Phase-Transferable Force Field for Alkali Halides
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Rise of the Molecular Machines Euan R
Angewandte. Essays International Edition: DOI: 10.1002/anie.201503375 Supramolecular Systems German Edition: DOI: 10.1002/ange.201503375 Rise of the Molecular Machines Euan R. Kay* and David A. Leigh* molecular devices · molecular machines · molecular motors · molecular nanotechnology Introduction inspirational in general terms, it is doubtful whether either of these manifestos had much practical influence on the devel- “When we get to the very, very small world … we have a lot of opment of artificial molecular machines.[5] Feynmans talk new things that would happen that represent completely new came at a time before chemists had the synthetic methods and opportunities for design … At the atomic level we have new kinds analytical tools available to be able to consider how to make of forces and new kinds of possibilities, new kinds of effects. The molecular machines; Drexlers somewhat nonchemical view problem of manufacture and reproduction of materials will be of atomic construction is not shared by the majority of quite different … inspired by biological phenomena in which experimentalists working in this area. In fact, “mechanical” chemical forces are used in a repetitious fashion to produce all movement within molecules has been part of chemistry since kinds of weird effects (one of which is the author) …” conformational analysis became established in the 1950s.[6] As Richard P. Feynman (1959)[2] well as being central to advancing the structural analysis of complex molecules, this was instrumental in chemists begin- It has long been appreciated that molecular motors and ning to consider dynamics as an intrinsic aspect of molecular machines are central to almost every biological process. -
Halide Metathesis in Overdrive: Mechanochemical Synthesis of a Heterometallic Group 1 Allyl Complex
Halide metathesis in overdrive: mechanochemical synthesis of a heterometallic group 1 allyl complex Ross F. Koby1, Nicholas R. Rightmire1, Nathan D. Schley1, Timothy P. Hanusa*1 and William W. Brennessel2 Full Research Paper Open Access Address: Beilstein J. Org. Chem. 2019, 15, 1856–1863. 1Department of Chemistry, Vanderbilt University, PO Box 1822, doi:10.3762/bjoc.15.181 Nashville, TN 37235, USA and 2X-ray Crystallographic Facility, B51 Hutchison Hall, Department of Chemistry, University of Rochester, Received: 01 March 2019 Rochester, NY 14627, USA Accepted: 18 July 2019 Published: 02 August 2019 Email: Timothy P. Hanusa* - [email protected] This article is part of the thematic issue "Mechanochemistry II". * Corresponding author Guest Editor: J. G. Hernández Keywords: © 2019 Koby et al.; licensee Beilstein-Institut. caesium; entropy; intermolecular forces; mechanochemistry; License and terms: see end of document. metathesis; potassium Abstract As a synthesis technique, halide metathesis (n RM + M'Xn → RnM' + n MX) normally relies for its effectiveness on the favorable formation of a metal halide byproduct (MX), often aided by solubility equilibria in solution. Owing to the lack of significant thermodynamic driving forces, intra-alkali metal exchange is one of the most challenging metathetical exchanges to attempt, espe- cially when conducted without solvent. Nevertheless, grinding together the bulky potassium allyl [KA']∞ (A' = [1,3- – (SiMe3)2C3H3] ) and CsI produces the heterometallic complex [CsKA'2]∞ in low yield, which was crystallographically character- ized as a coordination polymer that displays site disorder of the K+ and Cs+ ions. The entropic benefits of mixed Cs/K metal … … centers, but more importantly, the generation of multiple intermolecular K CH3 and Cs CH3 interactions in [CsKA'2]∞, enable an otherwise unfavorable halide metathesis to proceed with mechanochemical assistance. -
Periodic Trends and the S-Block Elements”, Chapter 21 from the Book Principles of General Chemistry (Index.Html) (V
