Fluorometric Assay for Alcohol Sulfotransferase
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Enzymatic Encoding Methods for Efficient Synthesis Of
(19) TZZ__T (11) EP 1 957 644 B1 (12) EUROPEAN PATENT SPECIFICATION (45) Date of publication and mention (51) Int Cl.: of the grant of the patent: C12N 15/10 (2006.01) C12Q 1/68 (2006.01) 01.12.2010 Bulletin 2010/48 C40B 40/06 (2006.01) C40B 50/06 (2006.01) (21) Application number: 06818144.5 (86) International application number: PCT/DK2006/000685 (22) Date of filing: 01.12.2006 (87) International publication number: WO 2007/062664 (07.06.2007 Gazette 2007/23) (54) ENZYMATIC ENCODING METHODS FOR EFFICIENT SYNTHESIS OF LARGE LIBRARIES ENZYMVERMITTELNDE KODIERUNGSMETHODEN FÜR EINE EFFIZIENTE SYNTHESE VON GROSSEN BIBLIOTHEKEN PROCEDES DE CODAGE ENZYMATIQUE DESTINES A LA SYNTHESE EFFICACE DE BIBLIOTHEQUES IMPORTANTES (84) Designated Contracting States: • GOLDBECH, Anne AT BE BG CH CY CZ DE DK EE ES FI FR GB GR DK-2200 Copenhagen N (DK) HU IE IS IT LI LT LU LV MC NL PL PT RO SE SI • DE LEON, Daen SK TR DK-2300 Copenhagen S (DK) Designated Extension States: • KALDOR, Ditte Kievsmose AL BA HR MK RS DK-2880 Bagsvaerd (DK) • SLØK, Frank Abilgaard (30) Priority: 01.12.2005 DK 200501704 DK-3450 Allerød (DK) 02.12.2005 US 741490 P • HUSEMOEN, Birgitte Nystrup DK-2500 Valby (DK) (43) Date of publication of application: • DOLBERG, Johannes 20.08.2008 Bulletin 2008/34 DK-1674 Copenhagen V (DK) • JENSEN, Kim Birkebæk (73) Proprietor: Nuevolution A/S DK-2610 Rødovre (DK) 2100 Copenhagen 0 (DK) • PETERSEN, Lene DK-2100 Copenhagen Ø (DK) (72) Inventors: • NØRREGAARD-MADSEN, Mads • FRANCH, Thomas DK-3460 Birkerød (DK) DK-3070 Snekkersten (DK) • GODSKESEN, -
Regulation of Sulfotransferase Enzymes by Prototypical Microsomal Enzyme Inducers in Mice
JPET Fast Forward. Published on November 9, 2007 as DOI: 10.1124/jpet.107.129650 JPET FastThis Forward.article has not Published been copyedited on and November formatted. The 9, final 2007 version as DOI:10.1124/jpet.107.129650may differ from this version. JPET # 129650 Regulation of Sulfotransferase enzymes by Prototypical Microsomal Enzyme Inducers in Mice Yazen Alnouti and Curtis D Klaassen (YA): Department of Pharmacology, Toxicology and Therapeutics, University of Kansas Downloaded from Medical Center, Kansas City, KS 66160 (CDK): Department of Pharmacology, Toxicology and Therapeutics, University of jpet.aspetjournals.org Kansas Medical Center, Kansas City, KS 66160 at ASPET Journals on October 2, 2021 1 Copyright 2007 by the American Society for Pharmacology and Experimental Therapeutics. JPET Fast Forward. Published on November 9, 2007 as DOI: 10.1124/jpet.107.129650 This article has not been copyedited and formatted. The final version may differ from this version. JPET # 129650 Short Title: Regulation of Sults Expression in Male and Female Mice Corresponding Author: Curtis Klaassen, Ph.D. Department of Pharmacology, Toxicology, and Therapeutics University of Kansas Medical Center Downloaded from 3901 Rainbow Blvd., Kansas City, KS 66160-7417, USA. Phone: (913)588-7714 jpet.aspetjournals.org Fax: (913) 588-7501; E-mail: [email protected] at ASPET Journals on October 2, 2021 Number of text pages: 23 pages Number of tables: 4 tables Number of figures: 10 figures Number of references: 59 Number of words in abstract: 235 Number of words in introduction: 685 (including references in the text) Number of words in discussion: 2671 (including references in the text) Abbreviations: Sult: Sulfotransferase, bDNA: branched DNA signal amplification assay, PAPS: 3'-phosphoadenosine 5'phosphosulfate, RLU: relative light unit(s), AhR: hydrocarbon receptor, CAR: constitutive androstane receptor, PXR: pregnane X receptor, PPARα: peroxisome proliferator activated receptor α, and Nrf2: NF-E2 related factor 2. -
