Studies on the Generation and Use of Functionalised Organozinc Carbenoids for the Synthesis of Aminocyclopropanes and Related Congeners
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STUDIES ON THE GENERATION AND USE OF FUNCTIONALISED ORGANOZINC CARBENOIDS FOR THE SYNTHESIS OF AMINOCYCLOPROPANES AND RELATED CONGENERS A Thesis Presented by Guillaume Begis In Partial Fulfilment of the Requirements for the Award of the Degree of DOCTOR OF PHILOSOPHY OF THE UNIVERSITY OF LONDON Christopher Ingold Laboratories Department of Chemistry University of London London W C1H0AJ September 2004 UMI Number: U602451 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. Dissertation Publishing UMI U602451 Published by ProQuest LLC 2014. Copyright in the Dissertation held by the Author. Microform Edition © ProQuest LLC. All rights reserved. This work is protected against unauthorized copying under Title 17, United States Code. ProQuest LLC 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106-1346 Abstract ABSTRACT The present thesis describes a range of studies on the generation and reactivity of organozinc carbenoid species possessing adjacent nitrogen functionality for the preparation of aminocyclopropanes and related congeners. This thesis opens with two distinct introductory reviews. The first one focuses on the description of the different general methods already available for the synthesis of aminocyclopropanes. The second one is concerned with the generation and reactivity of organozinc carbenoids encountered in the literature. The results and discussion chapter firstly describes the successful generation of an organozinc carbenoid from an acetal moiety contiguous to a nitrogen atom of a simple cyclic amide using a mixture of zinc amalgam and chlorotrimethylsilane. This new organometallic species is found to undergo cyclopropanation reactions with a range of alkenes to yield amidocyclopropanes. Subsequent studies directed towards the design of carbenoid precursors which can lead to the preparation of primary aminocyclopropanes are then discussed. A method for the synthesis of chiral protected aminocyclopropanes in two steps from their corresponding alkenes is described. An investigation of the preparation of TV-substituted cyclopropyl amino alcohols and acids is presented. From this study, an TV-substituted cyclopropyl glycine derivative is prepared. Finally, this thesis discusses the attempted palladium-catalysed cross-coupling reactions between amino cyclopropylsilanes and aryl iodides and the successful Tamao-Fleming oxidation of the carbon-silicon bond of vicinal amino cyclopropylsilanols to give the corresponding amino cyclopropanols. The thesis terminates with a full description of the experimental procedures used and the compounds prepared. 2 Declaration DECLARATION The research described in this thesis is, to the best of my knowledge, original except where due reference is made to other authors. 3 Contents CONTENTS Abstract 2 Declaration 3 Contents 4 Acknowledgements 7 Abbreviations 8 Stereochemical notation 11 Chapter 1 Introduction 12 1 Introduction 13 1.1 Synthesis of cyclopropylamines 13 1.1.1 By cyclopropyl migration via a Hofmann or Curtius rearrangement 14 1.1.2 By cyclopropanation of enamines and enamides 16 1.1.3 By titanium-mediated cyclopropanation of carboxamides and nitriles 18 1.1.4 Reactions involving 1,3-ring-closure 21 1.1.5 By reaction with a “cyclopropanone equivalent” 22 1.1.6 Via palladium-catalysed C-N bond formation 24 1.1.7 By reduction of nitrocyclopropanes 24 1.1.8 By addition of aminocarbenes or carbenoids to alkenes 25 1.1.9 Summary 26 1.2 Organozinc carbenoids 27 1.2.1 Carbenes and carbenoids 27 1.2.2 Organozinc carbenoid chemistry 28 1.2.2.1 From gem-dihalo compounds 28 1.2.2.1.1 Background 28 1.2.2.1.2 The “cyclopropanating agent” 31 1.2.2.1.3 Theoretical studies on cyclopropanation reactions 32 1.2.2.1.4 Evolution of the “cyclopropanating agent” 34 1.2.2.2 From diazoalkanes and zinc salts 37 1.2.2.3 From carbonyl compounds 38 1.2.2.3.1 The Clemmensen reduction of carbonyl compounds 3 8 4 Contents 1.2.2.3.2 The controlled generation of organozinc carbenoids from carbonyl compounds 42 1.2.2.3.3 Evolution of organozinc carbenoid chemistry within our group 45 1.3 Summary and perspectives 52 Chapter 2 Results and Discussion 53 2 Introduction 54 2.1 Background - The attempted aminocyclopropanation reaction using dimethylformamide dimethyl acetal 54 2.2 Preliminary study on the amidocyclopropanation reaction using A-diethoxymethyl-2-pyrrolidinone as the carbenoid precursor 55 2.3 Methods used to determine the stereoselectivity of the cyclopropanation reaction 57 2.4 Further study on the amidocyclopropanation of allylbenzene using