Inheriting Genetic Conditions
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Case Study: Testing for Genetic Disorders
Case study: Testing for genetic disorders Purpose: A genetic disorder is a disorder that is caused by an abnormality (or several abnormalities) in a person’s genome. Genetic disorders are often hereditary, which means they are passed down to a child from its parents. The most common genetic disorder is familial hypercholesterolaemia (a genetic predisposition to high cholesterol levels), which is thought to affect 1 in 250 people in the UK. Other disorders, such as cystic fibrosis, are rarer although they can be relatively common in particular ethnic groups; for instance, the incidence of cystic fibrosis in Scotland is almost double the global average. Collectively genetic disorders affect lots of people because there are more than 10,000 different types worldwide. Genetic testing is used to inform people whether they have a disorder, or if there is a chance they might pass a disorder on to their children. Photo credit: jxfzsy/ iStockphoto Photo credit: monkeybusiness/ iStockphoto Approaches to identifying genetic disorders In the UK, if a person is concerned they might have, or might develop, a genetic disorder based on their family history, they can: Go to their GP, who might refer them for genetic testing. Patients usually provide a DNA sample, which is then analysed for a specific abnormality. Usually a single gene will be tested, but whole-genome sequencing approaches are being developed. The 100,000 Genomes Project, for example, aims to study whole-genome sequences from patients with cancer and rare disease Use a commercial genetic testing service. In this case, customers collect samples of their own DNA and send them away for analysis and interpretation Take no action. -
DOI: 10.4274/Jcrpe.Galenos.2021.2020.0175
DOI: 10.4274/jcrpe.galenos.2021.2020.0175 Case report A novel SCNN1A variation in a patient with autosomal-recessive pseudohypoaldosteronism type 1 Mohammed Ayed Huneif1*, Ziyad Hamad AlHazmy2, Anas M. Shoomi 3, Mohammed A. AlGhofely 3, Dr Humariya Heena 5, Aziza M. Mushiba 4, Abdulhamid AlSaheel3 1Pediatric Endocrinologist at Najran university hospital, Najran Saudi Arabia. 2 Pediatric Endocrinologist at Al yamammah hospital, , Riyadh, Saudi Arabia. 3 Pediatric Endocrinologist at Pediatric endocrine department,. Obesity, Endocrine, and Metabolism Center, , King Fahad Medical City, Riyadh, Saudi Arabia. 4Clinical Geneticist, Pediatric Subspecialties Department, Children's Specialized Hospital, King Fahad Medical City, Riyadh, Saudi Arabia. 5 Research Center, King Fahad Medical City, Riyadh , Saudi Arabia What is already known on this topic ? Autosomal-recessive pseudohypoaldosteronism type 1 (PHA1) is a rare genetic disorder caused by different variations in the ENaC subunit genes. Most of these variations appear in SCNN1A mainly in exon eight, which encodes for the alpha subunit of the epithelial sodium channel ENaC. Variations are nonsense, single-base deletions or insertions, or splice site variations, leading to mRNA and proteins of abnormal length. In addition, a few new missense variations have been reported. What this study adds ? We report a novel mutation [ c.729_730delAG (p.Val245Glyfs*65) ] in the exon 4 of the SCNN1A gene In case of autosomal recessive pseudohypoaldosteronism type 1. Patient with PHA1 requires early recognition, proper treatment, and close follow-up. Parents are advised to seek genetic counseling and plan future pregnancies. proof Abstract Pseudohypoaldosteronism type 1 (PHA1) is an autosomal-recessive disorder characterized by defective regulation of body sodium levels. -
The Effect of Reproductive Compensation on Recessive Disorders Within Consanguineous Human Populations
Heredity (2002) 88, 474–479 2002 Nature Publishing Group All rights reserved 0018-067X/02 $25.00 www.nature.com/hdy The effect of reproductive compensation on recessive disorders within consanguineous human populations ADJ Overall1,2, M Ahmad1 and RA Nichols1 1School of Biological Sciences, Queen Mary, University of London, UK We investigate the effects of consanguinity and population results show how reproductive compensation can effectively substructure on genetic health using the UK Asian popu- counteract the purging of deleterious alleles within con- lation as an example. We review and expand upon previous sanguineous populations. Whereas inbreeding does not treatments dealing with the deleterious