Kirschsteiniothelia, a New Genus for the Microthelia Incrustans-Group (Dothideales)
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Taxaarea Relationship and Neutral Dynamics Influence the Diversity Of
bs_bs_banner Environmental Microbiology (2012) 14(6), 1488–1499 doi:10.1111/j.1462-2920.2012.02737.x Taxa–area relationship and neutral dynamics influence the diversity of fungal communities on senesced tree leavesemi_2737 1488..1499 Larry M. Feinstein* and Christopher B. Blackwood to environmental changes may be enhanced with Department of Biological Sciences, Kent State increased understanding of the processes that regulate University, Kent, Ohio, USA fungal distributions. Variation in composition of ecological communities is commonly divided into two components: alpha diversity (number and evenness of taxa within a Summary sampling unit) and beta diversity (taxa turnover among This study utilized individual senesced sugar maple areas) (Gaston and Blackburn, 2000). and beech leaves as natural sampling units within For macroorganisms, it has been frequently observed which to quantify saprotrophic fungal diversity. Quan- that there is a correlation between the size of habitat tifying communities in individual leaves allowed us to patches or survey areas and the most fundamental determine if fungi display a classic taxa–area relation- measure of alpha diversity, number of taxa detected ship (species richness increasing with area). We (Rosenzweig, 1995; Connor and McCoy, 2001; Lomolino, found a significant taxa–area relationship for sugar 2001; Drakare et al., 2006). The ‘taxa–area relationship’ maple leaves, but not beech leaves, consistent with (TAR) refers to the shape of the increase in number of Wright’s species-energy theory. This suggests that taxa with increasing area, and has been most often mod- energy availability as affected plant biochemistry is a elled as a power law (S = cAz) where S is number of key factor regulating the scaling relationships of species, A is area, c is the intercept in log-log space, and fungal diversity. -
Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Pacific Northwest Fungi
North American Fungi Volume 8, Number 10, Pages 1-13 Published June 19, 2013 Vialaea insculpta revisited R.A. Shoemaker, S. Hambleton, M. Liu Biodiversity (Mycology and Botany) / Biodiversité (Mycologie et Botanique) Agriculture and Agri-Food Canada / Agriculture et Agroalimentaire Canada 960 Carling Avenue / 960, avenue Carling, Ottawa, Ontario K1A 0C6 Canada Shoemaker, R.A., S. Hambleton, and M. Liu. 2013. Vialaea insculpta revisited. North American Fungi 8(10): 1-13. doi: http://dx.doi: 10.2509/naf2013.008.010 Corresponding author: R.A. Shoemaker: [email protected]. Accepted for publication May 23, 2013 http://pnwfungi.org Copyright © Her Majesty the Queen in Right of Canada, as represented by the Minister of Agriculture and Agri-Food Canada Abstract: Vialaea insculpta, occurring on Ilex aquifolium, is illustrated and redescribed from nature and pure culture to assess morphological features used in its classification and to report new molecular studies of the Vialaeaceae and its ordinal disposition. Tests of the germination of the distinctive ascospores in water containing parts of Ilex flowers after seven days resulted in the production of appressoria without mycelium. Phylogenetic analyses based on a fragment of ribosomal RNA gene small subunit suggest that the taxon belongs in Xylariales. Key words: Valsaceae and Vialaeaceae, (Diaporthales), Diatrypaceae (Diatrypales), Amphisphaeriaceae and Hyphonectriaceae (Xylariales), Ilex, endophyte. 2 Shoemaker et al. Vialaea inscupta. North American Fungi 8(10): 1-13 Introduction: Vialaea insculpta (Fr.) Sacc. is on oatmeal agar at 20°C exposed to daylight. a distinctive species occurring on branches of Isolation attempts from several other collections Ilex aquifolium L. Oudemans (1871, tab. -
Xylariales, Ascomycota), Designation of an Epitype for the Type Species of Iodosphaeria, I
