Cysteine-Stabilized Αβ Defensins
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The Heme Sensing Response Regulator Hssr in Staphylococcus Aureus
Thomsen et al. BMC Microbiology 2010, 10:307 http://www.biomedcentral.com/1471-2180/10/307 RESEARCH ARTICLE Open Access The heme sensing response regulator HssR in Staphylococcus aureus but not the homologous RR23 in Listeria monocytogenes modulates susceptibility to the antimicrobial peptide plectasin Line E Thomsen1*, Caroline T Gottlieb2,5, Sanne Gottschalk1, Tim T Wodskou3, Hans-Henrik Kristensen4, Lone Gram2, Hanne Ingmer1 Abstract Background: Host defence peptides (HDPs), also known as antimicrobial peptides (AMPs), have emerged as potential new therapeutics and their antimicrobial spectrum covers a wide range of target organisms. However, the mode of action and the genetics behind the bacterial response to HDPs is incompletely understood and such knowledge is required to evaluate their potential as antimicrobial therapeutics. Plectasin is a recently discovered HDP active against Gram-positive bacteria with the human pathogen, Staphylococcus aureus (S. aureus) being highly susceptible and the food borne pathogen, Listeria monocytogenes (L. monocytogenes) being less sensitive. In the present study we aimed to use transposon mutagenesis to determine the genetic basis for S. aureus and L. monocytogenes susceptibility to plectasin. Results: In order to identify genes that provide susceptibility to plectasin we constructed bacterial transposon mutant libraries of S. aureus NCTC8325-4 and L. monocytogenes 4446 and screened for increased resistance to the peptide. No resistant mutants arose when L. monocytogenes was screened on plates containing 5 and 10 fold Minimal Inhibitory Concentration (MIC) of plectasin. However, in S. aureus, four mutants with insertion in the heme response regulator (hssR) were 2-4 fold more resistant to plectasin as compared to the wild type. -
Investigation on the Role of Plant Defensin Proteins in Regulating Plant-Verticillium Longisporum Interactions in Arabidopsis Thaliana
Aus dem Institut für Phytopathologie der Christian-Albrechts-Universität zu Kiel Investigation on the role of plant defensin proteins in regulating plant-Verticillium longisporum interactions in Arabidopsis thaliana Dissertation zur Erlangung des Doktorgrades der Agrar- und Ernährungswissenschaftlichen Fakultät der Christian-Albrechts-Universität zu Kiel vorgelegt von M.Sc. Shailja Singh aus Lucknow, India Kiel, 2020 Dekan/in: Professor Dr. Dr. Christian Henning 1. Berichterstatter: Prof. Dr. Daguang Cai 2. Berichterstatter: Prof. Dr. Professor Joseph-Alexander Verreet Tag der mündlichen Prüfung: 17.06.2020 Schriftenreihe des Instituts für Phytopathologie der Christian-Albrechts-Universität zu Kiel; Heft 7, 2020 ISSN: 2197-554X Gedruckt mit Genehmigung der Agrar- und Ernährungswissenschaftlichen Fakultät der Christian-Albrechts-Universität zu Kiel Table of Contents Table of Contents Table of Contents ........................................................................................................... I List of Figures ................................................................................................................ V List of Tables ............................................................................................................... VII List of Abbreviations .................................................................................................. VIII Chapter I: General Introduction .................................................................................... 1 1 Induced plant defense responses -
Defensin-Like Peptides in Wheat Analyzed by Whole-Transcriptome Sequencing: a Focus on Structural Diversity and Role in Induced Resistance
