COVID-19 Vaccine Candidates in Development, Special Focus on Mrna and Viral Vector Platforms Dr
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Immunogenicity of Clinically Relevant SARS-Cov-2 Vaccines
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 7 September 2020 1 Immunogenicity of clinically relevant SARS-CoV-2 vaccines in non-human primates and humans P. J. Klasse (1,*), Douglas F. Nixon (2,*) and John P. Moore (1,+) 1 Department of Microbiology and Immunology; 2 Division of Infectious Diseases, Department of Medicine, Weill Cornell Medical College, New York, NY 10065 *These authors contributed equally +Correspondence: [email protected] Short title: SARS-CoV-2 vaccine immunogenicity Key words: SARS-CoV-2, S-protein, RBD, COVID-19, neutralizing antibodies, serology, T- cells, vaccines, animal models, Operation Warp Speed © 2020 by the author(s). Distributed under a Creative Commons CC BY license. Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 7 September 2020 2 Abstract Multiple preventive vaccines are being developed to counter the COVID-19 pandemic. The leading candidates have now been evaluated in non-human primates (NHPs) and human Phase 1 and/or Phase 2 clinical trials. Several vaccines have already advanced into Phase 3 efficacy trials, while others will do so before the end of 2020. Here, we summarize what is known of the antibody and T-cell immunogenicity of these vaccines in NHPs and humans. To the extent possible, we compare how the vaccines have performed, taking into account the use of different assays to assess immunogenicity and inconsistencies in how the resulting data are presented. We also summarize the outcome of SARS-CoV-2 challenge experiments in immunized macaques, while noting variations in the protocols used, including but not limited to the virus challenge doses. Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 7 September 2020 3 Introduction The COVID-19 pandemic rages unabated and may continue to do so until there is a safe, effective and widely used protective vaccine. -
ADENOVIRUS Adenoviruses Are Common Viruses That Typically Cause Mild Cold- Or Flu-Like Illness
ADENOVIRUS Adenoviruses are common viruses that typically cause mild cold- or flu-like illness. Adenoviruses can cause illness in people of all ages any time of year. ADENOVIRUS Adenoviruses can cause a wide range of illnesses including • common cold- or flu-like symptoms SYMPTOMS • fever • sore throat • pink eye (conjunctivitis) • acute bronchitis (inflammation of the airways of the lungs, sometimes called a “chest cold”) • pneumonia (infection of the lungs, occasionally severe) • diarrhea • acute gastroenteritis (inflammation of the stomach or intestines causing diarrhea, vomiting, nausea, and stomach pain) Less common illnesses caused by adenovirus include bladder infection or inflammation and neurologic disease (conditions that affect the brain and spinal cord). HOW Adenoviruses are usually spread from an infected person to others through ADENOVIRUSES • close personal contact, such as touching or shaking hands SPREAD • the air by coughing and sneezing • touching an object or surface with adenoviruses on it, then touching your mouth, nose, or eyes before washing your hands • contact with stool, for example, during diaper changing Adenoviruses are often resistant to common disinfectants and can remain infectious for long periods of time on surfaces and objects. WHO IS AT RISK FOR SEVERE ADENOVIRUS INFECTION? People with weakened immune systems (including from medications they are taking or from heart or lung diseases) are at higher risk for developing severe adenovirus infection. Certain types of this virus have been linked to more severe illness. Rarely, otherwise healthy people with adenovirus infections will become so ill that they need to be hospitalized and may die. Centers for Disease Control and Prevention National Center for Immunization and Respiratory Diseases HOW TO Protect yourself from getting sick. -
Virus-Associated RNA I–Deleted Adenovirus, a Potential Oncolytic Agent Targeting EBV-Associated Tumors