VOLUME 8 DECEMBER 2021 Fungal Systematics and Evolution PAGES 49–64 doi.org/10.3114/fuse.2021.08.05 Phylogenetic placement of Iodosphaeriaceae (Xylariales, Ascomycota), designation of an epitype for the type species of Iodosphaeria, I. phyllophila, and description of I. foliicola sp. nov. A.N. Miller1*, M. Réblová2 1Illinois Natural History Survey, University of Illinois Urbana-Champaign, Champaign, IL, USA 2Czech Academy of Sciences, Institute of Botany, 252 43 Průhonice, Czech Republic *Corresponding author: [email protected] Key words: Abstract: The Iodosphaeriaceae is represented by the single genus, Iodosphaeria, which is composed of nine species with 1 new taxon superficial, black, globose ascomata covered with long, flexuous, brown hairs projecting from the ascomata in a stellate epitypification fashion, unitunicate asci with an amyloid apical ring or ring lacking and ellipsoidal, ellipsoidal-fusiform or allantoid, hyaline, phylogeny aseptate ascospores. Members of Iodosphaeria are infrequently found worldwide as saprobes on various hosts and a wide systematics range of substrates. Only three species have been sequenced and included in phylogenetic analyses, but the type species, taxonomy I. phyllophila, lacks sequence data. In order to stabilize the placement of the genus and family, an epitype for the type species was designated after obtaining ITS sequence data and conducting maximum likelihood and Bayesian phylogenetic analyses. Iodosphaeria foliicola occurring on overwintered Alnus sp. leaves is described as new. Five species in the genus form a well-supported monophyletic group, sister to thePseudosporidesmiaceae in the Xylariales. Selenosporella-like and/or ceratosporium-like synasexual morphs were experimentally verified or found associated with ascomata of seven of the nine accepted species in the genus. -
<I>Seimatosporium</I>, and Introduction Of
Persoonia 26, 2011: 85–98 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE doi:10.3767/003158511X576666 Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova K. Tanaka1, M. Endo1, K. Hirayama1, I. Okane2, T. Hosoya3, T. Sato4 Key words Abstract Discosia (teleomorph unknown) and Seimatosporium (teleomorph Discostroma) are saprobic or plant pathogenic, coelomycetous genera of so-called ‘pestalotioid fungi’ within the Amphisphaeriaceae (Xylariales). Amphisphaeriaceae They share several morphological features and their generic circumscriptions appear unclear. We investigated the anamorph phylogenies of both genera on the basis of SSU, LSU and ITS nrDNA and -tubulin gene sequences. Discosia was coelomycetes β not monophyletic and was separated into two distinct lineages. Discosia eucalypti deviated from Discosia clade and Discostroma was transferred to a new genus, Immersidiscosia, characterised by deeply immersed, pycnidioid conidiomata that pestalotioid fungi are intraepidermal to subepidermal in origin, with a conidiomatal beak having periphyses. Subdividing Discosia into Xylariales ‘sections’ was not considered phylogenetically significant at least for the three sections investigated (sect. Discosia, Laurina, and Strobilina). We recognised Seimatosporium s.l. as a monophyletic genus. An undescribed species belonging to Discosia with its associated teleomorph was collected on living leaves of Symplocos prunifolia from Yakushima Island, Japan. We have therefore established a new teleomorphic genus, Adisciso, for this new spe- cies, A. yakushimense. Discostroma tricellulare (anamorph: Seimatosporium azaleae), previously described from Rhododendron species, was transferred to Adisciso based on morphological and phylogenetic grounds. Adisciso is characterised by relatively small-sized ascomata without stromatic tissue, obclavate to broadly cylindrical asci with biseriate ascospores that have 2 transverse septa, and its Discosia anamorph. -
MICROBIAL FUNCTIONAL ACTIVITY and DIVERSITY PATTERNS at MULTIPLE SPATIAL SCALES a Dissertation Submitted to Kent State Universit
MICROBIAL FUNCTIONAL ACTIVITY AND DIVERSITY PATTERNS AT MULTIPLE SPATIAL SCALES A Dissertation submitted to Kent State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy by Larry M. Feinstein August, 2012 Dissertation written by Larry M. Feinstein B.S., Wright State University, 1999 Ph.D., Kent State University, 2012 Approved by , Chair, Doctoral Dissertation Committee Christopher B. Blackwood , Members, Doctoral Dissertation Committee Laura G. Leff Mark W. Kershner Gwenn L. Volkert Accepted by , Chair, Department of Biological Sciences James L. Blank , Dean, College of Arts and Science John R. D. Stalvey ii TABLE OF CONTENTS LIST OF FIGURES……………………………………………...............