Ocrdroid: a Framework to Digitize Text Using Mobile Phones
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An End-To-End System for Automatic Characterization of Iba1 Immunopositive Microglia in Whole Slide Imaging
Neuroinformatics (2019) 17:373–389 https://doi.org/10.1007/s12021-018-9405-x ORIGINAL ARTICLE An End-to-end System for Automatic Characterization of Iba1 Immunopositive Microglia in Whole Slide Imaging Alexander D. Kyriazis1 · Shahriar Noroozizadeh1 · Amir Refaee1 · Woongcheol Choi1 · Lap-Tak Chu1 · Asma Bashir2 · Wai Hang Cheng2 · Rachel Zhao2 · Dhananjay R. Namjoshi2 · Septimiu E. Salcudean3 · Cheryl L. Wellington2 · Guy Nir4 Published online: 8 November 2018 © Springer Science+Business Media, LLC, part of Springer Nature 2018 Abstract Traumatic brain injury (TBI) is one of the leading causes of death and disability worldwide. Detailed studies of the microglial response after TBI require high throughput quantification of changes in microglial count and morphology in histological sections throughout the brain. In this paper, we present a fully automated end-to-end system that is capable of assessing microglial activation in white matter regions on whole slide images of Iba1 stained sections. Our approach involves the division of the full brain slides into smaller image patches that are subsequently automatically classified into white and grey matter sections. On the patches classified as white matter, we jointly apply functional minimization methods and deep learning classification to identify Iba1-immunopositive microglia. Detected cells are then automatically traced to preserve their complex branching structure after which fractal analysis is applied to determine the activation states of the cells. The resulting system detects white matter regions with 84% accuracy, detects microglia with a performance level of 0.70 (F1 score, the harmonic mean of precision and sensitivity) and performs binary microglia morphology classification with a 70% accuracy. -
Advanced OCR with Omnipage and Finereader
AAddvvHighaa Technn Centerccee Trainingdd UnitOO CCRR 21050 McClellan Rd. Cupertino, CA 95014 www.htctu.net Foothill – De Anza Community College District California Community Colleges Advanced OCR with OmniPage and FineReader 10:00 A.M. Introductions and Expectations FineReader in Kurzweil Basic differences: cost Abbyy $300, OmniPage Pro $150/Pro Office $600; automating; crashing; graphic vs. text 10:30 A.M. OCR program: Abbyy FineReader www.abbyy.com Looking at options Working with TIFF files Opening the file Zoom window Running OCR layout preview modifying spell check looks for barcodes Blocks Block types Adding to blocks Subtracting from blocks Reordering blocks Customize toolbars Adding reordering shortcut to the tool bar Save and load blocks Eraser Saving Types of documents Save to file Formats settings Optional hyphen in Word remove optional hyphen (Tools > Format Settings) Tables manipulating Languages Training 11:45 A.M. Lunch 1:00 P.M. OCR program: ScanSoft OmniPage www.scansoft.com Looking at options Languages Working with TIFF files SET Tools (see handout) www.htctu.net rev. 9/27/2011 Opening the file View toolbar with shortcut keys (View > Toolbar) Running OCR On-the-fly zoning modifying spell check Zone type Resizing zones Reordering zones Enlargement tool Ungroup Templates Saving Save individual pages Save all files in one document One image, one document Training Format types Use true page for PDF, not Word Use flowing page or retain fronts and paragraphs for Word Optional hyphen in Word Tables manipulating Scheduler/Batch manager: Workflow Speech Saving speech files (WAV) Creating a Workflow 2:30 P.M. Break 2:45 P.M. -
OCR Pwds and Assistive Qatari Using OCR Issue No
Arabic Optical State of the Smart Character Art in Arabic Apps for Recognition OCR PWDs and Assistive Qatari using OCR Issue no. 15 Technology Research Nafath Efforts Page 04 Page 07 Page 27 Machine Learning, Deep Learning and OCR Revitalizing Technology Arabic Optical Character Recognition (OCR) Technology at Qatar National Library Overview of Arabic OCR and Related Applications www.mada.org.qa Nafath About AboutIssue 15 Content Mada Nafath3 Page Nafath aims to be a key information 04 Arabic Optical Character resource for disseminating the facts about Recognition and Assistive Mada Center is a private institution for public benefit, which latest trends and innovation in the field