This is “Periodic Trends and the s-Block Elements”, chapter 21 from the book Principles of General Chemistry (index.html) (v. 1.0M). This book is licensed under a Creative Commons by-nc-sa 3.0 (http://creativecommons.org/licenses/by-nc-sa/ 3.0/) license. See the license for more details, but that basically means you can share this book as long as you credit the author (but see below), don't make money from it, and do make it available to everyone else under the same terms. This content was accessible as of December 29, 2012, and it was downloaded then by Andy Schmitz (http://lardbucket.org) in an effort to preserve the availability of this book. Normally, the author and publisher would be credited here. However, the publisher has asked for the customary Creative Commons attribution to the original publisher, authors, title, and book URI to be removed. Additionally, per the publisher's request, their name has been removed in some passages. More information is available on this project's attribution page (http://2012books.lardbucket.org/attribution.html?utm_source=header). For more information on the source of this book, or why it is available for free, please see the project's home page (http://2012books.lardbucket.org/). You can browse or download additional books there. i Chapter 21 Periodic Trends and the s-Block Elements In previous chapters, we used the principles of chemical bonding, thermodynamics, and kinetics to provide a conceptual framework for understanding the chemistry of the elements. Beginning in Chapter 21 "Periodic Trends and the ", we use the periodic table to guide our discussion of the properties and reactions of the elements and the synthesis and uses of some of their commercially important compounds. -
Single Crystal X-Ray Structure Analyses of Thallides: Halide Incorporation and Mixed Alkali Sites in A8tl11x (A = K, Rb, Cs; X = Cl, Br) †
Proceedings Single Crystal X-ray Structure Analyses of Thallides: Halide Incorporation and Mixed Alkali Sites in A8Tl11X (A = K, Rb, Cs; X = Cl, Br) † Stefanie Gärtner 1,2,* and Susanne Tiefenthaler1 1 Institute of Inorganic Chemistry, University of Regensburg, 93040 Regensburg, Germany; [email protected] 2 Central Analytics (X-Ray Dept.), University of Regensburg, 93040 Regensburg, Germany * Correspondence: [email protected]; Tel.: +49-941-943-4446 † Presented at the 1st International Electronic Conference on Crystals, 21–31 May 2018. Available online: https://sciforum.net/conference/IECC_2018. Published: 21 May 2018 Abstract: A8Tl11 (A = alkali metal) compounds have been known since the investigations of Corbett et al. in 1995 and still are matter of current discussions as the compound includes one extra electron referred to the charge of the Tl117− cluster. Attempts to substitute the charge by incorporation of a halide atom succeeded for the lightest homologue of the group, Cs8Ga11Cl, and powder diffraction experiments for the heavier homologues also suggested the formation of analogous compounds. However, X-ray single crystal studies on A8Tl11X to prove this substitution and to provide a deeper insight into the influence on the thallide substructure have not yet been performed, probably due to severe absorption combined with air and moisture sensitivity for this class of compounds. In our contribution we present single crystal X-ray analyses of the new compounds Cs8Tl11Cl0.8, Cs8Tl11Br0.9 and Cs5Rb3Tl11Cl0.5. It is shown that a (partial) incorporation of halide can also be indirectly determined by examination of the Tl-Tl distances for low resolved data sets, e.g., for Cs5.7K2.3Tl11Cl?. -
Weak Functional Group Interactions Revealed Through Metal-Free Active Template Rotaxane Synthesis
ARTICLE https://doi.org/10.1038/s41467-020-14576-7 OPEN Weak functional group interactions revealed through metal-free active template rotaxane synthesis Chong Tian 1,2, Stephen D.P. Fielden 1,2, George F.S. Whitehead 1, Iñigo J. Vitorica-Yrezabal1 & David A. Leigh 1* 1234567890():,; Modest functional group interactions can play important roles in molecular recognition, catalysis and self-assembly. However, weakly associated binding motifs are often difficult to characterize. Here, we report on the metal-free active template synthesis of [2]rotaxanes in one step, up to 95% yield and >100:1 rotaxane:axle selectivity, from primary amines, crown ethers and a range of C=O, C=S, S(=O)2 and P=O electrophiles. In addition to being a simple and effective route to a broad range of rotaxanes, the strategy enables 1:1 interactions of crown ethers with various functional groups to be characterized in solution and the solid state, several of which are too weak — or are disfavored compared to other binding modes — to be observed in typical host–guest complexes. The approach may be broadly applicable to the kinetic stabilization and characterization of other weak functional group interactions. 