Microfungal Diversity of Juncus Trifidus L. and Salix Herbacea L. at Isolated
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Identification and Nomenclature of the Genus Penicillium
Downloaded from orbit.dtu.dk on: Dec 20, 2017 Identification and nomenclature of the genus Penicillium Visagie, C.M.; Houbraken, J.; Frisvad, Jens Christian; Hong, S. B.; Klaassen, C.H.W.; Perrone, G.; Seifert, K.A.; Varga, J.; Yaguchi, T.; Samson, R.A. Published in: Studies in Mycology Link to article, DOI: 10.1016/j.simyco.2014.09.001 Publication date: 2014 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Visagie, C. M., Houbraken, J., Frisvad, J. C., Hong, S. B., Klaassen, C. H. W., Perrone, G., ... Samson, R. A. (2014). Identification and nomenclature of the genus Penicillium. Studies in Mycology, 78, 343-371. DOI: 10.1016/j.simyco.2014.09.001 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 78: 343–371. Identification and nomenclature of the genus Penicillium C.M. -
Identification and Nomenclature of the Genus Penicillium
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 78: 343–371. Identification and nomenclature of the genus Penicillium C.M. Visagie1, J. Houbraken1*, J.C. Frisvad2*, S.-B. Hong3, C.H.W. Klaassen4, G. Perrone5, K.A. Seifert6, J. Varga7, T. Yaguchi8, and R.A. Samson1 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, NL-3584 CT Utrecht, The Netherlands; 2Department of Systems Biology, Building 221, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark; 3Korean Agricultural Culture Collection, National Academy of Agricultural Science, RDA, Suwon, Korea; 4Medical Microbiology & Infectious Diseases, C70 Canisius Wilhelmina Hospital, 532 SZ Nijmegen, The Netherlands; 5Institute of Sciences of Food Production, National Research Council, Via Amendola 122/O, 70126 Bari, Italy; 6Biodiversity (Mycology), Agriculture and Agri-Food Canada, Ottawa, ON K1A0C6, Canada; 7Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6726 Szeged, Közep fasor 52, Hungary; 8Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba 260-8673, Japan *Correspondence: J. Houbraken, [email protected]; J.C. Frisvad, [email protected] Abstract: Penicillium is a diverse genus occurring worldwide and its species play important roles as decomposers of organic materials and cause destructive rots in the food industry where they produce a wide range of mycotoxins. Other species are considered enzyme factories or are common indoor air allergens. Although DNA sequences are essential for robust identification of Penicillium species, there is currently no comprehensive, verified reference database for the genus. To coincide with the move to one fungus one name in the International Code of Nomenclature for algae, fungi and plants, the generic concept of Penicillium was re-defined to accommodate species from other genera, such as Chromocleista, Eladia, Eupenicillium, Torulomyces and Thysanophora, which together comprise a large monophyletic clade. -
207-219 44(4) 01.홍승범R.Fm
한국균학회지 The Korean Journal of Mycology Review 일균일명 체계에 의한 국내 보고 Aspergillus, Penicillium, Talaromyces 속의 종 목록 정리 김현정 1† · 김정선 1† · 천규호 1 · 김대호 2 · 석순자 1 · 홍승범 1* 1국립농업과학원 농업미생물과 미생물은행(KACC), 2강원대학교 산림환경과학대학 산림환경보호학과 Species List of Aspergillus, Penicillium and Talaromyces in Korea, Based on ‘One Fungus One Name’ System 1† 1† 1 2 1 1 Hyeon-Jeong Kim , Jeong-Seon Kim , Kyu-Ho Cheon , Dae-Ho Kim , Soon-Ja Seok and Seung-Beom Hong * 1 Korean Agricultural Culture Collection, Agricultural Microbiology Division National Institute of Agricultural Science, Wanju 55365, Korea 2 Tree Pathology and Mycology Laboratory, Department of Forestry and Environmental Systems, Kangwon National University, Chun- cheon 24341, Korea ABSTRACT : Aspergillus, Penicillium, and their teleomorphic genera have a worldwide distribution and large economic impacts on human life. The names of species in the genera that have been reported in Korea are listed in this study. Fourteen species of Aspergillus, 4 of Eurotium, 8 of Neosartorya, 47 of Penicillium, and 5 of Talaromyces were included in the National