Isolation and Characterization of Rhizobia Effective with 'Maackia
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Host-Secreted Antimicrobial Peptide Enforces Symbiotic Selectivity in Medicago Truncatula
Host-secreted antimicrobial peptide enforces symbiotic selectivity in Medicago truncatula Qi Wanga, Shengming Yanga, Jinge Liua, Kata Terecskeib, Edit Ábrahámb, Anikó Gombárc, Ágota Domonkosc, Attila Szucs} b, Péter Körmöczib, Ting Wangb, Lili Fodorc, Linyong Maod,e, Zhangjun Feid,e, Éva Kondorosib,1, Péter Kalóc, Attila Keresztb, and Hongyan Zhua,1 aDepartment of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546; bInstitute of Biochemistry, Biological Research Center, Szeged 6726, Hungary; cNational Agricultural Research and Innovation Centre, Agricultural Biotechnology Institute, Gödöllo} 2100, Hungary; dBoyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853; and eU.S. Department of Agriculture–Agricultural Research Service Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, NY 14853 Contributed by Éva Kondorosi, February 14, 2017 (sent for review January 17, 2017; reviewed by Rebecca Dickstein and Julia Frugoli) Legumes engage in root nodule symbioses with nitrogen-fixing effectors or microbe-associated molecular patterns (MAMPs) soil bacteria known as rhizobia. In nodule cells, bacteria are enclosed such as surface polysaccharides to facilitate their invasion of the in membrane-bound vesicles called symbiosomes and differentiate host (7, 8). Therefore, effector- or MAMP-triggered plant im- into bacteroids that are capable of converting atmospheric nitrogen munity mediated by intracellular nucleotide binding/leucine-rich into ammonia. Bacteroid differentiation -
Natural Endophytic Association Between Rhizobium Etli and Maize (Zea Mays L.)
Journal of Biotechnology 91 (2001) 117–126 www.elsevier.com/locate/jbiotec Natural endophytic association between Rhizobium etli and maize (Zea mays L.) M.L. Gutie´rrez-Zamora, E. Martı´nez-Romero * Centro de In6estigacio´n sobre Fijacio´n de Nitro´geno, UNAM. Ap.P. 565A, 62251 Cuerna6aca, Mexico Received 19 September 2000; received in revised form 16 January 2001; accepted 2 February 2001 Abstract Maize (Zea mays) and bean (Phaseolus 6ulgaris) have been traditionally grown in association for thousands of years in Mesoamerica. From surface sterilized maize roots, we have isolated over 60 Rhizobium strains that correspond to Rhizobium etli bv. phaseoli (the main symbiont of bean) on the basis of 16S rRNA gene restriction patterns, metabolic enzyme electropherotypes, organization of nif genes, and the ability to nodulate beans. The colonization capacity of some of the isolates was tested with an unimproved maize cultivar and with 30 maize land races. Increases in plant dry weight upon R. etli inoculation were recorded with some of the land races, and these increases may be related to plant growth promotion effects. Additionally, from within maize grown in monoculture we have also recovered R. etli isolates recognizable by their 16S rRNA gene types, which lack nif genes and are incapable of nodulating bean. These strains are presumed to correspond to the earlier described non-symbiotic R. etli obtained from bean rhizosphere. © 2001 Elsevier Science B.V. All rights reserved. Keywords: Rhizobium; Endophytes; Maize; Land races; Nitrogen fixation 1. Introduction 1998; James, 2000). In both sugar cane and rice, bacterial nitrogen fixation can contribute a sub- Cereals such as maize have high N fertilization stantial proportion of N to the plant (App et al., requirements for optimal yield. -
Oberholzeria (Fabaceae Subfam. Faboideae), a New Monotypic Legume Genus from Namibia
