well known for being active predators on worms, fishes, and even other snails. Cones are venomous gastropods, meaning that they use a sophisticated cocktail of hundreds of toxins, named conotoxins, to subdue their prey. Although this venom has been studied for decades, most of the effort has been focused on Indo-Pacific species. Thus far, Atlantic species have received little attention despite recent radiations have led to a hotspot of diversity in West Africa, with high levels of endemic species. In fact, the Atlantic Chelyconus ermineus is thought to represent an adaptation to piscivory independent from the Indo-Pacific species and is, therefore, key to understanding the basis of this diet specialization. We studied the transcriptomes of the venom gland of three individuals of C. ermineus. The venom repertoire of this species included more than 300 conotoxin precursors, which could be ascribed to 33 known and 22 new (unassigned) protein superfamilies, respectively. Most abundant superfamilies were T, W, O1, M, O2, and Z, accounting for 57% of all detected diversity. -
Comparative Analysis of Chromosome Counts Infers Three Paleopolyploidies in the Mollusca
GBE Comparative Analysis of Chromosome Counts Infers Three Paleopolyploidies in the Mollusca Nathaniel M. Hallinan* and David R. Lindberg Department of Integrative Biology, University of California Berkeley *Corresponding author: E-mail: [email protected]. Accepted: 8 August 2011 Abstract The study of paleopolyploidies requires the comparison of multiple whole genome sequences. If the branches of a phylogeny on which a whole-genome duplication (WGD) occurred could be identified before genome sequencing, taxa could be selected that provided a better assessment of that genome duplication. Here, we describe a likelihood model in which the number of chromosomes in a genome evolves according to a Markov process with one rate of chromosome duplication and loss that is proportional to the number of chromosomes in the genome and another stochastic rate at which every chromosome in the genome could duplicate in a single event. We compare the maximum likelihoods of a model in which the genome duplication rate varies to one in which it is fixed at zero using the Akaike information criterion, to determine if a model with WGDs is a good fit for the data. Once it has been determined that the data does fit the WGD model, we infer the phylogenetic position of paleopolyploidies by calculating the posterior probability that a WGD occurred on each branch of the taxon tree. Here, we apply this model to a molluscan tree represented by 124 taxa and infer three putative WGD events. In the Gastropoda, we identify a single branch within the Hypsogastropoda and one of two branches at the base of the Stylommatophora. -
The Limpet Form in Gastropods: Evolution, Distribution, and Implications for the Comparative Study of History
UC Davis UC Davis Previously Published Works Title The limpet form in gastropods: Evolution, distribution, and implications for the comparative study of history Permalink https://escholarship.org/uc/item/8p93f8z8 Journal Biological Journal of the Linnean Society, 120(1) ISSN 0024-4066 Author Vermeij, GJ Publication Date 2017 DOI 10.1111/bij.12883 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Biological Journal of the Linnean Society, 2016, , – . With 1 figure. Biological Journal of the Linnean Society, 2017, 120 , 22–37. With 1 figures 2 G. J. VERMEIJ A B The limpet form in gastropods: evolution, distribution, and implications for the comparative study of history GEERAT J. VERMEIJ* Department of Earth and Planetary Science, University of California, Davis, Davis, CA,USA C D Received 19 April 2015; revised 30 June 2016; accepted for publication 30 June 2016 The limpet form – a cap-shaped or slipper-shaped univalved shell – convergently evolved in many gastropod lineages, but questions remain about when, how