Investigation of Plasma Metabolomics and Neurotransmitter Dysfunction In
RSC Advances View Article Online PAPER View Journal | View Issue Investigation of plasma metabolomics and neurotransmitter dysfunction in the process of Cite this: RSC Adv.,2019,9,18308 Alzheimer's disease rat induced by amyloid beta 25- 35 Mengying Wei,ab Yuanyuan Liu,a Zifeng Pi, b Kexin Yue,a Shizhe Li,c Mingxin Hu,a Zhiqiang Liu,b Fengrui Song b and Zhongying Liu*a Alzheimer's disease (AD) has become one of the major diseases endangering the health of the elderly. Clarifying the features of each AD animal model is valuable for understanding the onset and progression of diseases and developing potential treatments in the pharmaceutical industry. In this study, we aimed to clarify plasma metabolomics and neurotransmitter dysfunction in the process of AD model rat induced by amyloid beta 25-35 (Ab 25-35). Firstly, Morris Water Maze (MWM) test was used to investigate cognitive impairment in AD rat after 2, 4 and 8 weeks of modelling. Based on this, the effects on levels Creative Commons Attribution-NonCommercial 3.0 Unported Licence. of AD-related enzymes and eight neurotransmitters were analyzed. And plasma metabolomics analysis based on ultra high-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (UHPLC-Q-TOF-MS) was used to research the metabolic disturbances in the process of AD rat. The results shown the injury on the spatial learning ability of AD rats was gradually aggravated within 4 weeks, reached the maximum at 4 weeks and then was stable until 8 weeks. During 8 weeks of modeling, the levels of enzymes including b-secretase, g-secretase, glycogen synthase kinase-3b (GSK- 3b), acetyl cholinesterase (AchE) and nitric oxide synthase (NOS) were significant increased in the plasma of AD rats. -
Supplementary Table 3: Genes Only Influenced By
Supplementary Table 3: Genes only influenced by X10 Illumina ID Gene ID Entrez Gene Name Fold change compared to vehicle 1810058M03RIK -1.104 2210008F06RIK 1.090 2310005E10RIK -1.175 2610016F04RIK 1.081 2610029K11RIK 1.130 381484 Gm5150 predicted gene 5150 -1.230 4833425P12RIK -1.127 4933412E12RIK -1.333 6030458P06RIK -1.131 6430550H21RIK 1.073 6530401D06RIK 1.229 9030607L17RIK -1.122 A330043C08RIK 1.113 A330043L12 1.054 A530092L01RIK -1.069 A630054D14 1.072 A630097D09RIK -1.102 AA409316 FAM83H family with sequence similarity 83, member H 1.142 AAAS AAAS achalasia, adrenocortical insufficiency, alacrimia 1.144 ACADL ACADL acyl-CoA dehydrogenase, long chain -1.135 ACOT1 ACOT1 acyl-CoA thioesterase 1 -1.191 ADAMTSL5 ADAMTSL5 ADAMTS-like 5 1.210 AFG3L2 AFG3L2 AFG3 ATPase family gene 3-like 2 (S. cerevisiae) 1.212 AI256775 RFESD Rieske (Fe-S) domain containing 1.134 Lipo1 (includes AI747699 others) lipase, member O2 -1.083 AKAP8L AKAP8L A kinase (PRKA) anchor protein 8-like -1.263 AKR7A5 -1.225 AMBP AMBP alpha-1-microglobulin/bikunin precursor 1.074 ANAPC2 ANAPC2 anaphase promoting complex subunit 2 -1.134 ANKRD1 ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 1.314 APOA1 APOA1 apolipoprotein A-I -1.086 ARHGAP26 ARHGAP26 Rho GTPase activating protein 26 -1.083 ARL5A ARL5A ADP-ribosylation factor-like 5A -1.212 ARMC3 ARMC3 armadillo repeat containing 3 -1.077 ARPC5 ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -1.190 activating transcription factor 4 (tax-responsive enhancer element ATF4 ATF4 B67) 1.481 AU014645 NCBP1 nuclear cap -
(10) Patent No.: US 8119385 B2