List of Species of Korea, Ascomycota in 2015. Based on the taxonomic system of single name nomenclature on ICN (International Code of Nomenclature for algae, fungi, and plants), Aspergillus and its teleomorphic genera such as Neosartorya, Eurotium, and Emericella were named as Aspergillus and Penicillium, and its teleomorphic genera such as Eupenicillium and Talaromyces were named as Penicillium (subgenera Aspergilloides, Furcatum, and Penicillium) and Talaromyces (subgenus Biverticillium) in this study. In total, 77 species were added and the revised list contains 55 spp. of Aspergillus, 82 of Penicillium, and 18 of Talaromyces. -
Phylogeny of Penicillium and the Segregation of Trichocomaceae Into Three Families
available online at www.studiesinmycology.org StudieS in Mycology 70: 1–51. 2011. doi:10.3114/sim.2011.70.01 Phylogeny of Penicillium and the segregation of Trichocomaceae into three families J. Houbraken1,2 and R.A. Samson1 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. *Correspondence: Jos Houbraken, [email protected] Abstract: Species of Trichocomaceae occur commonly and are important to both industry and medicine. They are associated with food spoilage and mycotoxin production and can occur in the indoor environment, causing health hazards by the formation of β-glucans, mycotoxins and surface proteins. Some species are opportunistic pathogens, while others are exploited in biotechnology for the production of enzymes, antibiotics and other products. Penicillium belongs phylogenetically to Trichocomaceae and more than 250 species are currently accepted in this genus. In this study, we investigated the relationship of Penicillium to other genera of Trichocomaceae and studied in detail the phylogeny of the genus itself. In order to study these relationships, partial RPB1, RPB2 (RNA polymerase II genes), Tsr1 (putative ribosome biogenesis protein) and Cct8 (putative chaperonin complex component TCP-1) gene sequences were obtained. The Trichocomaceae are divided in three separate families: Aspergillaceae, Thermoascaceae and Trichocomaceae. The Aspergillaceae are characterised by the formation flask-shaped or cylindrical phialides, asci produced inside cleistothecia or surrounded by Hülle cells and mainly ascospores with a furrow or slit, while the Trichocomaceae are defined by the formation of lanceolate phialides, asci borne within a tuft or layer of loose hyphae and ascospores lacking a slit. -
Diversity and Control of Spoilage Fungi in Dairy Products: an Update
microorganisms Review Diversity and Control of Spoilage Fungi in Dairy Products: An Update Lucille Garnier 1,2 ID , Florence Valence 2 and Jérôme Mounier 1,* 1 Laboratoire Universitaire de Biodiversité et Ecologie Microbienne (LUBEM EA3882), Université de Brest, Technopole Brest-Iroise, 29280 Plouzané, France; [email protected] 2 Science et Technologie du Lait et de l’Œuf (STLO), AgroCampus Ouest, INRA, 35000 Rennes, France; fl[email protected] * Correspondence: [email protected]; Tel.: +33-(0)2-90-91-51-00; Fax: +33-(0)2-90-91-51-01 Received: 10 July 2017; Accepted: 25 July 2017; Published: 28 July 2017 Abstract: Fungi are common contaminants of dairy products, which provide a favorable niche for their growth. They are responsible for visible or non-visible defects, such as off-odor and -flavor, and lead to significant food waste and losses as well as important economic losses. Control of fungal spoilage is a major concern for industrials and scientists that are looking for efficient solutions to prevent and/or limit fungal spoilage in dairy products. Several traditional methods also called traditional hurdle technologies are implemented and combined to prevent and control such contaminations. Prevention methods include good manufacturing and hygiene practices, air filtration, and decontamination systems, while control methods include inactivation treatments, temperature control, and modified atmosphere packaging. However, despite technology advances in existing preservation methods, fungal spoilage is still an issue for dairy manufacturers and in recent years, new (bio) preservation technologies are being developed such as the use of bioprotective cultures. This review summarizes our current knowledge on the diversity of spoilage fungi in dairy products and the traditional and (potentially) new hurdle technologies to control their occurrence in dairy foods. -