Research Article Virus-Associated RNA I–Deleted Adenovirus, a Potential Oncolytic Agent Targeting EBV-Associated Tumors Yaohe Wang,1 Shao-An Xue,2 Gunnel Hallden,1 Jennelle Francis,1 Ming Yuan,1 Beverly E. Griffin,2,3 and Nick R. Lemoine1 1Cancer Research UK Molecular Oncology Unit, Institute of Cancer, Barts and the London School of Medicine and Dentistry, Queen Mary University of London; 2Division of Medicine, Hammersmith Hospital, Imperial College London; and 3Imperial College London at St. Mary’s, London, United Kingdom Abstract More recent reports have linked EBV with conventional epithelial Given the growing number of tumor types recognizably cancers of other sites, including breast (3–5), lung (6–9), prostate associated with EBV infection, it is critically important that (7), liver (10), colon (7), and also with lymphoepithelioma-like therapeutic strategies are developed to treat such tumors. carcinoma of the esophagus (11). Given the ever-growing Replication-selective oncolytic adenoviruses represent number of tumor types associated with EBV infection, thera- a promising new platform for anticancer therapy. Virus- peutic strategies to treat EBV-associated tumors may be associated I (VAI) RNAs of adenoviruses are required for considered a high priority in oncology. efficient translation of viral mRNAs. When the VAI gene is Replication-selective, oncolytic viruses provide a new platform deleted, adenovirus replication is impeded in most cells to treat cancer. Promising clinical trial data with mutant (including HEK 293 cells). EBV-encoded small RNA1 is adenoviruses have shown both their antitumor potency and uniformly expressed in most EBV-associated human tumors safety (12, 13). Two main approaches are currently being used to and can functionally substitute for the VAI RNAs of engineer adenoviruses with tumor-selective replication. -
V.5 3/18/2021 1 COVID-19 Vaccine FAQ Sheet
COVID-19 Vaccine FAQ Sheet (updated 3/18/2021) The AST has received queries from transplant professionals and the community regarding the COVID-19 vaccine. The following FAQ was developed to relay information on the current state of knowledge. This document is subject to change and will be updated frequently as new information or data becomes available. What kinds of vaccines are available or under development to prevent COVID-19? There are currently several vaccine candidates in use or under development. In the United States, the Government is supporting six separate vaccine candidates. Several other vaccines are also undergoing development outside of the United States government sponsorship and further information can be found here: NYTimes Coronavirus Vaccine Tracker: https://www.nytimes.com/interactive/2020/science/coronavirus-vaccine- tracker.html Washington Post Vaccine Tracker: https://www.washingtonpost.com/graphics/2020/health/covid-vaccine-update- coronavirus/ v.5 3/18/2021 1 The types of vaccines are as follows (March 1, 2021) 1: Table 1: Vaccines Under Development or Available Through EUA Vaccine Type Compound Name [Sponsor] Clinical Notes Trial Phase mRNA mRNA-1273 [Moderna] Phase 3 Emergency use in U.S., E.U., other countries Approved in Canada BNT162b2 (Comirnaty) [Pfizer] Phase 2/3 Emergency use in U.S., E.U., other countries Also approved in Canada and other countries Replication- AZD1222 (Covishield) Phase 2/3 Emergency use defective [AstraZeneca] in U.K., India, adenoviral other countries vector (not U.S.) JNJ-78326735/Ad26.COV2.S -
Adenovirus Infection of the Large Bowel in HIV Positive Patients J Clin Pathol: First Published As 10.1136/Jcp.45.8.684 on 1 August 1992
684847 (lin Ilathol 1992;45:684--688 Adenovirus infection of the large bowel in HIV positive patients J Clin Pathol: first published as 10.1136/jcp.45.8.684 on 1 August 1992. Downloaded from A Maddox, N Francis, J Moss, C Blanshard, B Gazzard Abstract Recently Janoff et al showed the presence of Aims: To describe the microscopic adenovirus infection of colonic epithelial cells appearance of adenovirus infection in the in five HIV positive patients with diarrhoea, large bowel of human immunodeficiency two cases of which were confirmed by electron virus (HIV) positive patients with diar- microscopy and two by immunofluorescence rhoea. of cultured colonic epithelial cells.5 We now Methods: Large bowel biopsy specimens report the histopathological, immunocyto- from 10 HIV positive patients, eight of chemical, and electron microscopic findings in whom were also infected with other gas- 10 patients with colonic epithelial adenovirus trointestinal pathogens, with diarrhoea infection. were examined, together with six small bowel biopsy specimens from the same group of patients. Eight of the patients Methods had AIDS. The biopsy specimens were Details of patients and their clinical histories examined by light microscopy performed are shown in the table. All were homosexual on haematoxylin and eosin stained and men and all had mild to moderate proctitis on immunoperoxidase preparations, the lat- sigmoidoscopy. Two (cases 3 and 8) had ter using a commercially available anti- contact bleeding. Nine of 10 had a noticeable body (Serotec MCA 489). Confirmation reduction in CD4+ cells to less than 55 mm3 was obtained with electron microscopy. and eight had other gastrointestinal infections Results: The morphological appearance of which might cause diarrhoea. -