US008119385B2 (12) United States Patent (10) Patent No.: US 8,119,385 B2 Mathur et al. (45) Date of Patent: Feb. 21, 2012 (54) NUCLEICACIDS AND PROTEINS AND (52) U.S. Cl. ........................................ 435/212:530/350 METHODS FOR MAKING AND USING THEMI (58) Field of Classification Search ........................ None (75) Inventors: Eric J. Mathur, San Diego, CA (US); See application file for complete search history. Cathy Chang, San Diego, CA (US) (56) References Cited (73) Assignee: BP Corporation North America Inc., Houston, TX (US) OTHER PUBLICATIONS c Mount, Bioinformatics, Cold Spring Harbor Press, Cold Spring Har (*) Notice: Subject to any disclaimer, the term of this bor New York, 2001, pp. 382-393.* patent is extended or adjusted under 35 Spencer et al., “Whole-Genome Sequence Variation among Multiple U.S.C. 154(b) by 689 days. Isolates of Pseudomonas aeruginosa” J. Bacteriol. (2003) 185: 1316 1325. (21) Appl. No.: 11/817,403 Database Sequence GenBank Accession No. BZ569932 Dec. 17. 1-1. 2002. (22) PCT Fled: Mar. 3, 2006 Omiecinski et al., “Epoxide Hydrolase-Polymorphism and role in (86). PCT No.: PCT/US2OO6/OOT642 toxicology” Toxicol. Lett. (2000) 1.12: 365-370. S371 (c)(1), * cited by examiner (2), (4) Date: May 7, 2008 Primary Examiner — James Martinell (87) PCT Pub. No.: WO2006/096527 (74) Attorney, Agent, or Firm — Kalim S. Fuzail PCT Pub. Date: Sep. 14, 2006 (57) ABSTRACT (65) Prior Publication Data The invention provides polypeptides, including enzymes, structural proteins and binding proteins, polynucleotides US 201O/OO11456A1 Jan. 14, 2010 encoding these polypeptides, and methods of making and using these polynucleotides and polypeptides. -
(12) United States Patent (10) Patent No.: US 7,670,797 B2 Vacanti Et Al
USOO7670797B2 (12) United States Patent (10) Patent No.: US 7,670,797 B2 Vacanti et al. (45) Date of Patent: Mar. 2, 2010 (54) METHOD OF DETERMINING TOXICITY 6,139,574. A 10/2000 Vacanti et al. WITH THREE DIMIENSIONAL STRUCTURES 6,197.575 B1* 3/2001 Griffith et al. ............ 435/288.4 (75) Inventors: Joseph P. Vacanti, Boston, MA (US); 6,287,558 B1 9, 2001 Lanza ettal. a Robert Rubin, Brookline, MA (US); 6,372.482 B1 4/2002 Mitrani et al. Wing Cheung Swampscott MA (US); 6,376, 169 B1 4/2002 Adams et al. Jeffrey T. Borenstein, Newton, MA 6,455,311 B1 9/2002 Vacanti (US) 6.479,064 B1 1 1/2002 Atala 6,525,242 B1 2/2003 Wu et al. (73) Assignees: The General Hospital Corporation, 6542.858 B1 4/2003 Grass et al. 5. R. R. The classert 6,547.994 B1 4/2003 Monkhouse et al. re ry, 2C, 6,573,063 B2 6/2003 Hochman 6,607.910 B1* 8/2003 Dimitrijevich et al. ... 435/297.1 (*) Notice: Subject to any disclaimer, the term of this 6,645,715 B1 1 1/2003 Griffith et al. patent is extended or adjusted under 35 6,647,358 B2 11/2003 Grass et al. U.S.C. 154(b) by 70 days. 2001/0041964 A1 11/2001 Grass et al. (21) Appl. No.: 11/183,115 2002fOO 10550 A1 1/2002 Grass et al. ppl. No.: 9 2002fOO 13662 A1 1/2002 Grass et al. (22)22) Filed: L. 15,9 2005 2002.0035459 A1 3/2002 Grass et al. -
Transcriptome Profiling and Molecular Pathway Analysis of Genes in Association with Salinity Adaptation in Nile Tilapia Oreochromis Niloticus
RESEARCH ARTICLE Transcriptome Profiling and Molecular Pathway Analysis of Genes in Association with Salinity Adaptation in Nile Tilapia Oreochromis niloticus Zhixin Xu1, Lei Gan1, Tongyu Li1, Chang Xu1, Ke Chen1, Xiaodan Wang1, Jian G. Qin2, Liqiao Chen1*, Erchao Li1* 1 Laboratory of Aquaculture Nutrition and Environmental Health, School of Life Sciences, East China Normal University, 500 Dongchuan Rd., Shanghai 200241, China, 2 School of Biological Sciences, Flinders University, Adelaide, SA 5001, Australia * [email protected] (EL); [email protected] (LC) Abstract Nile tilapia Oreochromis niloticus is a freshwater fish but can tolerate a wide range of salini- OPEN ACCESS ties. The mechanism of salinity adaptation at the molecular level was studied using RNA- Citation: Xu Z, Gan L, Li T, Xu C, Chen K, Wang X, Seq to explore the