effects of con- elevate the equilibrium frequency of affected individuals, sanguinity on recessive disorders and consider how other reproductive compensation does. We suggest this effect factors, such as population substructure, may be of equal must be built into interpretations of the incidence of genetic importance. For illustration, we quantify the relative risks of disease within populations such as the UK Asians. Infor- recessive lethal disorders by presenting some simple calcu- mation of this nature will benefit health care workers who lations that demonstrate the effect ‘reproductive compen- inform such communities. sation’ has on the maintenance of recessive alleles. The Heredity (2002) 88, 474–479. DOI: 10.1038/sj/hdy/6800090 Keywords: marriage; inbreeding; mortality; morbidity; genetic counselling Introduction whether reproductive compensation, at the level ident- ified by Koeslag and Schach (1984), can effectively The majority of the UK Asian population can trace their counteract the purging of deleterious alleles within con- origins to the Punjab region of India and Pakistan within sanguineous populations. -
(1908): Recent Studies in Human Heredity
NOTES AND LITERATURE HEREDITY Recent Studies in Human Heredity.-j\Iustthe fallacy always persist that all ancient and powerful families are necessarily degenerate? As long ago as 1881, Paul Jacoby wrote a book1 to prove that the assumptionof rank and power has always been followedby mentaland physicaldeteriorations ending in sterility and the extinctionof the race. By collectingtogether all evi- dence supportinghis preconceivedtheory, by tracing only the well-knownfamilies in whichpathological conditions were heredi- tary,by failing to treat of dozens of otherswhose recordswould not have supportedhis thesis,by saying everythinghe possibly could that was bad about everyone (followingalways the hostile historians), by ignoring everywherethe normal and virtuous members,he was able to presentwhat was to the uninformedan apparently overwhelmingarray of proof. In regard to the injustice of this one-sided picture I have already had some- thingto say in "M'Nlentaland M\IoralHeredity in Royalty, first publishedsome six years ago. A furtherstudy based upon Jacoby's unsound foundations has recentlycome to my notice,3and althougha well-miadebook containingan interestingseries of 278 portrait illustrations,is necessarilyquite as misleadingas the older structureon which it rests. The main idea of Dr. Galippe is to show that the great swollen protrudingunderlip which descended amionogthe Hiaps- burgs of Austria, Spain and allied houses,and also the protrud- ing underjaw (progil)athismine in e'rieuitr), are stigmata of de- generacy,and to demonstratethis he places beside his portraits, quotationsfrom the writingsof Jacoby. Galippe uses no statistical methods, not even arithmetical counting,and appears to be totally ignorant of English bio- metric writings. His general conclusionsabout the causes of degeneracy (aristocratic environment,etc.) are quite as mis- Etudes sur la selection chez I homem. -
Robertsonian Translocations FTNW
Robertsonian Translocations rarechromo.org Robertsonian translocations A Robertsonian translocation is an unusual type of chromosome rearrangement caused by two particular chromosomes joining together. Out of every 1,000 newborn babies, one has a Robertsonian translocation. The phrase Robertsonian translocation is too long for normal conversation and many people shorten it to rob . When the translocation is balanced , the person with it is called a Robertsonian translocation carrier . As carriers are healthy and have a normal lifespan, many never discover about their unusual chromosome rearrangement. In fact, the translocation can be passed down in families for many generations without anyone discovering. An unbalanced Robertsonian translocation may come to light after a baby is born with a chromosome disorder. Most babies with unbalanced Robertsonian translocations have parents with normal chromosomes. A minority of babies have one parent who is a Robertsonian translocation carrier. What are chromosomes? Chromosomes are the microscopically small structures in the nucleus of the body’s cells that carry genes. These genes are the instructions that tell our bodies how to develop and work properly. We have 46 chromosomes in all, 23 inherited from our father and 23 from our mother. Each chromosome has a short arm and a long arm. Five of the 23 chromosomes have a very small short arm that contains no unique genes; these are chromosome 13, 14, 15, 21 and 22. Technically, they are called acrocentric chromosomes. In a Robertsonian translocation, two of the five acrocentric chromosomes have . broken at the beginning of the short arm near the point where it meets the long arm. -