often, and under which circumstances it originated. Except for some predation-resistant limpets in shallow-water marine environments, limpets are not well adapted to intense competition and predation, leading to the prediction that they originated in refugial habitats where exposure to predators and competitors is low. A survey of fossil and living limpets indicates that the limpet form evolved independently in at least 54 lineages, with particularly frequent origins in early-diverging gastropod clades, as well as in Neritimorpha and Heterobranchia. There are at least 14 origins in freshwater and 10 in the deep sea, E F with known times ranging from the Cambrian to the Neogene. -
Smithsonian Miscellaneous Collections
SMITHSONIAN MISCELLANEOUS COLLECTIOXS. 227 AEEANGEMENT FAMILIES OF MOLLUSKS. PREPARED FOR THE SMITHSONIAN INSTITUTION BY THEODORE GILL, M. D., Ph.D. WASHINGTON: PUBLISHED BY THE SMITHSONIAN INSTITUTION, FEBRUARY, 1871. ^^1 I ADVERTISEMENT. The following list has been prepared by Dr. Theodore Gill, at the request of the Smithsonian Institution, for the purpose of facilitating the arrangement and classification of the Mollusks and Shells of the National Museum ; and as frequent applica- tions for such a list have been received by the Institution, it has been thought advisable to publish it for more extended use. JOSEPH HENRY, Secretary S. I. Smithsonian Institution, Washington, January, 1871 ACCEPTED FOR PUBLICATION, FEBRUARY 28, 1870. (iii ) CONTENTS. VI PAGE Order 17. Monomyaria . 21 " 18. Rudista , 22 Sub-Branch Molluscoidea . 23 Class Tunicata , 23 Order 19. Saccobranchia . 23 " 20. Dactjlobranchia , 24 " 21. Taeniobranchia , 24 " 22. Larvalia , 24 Class Braehiopoda . 25 Order 23. Arthropomata , 25 " . 24. Lyopomata , 26 Class Polyzoa .... 27 Order 25. Phylactolsemata . 27 " 26. Gymnolseraata . 27 " 27. Rhabdopleurse 30 III. List op Authors referred to 31 IV. Index 45 OTRODUCTIO^. OBJECTS. The want of a complete and consistent list of the principal subdivisions of the mollusks having been experienced for some time, and such a list being at length imperatively needed for the arrangement of the collections of the Smithsonian Institution, the present arrangement has been compiled for that purpose. It must be considered simply as a provisional list, embracing the results of the most recent and approved researches into the systematic relations and anatomy of those animals, but from which innova- tions and peculiar views, affecting materially the classification, have been excluded. -
Midwater Data Sheet
MIDWATER TRAWL DATA SHEET RESEARCH VESSEL__________________________________(1/20/2013Version*) CLASS__________________;DATE_____________;NAME:_________________________; DEVICE DETAILS___________ LOCATION (OVERBOARD): LAT_______________________; LONG___________________________ LOCATION (AT DEPTH): LAT_______________________; LONG______________________________ LOCATION (START UP): LAT_______________________; LONG______________________________ LOCATION (ONBOARD): LAT_______________________; LONG______________________________ BOTTOM DEPTH_________; DEPTH OF SAMPLE:____________; DURATION OF TRAWL___________; TIME: IN_________AT DEPTH________START UP__________SURFACE_________ SHIP SPEED__________; WEATHER__________________; SEA STATE_________________; AIR TEMP______________ SURFACE TEMP__________; PHYS. OCE. NOTES______________________; NOTES_____________________________ INVERTEBRATES Lensia hostile_______________________ PHYLUM RADIOLARIA Lensia havock______________________ Family Tuscaroridae “Round yellow ones”___ Family Hippopodiidae Vogtia sp.___________________________ PHYLUM CTENOPHORA Family Prayidae Subfamily Nectopyramidinae Class Nuda "Pointed siphonophores"________________ Order Beroida Nectadamas sp._______________________ Family Beroidae Nectopyramis sp.______________________ Beroe abyssicola_____________________ Family Prayidae Beroe forskalii________________________ Subfamily Prayinae Beroe cucumis _______________________ Craseoa lathetica_____________________ Class Tentaculata Desmophyes annectens_________________ Subclass -