of Technology was founded in 2010 as an initiative that aims at promoting ICT Accessibility. It is published in English digital inclusion and building a technology-based community and Arabic languages on a quarterly basis 07 State of the Art in Arabic OCR that meets the needs of persons with functional limitations and intends to be a window of information Qatari Research Efforts (PFLs) – persons with disabilities (PWDs) and the elderly in to the world, highlighting the pioneering Qatar. Mada today is the world’s Center of Excellence in digital work done in our field to meet the growing access in Arabic. Overview of Arabic demands of ICT Accessibility and Assistive 11 OCR and Related Through strategic partnerships, the center works to Technology products and services in Qatar Applications enable the education, culture and community sectors and the Arab region. through ICT to achieve an inclusive community and educational system. The Center achieves its goals 14 Examples of Optical by building partners’ capabilities and supporting the Character Recognition Tools development and accreditation of digital platforms in accordance with international standards of digital access. -
Reconocimiento De Escritura Lecture 4/5 --- Layout Analysis
Reconocimiento de Escritura Lecture 4/5 | Layout Analysis Daniel Keysers Jan/Feb-2008 Keysers: RES-08 1 Jan/Feb-2008 Outline Detection of Geometric Primitives The Hough-Transform RAST Document Layout Analysis Introduction Algorithms for Layout Analysis A `New' Algorithm: Whitespace Cuts Evaluation of Layout Analyis Statistical Layout Analysis OCR OCR - Introduction OCR fonts Tesseract Sources of OCR Errors Keysers: RES-08 2 Jan/Feb-2008 Outline Detection of Geometric Primitives The Hough-Transform RAST Document Layout Analysis Introduction Algorithms for Layout Analysis A `New' Algorithm: Whitespace Cuts Evaluation of Layout Analyis Statistical Layout Analysis OCR OCR - Introduction OCR fonts Tesseract Sources of OCR Errors Keysers: RES-08 3 Jan/Feb-2008 Detection of Geometric Primitives some geometric entities important for DIA: I text lines I whitespace rectangles (background in documents) Keysers: RES-08 4 Jan/Feb-2008 Outline Detection of Geometric Primitives The Hough-Transform RAST Document Layout Analysis Introduction Algorithms for Layout Analysis A `New' Algorithm: Whitespace Cuts Evaluation of Layout Analyis Statistical Layout Analysis OCR OCR - Introduction OCR fonts Tesseract Sources of OCR Errors Keysers: RES-08 5 Jan/Feb-2008 Hough-Transform for Line Detection Assume we are given a set of points (xn; yn) in the image plane. For all points on a line we must have yn = a0 + a1xn If we want to determine the line, each point implies a constraint yn 1 a1 = − a0 xn xn Keysers: RES-08 6 Jan/Feb-2008 Hough-Transform for Line Detection The space spanned by the model parameters a0 and a1 is called model space, parameter space, or Hough space. -
ABBYY Finereader Engine OCR
ABBYY FineReader Engine Performance Guide Integrating optical character recognition (OCR) technology will effectively extend the functionality of your application. Excellent performance of the OCR component is one of the key factors for high customer satisfaction. This document provides information on general OCR performance factors and the possibilities to optimize them in the Software Development Kit ABBYY FineReader Engine. By utilizing its advanced capabilities and options, the high OCR performance can be improved even further for optimal customer experience. When measuring OCR performance, there are two major parameters to consider: RECOGNITION ACCURACY PROCESSING SPEED Which Factors Influence the OCR Accuracy and Processing Speed? Image type and Image image source quality OCR accuracy and Processing System settings processing resources speed Document Application languages architecture Recognition speed and recognition accuracy can be significantly improved by using the right parameters in ABBYY FineReader Engine. Image Type and Image Quality Images can come from different sources. Digitally created PDFs, screenshots of computer and tablet devices, image Key factor files created by scanners, fax servers, digital cameras Image for OCR or smartphones – various image sources will lead to quality = different image types with different level of image quality. performance For example, using the wrong scanner settings can cause “noise” on the image, like random black dots or speckles, blurred and uneven letters, or skewed lines and shifted On the other hand, processing ‘high-quality images’ with- table borders. In terms of OCR, this is a ‘low-quality out distortions reduces the processing time. Additionally, image’. reading high-quality images leads to higher accuracy results. Processing low-quality images requires high computing power, increases the overall processing time and deterio- Therefore, it is recommended to use high-quality images rates the recognition results. -