Sema4 Noninvasive Prenatal Select
Sema4 Noninvasive Prenatal Select Noninvasive prenatal testing with targeted genome counting 2 Autosomal trisomies 5 Trisomy 21 (Down syndrome) 6 Trisomy 18 (Edwards syndrome) 7 Trisomy 13 (Patau syndrome) 8 Trisomy 16 9 Trisomy 22 9 Trisomy 15 10 Sex chromosome aneuploidies 12 Monosomy X (Turner syndrome) 13 XXX (Trisomy X) 14 XXY (Klinefelter syndrome) 14 XYY 15 Microdeletions 17 22q11.2 deletion 18 1p36 deletion 20 4p16 deletion (Wolf-Hirschhorn syndrome) 20 5p15 deletion (Cri-du-chat syndrome) 22 15q11.2-q13 deletion (Angelman syndrome) 22 15q11.2-q13 deletion (Prader-Willi syndrome) 24 11q23 deletion (Jacobsen Syndrome) 25 8q24 deletion (Langer-Giedion syndrome) 26 Turnaround time 27 Specimen and shipping requirements 27 2 Noninvasive prenatal testing with targeted genome counting Sema4’s Noninvasive Prenatal Testing (NIPT)- Targeted Genome Counting analyzes genetic information of cell-free DNA (cfDNA) through a simple maternal blood draw to determine the risk for common aneuploidies, sex chromosomal abnormalities, and microdeletions, in addition to fetal gender, as early as nine weeks gestation. The test uses paired-end next-generation sequencing technology to provide higher depth across targeted regions. It also uses a laboratory-specific statistical model to help reduce false positive and false negative rates. The test can be offered to all women with singleton, twins and triplet pregnancies, including egg donor. The conditions offered are shown in below tables. For multiple gestation pregnancies, screening of three conditions -
Fragile X Syndrome
216 Current Genomics, 2011, 12, 216-224 Fragile X Syndrome Yingratana McLennan1, Jonathan Polussa1, Flora Tassone1,2 and Randi Hagerman*,1,3 1Medical Investigation of Neurodevelopmental Disorders (M.I.N.D.) Institute, University of California Davis Health System, Sacramento, California, USA 2Department of Biochemistry and Molecular Medicine, University of California Davis, School of Medicine, Davis, California, USA 3Department of Pediatrics, University of California Davis Health System, Sacramento, California, USA Abstract: Recent data from a national survey highlighted a significant difference in obesity rates in young fragile X males (31%) compared to age matched controls (18%). Fragile X syndrome (FXS) is the most common cause of intellectual disability in males and the most common single gene cause of autism. This X-linked disorder is caused by an expansion of a trinucleotide CGG repeat (>200) on the promotor region of the fragile X mental retardation 1 gene (FMR1). As a result, the promotor region often becomes methylated which leads to a deficiency or absence of the FMR1 protein (FMRP). Common characteristics of FXS include mild to severe cognitive impairments in males but less severe cognitive impairment in females. Physical features of FXS include an elongated face, prominent ears, and post-pubertal macroorchidism. Severe obesity in full mutation males is often associated with the Prader-Willi phenotype (PWP) which includes hyperphagia, lack of satiation after meals, and hypogonadism or delayed puberty; however, there is no deletion at 15q11-q13 nor uniparental maternal disomy. Herein, we discuss the molecular mechanisms leading to FXS and the Prader-Willi phenotype with an emphasis on mouse FMR1 knockout studies that have shown the reversal of weight increase through mGluR antagonists. -
Ancient Genomes Provide Insights Into Family Structure and the Heredity of Social Status in the Early Bronze Age of Southeastern Europe A