1 Department of Chemistry, University of Manchester, Manchester M13 9PL, UK. 2These authors contributed equally: Chong Tian, Stephen D. P. Fielden. *email: [email protected] NATURE COMMUNICATIONS | (2020) 11:744 | https://doi.org/10.1038/s41467-020-14576-7 | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | https://doi.org/10.1038/s41467-020-14576-7 he bulky axle end-groups of rotaxanes mechanically lock To explore the scope of this unexpected method of rotaxane Trings onto threads, preventing the dissociation of the synthesis, here we carry out a study of the reaction with a series of components even if the interactions between them are not related electrophiles. -
Substituted Polythiophenes from Highly Reactive Zinc Reagents
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications -- Chemistry Department Published Research - Department of Chemistry 1998 SUBSTITUTED POLYTHIOPHENES FROM HIGHLY REACTIVE ZINC REAGENTS Reuben D. Rieke Follow this and additional works at: https://digitalcommons.unl.edu/chemfacpub Part of the Analytical Chemistry Commons, Medicinal-Pharmaceutical Chemistry Commons, and the Other Chemistry Commons This Article is brought to you for free and open access by the Published Research - Department of Chemistry at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications -- Chemistry Department by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. USO05756653A United States Patent 19 11 Patent Number: 5,756,653 Rieke 45 Date of Patent: May 26, 1998 54 SUBSTITUTED POLYTHIOPHENES FROM J.K. Gawronski, Tetrahedron Letters, 25, 2605 (1984). HGHLY REACTWE ZNC REAGENTS J. Grondin et al., J. Organomet. Chem, 362. 237 (1989). J.J. Habeeb et al., J. Organomet. Chem, 185, 117 (1980). 75) Inventor: Reuben D. Rieke, Lincoln, Nebr. B.H. Han et al., J. Org. Chem, 47, 5030 (1982). B.H. Han et al., J. of the Korean Chemical Society, 29,557 73) Assignee: Board of Regents of the University of (1985). Nebraska, Lincoln, Nebr. S.M. Hannicket al., J. Org. Chem, 48, 3833 (1983). S. W. Hansen et al., J. Fluorine Chem., 35, 415 (1987). 21 Appl. No.: 432,995 P.L. Heinze et al., J. Fluorine Chem., 31. 115 (1986). M. Isobe et al., Chem. Lett, 679 (1977). 22 Filed: May 2, 1995 R.A. Kjonaas et al., J. Org. Chem, 51,3993 (1986). -
ESR of Alkali Metal Dinitrobenzene Salts in Dimethoxyetbane DME*
400 LETTERS TO THE EDITOR J. CHEM. PHYS., VOL. 46, 1967 atoms give 38, of which six must be used for the to 0.18 G at -50°C. The potassium splitting decreases halogens leaving 32 for the metallic cluster. from 0.21 to 0.13 G, and the cesium splitting from 2.46 From the agreement between theory and observa to 2.04 G, over this temperature range. We have ob tion the conclusion is drawn that "electron in a box" served a similar temperature dependence for the alkali theory can be useful in understanding metal atom metal salts of o-dinitrobenzene and nitrobenzene. In clusters, its simplicity being particularly attractive. addition, for each alkali metal, the metal hyperfine splitting is of the same magnitude in the salts of '" This research was supported by the Chemical Directorate of the U.S. Air Force Office of Scientific Research, Grant No. m-dinitrobenzene, o-dinitrobenzene, and nitrobenzene. AF-AFOSR-245-65. On cooling the Cs salt, the hyperfine lines broaden, 1 F. A. Cotton and T. E. Haas, Inorg. Chern. 3,10 (1964). and at - 60°C a small nitrogen splitting of about 0.25 G 2 R. V. Lindsey, Jr., G. W. Parshall, and U. G. Stolberg, Inorg. Chern. 5, 109 (1966). can be resolved. The other nitrogen splitting is now 8.9 G, and even though two inequivalent nitrogens are observed at -60°C, we still observe an equivalent pair ESR of Alkali Metal Dinitrobenzene Salts of protons. in Dimethoxyetbane DME* Cation motion from one nitro group to the other, or cation motion which rotates the nitro groups in and Cm-YUAN LING AND JULIEN GENDELL out of the molecular plane, could account for these Department of Chemistry, University of Michigan facts. -
Rotaxanes and Catenanes by Click Chemistry