Master Thesis
Master thesis To obtain a Master of Science Degree in Informatics and Communication Systems from the Merseburg University of Applied Sciences Subject: Tunisian truck license plate recognition using an Android Application based on Machine Learning as a detection tool Author: Supervisor: Achraf Boussaada Prof.Dr.-Ing. Rüdiger Klein Matr.-Nr.: 23542 Prof.Dr. Uwe Schröter Table of contents Chapter 1: Introduction ................................................................................................................................. 1 1.1 General Introduction: ................................................................................................................................... 1 1.2 Problem formulation: ................................................................................................................................... 1 1.3 Objective of Study: ........................................................................................................................................ 4 Chapter 2: Analysis ........................................................................................................................................ 4 2.1 Methodological approaches: ........................................................................................................................ 4 2.1.1 Actual approach: ................................................................................................................................... 4 2.1.2 Image Processing with OCR: ................................................................................................................ -
An Accuracy Examination of OCR Tools
International Journal of Innovative Technology and Exploring Engineering (IJITEE) ISSN: 2278-3075, Volume-8, Issue-9S4, July 2019 An Accuracy Examination of OCR Tools Jayesh Majumdar, Richa Gupta texts, pen computing, developing technologies for assisting Abstract—In this research paper, the authors have aimed to do a the visually impaired, making electronic images searchable comparative study of optical character recognition using of hard copies, defeating or evaluating the robustness of different open source OCR tools. Optical character recognition CAPTCHA. (OCR) method has been used in extracting the text from images. OCR has various applications which include extracting text from any document or image or involves just for reading and processing the text available in digital form. The accuracy of OCR can be dependent on text segmentation and pre-processing algorithms. Sometimes it is difficult to retrieve text from the image because of different size, style, orientation, a complex background of image etc. From vehicle number plate the authors tried to extract vehicle number by using various OCR tools like Tesseract, GOCR, Ocrad and Tensor flow. The authors in this research paper have tried to diagnose the best possible method for optical character recognition and have provided with a comparative analysis of their accuracy. Keywords— OCR tools; Orcad; GOCR; Tensorflow; Tesseract; I. INTRODUCTION Optical character recognition is a method with which text in images of handwritten documents, scripts, passport documents, invoices, vehicle number plate, bank statements, Fig.1: Functioning of OCR [2] computerized receipts, business cards, mail, printouts of static-data, any appropriate documentation or any II. OCR PROCDURE AND PROCESSING computerized receipts, business cards, mail, printouts of To improve the probability of successful processing of an static-data, any appropriate documentation or any picture image, the input image is often ‘pre-processed’; it may be with text in it gets processed and the text in the picture is de-skewed or despeckled. -
Text Classification and Layout Analysis for Document Reassembling