www.nature.com/scientificreports OPEN Ancient genomes provide insights into family structure and the heredity of social status in the early Bronze Age of southeastern Europe A. Žegarac1,2, L. Winkelbach2, J. Blöcher2, Y. Diekmann2, M. Krečković Gavrilović1, M. Porčić1, B. Stojković3, L. Milašinović4, M. Schreiber5, D. Wegmann6,7, K. R. Veeramah8, S. Stefanović1,9 & J. Burger2* Twenty-four palaeogenomes from Mokrin, a major Early Bronze Age necropolis in southeastern Europe, were sequenced to analyse kinship between individuals and to better understand prehistoric social organization. 15 investigated individuals were involved in genetic relationships of varying degrees. The Mokrin sample resembles a genetically unstructured population, suggesting that the community’s social hierarchies were not accompanied by strict marriage barriers. We fnd evidence for female exogamy but no indications for strict patrilocality. Individual status diferences at Mokrin, as indicated by grave goods, support the inference that females could inherit status, but could not transmit status to all their sons. We further show that sons had the possibility to acquire status during their lifetimes, but not necessarily to inherit it. Taken together, these fndings suggest that Southeastern Europe in the Early Bronze Age had a signifcantly diferent family and social structure than Late Neolithic and Early Bronze Age societies of Central Europe. Kinship studies in the reconstruction of prehistoric social structure. An understanding of the social organization of past societies is crucial to understanding recent human evolution, and several generations of archaeologists and anthropologists have worked to develop a suite of methods, both scientifc and conceptual, for detecting social conditions in the archaeological record 1–4. -
Restoration of Fertility by Gonadotropin Replacement in a Man With
J Rohayem and others Fertility in hypogonadotropic 170:4 K11–K17 Case Report CAH with TARTs Restoration of fertility by gonadotropin replacement in a man with hypogonadotropic azoospermia and testicular adrenal rest tumors due to untreated simple virilizing congenital adrenal hyperplasia Julia Rohayem1, Frank Tu¨ ttelmann2, Con Mallidis3, Eberhard Nieschlag1,4, Sabine Kliesch1 and Michael Zitzmann1 Correspondence should be addressed 1Center of Reproductive Medicine and Andrology, Clinical Andrology, University of Muenster, Albert-Schweitzer- to J Rohayem Campus 1, Building D11, D-48149 Muenster, Germany, 2Institute of Human Genetics and 3Institute of Reproductive Email and Regenerative Biology, Center of Reproductive Medicine and Andrology, University of Muenster, Muenster, Julia.Rohayem@ Germany and 4Center of Excellence in Genomic Medicine Research, King Abdulaziz University, Jeddah, Saudi Arabia ukmuenster.de Abstract Context: Classical congenital adrenal hyperplasia (CAH), a genetic disorder characterized by 21-hydroxylase deficiency, impairs male fertility, if insufficiently treated. Patient: A 30-year-old male was referred to our clinic for endocrine and fertility assessment after undergoing unilateral orchiectomy for a suspected testicular tumor. Histopathological evaluation of the removed testis revealed atrophy and testicular adrenal rest tumors (TARTs) and raised the suspicion of underlying CAH. The remaining testis was also atrophic (5 ml) with minor TARTs. Serum 17-hydroxyprogesterone levels were elevated, cortisol levels were at the lower limit of normal range, and gonadotropins at prepubertal levels, but serum testosterone levels were within the normal adult range. Semen analysis revealed azoospermia. CAH was confirmed by a homozygous mutation g.655A/COG (IVS2-13A/COG) in European Journal of Endocrinology CYP21A2. Hydrocortisone (24 mg/m2) administered to suppress ACTH and adrenal androgen overproduction unmasked deficient testicular testosterone production. -
A New Age in the Genetics of Deafness
, September/October 1999. Vol. 1 . No. 6 invited review/cme article A new age in the genetics of deafness Heidi L. Rehtu, MMSC' ot~dCytltllia C. Morton, PAD' Over the last several years, an understanding of the genetics SYNDROMIC AND NONSYNDROMIC DEAFNESS of hearing and deafness has grown exponentially. This progress , The prevalence of severe to profound bilateral congenital has been fueled by fast-paced developments in gene mapping hearing loss is estimated at 1 in 1000 births? When milder I and discovery, leading to the recent cloning and characteriza- forms of permanent hearing impairment at birth are included, tion of many genes critical in the biology of hearing. Among this estimate increases four-fold. Congenital deafness refers to the most significant advances, especially from a clinical per- deafness present at birth, though the cause of such hearing spective, is the discovery that up to 50% of nonsyndromic re- impairment may be genetic (hereditary) or environmental (ac- cessive deafness is caused by mutations in the GIB2 gene, which quired). Various studies estimate that approximately one-half encodes the connexin 26 protein (Cx26).I.' The clinical use of of the cases of congenital deafness are due to genetic factor^,^ screening for mutations in Cx26 and other genes involved in and these factors can be further subdivided by mode of inher- hearing impairment is still a new concept and not widely avail- itance. Approximately 77% of cases of hereditary deafness are able. However, the eventual availability of an array of genetic autosomal recessive, 22% are autosomal dominant, and 1% are tests is likely to have a major impact on the medical decisions X-linked.-l In addition, a small fraction of hereditary deafness made by hearing-impaired patients, their families, and their (< 1%) represents those families with mitochondria1 inheri- physicians. -