Identification and Nomenclature of the Genus Penicillium
Downloaded from orbit.dtu.dk on: Oct 03, 2021 Identification and nomenclature of the genus Penicillium Visagie, C.M.; Houbraken, J.; Frisvad, Jens Christian; Hong, S. B.; Klaassen, C.H.W.; Perrone, G.; Seifert, K.A.; Varga, J.; Yaguchi, T.; Samson, R.A. Published in: Studies in Mycology Link to article, DOI: 10.1016/j.simyco.2014.09.001 Publication date: 2014 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Visagie, C. M., Houbraken, J., Frisvad, J. C., Hong, S. B., Klaassen, C. H. W., Perrone, G., Seifert, K. A., Varga, J., Yaguchi, T., & Samson, R. A. (2014). Identification and nomenclature of the genus Penicillium. Studies in Mycology, 78, 343-371. https://doi.org/10.1016/j.simyco.2014.09.001 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 78: 343–371. -
Microfungal Diversity of Juncus Trifidus L. and Salix Herbacea L. at Isolated Locations in the Sudetes and Carpathian Mountains
Title: Microfungal diversity of Juncus trifidus L. and Salix herbacea L. at isolated locations in the Sudetes and Carpathian Mountains Author: Bryan Jacewski, Jacek Urbaniak, Paweł Kwiatkowski, Wojciech Pusz Citation style: Jacewski Bryan, Urbaniak Jacek, Kwiatkowski Paweł, Pusz Wojciech. (2019). Microfungal diversity of Juncus trifidus L. and Salix herbacea L. at isolated locations in the Sudetes and Carpathian Mountains. "Acta Mycologica" (Vol. 54, no. 1 (2019), s. 1-15), doi 10.5586/am.1118. Acta Mycologica DOI: 10.5586/am.1118 ORIGINAL RESEARCH PAPER Publication history Received: 2018-04-27 Accepted: 2018-11-20 Microfungal diversity of Juncus trifdus L. Published: 2019-06-25 and Salix herbacea L. at isolated locations in Handling editor Malgorzata Ruszkiewicz- Michalska, Institute for the Sudetes and Carpathian Mountains Agricultural and Forest Environment, Polish Academy of Sciences and Faculty of Biology Brayan Jacewski1*, Jacek Urbaniak1, Paweł Kwiatkowski2, Wojciech and Environmental Protection, 3 University of Łódź, Poland Pusz 1 Department of Botany and Plant Ecology, Wrocław University of Environmental and Life Authors’ contributions Sciences, pl. Grunwaldzki 24A, 50-363 Wrocław, Poland BJ, JU: research codesigning, 2 Department of Botany and Nature Protection, University of Silesia in Katowice, Jagiellońska 28, conducting experiments, 40-032 Katowice, Poland writing the manuscript; PK: 3 Department of Plant Protection, Wrocław University of Environmental and Life Sciences, pl. contributed to the collection of Grunwaldzki 24A, 50-363 Wrocław, Poland plant material; WP: contributed to the species determination * Corresponding author. Email: [email protected] Funding This work was founded by Abstract the Wrocław University of Environmental and Life Sciences During cold periods in the Pleistocene Epoch, many plants known as the “relict as part of individual research species” migrated and inhabited new areas. -
Diversity, Distribution, and Ecology of Fungi in the Seasonal Snow of Antarctica
microorganisms Article Diversity, Distribution, and Ecology of Fungi in the Seasonal Snow of Antarctica Graciéle C.A. de Menezes 1, Soraya S. Amorim 1,Vívian N. Gonçalves 1, Valéria M. Godinho 1, Jefferson C. Simões 2, Carlos A. Rosa 1 and Luiz H. Rosa 1,* 1 Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, Brazil; [email protected] (G.C.A.d.M.); [email protected] (S.S.A.); [email protected] (V.N.G.); [email protected] (V.M.G.); [email protected] (C.A.R.) 2 Centro Polar e Climático, Universidade Federal do Rio Grande do Sul, Porto Alegre 91201-970, Brazil; jeff[email protected] * Correspondence: [email protected]; Tel.: +55-31-3409-2749 Received: 13 September 2019; Accepted: 8 October 2019; Published: 12 October 2019 Abstract: We characterized