molecular pathways in fish exposed to 0, 8, or 16 (practical salinity unit, et al. (2015) Transcriptome Profiling and Molecular psu). Based on the change of gene expressions, the differential genes unions from freshwa- Pathway Analysis of Genes in Association with Salinity Adaptation in Nile Tilapia Oreochromis ter to saline water were classified into three categories. In the constant change category (1), niloticus. PLoS ONE 10(8): e0136506. doi:10.1371/ steroid biosynthesis, steroid hormone biosynthesis, fat digestion and absorption, comple- journal.pone.0136506 ment and coagulation cascades were significantly affected by salinity indicating the pivotal Editor: Marie-Joelle Virolle, University Paris South, roles of sterol-related pathways in response to salinity stress. In the change-then-stable cat- FRANCE egory (2), ribosomes, oxidative phosphorylation, signaling pathways for peroxisome prolif- Received: June 4, 2015 erator activated receptors, and fat digestion and absorption changed significantly with Accepted: August 4, 2015 increasing salinity, showing sensitivity to salinity variation in the environment and a responding threshold to salinity change. -
(12) Patent Application Publication (10) Pub. No.: US 2001/0034023 A1 Stanton, JR
US 2001.0034O23A1. (19) United States (12) Patent Application Publication (10) Pub. No.: US 2001/0034023 A1 Stanton, JR. et al. (43) Pub. Date: Oct. 25, 2001 (54) GENE SEQUENCE VARIATIONS WITH Related U.S. Application Data UTILITY IN DETERMINING THE (63) Continuation-in-part of application No. 09/710,467, TREATMENT OF DISEASE, INGENES filed on Nov. 8, 2000, which is a continuation-in-part RELATING TO DRUG PROCESSING of application No. 09/696,482, filed on Oct. 24, 2000. Non-provisional of provisional application No. 60/131,334, filed on Apr. 26, 1999. Non-provisional (76) Inventors: Vincent P. Stanton JR., Belmont, MA of provisional application No. 60/139,440, filed on (US); Martin Zillmann, Shrewsbury, Jun. 15, 1999. MA (US) (30) Foreign Application Priority Data Correspondence Address: Jan. 20, 2000 (WO)........................... PCT/USOO/O1392 EDWARD O. KRUESSER BROBECK PHLEGER & HARRISON Publication Classification 12390 EL CAMINO REAL (51) Int. Cl. ............................. C12O 1/68; G06F 19/00 SAN DIEGO, CA 92130 (US) (52) U.S. Cl. ................................................... 435/6; 702/20 (57) ABSTRACT (21) Appl. No.: 09/733,000 Methods for identifying and utilizing variances in genes relating to efficacy and Safety of medical therapy and other aspects of medical therapy are described, including methods (22) Filed: Dec. 7, 2000 for Selecting an effective treatment. US 2001/0034023 A1 Oct. 25, 2001 GENE SEQUENCE WARIATIONS WITH UTILITY 0005 For some drugs, over 90% of the measurable IN DETERMINING THE TREATMENT OF interSubject variation in Selected pharmacokinetic param DISEASE, INGENES RELATING TO DRUG eters has been shown to be heritable. For a limited number PROCESSING of drugs, DNA sequence variances have been identified in Specific genes that are involved in drug action or metabo RELATED APPLICATIONS lism, and these variances have been shown to account for the 0001. -
Decreased Phenol Sulfotransferase Activities Associated With