RESEARCH ARTICLE Oberholzeria (Fabaceae subfam. Faboideae), a New Monotypic Legume Genus from Namibia Wessel Swanepoel1,2*, M. Marianne le Roux3¤, Martin F. Wojciechowski4, Abraham E. van Wyk2 1 Independent Researcher, Windhoek, Namibia, 2 H. G. W. J. Schweickerdt Herbarium, Department of Plant Science, University of Pretoria, Pretoria, South Africa, 3 Department of Botany and Plant Biotechnology, University of Johannesburg, Johannesburg, South Africa, 4 School of Life Sciences, Arizona a11111 State University, Tempe, Arizona, United States of America ¤ Current address: South African National Biodiversity Institute, Pretoria, South Africa * [email protected] Abstract OPEN ACCESS Oberholzeria etendekaensis, a succulent biennial or short-lived perennial shrublet is de- Citation: Swanepoel W, le Roux MM, Wojciechowski scribed as a new species, and a new monotypic genus. Discovered in 2012, it is a rare spe- MF, van Wyk AE (2015) Oberholzeria (Fabaceae subfam. Faboideae), a New Monotypic Legume cies known only from a single locality in the Kaokoveld Centre of Plant Endemism, north- Genus from Namibia. PLoS ONE 10(3): e0122080. western Namibia. Phylogenetic analyses of molecular sequence data from the plastid matK doi:10.1371/journal.pone.0122080 gene resolves Oberholzeria as the sister group to the Genisteae clade while data from the Academic Editor: Maharaj K Pandit, University of nuclear rDNA ITS region showed that it is sister to a clade comprising both the Crotalarieae Delhi, INDIA and Genisteae clades. Morphological characters diagnostic of the new genus include: 1) Received: October 3, 2014 succulent stems with woody remains; 2) pinnately trifoliolate, fleshy leaves; 3) monadel- Accepted: February 2, 2015 phous stamens in a sheath that is fused above; 4) dimorphic anthers with five long, basifixed anthers alternating with five short, dorsifixed anthers, and 5) pendent, membranous, one- Published: March 27, 2015 seeded, laterally flattened, slightly inflated but indehiscent fruits. -
Rhizobium,, Agrobacterium Agrobacterium
Systems Microbiology Wednes Nov 1 - Brock Ch 17, 586-591 Ch 19, 656-66 Ch 31, 989-991 •• TheThe GlobalGlobal NitrogenNitrogen CycleCycle •• NN2 fixationfixation -- generalgeneral considerationsconsiderations •• PlantPlant microbialmicrobial symbiosessymbioses RhizobiumRhizobium,, AgrobacteriumAgrobacterium Table and diagram of the key processes and prokaryotes in the nitrogen cycle removed due to copyright restrictions. See Figure 19-28 in Madigan, Michael, and John Martinko. Brock Biology of Microorganisms. 11th ed. Upper Saddle River, NJ: Pearson PrenticeHall, 2006. ISBN: 0131443291. Nitrification Chemolithoautotrophs (aerobic) • Ammonia Oxidizers (Nitrosomonas, Nitrosococcus) • Nitrite Oxidizers (Nitrobacter, Nitrococcus) • Slow growing (less free energy available) • Enzyme ammonia monooxygenase - NO - NO - NH4 NO2 2 3 AO NO e- e- CO2 CH2O CO2 CH2O O2 H20 O2 H20 NH + Cation exchange capacity: 4 the ability of a soil to hold on to cations + NH + soil NH4 4 particle Microbial nitrification can effect + NH4 the retention of nitrogen in soil - NO3 - NO3 - NO3 - NO3 - NO - NO - NH4 NO2 2 3 AO NO e- e- CO2 CH2O CO2 CH2O O2 H20 O2 H20 NITROGEN CYCLING IN AQUARIA Image of fish swimming in an aquarium removed due to copyright restrictions. http://www.hubbardbrook.org/research/ gallery/powerpoint/Slide2.jpg ViewView from aboveabove Lake Lake 226 226 divider divider curtain curtain in Augustin August 1973. 1973. The bright green colour results from Cyanobacteria, which are growing on phosphorus added to the near side of the curtain. What happen’s when you dump lots of phosphate in a lake ??? Aerial view of Lake 227 in 1994. Note the bright green color caused by algae stimulated by the experimental addition of phosphorus for the 26th consecutive year. -
Defining the Rhizobium Leguminosarum Species Complex