Defensin-like peptides in wheat analyzed by whole-transcriptome sequencing: a focus on structural diversity and role in induced resistance Tatyana I. Odintsova1, Marina P. Slezina1, Ekaterina A. Istomina1, Tatyana V. Korostyleva1, Artem S. Kasianov1, Alexey S. Kovtun2, Vsevolod J. Makeev1, Larisa A. Shcherbakova3 and Alexander M. Kudryavtsev1 1 Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia 2 Moscow Institute of Physics and Technology, Dolgoprudny, Moscow Region, Russia 3 All-Russian Research Institute of Phytopathology, B. Vyazyomy, Moscow Region, Russia ABSTRACT Antimicrobial peptides (AMPs) are the main components of the plant innate immune system. Defensins represent the most important AMP family involved in defense and non-defense functions. In this work, global RNA sequencing and de novo transcriptome assembly were performed to explore the diversity of defensin-like (DEFL) genes in the wheat Triticum kiharae and to study their role in induced resistance (IR) mediated by the elicitor metabolites of a non-pathogenic strain FS-94 of Fusarium sambucinum. Using a combination of two pipelines for DEFL mining in transcriptome data sets, as many as 143 DEFL genes were identified in T. kiharae, the vast majority of them represent novel genes. According to the number of cysteine residues and the cysteine motif, wheat DEFLs were classified into ten groups. Classical defensins with a characteristic 8-Cys motif assigned to group 1 DEFLs represent the most abundant group comprising 52 family members. DEFLs with a characteristic 4- Cys motif CX{3,5}CX{8,17}CX{4,6}C named group 4 DEFLs previously found only Submitted 17 July 2018 in legumes were discovered in wheat. -
Antifungal Defensins and Their Role in Plant Defense
REVIEW ARTICLE published: 02 April 2014 doi: 10.3389/fmicb.2014.00116 Antifungal defensins and their role in plant defense Ariane F. Lacerda1,2 , Érico A. R. Vasconcelos 2,3 , Patrícia Barbosa Pelegrini 2 and Maria F. Grossi de Sa 2,3 * 1 Department of Biochemistry and Molecular Biology, Federal University of Rio Grande do Norte, Natal, Brazil 2 Plant-Pest Interaction Laboratory, Embrapa – Genetic Resources and Biotechnology, Brasília, Brazil 3 Catholic University of Brasilia, Brasília, Brazil Edited by: Since the beginning of the 90s lots of cationic plant, cysteine-rich antimicrobial peptides Tzi Bun Ng, The Chinese University of (AMP) have been studied. However, Broekaert et al. (1995) only coined the term “plant Hong Kong, China defensin,” after comparison of a new class of plant antifungal peptides with known insect Reviewed by: defensins. From there, many plant defensins have been reported and studies on this class Noton Kumar Dutta, Johns Hopkins University, USA of peptides encompass its activity toward microorganisms and molecular features of the Dmitri Debabov, NovaBay mechanism of action against bacteria and fungi. Plant defensins also have been tested Pharmaceuticals, USA as biotechnological tools to improve crop production through fungi resistance generation *Correspondence: in organisms genetically modified (OGM). Its low effective concentration towards fungi, Maria F.Grossi de Sa, Plant-Pest ranging from 0.1 to 10 μM and its safety to mammals and birds makes them a better Interaction Laboratory, Embrapa – Genetic Resources and choice, in place of chemicals, to control fungi infection on crop fields. Herein, is a review of Biotechnology, PqEB Avenue W5 the history of plant defensins since their discovery at the beginning of 90s, following the Norte (final), P.O. -
(Amps) and Their Delivery Strategies for Wound Infections
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 17 July 2020 doi:10.20944/preprints202007.0375.v1 Peer-reviewed version available at Pharmaceutics 2020, 12, 840; doi:10.3390/pharmaceutics12090840 1 Review 2 An Update on Antimicrobial Peptides (AMPs) and 3 Their Delivery Strategies for Wound Infections 4 Viorica Patrulea 1,2,*, Gerrit Borchard 1,2 and Olivier Jordan 1,2,* 5 1 University of Geneva, Institute of Pharmaceutical Sciences of Western Switzerland, 1 Rue Michel Servet, 6 1211 Geneva, Switzerland 7 2 University of Geneva, Section of Pharmaceutical Sciences, 1 Rue Michel Servet, 1211 Geneva, Switzerland 8 * Correspondence: [email protected]; Tel.: +41-22379-3323 (V.P.); [email protected]; Tel.: +41- 9 22379-6586 (O.J.) 10 11 Abstract: Bacterial infections occur when wound healing fails to reach the final stage of healing, 12 usually hindered by the presence of different pathogens. Different topical antimicrobial agents are 13 used to inhibit bacterial growth due to antibiotic failure in reaching the infected site accompanied 14 very often by an increased drug resistance and other side effects. In this review, we focus on 15 antimicrobial peptides (AMPs), especially those with a high potential of efficacy against multidrug- 16 resistant and biofilm-forming bacteria and fungi present in wound infections. Currently, different 17 AMPs undergo preclinical and clinical phase to combat infection-related diseases. AMP dendrimers 18 (AMPDs) have been mentioned as potent microbial agents. Various AMP delivery strategies, such as 19 polymers, scaffolds, films and wound dressings, organic and inorganic nanoparticles, to combat 20 infection and modulate the healing rate have been discussed as well. -
Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins
Journal of Fungi Article Histidine-Rich Defensins from the Solanaceae and Brasicaceae Are Antifungal and Metal Binding Proteins Mark R. Bleackley 1, Shaily Vasa 1, Peta J. Harvey 2 , Thomas M. A. Shafee 1, Bomai K. Kerenga 1 , Tatiana P. Soares da Costa 1, David J. Craik 2 , Rohan G. T. Lowe 1 and Marilyn A. Anderson 1,* 1 Department of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC 3086, Australia; [email protected] (M.R.B.); [email protected] (S.V.); [email protected] (T.M.A.S.); [email protected] (B.K.K.); [email protected] (T.P.S.d.C.); [email protected] (R.G.T.L.) 2 Institute for Molecular Bioscience, The University of Queensland, Brisbane, QID 4072, Australia; [email protected] (P.J.H.); [email protected] (D.J.C.) * Correspondence: [email protected] Received: 15 July 2020; Accepted: 19 August 2020; Published: 24 August 2020 Abstract: Plant defensins are best known for their antifungal activity and contribution to the plant immune system. The defining feature of plant defensins is their three-dimensional structure known as the cysteine stabilized alpha-beta motif. This protein fold is remarkably tolerant to sequence variation with only the eight cysteines that contribute to the stabilizing disulfide bonds absolutely conserved across the family. Mature defensins are typically 46–50 amino acids in length and are enriched in lysine and/or arginine residues. Examination of a database of approximately 1200 defensin sequences revealed a subset of defensin sequences that were extended in length and were enriched in histidine residues leading to their classification as histidine-rich defensins (HRDs). -
Defensins of Grasses: a Systematic Review
biomolecules Review Defensins of Grasses: A Systematic Review , Tatyana I. Odintsova * y , Marina P. Slezina y and Ekaterina A. Istomina Laboratory of Molecular-Genetic Bases of Plant Immunity, Vavilov Institute of General Genetics RAS, 119333 Moscow, Russia; [email protected] (M.P.S.); [email protected] (E.A.I.) * Correspondence: [email protected] These authors contributed equally to this work. y Received: 8 June 2020; Accepted: 8 July 2020; Published: 10 July 2020 Abstract: The grass family (Poaceae) is one of the largest families of flowering plants, growing in all climatic zones of all continents, which includes species of exceptional economic importance. The high adaptability of grasses to adverse environmental factors implies the existence of efficient resistance mechanisms that involve the production of antimicrobial peptides (AMPs). Of plant AMPs, defensins represent one of the largest and best-studied families. Although wheat and barley seed γ-thionins were the first defensins isolated from plants, the functional characterization of grass defensins is still in its infancy. In this review, we summarize the current knowledge of the characterized defensins from cultivated and selected wild-growing grasses. For each species, isolation of defensins or production by heterologous expression, peptide structure, biological activity, and structure–function relationship are described, along with the gene expression data. We also provide our results on in silico mining of defensin-like sequences in the genomes of all described grass species and discuss their potential functions. The data presented will form the basis for elucidation of the mode of action of grass defensins and high adaptability of grasses to environmental stress and will provide novel potent molecules for practical use in medicine and agriculture. -
Basic Insight on Plant Defensins