……………….iv LIST OF TABLES...............................................................................................................x ACKNOWLEDGMENTS................................................................................................xiii 5 CHAPTER 1. Introduction……………….........……………………………………...……..…....1 References..................................................................................................11 2. Assessment of Bias Associated with Incomplete Extraction of Microbial DNA from Soil.........................................................................………………..……….18 10 Abstract.......…….………………………………………………..….…...18 Introduction............…………………………………..……………..……19 Methods......……………………………………………………….…...…21 Results...............................................................................................….....27 -
Palm Leaf Fungi in Portugal: Ecological, Morphological and Phylogenetic Approaches
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA VEGETAL Palm leaf fungi in Portugal: ecological, morphological and phylogenetic approaches Diogo Rafael Santos Pereira Mestrado em Microbiologia Aplicada Dissertação orientada por: Alan John Lander Phillips Rogério Paulo de Andrade Tenreiro 2019 This Dissertation was fully performed at Lab Bugworkers | M&B-BioISI, Biosystems & Integrative Sciences Institute, under the direct supervision of Principal Investigator Alan John Lander Phillips Professor Rogério Paulo de Andrade Tenreiro was the internal supervisor designated in the scope of the Master in Applied Microbiology of the Faculty of Sciences of the University of Lisbon To my grandpa, our little old man Acknowledgments This dissertation would not have been possible without the support and commitment of all the people (direct or indirectly) involved and to whom I sincerely thank. Firstly, I would like to express my deepest appreciation to my supervisor, Professor Alan Phillips, for all his dedication, motivation and enthusiasm throughout this long year. I am grateful for always push me to my limits, squeeze the best from my interest in Mycology and letting me explore a new world of concepts and ideas. Your expertise, attentiveness and endless patience pushed me to be a better investigator, and hopefully a better mycologist. You made my MSc dissertation year be beyond better than everything I would expect it to be. Most of all, I want to thank you for believing in me as someone who would be able to achieve certain goals, even when I doubt it, and for guiding me towards them. Thank you for always teaching me, above all, to make the right question with the care and accuracy that Mycology demands, which is probably the most important lesson I have acquired from this dissertation year. -
Acrocordiella Yunnanensis Sp. Nov. (Requienellaceae, Xylariales) from Yunnan, China
Phytotaxa 487 (2): 103–113 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2021 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.487.2.1 Acrocordiella yunnanensis sp. nov. (Requienellaceae, Xylariales) from Yunnan, China LAKMALI S. DISSANAYAKE1,5, SAJEEWA S.N. MAHARACHCHIKUMBURA2,6, PETER E. MORTIMER3,7, KEVIN D. HYDE4,8 & JI-CHUAN KANG1,9* 1 Engineering and Research Center for Southwest Bio-Pharmaceutical Resources of National Education Ministry of China, Guizhou University, Guiyang 550025, China. 2 School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, China. 3 CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China. 4 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand. 5 [email protected]; https://orcid.org/0000-0003-2933-3127 6 [email protected]; https://orcid.org/0000-0001-9127-0783 7 [email protected]; https://orcid.org/0000-0003-3188-9327 8 [email protected]; https://orcid.org/0000-0002-2191-0762 9 [email protected]; https://orcid.org/0000-0002-6294-5793 *Corresponding author: [email protected] Abstract Acrocordiella yunnanensis sp. nov. is introduced here from dead twigs of an unidentified dicotyledonous host from Xishuangbanna Prefecture, Yunnan Province, China. Phylogenetic analyses based on LSU and ITS sequence data revealed that this new species with a distinct sexual morph belongs to Requienellaceae (Sordariomycetes, Ascomycota). Acrocordiella yunnanensis is closely related to Acrocordiella omanensis in Requienellaceae. -
Do Xylariaceous Macromycetes Make up Most of the Xylariomycetidae?