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 12 December 2020 doi:10.20944/preprints202012.0297.v1 Article Defining the Rhizobium leguminosarum species complex J. Peter W. Young 1,*, Sara Moeskjær 2, Alexey Afonin 3, Praveen Rahi 4, Marta Maluk 5, Euan K. James 5, Maria Izabel A. Cavassim 6, M. Harun-or Rashid 7, Aregu Amsalu Aserse 8, Benjamin J. Perry 9, En Tao Wang 10, Encarna Velázquez 11, Evgeny E. Andronov 12, Anastasia Tampakaki 13, José David Flores Félix 14, Raúl Rivas González 11, Sameh H. Youseif 15, Marc Lepetit 16, Stéphane Boivin 16, Beatriz Jorrin 17, Gregory J. Kenicer 18, Álvaro Peix 19, Michael F. Hynes 20, Martha Helena Ramírez-Bahena 21, Arvind Gulati 22 and Chang-Fu Tian 23 1 Department of Biology, University of York, York YO10 5DD, UK 2 Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark; [email protected] 3 Laboratory for genetics of plant-microbe interactions, ARRIAM, Pushkin, 196608 Saint-Petersburg, Russia; [email protected] 4 National Centre for Microbial Resource, National Centre for Cell Science, Pune, India; [email protected] 5 Ecological Sciences, The James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK; [email protected] (M.M.); [email protected] (E.K.J.) 6 Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA; [email protected] 7 Biotechnology Division, Bangladesh Institute of Nuclear Agriculture (BINA), Bangladesh; [email protected] 8 Ecosystems and Environment Research programme , Faculty of Biological and Environmental Sciences, University of Helsinki, FI-00014 Finland; [email protected] 9 Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand; [email protected] 10 Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Cd. -
Specificity in Legume-Rhizobia Symbioses
International Journal of Molecular Sciences Review Specificity in Legume-Rhizobia Symbioses Mitchell Andrews * and Morag E. Andrews Faculty of Agriculture and Life Sciences, Lincoln University, PO Box 84, Lincoln 7647, New Zealand; [email protected] * Correspondence: [email protected]; Tel.: +64-3-423-0692 Academic Editors: Peter M. Gresshoff and Brett Ferguson Received: 12 February 2017; Accepted: 21 March 2017; Published: 26 March 2017 Abstract: Most species in the Leguminosae (legume family) can fix atmospheric nitrogen (N2) via symbiotic bacteria (rhizobia) in root nodules. Here, the literature on legume-rhizobia symbioses in field soils was reviewed and genotypically characterised rhizobia related to the taxonomy of the legumes from which they were isolated. The Leguminosae was divided into three sub-families, the Caesalpinioideae, Mimosoideae and Papilionoideae. Bradyrhizobium spp. were the exclusive rhizobial symbionts of species in the Caesalpinioideae, but data are limited. Generally, a range of rhizobia genera nodulated legume species across the two Mimosoideae tribes Ingeae and Mimoseae, but Mimosa spp. show specificity towards Burkholderia in central and southern Brazil, Rhizobium/Ensifer in central Mexico and Cupriavidus in southern Uruguay. These specific symbioses are likely to be at least in part related to the relative occurrence of the potential symbionts in soils of the different regions. Generally, Papilionoideae species were promiscuous in relation to rhizobial symbionts, but specificity for rhizobial genus appears to hold at the tribe level for the Fabeae (Rhizobium), the genus level for Cytisus (Bradyrhizobium), Lupinus (Bradyrhizobium) and the New Zealand native Sophora spp. (Mesorhizobium) and species level for Cicer arietinum (Mesorhizobium), Listia bainesii (Methylobacterium) and Listia angolensis (Microvirga). -
Interaction of Biochar Type and Rhizobia Inoculation Increases the Growth and Biological Nitrogen Fixation of Robinia Pseudoacacia Seedlings
Article Interaction of Biochar Type and Rhizobia Inoculation Increases the Growth and Biological Nitrogen Fixation of Robinia pseudoacacia Seedlings Qiaoyu Sun 1, Yong Liu 2, Hongbin Liu 1 and R. Kasten Dumroese 3,* 1 Key Laboratory of Non-Point Source Pollution Control, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 Zhongguancun South Street, Haidian District, Beijing 10081, China; [email protected] (Q.S.); [email protected] (H.L.) 2 Key Laboratory for Silviculture and Conservation, Ministry of Education, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing 100083, China; [email protected] 3 US Department of Agriculture, Forest Service, Rocky Mountain Research Station, 1221 South Main Street, Moscow, ID 