Immunogenicity of a New Gorilla Adenovirus Vaccine Candidate for COVID-19
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.22.349951; this version posted October 22, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Immunogenicity of a new gorilla adenovirus vaccine candidate for COVID-19 Stefania Capone1,6, Angelo Raggioli1,6, Michela Gentile1, Simone Battella1, Armin Lahm1, Andrea Sommella1, Alessandra Maria Contino1, Richard A. Urbanowicz2,3,4, Romina Scala1, Federica Barra1, Adriano Leuzzi1, Eleonora Lilli1, Giuseppina Miselli1, Alessia Noto1, Maria Ferraiuolo1, Francesco Talotta1, Theocharis Tsoleridis2,3,4, Concetta Castilletti5, Giulia Matusali5, Francesca Colavita5, Daniele Lapa5, Silvia Meschi5, Maria Capobianchi5, Marco Soriani1, Antonella Folgori1, Jonathan K. Ball2,3,4, Stefano Colloca1 and Alessandra Vitelli1* 1 ReiThera Srl, Rome, Italy 2 School of Life Sciences, The University of Nottingham, UK 3 NIHR Nottingham Biomedical Research Centre, The University of Nottingham, UK 4 Wolfson Centre for Emerging Virus Research, The University of Nottingham, UK 5 National Institute for Infectious Diseases "Lazzaro Spallanzani" IRCCS 6 These authors contributed equally * [email protected] ABSTRACT The COVID-19 pandemic caused by the emergent SARS-CoV-2 coronavirus threatens global public health and there is an urgent need to develop safe and effective vaccines. Here we report the generation and the preclinical evaluation of a novel replication-defective gorilla adenovirus-vectored vaccine encoding the pre-fusion stabilized Spike (S) protein of SARS-CoV2. We show that our vaccine candidate, GRAd- COV2, is highly immunogenic both in mice and macaques, eliciting both functional antibodies which neutralize SARS-CoV-2 infection and block Spike protein binding to the ACE2 receptor, and a robust, Th1- dominated cellular response in the periphery and in the lung. -
Adenoviral Vector COVID-19 Vaccines: Process and Cost Analysis
processes Article Adenoviral Vector COVID-19 Vaccines: Process and Cost Analysis Rafael G. Ferreira 1,* , Neal F. Gordon 2, Rick Stock 2 and Demetri Petrides 3 1 Intelligen Brasil, Sao Paulo 01227-200, Brazil 2 BDO USA, LLP, Boston, MA 02110, USA; [email protected] (N.F.G.); [email protected] (R.S.) 3 Intelligen, Inc., Scotch Plains, NJ 07076, USA; [email protected] * Correspondence: [email protected] Abstract: The COVID-19 pandemic has motivated the rapid development of numerous vaccines that have proven effective against SARS-CoV-2. Several of these successful vaccines are based on the adenoviral vector platform. The mass manufacturing of these vaccines poses great challenges, especially in the context of a pandemic where extremely large quantities must be produced quickly at an affordable cost. In this work, two baseline processes for the production of a COVID-19 adenoviral vector vaccine, B1 and P1, were designed, simulated and economically evaluated with the aid of the software SuperPro Designer. B1 used a batch cell culture viral production step, with a viral titer of 5 × 1010 viral particles (VP)/mL in both stainless-steel and disposable equipment. P1 used a perfusion cell culture viral production step, with a viral titer of 1 × 1012 VP/mL in exclusively disposable equipment. Both processes were sized to produce 400 M/yr vaccine doses. P1 led to a smaller cost per dose than B1 ($0.15 vs. $0.23) and required a much smaller capital investment ($126 M vs. $299 M). The media and facility-dependent expenses were found to be the main contributors to the operating cost. -
Protective Zika Vaccines Engineered to Eliminate Enhancement of Dengue Infection Via Immunodominance Switch