the fungal community found in the winter seasonal snow of the Antarctic Peninsula. From the samples of snow, 234 fungal isolates were obtained and could be assigned to 51 taxa of 26 genera. Eleven yeast species displayed the highest densities; among them, Phenoliferia glacialis showed a broad distribution and was detected at all sites that were sampled. Fungi known to be opportunistic in humans were subjected to antifungal minimal inhibition concentration. Debaryomyces hansenii, Rhodotorula mucilaginosa, Penicillium chrysogenum, Penicillium sp. 3, and Penicillium sp. 4 displayed resistance against the antifungals benomyl and fluconazole. Among them, R. mucilaginosa isolates were able to grow at 37 ◦C. Our results show that the winter seasonal snow of the Antarctic Peninsula contains a diverse fungal community dominated by cosmopolitan ubiquitous fungal species previously found in tropical, temperate, and polar ecosystems. -
Redalyc.DIVERSITY of SAPROTROPHIC ANAMORPHIC
Darwiniana ISSN: 0011-6793 [email protected] Instituto de Botánica Darwinion Argentina Allegrucci, Natalia; Cabello, Marta N.; Arambarri, Angélica M. DIVERSITY OF SAPROTROPHIC ANAMORPHIC ASCOMYCETES FROM NATIVE FORESTS IN ARGENTINA: AN UPDATED REVIEW Darwiniana, vol. 47, núm. 1, 2009, pp. 108-124 Instituto de Botánica Darwinion Buenos Aires, Argentina Available in: http://www.redalyc.org/articulo.oa?id=66912085007 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative DARWINIANA 47(1): 108-124. 2009 ISSN 0011-6793 DIVERSITY OF SAPROTROPHIC ANAMORPHIC ASCOMYCETES FROM NATIVE FORESTS IN ARGENTINA: AN UPDATED REVIEW Natalia Allegrucci, Marta N. Cabello & Angélica M. Arambarri Instituto de Botánica Spegazzini, Facultad de Ciencias Naturales y Museo, Universidad Nacional de La Plata, 1900 La Plata, Provincia de Buenos Aires, Argentina; [email protected] (author for correspondence). Abstract. Allegrucci, N.; M. N. Cabello & A. M. Arambarri. 2009. Diversity of Saprotrophic Anamorphic Ascomy- cetes from native forests in Argentina: an updated review. Darwiniana 47(1): 108-124. Eight regions of native forests have been recognized in Argentina: Chaco forest, Misiones rain forest, Tucumán-Bolivia forest (Yunga), Andean-Patagonian forest, “Monte”, “Espinal”, fluvial forests of the Paraguay, Paraná and Uruguay rivers, and “Talares” in the Pampean region. We reviewed the available data concerning biodiversity of saprotrophic micro-fungi (anamorphic Ascomycota) in those native forests from Argentina, from the earliest collections, done by Spegazzini, to present. Among the above mentioned regions most studies on saprotrophic micro-fungi concentrates on the Andean-Pata- gonian forest, the fluvial forests of the Paraguay, Paraná and Uruguay rivers and the “Talares”, in the Pampean region. -
Aspergillus, Penicillium and Related Species Reported from Turkey
Mycotaxon Vol. 89, No: 1, pp. 155-157, January-March, 2004. Links: Journal home : http://www.mycotaxon.com Abstract : http://www.mycotaxon.com/vol/abstracts/89/89-155.html Full text : http://www.mycotaxon.com/resources/checklists/asan-v89-checklist.pdf Aspergillus, Penicillium and Related Species Reported from Turkey Ahmet ASAN e-mail 1 (Official) : [email protected] e-mail 2 : [email protected] Tel. : +90 284 2352824-ext 1219 Fax : +90 284 2354010 Address: Prof. Dr. Ahmet ASAN. Trakya University, Faculty of Science -Fen Fakultesi-, Department of Biology, Balkan Yerleskesi, TR-22030 EDIRNE–TURKEY Web Page of Author : <http://personel.trakya.edu.tr/ahasan#.UwoFK-OSxCs> Citation of this work as proposed by Editors of Mycotaxon in the year of 2004: Asan A. Aspergillus, Penicillium and related species reported from Turkey. Mycotaxon 89 (1): 155-157, 2004. Link: <http://www.mycotaxon.com/resources/checklists/asan-v89-checklist.pdf> This internet site was last updated on February 10, 2015 and contains the following: 1. Background information including an abstract 2. A summary table of substrates/habitats from which the genera have been isolated 3. A list of reported species, substrates/habitats from which they were isolated and citations 4. Literature Cited 5. Four photographs about Aspergillus and Penicillium spp. Abstract This database, available online, reviews 876 published accounts and presents a list of species representing the genera Aspergillus, Penicillium and related species in Turkey. Aspergillus niger, A. fumigatus, A. flavus, A. versicolor and Penicillium chrysogenum are the most common species in Turkey, respectively. According to the published records, 428 species have been recorded from various subtrates/habitats in Turkey. -