Mini Review Rotaxanes and Catenanes by Click Chemistry Ognjen Sˇ. Miljanic´a, William R. Dichtela, b, Ivan Aprahamiana, Rosemary D. Rohdeb, Heather D. Agnewb, James R. Heathb* and J. Fraser Stoddarta* a California NanoSystems Institute and Department of Chemistry and Biochemistry, University of California, Los Angeles, 405 Hilgard Avenue, Los Angeles, California 90095, USA, E-mail: [email protected] b Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, Pasadena, CA 91125, USA, E-mail: [email protected] Keywords: Catenanes, Click chemistry, Interlocked molecules, Rotaxanes, Self-assembly, Surface chemistry Received: June 1, 2007; Accepted: July 11, 2007 DOI: 10.1002/qsar.200740070 Abstract Copper(I)-catalyzed Huisgen 1,3-dipolar cycloaddition between terminal alkynes and azides – also known as the copper (Cu)-catalyzed Azide-Alkyne Cycloaddition (CuAAC) – has been used in the syntheses of molecular compounds with diverse structures and functions, owing to its functional group tolerance, facile execution, and mild reaction conditions under which it can be promoted. Recently, rotaxanes of four different structural types, as well as donor/acceptor catenanes, have been prepared using CuAAC, attesting to its tolerance to supramolecular interactions as well. In one instance of a rotaxane synthesis, the catalytic role of copper has been combined successfully with its previously documented ability to preorganize rotaxane precursors, i.e., form pseudoro- taxanes. The crystal structure of a donor/acceptor catenane formed using the CuAAC reaction indicates that any secondary [p···p] interactions between the 1,2,3-triazole ring and the bipyridinium p-acceptor are certainly not destabilizing. Finally, the preparation of robust rotaxane and catenane molecular monolayers onto metal and semiconductor surfaces is premeditated based upon recent advances in the use of the Huisgen reaction for surface functionalization. -
Structural Evaluation and Solution Integrity of Alkali Metal Salt Complexes of the Manganese 12-Metallacrown-4 (12-MC-4) Structural Type
6184 Inorg. Chem. 1996, 35, 6184-6193 Structural Evaluation and Solution Integrity of Alkali Metal Salt Complexes of the Manganese 12-Metallacrown-4 (12-MC-4) Structural Type Brian R. Gibney,† Hsin Wang, Jeff W. Kampf, and Vincent L. Pecoraro* Willard H. Dow Laboratories, Department of Chemistry, The University of Michigan, Ann Arbor, Michigan 48109-1055 ReceiVed April 4, 1996X The preparation of a variety of salt complexes of [12-MCMn(III)N(shi)-4] (1) provides the structural basis for the first quantitative investigation of the cation and anion selectivity of metallacrowns. The preparation, X-ray crystal - - structures, and solution integrities of crystalline salts (LiCl2)[12-MCMn(III)N(shi)-4] ([(LiCl2)‚1] ), (Li(trifluoro- + + acetate))[12-MCMn(III)N(shi)-4] ([(LiTFA)‚1]), (Li)[12-MCMn(III)N(shi)-4] ([(Li)‚1] ), (NaBr)2[12-MCMn(III)N(shi)-4] ([(NaBr)2‚1]), and (KBr)2[12-MCMn(III)N(shi)-4] ([(KBr)2‚1]) of the metallacrown [12-MCMn(III)N(shi)-4] (1) are described. Each salt complex of the metallacrown forms from a generic one-step, high-yield synthesis giving 1:1 metal:metallacrown adducts with lithium and 2:1 metal:metallacrown complexes with sodium and potassium ions. On the basis of synthetic preference, the trend for the cation affinity is Li+ > Na+ > K+ and that for anion - - - - - affinity is Cl > Br > TFA > F I3 . The 12-metallacrown-4 structural parameters compare favorably with those of 12-crown-4, an organic crown≈ ether, as well as with those of the topologically similar alkali metal complexes of porphyrin and phthalocyanine dianions, solidifying the structural analogy between metallacrowns and crown ethers. -
The Metastability of an Electrochemically Controlled
[28]W. L. Jorgensen, J. Tirado-Rives, J. Am. Chem. Soc. 1988, 110, 1657. guise of bistable [2]rotaxanes in which the ring component can [29]Gaussian 98 (Revision A.11.3), M. J. Frisch, G. W. Trucks, H. B. Schlegel, G. E. be induced[5] to move relative to the dumbbell-shaped one by Scuseria, M. A. Robb, J. R. Cheeseman, V. G. Zakrzewski, J. A. Montgomery, R. E. Stratmann, J. C. Burant, S. Dapprich, J. M. Millam, A. D. Daniels, K. N. altering the redox characteristics of the molecules. Such Kudin, M. C. Strain, O. Farkas, J. Tomasi, V. Barone, M. Cossi, R. Cammi, B. precisely controllable nanoscale molecular machines and Mennucci, C. Pomelli, C. Adamo, S. Clifford, J. Ochterski, G. A. Petersson, switches have attracted a lot of attention[2, 3] because of their P. Y. Ayala, Q. Cui, K. Morokuma, D. K. Malick, A. D. Rabuck, K. Raghava- potential to meet the expectations of a visionary[6] and to act as chari, J. B. Foresman, J. Cioslowski, J. V. Ortiz, B. B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R. Gomperts, R. L. Martin, D. J. Fox, T. some of the smallest components for the engineering of Keith, M. A. Al-Laham, C. Y. Peng, A. Nanayakkara, C. Gonzalez, M. nanoelectromechanical systems (NEMs) and the fabrication of Challacombe, P. M. W. Gill, B. G. Johnson, W. Chen, M. W. Wong, J. L. nanoelectronic devices.