Mycosphere 7 (5): 582–601 (2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/7/5/5 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Essays 13 – Do xylariaceous macromycetes make up most of the Xylariomycetidae? Daranagama DA1,2, Jones EBG3, Liu XZ1, To-anun C3*, Stadler M1,4 and Hyde KD2 1 State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No 31 st West Beichen Road, Chaoyang District, Beijing, 100101, People’s Republic of China. 2 Centre of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand. 3 Division of Plant Pathology, Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand. 4 Helmholtz-Zentrum für Infektionsforschung GmbH, Dept. Microbial Drugs, Inhoffenstrasse 7, 38124, Braunschweig, Germany. Daranagama DA, Jones EBG, Liu XZ, To-anun C, Stadler M, Hyde KD. 2016 – Mycosphere Essays 13 – Do xylariaceous macromycetes make up most of the Xylariomycetidae? Mycosphere 7(5), 582–601, Doi 10.5943/mycosphere/7/5/5 Abstract In this essay, we focus on the micro-xylariaceous genera (with inconspicuous ascomata and asexual morphs) in the Xylariomycetidae, with special emphasis on Xylariaceae. Are micro- xylariaceous less diverse than macro-xylariaceous genera (with conspicuous stromata) genera? This paper also reviews their taxonomic significance and current systematic relationship and evaluates different characters used in their taxonomic placement. So far, only a few micro-xylariaceous taxa have been studied in detail in comparison with the stromatic macroscopic xylariaceous taxa and the reasons for this are discussed. It is hoped that further sampling and study of different substrata and habitats, with greater emphasis on sequence data, may lead to the discovery of many more micro- xylariaceous genera. -
Taxonomy, Molecular Phylogeny and Taxol Production in Selected Genera of Endophytic Fungi by Jeerapun Worapong a Dissertation Su
Taxonomy, molecular phylogeny and taxol production in selected genera of endophytic fungi by Jeerapun Worapong A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Plant Pathology Montana State University © Copyright by Jeerapun Worapong (2001) Abstract: This study examined the taxonomy, molecular phytogeny, and taxol production in selected genera of endophytic fungi associated with tropical and temperate plants. These common anamorphic endophytes are Pestalotiopsis, Pestalotia, Monochaetia, Seiridium, and Truncatella, forming appendaged conidia in acervuli. Sexual states of these fungi, including Amphisphaeria, Pestalosphaeria, Discostroma and Lepteutypa, are in a little known family Amphisphaeriaceae, an uncertain order of Xylariales or Amphisphaeriales (Pyrenomycetes, Ascomycota). The classification of the anamorph is based primarily on conidial morphology i.e. the number of cells, and appendage type. However, UV irradiation can convert typical conidia of Pestalotiopsis microspora (5 celled, 2-3 apical and 1 basal appendage) into fungal biotypes that bear a conidial resemblance to the genera Monochaetia and Truncatella. The single cell cultures of putants retain 100% homologies to 5.8S and ITS regions of DNA in the wild type, suggesting that no UV induced mutation occurred in these regions. These results call to question the stability of conidial morphology and taxonomic reliance on this characteristic for this group of fungi. Therefore, a molecular phylogenetic approach was used to clarify their taxonomic relationships. Teleomorphs of these endophytes were previously placed in either Xylariales or Amphisphaeriales. Based on parsimony analysis of partial 18S rDNA sequences for selected anamorphic and teleomorphic taxa in Amphisphaeriaceae, this research supports the placement of these fungal genera in the order Xylariales sharing a common ancestor with some taxa in Xylariaceae. -
Forty Pyrenomycetous Fungi Belonging to Class Sordariomycetes New To
Forty pyrenomycetous fungi belonging to Class Sordariomycetes new to Norway Björn Nordén1, Thomas Læssøe2, John Bjarne Jordal3, Jens H Petersen4, Hermann Voglmayr5, Walter Jaklitsch6 1Norwegian Institute for Nature Research (NINA), Gaustadalleen 21, NO-0349 Oslo, Norway 2Department of Biology/Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, 2100, Copenhagen Ø, Denmark 3Auragata 3, 6600 Sunndalsøra, Norway 4Nøruplundvej 2, Tirstrup. DK-8400 Ebeltoft, Denmark 5Division of Systematic and Evolutionary Botany, Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, A-1030 Vienna, Austria. 6Institute of Forest Entomology, Forest Pathology and Forest Protection (IFFF), Department of Forest- and Soil Sciences, University of Natural Resources and Life Sciences, Hasenauerstraße 38, A-1190 Vienna, Austria Corresponding author: [email protected] arter som vokser på bark, lav, moser, møkk og sopp er også inkludert. Norsk tittel: 40 kjernesopper nye for Norge ABSTRACT Nordén B, Læssøe T, Jordal JB, Petersen JH, Forty species of ascomycetes belonging to Voglmayr H, Jaklitsch W, 2015. Forty pyreno- class Sordariomycetes are presented as new mycetous fungi belonging to Class Sordario- to Norway. The species were collected in mycetes new to Norway. Agarica 2015 vol. temperate deciduous forest in South Norway 36: 43-54. as part of a project financed by the Norwegian Biodiversity Information Centre. The species KEYWORDS are mainly wood-inhabiting, but a few species Ascomycetes, wood-living fungi, bark-living on bark, bryophytes, fungi, lichens or dung fungi, pyrenomycetes are also included. NØKKELORD INTRODUCTION Sekksporesopp, vedboende sopp, barkboende Ascomycetes come in a bewildering array of sopp, pyrenomyceter shapes and forms, and in exceedingly great numbers.