Pathogenicity and Host Specificity of Penicillium Spp. on Pome and Citrus Fruit
Pathogenicity and Host Specificity of Penicillium spp. on Pome and Citrus Fruit By JOHANNES PETRUS LOUW Submitted in partial fulfilment of the requirements for the degree MAGISTER SCIENTIAE AGRICULTURAE (PLANT PATHOLOGY) In the Faculty of Natural and Agricultural Sciences University of Pretoria Pretoria 24 March 2014 Supervisor: Prof. Lise Korsten © University of Pretoria © University of Pretoria DECLARATION I, Johannes Petrus Louw, declare that the dissertation, which I hereby submit for the degree Magister Scientiae Agriculturae (Plant Pathology) at the University of Pretoria, is my own work and has not previously been submitted by me for a degree at this or any other tertiary institute. Johannes Petrus Louw March 2014 ii © University of Pretoria TABLE OF CONTENT PREFACE ................................................................................................................................ vi LIST OF TABLES ................................................................................................................ vi LIST OF FIGURES ............................................................................................................ viii ACKNOWLEDGEMENTS .................................................................................................. xi ABSTRACT ......................................................................................................................... xii CHAPTER 1: GENERAL INTRODUCTION ...................................................................... 1 REFERENCES ...................................................................................................................... -
Ui Thesis Kotun Mycotoxin 2017.Pdf
MYCOTOXIN PRODUCTION AND MOLECULAR CHARACTERISATION OF Penicillium SPECIES ISOLATED FROM MILLET GRAINS (Pennisetum glaucum) (L.) R. Br.) IN SOUTHWESTERN NIGERIA By BUNMI COMFORT KOTUN B.Sc. Microbiology (Unilag), M.Sc. Microbiology (Ibadan) A Thesis in the Department of Botany Submitted to the Faculty of Science in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY of the UNIVERSITY OF IBADAN January 2017 i ABSTRACT Millet, a widely consumed food crop, is subject to fungal contamination during storage. These fungi produce mycotoxins in stored food products. Mycotoxins such as citrinin and ochratoxin produced by Penicillium species have been reported to be injurious to consumers. Knowledge of the fungi involved in the production of these mycotoxins will help in the control of its spread in food products. However, there is dearth of information on the mycotoxins produced by Penicillium on millet grain and the species characterisation with molecular technique in Nigeria. Hence, this study was designed to investigate the distribution of Penicillium species and determine the presence of mycotoxins in the millet grains with molecular techniques. Samples of millet grains were purchased from three randomly selected markets each in Lagos, Ogun, Ondo, Oyo and Ekiti states all in southwestern Nigeria. One hundred grains from each of the millet samples were employed for isolation of fungi using Dichloran rose bengal chloramphenicol agar. Morphological identification of the fungal isolates was done using Pitt`s manual. The DNA of the Penicillium species were isolated using standard procedures. Similarities between species were determined by amplifying their internal transcribed spacer (ITS1, ITS4) region and partial beta tubulin gene (Bt2a, Bt2b).