Text Classification and Layout Analysis for Document Reassembling DISSERTATION submitted in partial fulfillment of the requirements for the degree of Doktor der technischen Wissenschaften by Markus Diem Registration Number 0226595 to the Faculty of Informatics at the Vienna University of Technology Advisor: Ao.Univ.Prof. Dipl.-Ing. Dr.techn. Robert Sablatnig The dissertation has been reviewed by: (Ao.Univ.Prof. Dipl.-Ing. (Basilis G. Gatos, PhD) Dr.techn. Robert Sablatnig) Wien, March 10, 2014 (Markus Diem) Technische Universit¨atWien A-1040 Wien Karlsplatz 13 Tel. +43-1-58801-0 www.tuwien.ac.at Erkl¨arung zur Verfassung der Arbeit Markus Diem Mollardgasse 22/19, 1060 Wien Hiermit erkl¨are ich, dass ich diese Arbeit selbst¨andig verfasst habe, dass ich die ver- wendeten Quellen und Hilfsmittel vollst¨andig angegeben habe und dass ich die Stellen der Arbeit { einschließlich Tabellen, Karten und Abbildungen {, die anderen Werken oder dem Internet im Wortlaut oder dem Sinn nach entnommen sind, auf jeden Fall unter Angabe der Quelle als Entlehnung kenntlich gemacht habe. (Ort, Datum) (Unterschrift Verfasser) i Danksagung Ich m¨ochte mich an dieser Stelle bei all jenen Menschen bedanken, die mich begleitet und unterst¨utzthaben. Sie haben wesentlich dazu beigetragen, dass ich diese Arbeit schreiben konnte. F¨urdie fachliche Unterst¨utzungm¨ochte ich mich bei allen Arbeitskollegen am Cvl bedanken, die in vielen Diskussionen meine Idee der Computer Vision geformt haben. Speziell m¨ochte ich mich bei Melanie Gau, Michael H¨odlmoser,Martin Kampel, Rainer Planinc, Michael Reiter, Sebastian Zambanini und Andreas Zweng bedanken. Ein Dank gilt auch Stefan, der mich nie zu seiner Masterparty eingeladen hat, Florian, dessen zum Teil absurde Ideen den B¨uroalltagauffrischen und Fabian, der mich schon beim Studium f¨urseine nicht immer absurden Ideen begeisterte. -
Enforcing Abstract Immutability
Enforcing Abstract Immutability by Jonathan Eyolfson A thesis presented to the University of Waterloo in fulfillment of the thesis requirement for the degree of Doctor of Philosophy in Electrical and Computer Engineering Waterloo, Ontario, Canada, 2018 © Jonathan Eyolfson 2018 Examining Committee Membership The following served on the Examining Committee for this thesis. The decision of the Examining Committee is by majority vote. External Examiner Ana Milanova Associate Professor Rensselaer Polytechnic Institute Supervisor Patrick Lam Associate Professor University of Waterloo Internal Member Lin Tan Associate Professor University of Waterloo Internal Member Werner Dietl Assistant Professor University of Waterloo Internal-external Member Gregor Richards Assistant Professor University of Waterloo ii I hereby declare that I am the sole author of this thesis. This is a true copy of the thesis, including any required final revisions, as accepted by my examiners. I understand that my thesis may be made electronically available to the public. iii Abstract Researchers have recently proposed a number of systems for expressing, verifying, and inferring immutability declarations. These systems are often rigid, and do not support “abstract immutability”. An abstractly immutable object is an object o which is immutable from the point of view of any external methods. The C++ programming language is not rigid—it allows developers to express intent by adding immutability declarations to methods. Abstract immutability allows for performance improvements such as caching, even in the presence of writes to object fields. This dissertation presents a system to enforce abstract immutability. First, we explore abstract immutability in real-world systems. We found that developers often incorrectly use abstract immutability, perhaps because no programming language helps developers correctly implement abstract immutability. -
Comparison of Visual and Logical Character Segmentation in Tesseract OCR Language Data for Indic Writing Scripts