ARTICLES https://doi.org/10.1038/s41590-021-00966-6 Protective Zika vaccines engineered to eliminate enhancement of dengue infection via immunodominance switch Lianpan Dai 1,2,3,8 ✉ , Kun Xu3,8, Jinhe Li2,4,8, Qingrui Huang5, Jian Song 1, Yuxuan Han2, Tianyi Zheng2,4, Ping Gao2,4, Xuancheng Lu6, Huabing Yang 5, Kefang Liu7, Qianfeng Xia3, Qihui Wang 1, Yan Chai1, Jianxun Qi 1, Jinghua Yan 5 ✉ and George F. Gao 1,2,4 ✉ Antibody-dependent enhancement (ADE) is an important safety concern for vaccine development against dengue virus (DENV) and its antigenically related Zika virus (ZIKV) because vaccine may prime deleterious antibodies to enhance natural infections. Cross-reactive antibodies targeting the conserved fusion loop epitope (FLE) are known as the main sources of ADE. We design ZIKV immunogens engineered to change the FLE conformation but preserve neutralizing epitopes. Single vaccination conferred sterilizing immunity against ZIKV without ADE of DENV-serotype 1–4 infections and abrogated maternal–neonatal transmis- sion in mice. Unlike the wild-type-based vaccine inducing predominately cross-reactive ADE-prone antibodies, B cell profiling revealed that the engineered vaccines switched immunodominance to dispersed patterns without DENV enhancement. The crystal structure of the engineered immunogen showed the dimeric conformation of the envelope protein with FLE disruption. We provide vaccine candidates that will prevent both ZIKV infection and infection-/vaccination-induced DENV ADE. IKV is a mosquito-borne pathogen belonging to the genus models12,13,19,20. More importantly, a recent study of pediatric cohorts Flavivirus in the family Flaviviridae1. The 2015–2016 ZIKV in Nicaragua clearly shows that previous ZIKV infection enhanced epidemic spread to 84 countries worldwide, including future risk of DENV2 disease and severity, as well as DENV3 sever- Z2,3 21,22 China . -
Prediction of the Supportive Vaccine Type of the Covid-19 for Public Health
Available online at http://scik.org J. Math. Comput. Sci. 11 (2021), No. 5, 5703-5719 https://doi.org/10.28919/jmcs/5738 ISSN: 1927-5307 PREDICTION OF THE SUPPORTIVE VACCINE TYPE OF THE COVID-19 FOR PUBLIC HEALTH NISHANT NAMDEV, ARVIND KUMAR SINHA* Department of Mathematics, National Institute of Technology, Raipur, India Copyright © 2021 the author(s). This is an open access article distributed under the Creative Commons Attribution License,which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract: The novel corona virus SARS-Cov-2 caused the COVID-19 pandemic and mostly deteriorated the respiratory system. This paper aims to predict the supportive vaccine type (RNA, Non-replicating viral vector, DNA, Inactivated, Protein subunit) of COVID-19 for the human being by the rough set's novel process. The Rough set is an approach to identify patterns in uncertainty. The vaccine dataset, vaccine name, number of tested cases, age, randomize, and vaccine types of COVID-19 have been taken to overcome this disaster. By the rough set method, the supportive vaccine pattern is predicted, and it is observed that the vaccine based on RNA is highly supported to the human beings compared to the others. Extensive tests explained the Pfizer vaccine (RNA) is 95% effective, Moderna (mRNA) is 94.1%, while the Oxford/AstraZeneca (Non-replicating) one is 62%. It shows that the efficiency obtained by the rough set is accurate. A data-intensive computer-based analysis is given for the medical system. Furthermore, we present an extended record of sources that will support the scientific bioinformatics society to attain various sorts of a database linked to SARS-CoV-2 and advances to associate with COVID-19 treatment. -
Epidemiological Parameter Review and Comparative Dynamics of Influenza, Respiratory Syncytial Virus, Rhinovirus, Human Coronavirus, and Adenovirus
medRxiv preprint doi: https://doi.org/10.1101/2020.02.04.20020404; this version posted February 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license . Epidemiological parameter review and comparative dynamics of influenza, respiratory syncytial virus, rhinovirus, human coronavirus, and adenovirus 1;2 1 4 1;5 Julie A. Spencer , Deborah P. Shutt , Sarah K. Moser , Hannah Clegg , 2;3 1 1∗ Helen J. Wearing , Harshini Mukundan , and Carrie A. Manore 1 Los Alamos National Laboratory 2 University of New Mexico Department of Biology 3 University of New Mexico Department of Mathematics and Statistics 4 Bard College 5 Coastal Carolina University ∗ corresponding author February 2, 2020 1 Introduction Influenza-like illness (ILI) accounts for a large burden of annual morbidity and mortality worldwide (WHO 2020). Despite this, diagnostic testing for specific viruses underlying ILI is relatively rare (CDC 2019). This results in a lack of information about the pathogens that make between 9 million and 49 million people sick every year in the United States alone (CDC 2020). Yet knowledge of the specific diseases is necessary for timely treatment to prevent unnecessary suffering and death (Nguyen 2016, Van Asten et al. 2012, Pawelek et al. 2015). ◦ ILI is defined by the CDC as fever of 100 F and a cough and/or a sore throat without a known cause other than influenza (CDC 2020). Defining ILI as a cluster of symptoms rather than a specific disease or diseases is necessary for keeping track of case counts, as well as for important analysis and forecasting (Osthus and Moran 2019). -