83843, USA * Correspondence: [email protected]; Tel.: +1-208-883-2324; Fax: +1-208-882-3915 Received: 29 May 2020; Accepted: 23 June 2020; Published: 26 June 2020 Abstract: Adding biochar to soil can change soil properties and subsequently affect plant growth, but this effect can vary because of different feedstocks and methods (e.g., pyrolysis or gasification) used to create the biochar. Growth and biological nitrogen fixation (BNF) of leguminous plants can be improved with rhizobia inoculation that fosters nodule development. Thus, this factorial greenhouse study examined the effects of two types of biochar (i.e., pyrolysis and gasification) added at a rate of 5% (v:v) to a peat-based growth substrate and rhizobia inoculation (yes or no) on 15 15 Robinia pseudoacacia (black locust) seedlings supplied with NH4 NO3. Seedling and nodule growth, nitrogen (N) content, and δ15N 1000 were evaluated after 3 months. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Number 3, Spring 1998 Director’S Letter
Planning and planting for a better world Friends of the JC Raulston Arboretum Newsletter Number 3, Spring 1998 Director’s Letter Spring greetings from the JC Raulston Arboretum! This garden- ing season is in full swing, and the Arboretum is the place to be. Emergence is the word! Flowers and foliage are emerging every- where. We had a magnificent late winter and early spring. The Cornus mas ‘Spring Glow’ located in the paradise garden was exquisite this year. The bright yellow flowers are bright and persistent, and the Students from a Wake Tech Community College Photography Class find exfoliating bark and attractive habit plenty to photograph on a February day in the Arboretum. make it a winner. It’s no wonder that JC was so excited about this done soon. Make sure you check of themselves than is expected to seedling selection from the field out many of the special gardens in keep things moving forward. I, for nursery. We are looking to propa- the Arboretum. Our volunteer one, am thankful for each and every gate numerous plants this spring in curators are busy planting and one of them. hopes of getting it into the trade. preparing those gardens for The magnolias were looking another season. Many thanks to all Lastly, when you visit the garden I fantastic until we had three days in our volunteers who work so very would challenge you to find the a row of temperatures in the low hard in the garden. It shows! Euscaphis japonicus. We had a twenties. There was plenty of Another reminder — from April to beautiful seven-foot specimen tree damage to open flowers, but the October, on Sunday’s at 2:00 p.m. -
Morristown Street Tree Resource Booklet
Morristown Street Tree Resource Booklet June 2020 I. Large Shade Trees for Areas Larger than 4’ x 6’ 3 Black Tupelo (Nyssa sylcatica) 4 Dawn Redwood (Metasequoia glyptostroboides) 5 Elm (Ulmus spp.) 6 Gingko (Gingko biloba) 7 Hardy Rubber Tree (Eucommia ulmoides) 8 Honey Locust (Gleditsia triacanthos inermis) 9 Katsura Tree (Cercidphyllum japonicum) 10 Kentucky Coffee Tree (Gymnocladus dioicus) 11 Linden (Tilia spp) 12 Little Leaf Linden (Tilia cordata) 13 Silver Linden (Tilia tomentosa) 14 Crimean Linden (Tilia x euchlora) 15 London Plane Tree (Platanus x acerfolia) 16 Maple, Red (Acer rubrum) 17 Maple, Sugar ( Acer saccharum) 18 Oak, Pin (Quercus palustris) 19 Oak, Red (Quercus rubra) 20 Oak, Shingle (Quercus imbricaria) 21 Oak, White (Quercus alba) 22 Oak, Willow (Quercus phellos) 23 Pagoda Tree (Styphnolobium japanicum) 24 Sweetgum (Liquidambur styraciflua) 25 Japanese Zelkova (Zelkova serrata) 26 II. Understory Small and Medium Trees for Areas Larger than 2’ x 6’ 27 American Yellowwood (Cladrastis kentukea) 28 Amur Maackia (Maackia amurensis) 29 Cherry (Prunus spp) 30 Crabapple (Malus spp) 31 Dogwood (Cornus spp) 32 Eastern Rudbud (Cercis canadensis) 33 Golden Raintree (Koelreuteria paniculata) 34 Hackberry (Celtis occidentalis) 35 Hawthorne (Crataegus spp) 36 Hop Hornbeam (Ostrya virginiana) 37 Japanese Snowball (Styrax japonicas) 38 Maple Amur (Acer ginnala ‘Flame’) 39 Maple, Hedge (Acer campestre) 40 Purpleleaf Plum (Prunus cerasifera) 41 Callery Pear (Pyrus calleryanan’) 42 I. Large Shade Trees for Areas Larger than 4’ x 6’ Black Tupelo (Nyssa sylcatica) Form: Pyramidal in youth with horizontal branches forming, and rounded or irregular crown. Mature Height: 30’ to 50’ Mature Spread: 20’ to 30’ Use: Acceptable street tree. -