Basic insight on plant defensins @ Roxana Portieles, Camilo Ayra, Orlando Borrás Plant Division, Center for Genetic Engineering and Biotechnology, CIGB Ave 31 / 158 and 190, Playa, PO Box 6162, Havana 10 600, Cuba E-mail: [email protected] ABSTRACT REVIEW Defensins are small cysteine-rich peptides with antimicrobial activity. Plant defensins have a characteristic three- dimensional folding pattern that is stabilized by eight disulfide-linked cysteines. This pattern is very similar to defense peptides of mammals and insects, suggesting an ancient and conserved origin. Functionally, these proteins exhibit a diverse array of biological activities, although they all serve a common function as defenders of their hosts. Plant defensins are active against a broad range of phytopathogenic fungi and even against human pathogens, which indicates their potential in therapeutics. This review briefly describes the distribution, structure, function and putative modes of antimicrobial activity of plant defensins and reflects their potential in agriculture and medical applications. Key works: defensin, cysteine-rich peptides, mode of action Biotecnología Aplicada 2006;23:75-78 RESUMEN Conocimientos básicos acerca de las defensinas de plantas. Las defensinas son pequeños péptidos ricos en cisteína con actividad antimicrobiana. Las defensinas de plantas poseen un característico patrón de plegamiento tri-dimensional estabilizado por ocho puentes disulfuro de residuo de cisteinas. Este patrón comparte una alta semejanza con los péptidos de defensa de mamíferos e insectos, sugiriendo un origen común conservado. Funcionalmente estas proteínas exhiben un conjunto diverso de actividades biológicas, aunque todas están al servicio de una función común, como defensoras de sus hospederos. Las defensinas de plantas se activan contra un amplio rango de hongos fitopatogénicos e incluso contra patógenos humanos, lo cual indica su potencial para el desarrollo de terapéuticos. -
Modes of Action of a Bi-Domain Plant Defensin Mtdef5 Against a Bacterial Pathogen Xanthomonas Campestris
fmicb-09-00934 May 14, 2018 Time: 15:47 # 1 ORIGINAL RESEARCH published: 16 May 2018 doi: 10.3389/fmicb.2018.00934 Modes of Action of a Bi-domain Plant Defensin MtDef5 Against a Bacterial Pathogen Xanthomonas campestris Siva L. S. Velivelli1, Kazi T. Islam1†, Eric Hobson1,2 and Dilip M. Shah1* 1 Donald Danforth Plant Science Center, St. Louis, MO, United States, 2 Department of Biology, Jackson State University, Jackson, MS, United States Defensins are small cysteine-rich endogenous host defense peptides expressed in all higher plants. They are thought to be important players in the defense arsenal of plants against fungal and oomycete pathogens. However, little is known regarding the antibacterial activity of these peptides. The genome of the model legume Medicago truncatula contains 63 genes each encoding a defensin with a tetradisulfide array. Edited by: A unique bi-domain defensin, designated MtDef5, was recently characterized for Santi M. Mandal, its potent broad-spectrum antifungal activity. This 107-amino acid defensin contains Indian Institute of Technology two domains, 50 amino acids each, linked by a short peptide APKKVEP. Here, we Kharagpur, India characterize antibacterial activity of this defensin and its two domains, MtDef5A and Reviewed by: Muhammad Saleem, MtDef5B, against two economically important plant bacterial pathogens, Gram-negative University of Kentucky, United States Xanthomonas campestris and Gram-positive Clavibacter michiganensis. MtDef5 inhibits Esther Orozco, Centro de Investigación y de Estudios the growth of X. campestris, but not C. michiganensis, at micromolar concentrations. Avanzados del IPN, Mexico MtDef5B, but not MtDef5A, exhibits more potent antibacterial activity than its parent *Correspondence: MtDef5. -
Design and Recombination Expression of a Novel Plectasin-Derived Peptide MP1106 and Its Properties Against Staphylococcus Aureus
Appl Microbiol Biotechnol DOI 10.1007/s00253-014-6077-9 BIOTECHNOLOGICALLY RELEVANT ENZYMES AND PROTEINS Design and recombination expression of a novel plectasin-derived peptide MP1106 and its properties against Staphylococcus aureus Xintao Cao & Yong Zhang & Ruoyu Mao & Da Teng & Xiumin Wang & Jianhua Wang Received: 4 August 2014 /Revised: 5 September 2014 /Accepted: 7 September 2014 # Springer-Verlag Berlin Heidelberg 2014 Abstract A novel antimicrobial peptide MP1106 was de- hemolytic activity of only 1.16 % at a concentration of signed based on the parental peptide plectasin with four mu- 512 μg/ml and remained stable in human serum at 37 °C for tational sites and