Government of India PIB Press Briefing 8Th December 2020 India: Covid-19 Snapshot (As on 8Th December)
Government of India PIB Press Briefing 8th December 2020 India: Covid-19 Snapshot (As on 8th December) Total cases Active cases Deaths Tests 97.03 lakhs 3.83 lakhs 1.40 lakhs 14.8 crores Case Per Million Contribution Death Per Million Tests Per Million 7,031 3.96% 102 107,836 Case Positivity Case Fatality Rate 6.5% 3.2% 1.45% 1.3% (Overall) (Last 1 week) (Overall) (Last 1 week) Cases per million population – Amongst the lowest in the world 45,000 43,495 40,000 34,514 35,000 30,942 30,000 28,594 25,384 25,000 20,000 17,055 15,000 10,000 7,031 5,000 0 India Russia UK Italy Brazil France USA Source: WHO COVID-19 Dashboard updated 7th December 2020 Deaths per million population – Amongst the lowest in the world 993 1,000 902 900 830 839 842 800 700 600 500 400 298 300 200 102 100 0 India Russia Brazil France USA UK Italy Source: WHO COVID-19 Dashboard updated 7th December 2020 Deteriorating Situation in the World 44k USA 217k SPAIN TURKEY in Early - Dec in End - Nov 77k 32k in Mid - Aug 55k in Mid - April in Early - Nov 10k 5k in Early - April in Mid - April Mar May Jul Sep Nov Mar May Jul Sep Nov Mar May Jul Sep Nov 98k INDIA RUSSIA 28k UNITED KINGDOM 34k in Early - Sep in Early - Dec in Mid - Nov 11k in Early - May 6k in Early - April Mar May Jul Sep Nov Mar May Jul Sep Nov Mar May Jul Sep Nov FRANCE BRAZIL 55k 49k in Early - August 125k in Early - Dec in Mid - Nov 26k in End - April Country Trajectory as on 8th December 2020; Mar May Jul Sep Nov Mar May Jul Sep Nov Source: coronavirus.jhu.edu; India: Active cases continue to decline, now below 4 lakhs 10,03,299 10,00,000 8,12,390 8,00,000 6,97,330 5,61,908 6,00,000 3,73,379 3,83,866 4,00,000 2,00,000 0 Top States/UTs contributing to total active cases Active Cases Maharashtra 76,852 Kerala 59,607 Karnataka 24,786 West Bengal 23,829 Delhi 22,486 These 5 states contribute 54% of total active cases in the country COVID-19 Vaccination “I would like to tell my countrymen that our scientists are dutifully engaged in the laboratories. -
Cidofovir Therapy for Adenovirus Pneumonia in an AIDS Patient on HAART: a Case Report
World Journal of AIDS, 2012, 2, 347-350 347 http://dx.doi.org/10.4236/wja.2012.24046 Published Online December 2012 (http://www.SciRP.org/journal/wja) Cidofovir Therapy for Adenovirus Pneumonia in an AIDS Patient on HAART: A Case Report Trong Tony Trinh, Quy Ton, Robert Y. Choi Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, USA. Email: [email protected] Received September 12th, 2012; revised October 29th, 2012; accepted November 10th, 2012 ABSTRACT Introduction: Adenovirus infections are associated with significant morbidity and mortality among immunocompro- mised hosts. Adenovirus pneumonia is a rare and often fatal disease in patients with AIDS. Case Report: We report a case of a 28-year-old woman with advanced HIV/AIDS, who developed pneumonia four weeks after initiation of highly active antiretroviral therapy (HAART). Despite empiric antibiotics, the patient developed worsening hypoxemia and progressive pneumonia on chest x-ray. Culture data from a bronchoalveolar lavage (BAL) was negative for bacteria, fungi, pneumocystis jirovecii, but was positive for adenovirus detected by PCR. After transfer to a tertiary care hospital intensive care unit, a repeat BAL confirmed the presence of adenovirus by immunohistochemical staining. Tissue sam- ples sent for histopathology revealed “smudge cells”. Serum adenovirus viral load was 1.6 × 105 copies/mL. Intrave- nous cidofovir, 1 mg/kg/day, was initiated and scheduled three times a week. The patient exhibited remarkable im- provement and was discharged to home in stable condition after four doses of cidofovir treatment. Discussion: Prior to our case, the few published accounts of HIV patients with adenovirus pneumonia treated with cidofovir have all re- sulted in death.