Comparison of Visual and Logical Character Segmentation in Tesseract OCR Language Data for Indic Writing Scripts Jennifer Biggs National Security & Intelligence, Surveillance & Reconnaissance Division Defence Science and Technology Group Edinburgh, South Australia {[email protected]} interfaces, online services, training and training Abstract data preparation, and additional language data. Originally developed for recognition of Eng- Language data for the Tesseract OCR lish text, Smith (2007), Smith et al (2009) and system currently supports recognition of Smith (2014) provide overviews of the Tesseract a number of languages written in Indic system during the process of development and writing scripts. An initial study is de- internationalization. Currently, Tesseract v3.02 scribed to create comparable data for release, v3.03 candidate release and v3.04 devel- Tesseract training and evaluation based opment versions are available, and the tesseract- on two approaches to character segmen- ocr project supports recognition of over 60 lan- tation of Indic scripts; logical vs. visual. guages. Results indicate further investigation of Languages that use Indic scripts are found visual based character segmentation lan- throughout South Asia, Southeast Asia, and parts guage data for Tesseract may be warrant- of Central and East Asia. Indic scripts descend ed. from the Brāhmī script of ancient India, and are broadly divided into North and South. With some 1 Introduction exceptions, South Indic scripts are very rounded, while North Indic scripts are less rounded. North The Tesseract Optical Character Recognition Indic scripts typically incorporate a horizontal (OCR) engine originally developed by Hewlett- bar grouping letters. Packard between 1984 and 1994 was one of the This paper describes an initial study investi- top 3 engines in the 1995 UNLV Accuracy test gating alternate approaches to segmenting char- as “HP Labs OCR” (Rice et al 1995). -
Ocr: a Statistical Model of Multi-Engine Ocr Systems
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2004 Ocr: A Statistical Model Of Multi-engine Ocr Systems Mercedes Terre McDonald University of Central Florida Part of the Electrical and Computer Engineering Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Masters Thesis (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation McDonald, Mercedes Terre, "Ocr: A Statistical Model Of Multi-engine Ocr Systems" (2004). Electronic Theses and Dissertations, 2004-2019. 38. https://stars.library.ucf.edu/etd/38 OCR: A STATISTICAL MODEL OF MULTI-ENGINE OCR SYSTEMS by MERCEDES TERRE ROGERS B.S. University of Central Florida, 2000 A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in the Department of Electrical and Computer Engineering in the College of Engineering and Computer Science at the University of Central Florida Orlando, Florida Summer Term 2004 ABSTRACT This thesis is a benchmark performed on three commercial Optical Character Recognition (OCR) engines. The purpose of this benchmark is to characterize the performance of the OCR engines with emphasis on the correlation of errors between each engine. The benchmarks are performed for the evaluation of the effect of a multi-OCR system employing a voting scheme to increase overall recognition accuracy. This is desirable since currently OCR systems are still unable to recognize characters with 100% accuracy. -
Design a Fast 3D Scanner Using a Laser Line
REPUBLIC OF TURKEY FIRAT UNIVERSITY GRADUATE SCHOOL OF NATURAL AND APPLIED SCIENCE AN ANDROID BASED RECEIPT TRACKER SYSTEM USING OPTICAL CHARACTER RECOGNITION KAREZ ABDULWAHHAB HAMAD Master Thesis Department: Software Engineering Supervisor: Asst. Prof. Dr. Mehmet KAYA JULY – 2017 ACKNOWLEDGEMENTS First, thanks to ALLAH, the Almighty, for granting me the well and strength, with which this master thesis was accomplished; it will be the first step to propose much more great scientific researches. I would like to acknowledge my thankfulness and appreciation to my supervisor Asst. Prof. Dr. Mehmet KAYA for his guidance, assistance encouragement, wisdom suggestions, and valuable advice that made the completion of the present master thesis possible. Last but not the least; I want to express my special thankfulness to my lovely parents, and special gratitude to all members of my family and friends. Special thanks to my lovely uncle Assoc. Prof. Dr. Yadgar Rasool, who helped me and encouraged me a lot during my study. II TABLE OF CONTENTS Page No ACKNOWLEDGEMENTS ............................................................................................... II TABLE OF CONTENTS ................................................................................................. III ABSTRACT ....................................................................................................................... VI ÖZET ................................................................................................................................ VII