[7] Andres, M. Head-Gordon, E. S. Replogle, J. A. Pople, Gaussian, Inc., Although the redox-switching properties of numerous bista- Pittsburgh, PA, 2002. -
Molecular Nanoelectronics
Proceedings of the IEEE, 2010 1 Molecular Nanoelectronics Dominique Vuillaume photo-, electro-, iono-, magneto-, thermo-, mechanico or Abstract—Molecular electronics is envisioned as a promising chemio-active effects at the scale of structurally and candidate for the nanoelectronics of the future. More than a functionally organized molecular architectures" (adapted from possible answer to ultimate miniaturization problem in [3]). In the following, we will review recent results about nanoelectronics, molecular electronics is foreseen as a possible nano-scale devices based on organic molecules with size way to assemble a large numbers of nanoscale objects (molecules, nanoparticules, nanotubes and nanowires) to form new devices ranging from a single molecule to a monolayer. However, and circuit architectures. It is also an interesting approach to problems and limitations remains whose are also discussed. significantly reduce the fabrication costs, as well as the The structure of the paper is as follows. Section II briefly energetical costs of computation, compared to usual describes the chemical approaches used to manufacture semiconductor technologies. Moreover, molecular electronics is a molecular devices. Section III discusses technological tools field with a large spectrum of investigations: from quantum used to electrically contact the molecule from the level of a objects for testing new paradigms, to hybrid molecular-silicon CMOS devices. However, problems remain to be solved (e.g. a single molecule to a monolayer. Serious challenges for better control of the molecule-electrode interfaces, improvements molecular devices remain due to the extreme sensitivity of the of the reproducibility and reliability, etc…). device characteristics to parameters such as the molecule/electrode contacts, the strong molecule length Index Terms—molecular electronics, monolayer, organic attenuation of the electron transport, for instance. -
Structural Chemistry of Halide Including Thallides A8tl11x1− N
crystals Article Structural Chemistry of Halide including Thallides A8Tl11X1−n (A = K, Rb, Cs; X = Cl, Br; n = 0.1–0.9) Stefanie Gärtner 1,2,* ID , Susanne Tiefenthaler 1, Nikolaus Korber 1 ID , Sabine Stempfhuber 2 and Birgit Hischa 2 1 Institute of Inorganic Chemistry, University of Regensburg, 93040 Regensburg, Germany; [email protected] (S.T.); [email protected] (N.K.) 2 Central Analytics, X-ray Crystallography Dept., University of Regensburg, 93040 Regensburg, Germany; [email protected] (S.S.); [email protected] (B.H.) * Correspondence: [email protected]; Tel.: +49-941-943-4446 Received: 23 July 2018; Accepted: 7 August 2018; Published: 10 August 2018 Abstract: A8Tl11 (A = alkali metal) compounds have been known since the investigations of Corbett et al. in 1995 and are still a matter of current discussions as the compound includes one extra 7− electron referred to the charge of the Tl11 cluster. Attempts to substitute this additional electron by incorporation of a halide atom succeeded in the preparation of single crystals for the lightest triel homologue of the group, Cs8Ga11Cl, and powder diffraction experiments for the heavier homologues also suggested the formation of analogous compounds. However, X-Ray single crystal studies on A8Tl11X to prove this substitution and to provide a deeper insight into the influence on the thallide substructure have not yet been performed, probably due to severe absorption combined with air and moisture sensitivity for this class of compounds. Here, we present single crystal X-Ray structure analyses of the new compounds Cs8Tl11Cl0.8, Cs8Tl11Br0.9, Cs5Rb3Tl11Cl0.5, Cs5.7K2.3Tl11Cl0.6 and K4Rb4Tl11Cl0.1.