JV-diethoxymethyl-2-pyrrolidinone as the carbenoid precursor 58 2.5 Scope and limitation of this novel amidocyclopropanation reaction 59 2.5.1 Cyclopropanation of unfunctionalised alkenes 59 2.5.2 Cyclopropanation of functionalised alkenes 61 2.5.2.1 Cyclopropanation of electron rich double bonds 61 2.5.2.2 Cyclopropanation of electron deficient double bonds 63 2.6 Extension of this novel amidocyclopropanation reaction 64 2.6.1 Study of the amidocyclopropanation reaction using JV-benzyl- -A-diethoxymethylacetamide as the carbenoid precursor 64 2.6.2 Study of the amidocyclopropanation reaction using TV-formyl amides as the carbenoid precursor 65 2.7 Studies toward the preparation of primary aminocyclopropanes 66 2.7.1 Study of the cyclopropanation reaction using vV-diethoxymethyl phthalimide as the carbenoid precursor 66 2.7.2 Study of the preparation of primary aminocyclopropanes using 7/-diethoxymethyl-2,3-dihydroisoindol-1 -one as the carbenoid precursor 68 2.7.3 Preliminary study of the use of A-diethoxymethyl oxazolidinones as carbenoid precursors 69 2.7.4 A proposed mechanism to account for the stereochemistry observed 73 5 Contents 2.7.5 Scope of the cyclopropanation reaction using (±)-iV-diethoxymethyl- -4,5-diphenyloxazolidinone 74 2.7.6 Synthesis of chiral cyclopropane derivatives 76 2.7.7 Deprotection of 4,5-diphenyloxazolidinone cyclopropanes 77 2.7.8 Studies towards the preparation of primary arylcyclopropylamines 81 2.7.8.1 Use of a different carbenoid precursor 81 2.7.8.2 Studies of alternative methods for the cleavage of the diphenyloxazolidinone ring 82 2.8 Studies on the synthesis of ^/-substituted cyclopropyl amino alcohols and acids 85 2.9 Studies on the synthesis of arylcyclopropanes via a palladium-catalysed cross-coupling reaction 90 2.9.1 Palladium-catalysed cross-coupling reactions involving cyclopropyl halides 91 2.9.2 Palladium-catalysed cross-coupling reactions involving cyclopropyl organometallic species 92 2.9.3 Palladium-catalysed cross-coupling reactions of organosilicon compounds 93 2.9.3.1 Background 93 2.9.3.2 A preliminary study towards the palladium-catalysed cross coupling reactions of cyclopropylsilanes 95 2.10 Preparation of vicinal amino cyclopropanols 98 2.10.1 Background 98 2.10.2 The use of the Tamao-Fleming oxidation of cyclopropylsilanes leading to the preparation of vicinal amino cyclopropanols 99 Chapter 3 Conclusions and perspectives 102 Chapter 4 Experimental 108 4 General experimental 109 4.1 Experimental Procedures 111 Chapter 5 References 209 Chapter 6 Appendix 219 6 Acknowledgements ACKNOWLEDGEMENTS I would firstly like to thank my supervisor, Professor Willie Motherwell, for his guidance, help and encouragements over the past three years. I am also very grateful to my industrial supervisor at AstraZeneca, Doctor David Cladingboel, for his advice, enthusiasm and having arranged my very enjoyable three-month industrial placement in Loughborough. I would like also to thank various members of the “WBM family”, firstly the ‘Maman’ of the group, Robyn, for her help in the lab and also for her kindness to proofread a part of this manuscript (and for having informed me that the use of “promiscuity” is not proper when one would like to refer to “proximity” of two atoms), Rob and Ela for all the very good time spent inside and outside of the lab, Steve of being always ready to ‘give a hand’, Tom for being the only one always interested in talking about organozinc carbenoids and having proofread the Introduction of this manuscript, Alex for his enthusiasm in the lab and (particularly) in the pub, Lynda, Beatrice, Camilla and Oliver for helping me to settle in my first year. I am also very grateful to all the ‘technical’ staff at UCL Chemistry Department, especially to Dr. Abil Aliev for NMR and John Hill and his colleagues for mass spectra. I would like to thank all the people from the AstraZeneca site of Loughborough who have contributed to make my stay a very interesting and pleasant experience. I also wish to express my gratitude to AstraZeneca for its financial support. A special thank to Dr. Yvain Roue for all his time spent on my initiation to practical organic chemistry. Most of all I would like to thank my parents, Dominique and Marie-Christine, for their constant support and help, and Mina-chan for her encouragements during my PhD, having left her so loved Japan to join me in Europe and all the happiness that she is bringing to me. 7 Abbreviations ABBREVIATIONS Ac acetyl All allyl Ar unspecified aryl group arom aromatic BINAP 2,2’-bis(diphenylphosphino)-l,r-binaphthyl Boc fer/-butoxycarbonyl Bu butyl Bn benzyl br broad c cyclo cat. catalytic Cl chemical ionisation A reflux dba dibenzylideneacetone DCE dichloroethane DMF V^V-dimethylformamide