a high level of expression in Pichia pastoris 24 h. Furthermore, the activity of rMP1106 was minorly X-33 via the pPICZαA plasmid was achieved. The concen- affected by 10 mM dithiothreitol and 20 % dimethylsulfoxide. tration of total secreted protein in the fermented supernatant Our results indicate that MP1106 can be produced on a large was 2.134 g/l (29 °C), and the concentration of recombinant scale and has potential as a therapeutic drug against S. aureus. MP1106 (rMP1106) reached 1,808 mg/l after a 120-h induc- tion in a 5-l fermentor. The rMP1106 was purified using a Keywords MP1106 . Antimicrobial peptide . Pichia cation-exchange column, and the yield was 831 mg/l with pastoris . Stability . Staphylococcus aureus 94.68 % purity. The sample exhibited a narrow spectrum against some Gram-positive bacteria and strong antimicrobial activity against Staphylococcus aureus at low minimal inhib- Introduction itory concentrations (MICs) of 0.014, 1.8, 0.45, and 0.91 μM to S. -
Synergistic Interactions Between Antimicrobial Peptides Derived From
Journal name: International Journal of Nanomedicine Article Designation: Original Research Year: 2017 Volume: 12 International Journal of Nanomedicine Dovepress Running head verso: Umerska et al Running head recto: Synergistic interactions between antimicrobial peptides open access to scientific and medical research DOI: http://dx.doi.org/10.2147/IJN.S139625 Open Access Full Text Article ORIGINAL RESEARCH Synergistic interactions between antimicrobial peptides derived from plectasin and lipid nanocapsules containing monolaurin as a cosurfactant against Staphylococcus aureus Anita Umerska1 Abstract: Development of effective antibacterial agents for the treatment of infections Viviane Cassisa2 caused by Gram-positive bacteria resistant to existing antibiotics, such as methicillin-resistant Guillaume Bastiat1 Staphylococcus aureus (MRSA), is an area of intensive research. In this work, the antibacterial Nada Matougui1 efficacy of two antimicrobial peptides derived from plectasin, AP114 and AP138, used alone and Hassan Nehme1 in combination with monolaurin-lipid nanocapsules (ML-LNCs) was evaluated. Several inter- Florence Manero3 esting findings emerged from the present study. First, ML-LNCs and both plectasin derivatives showed potent activity against all 14 tested strains of S. aureus, independent of their resistance Matthieu Eveillard4 phenotype. Both peptides displayed a considerable adsorption (33%–62%) onto ML-LNCs Patrick Saulnier1 without having an important impact on the particle properties such as size. The combinations 1MINT, UNIV Angers, INSERM 1066, of peptide with ML-LNC displayed synergistic effect against S. aureus, as confirmed by two CNRS 6021, Université Bretagne Loire, Angers, Cedex, France; methods: checkerboard and time-kill assays. This synergistic interaction enables a dose reduc- 2Laboratoire de bactériologie, CHU tion and consequently decreases the risk of toxicity and has the potential of minimizing the 3 Angers, France; SCIAM (Service development of resistance. -
In Silico Structural Characterization of Class II Plant Defensins
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.27.065185; this version posted April 29, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. In silico Structural Characterization of Class II Plant Defensins from Arabidopsis thaliana Laura S.M. Costa1,2, Állan S. Pires1, Neila B. Damaceno1, Pietra O. Rigueiras1, Mariana R. Maximiano1, Octavio L. Franco1,2,3, William F. Porto3,4* 1 Centro de Análises Proteômicas e Bioquímicas. Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil. 2 Departamento de Biologia, Programa de Pós-Graduação em Genética e Biotecnologia, Universidade Federal de Juiz de Fora, Campus Universitário, Juiz de Fora-MG, Brazil. 3 S-Inova Biotech, Pós-Graduação em Biotecnologia, Universidade Católica Dom Bosco, Campo Grande-MS, Brazil. 4 Porto Reports, Brasília-DF, Brazil – www.portoreports.com *Corresponding author: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.04.27.065185; this version posted April 29, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Defensins compose a polyphyletic group of multifunctional defense peptides. The cis- defensins, also known as cysteine stabilized αβ (CSαβ) defensins, are one of the most ancient defense peptide families.