Biogeography and Genetic Diversity of the Atlantid Heteropods T ⁎ Deborah Wall-Palmera,B, , Alice K
Progress in Oceanography 160 (2018) 1–25 Contents lists available at ScienceDirect Progress in Oceanography journal homepage: www.elsevier.com/locate/pocean SCCWRP #1038 Biogeography and genetic diversity of the atlantid heteropods T ⁎ Deborah Wall-Palmera,b, , Alice K. Burridgeb,c, Erica Goetzed, Frank R. Stokvisb, Arie W. Janssenb, Lisette Mekkesb,c, María Moreno-Alcántarae, Nina Bednaršekf, Tom Schiøtteg, Martin Vinther Sørenseng, Christopher W. Smarta, Katja T.C.A. Peijnenburgb,c a School of Geography, Earth and Environmental Sciences, University of Plymouth, Plymouth PL4 8AA, UK b Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands c Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, 1090 GE Amsterdam, The Netherlands d Department of Oceanography, University of Hawai‘iatMānoa, Honolulu, HI 96822, USA e Departamento de Plancton y Ecología Marina, Instituto Politécnico Nacional, Centro Interdisciplinario de Ciencias Marinas, La Paz C.P. 23096, Mexico f Southern California Coastal Waters Research Project, Harbor Blvd #110, Costa Mesa, CA 92626, USA g The Natural History Museum of Denmark, University of Copenhagen, 2100 Copenhagen, Denmark ARTICLE INFO ABSTRACT Keywords: The atlantid heteropods are regularly encountered, but rarely studied marine planktonic gastropods. Relying Atlantidae on a small (< 14 mm), delicate aragonite shell and living in the upper ocean means that, in common with Atlanta pteropods, atlantids are likely to be affected by imminent ocean changes. Variable shell morphology and Cytochrome c oxidase subunit 1 (mtCO1) widespread distributions indicate that the family is more diverse than the 23 currently known species. DNA barcoding Uncovering this diversity is fundamental to determining the distribution of atlantids and to understanding Planktonic gastropods their environmental tolerances. -
Title SHELLS of ATLANTIDAE (HETEROPODA
CORE Metadata, citation and similar papers at core.ac.uk Provided by Kyoto University Research Information Repository SHELLS OF ATLANTIDAE (HETEROPODA) COLLECTED Title BY THE SOYO-MARU IN THE SOUTHERN WATERS OF JAPAN Author(s) Tokioka, Takasi PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1955), 4(2-3): 237-250 Issue Date 1955-05-30 URL http://hdl.handle.net/2433/174524 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University SHELLS OF ATLANTIDAE (HETEROPODA) COLLECTED BY THE SOYO-MARU IN THE SOUTHERN WATERS OF JAPAN') T AKASI TOKIOKA Seto Marine Biological Laboratory, Sirahama With Plates XVII-XVIII and 10 Text-figures Far ago, I had an opportunity of examining a number of plankton samples collected by the S6y6-Maru chiefly in the southern waters of Japan including Bays of Sagami and Suruga and a part of the eastern waters in the years 1934 and 1937- 1939. I selected at that time shells of Atlantidae out of the material and prepared abundant figures and data about their occurrence. Here, these figures and data are arranged for publication. At first, the following six species are easily discriminated: Oxygyrus keraudreni Atlanta lesueuri Atlanta peroni Atlanta fusca Atlanta inclinata Atlanta turriculata 1. Oxygyrus keraudreni (LESUEUR), 1817 (Figs. 1-2) Oxygyrus keraudreni-SMITH (1888) : p. 6. VAYSSIERE (1904) : p. 56, Pl. V figs. 71-75. TESCH (1949): p. 10; Figs. 1-3, 44. Oxygyrus keraudreni+ Oxygyrus rangi-TESCH (1908) : pp. 5 and 6. Oxygyrus rangi-TESCH (1906): p. 49; Pl. VII figs. 2-4, 6B. Long Aperture Height of Whorl Number of width: diameter formula whorls keel hei!;l'ht 1.5mm 640 ,u 1.5 1:0.25:- 2 1: 1.3 690 1.7 1:0.24:- 2 1: 1.3 740 1) Contributions from the Seto Marine Biological Laboratory, No.