Molecular Biology in the Improvement of Biological Nitrogen Fixation by Rhizobia and Extending the Scope to Cereals
microorganisms Review Molecular Biology in the Improvement of Biological Nitrogen Fixation by Rhizobia and Extending the Scope to Cereals Ravinder K. Goyal 1,* , Maria Augusta Schmidt 1,2 and Michael F. Hynes 2 1 Lacombe Research and Development Centre, Agriculture and Agri-Food Canada, Lacombe, AB T4L 1W1, Canada; [email protected] 2 Department of Biological Sciences, University of Calgary, 2500 University Dr NW, Calgary, AB T2N 1N4, Canada; [email protected] * Correspondence: [email protected] Abstract: The contribution of biological nitrogen fixation to the total N requirement of food and feed crops diminished in importance with the advent of synthetic N fertilizers, which fueled the “green revolution”. Despite being environmentally unfriendly, the synthetic versions gained prominence primarily due to their low cost, and the fact that most important staple crops never evolved symbiotic associations with bacteria. In the recent past, advances in our knowledge of symbiosis and nitrogen fixation and the development and application of recombinant DNA technology have created oppor- tunities that could help increase the share of symbiotically-driven nitrogen in global consumption. With the availability of molecular biology tools, rapid improvements in symbiotic characteristics of rhizobial strains became possible. Further, the technology allowed probing the possibility of establishing a symbiotic dialogue between rhizobia and cereals. Because the evolutionary process did not forge a symbiotic relationship with the latter, the potential of molecular manipulations has been tested to incorporate a functional mechanism of nitrogen reduction independent of microbes. In this review, we discuss various strategies applied to improve rhizobial strains for higher nitrogen fixation efficiency, more competitiveness and enhanced fitness under unfavorable environments. -
Working with Rhizobia J.G
Working with rhizobia J.G. Howieson and M.J. Dilworth (Eds.) Working with rhizobia J.G. Howieson and M.J. Dilworth (Eds.) Centre for Rhizobium Studies Murdoch University 2016 The Australian Centre for International Agricultural Research (ACIAR) was established in June 1982 by an Act of the Australian Parliament. ACIAR operates as part of Australia’s international development cooperation program, with a mission to achieve more productive and sustainable agricultural systems, for the benefit of developing countries and Australia. It commissions collaborative research between Australian and developing- country researchers in areas where Australia has special research competence. It also administers Australia’s contribution to the International Agricultural Research Centres. Where trade names are used this constitutes neither endorsement of nor discrimination against any product by ACIAR. ACIAR MONOGRAPH SERIES This series contains the results of original research supported by ACIAR, or material deemed relevant to ACIAR’s research and development objectives. The series is distributed internationally, with an emphasis on developing countries. © Australian Centre for International Agricultural Research (ACIAR) 2016 This work is copyright. Apart from any use as permitted under the Copyright Act 1968, no part may be reproduced by any process without prior written permission from ACIAR, GPO Box 1571, Canberra ACT 2601, Australia, [email protected]. Howieson J.G. and Dilworth M.J. (Eds.). 2016. Working with rhizobia. Australian Centre for International