Waardenburg Syndrome: Case Series
International Journal of Otorhinolaryngology and Head and Neck Surgery Sachdeva S et al. Int J Otorhinolaryngol Head Neck Surg. 2021 Apr;7(4):668-671 http://www.ijorl.com pISSN 2454-5929 | eISSN 2454-5937 DOI: https://dx.doi.org/10.18203/issn.2454-5929.ijohns20211191 Case Series Waardenburg syndrome: case series Sheenu Sachdeva*, Varunkumar Jayakumar, Shubhlaxmi Atmaram Jaiswal Department of Otorhinolaryngology, Dr. V. M. G. M. C Solapur, Maharashtra, India Received: 13 January 2021 Revised: 16 February 2021 Accepted: 06 March 2021 *Correspondence: Dr. Sheenu Sachdeva, E-mail: [email protected] Copyright: © the author(s), publisher and licensee Medip Academy. This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. ABSTRACT Waardenburg syndrome is a rare genetic disorder of neural crest cell development with incidence of 1:42000 to 1:50,000. The syndrome is not completely expressed and hence adds to its hetergenecity with symptoms varying from one type of syndrome to another and from one patient to another. Unilateral heterochromia that manifests in some people is associated with Waardenburg syndrome and Parry-Romberg syndrome. This is a case series of four cases with features of Waardenburg syndrome with variable presentations and familial inheritance. Keywords: Autosomal dominant deafness, Heterochromia, Pigmentation anomalies, Waardenburg syndrome INTRODUCTION normal. Her mother also had similar hypertelorism with normal hearing (Figure 2). Also there is history suggestive Waardenburg syndrome (WS) is a rare genetic disorder of of premature graying of hair in her grandmother since the neural crest development characterized by varying degrees age of 15 years. -
Mosaic Genome-Wide Maternal Isodiploidy: an Extreme Form Of
Bens et al. Clinical Epigenetics (2017) 9:111 DOI 10.1186/s13148-017-0410-y RESEARCH Open Access Mosaic genome-wide maternal isodiploidy: an extreme form of imprinting disorder presenting as prenatal diagnostic challenge Susanne Bens1*, Manuel Luedeke1, Tanja Richter1, Melanie Graf1, Julia Kolarova1, Gotthold Barbi1, Krisztian Lato2, Thomas F. Barth3 and Reiner Siebert1 Abstract Background: Uniparental disomy of certain chromosomes are associated with a group of well-known genetic syndromes referred to as imprinting disorders. However, the extreme form of uniparental disomy affecting the whole genome is usually not compatible with life, with the exception of very rare cases of patients with mosaic genome-wide uniparental disomy reported in the literature. Results: We here report on a fetus with intrauterine growth retardation and malformations observed on prenatal ultrasound leading to invasive prenatal testing. By cytogenetic (conventional karyotyping), molecular cytogenetic (QF-PCR, FISH, array), and methylation (MS-MLPA) analyses of amniotic fluid, we detected mosaicism for one cell line with genome-wide maternal uniparental disomy and a second diploid cell line of biparental inheritance with trisomy X due to paternal isodisomy X. As expected for this constellation, we observed DNA methylation changes at all imprinted loci investigated. Conclusions: This report adds new information on phenotypic outcome of mosaic genome-wide maternal uniparental disomy leading to an extreme form of multilocus imprinting disturbance. Moreover, the findings highlight the technical challenges of detecting these rare chromosome disorders prenatally. Keywords: Genome-wide maternal uniparental disomy, Imprinting, Prenatal diagnostics, DNA methylation, Multilocus imprinting disturbances Background of isodisomy include unmasking of recessive diseases by Uniparental disomy (UPD) refers to the constellation of two transmitting two affected gene copies from one heterozy- identical (isodisomy) or homologous (heterodisomy) chro- gous parent carrier [2].