Pagan et al. Translational Psychiatry (2021) 11:23 https://doi.org/10.1038/s41398-020-01125-5 Translational Psychiatry ARTICLE Open Access Decreased phenol sulfotransferase activities associated with hyperserotonemia in autism spectrum disorders Cécile Pagan1,2,3,4,8,MarionBenabou3, Claire Leblond3, Freddy Cliquet 3, Alexandre Mathieu 3, Nathalie Lemière3, Hany Goubran-Botros3, Richard Delorme2,3,5, Marion Leboyer2,6,7, Jacques Callebert1,4, Thomas Bourgeron 2,3 and Jean-Marie Launay 1,2,4 Abstract Hyperserotonemia is the most replicated biochemical abnormality associated with autism spectrum disorders (ASD). However, previous studies of serotonin synthesis, catabolism, and transport have not elucidated the mechanisms underlying this hyperserotonemia. Here we investigated serotonin sulfation by phenol sulfotransferases (PST) in blood samples from 97 individuals with ASD and their first-degree relatives (138 parents and 56 siblings), compared with 106 controls. We report a deficient activity of both PST isoforms (M and P) in platelets from individuals with ASD (35% and 78% of patients, respectively), confirmed in autoptic tissues (9 pineal gland samples from individuals with ASD—an important source of serotonin). Platelet PST-M deficiency was strongly associated with hyperserotonemia in individuals with ASD. We then explore genetic or pharmacologic modulation of PST activities in mice: variations of PST activities were associated with marked variations of blood serotonin, demonstrating the influence of the sulfation pathway on serotonemia. We also conducted in 1645 individuals an extensive study of SULT1A genes, encoding PST and mapping 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; at highly polymorphic 16p11.2 locus, which did not reveal an association between copy number or single nucleotide variations and PST activity, blood serotonin or the risk of ASD. -
The Steroid Alcohol and Estrogen Sulfotransferases in Rodent and Human Mammary Tumors1
[CANCER RESEARCH 35,1791-1798, July 1975] The Steroid Alcohol and Estrogen Sulfotransferases in Rodent and Human Mammary Tumors1 Viviane C. Godefroi, Elizabeth R. Locke,2 Dharm V. Singh,3 and S. C. Brooks Michigan Cancer Foundation (V. C. G., E. R. L.. D. V. S.. S. C. B.} and Department of Biochemistry, Wayne State University School of Medicine (S C a.], Detroit. Michigan 48201 SUMMARY products as intermediates (21, 23). Several studies also indicate that sulfate conjugation may play an essential role Rodent and human mammary tumor systems were in the metabolism of estrogens, particularly in hepatic tissue investigated to relate the steroid alcohol and estrogen (7, 10, 27). Furthermore, it has been demonstrated that sulfotransferase activities to the hormonal dependency of breast carcinoma, unlike normal breast tissue, is active in the tumor as determined by estrogen receptor content. sulfating 3j8-hydroxy-A5-steroids and the 3-phenolic group Unlike the normal mammary gland or the hyperplastic of estrogens (I, 12). If, in fact, sulfate conjugates are in alveolar nodule, rodent mammary neoplasms displayed volved in steroid biosynthesis and metabolism, sulfation by significant levels of these two sulfotransferases. In the breast tumor extracts may reflect the 1st stage of a meta hormone-independent mouse tumors produced from out bolic sequence leading to more profound changes in the growth lines D!, D2, and D8, high dehydroepiandrosterone steroid moiety. Indeed, Adams and Wong (3) have shown sulfotransferase activity was characteristic of the rapidity breast carcinomas to exhibit a "paraendocrine" behavior with which hyperplastic alveolar nodules developed into a that is normally confined to endocrine glands in their neoplasm (Vmax = 52.8 versus 1.8 fmoles/min/mg protein) capacity to produce changes in steroid structure. -
Glyphosate's Suppression of Cytochrome P450 Enzymes
Entropy 2013, 15, 1416-1463; doi:10.3390/e15041416 OPEN ACCESS entropy ISSN 1099-4300 www.mdpi.com/journal/entropy Review Glyphosate’s Suppression of Cytochrome P450 Enzymes and Amino Acid Biosynthesis by the Gut Microbiome: Pathways to Modern Diseases Anthony Samsel 1 and Stephanie Seneff 2,* 1 Independent Scientist and Consultant, Deerfield, NH 03037, USA; E-Mail: [email protected] 2 Computer Science and Artificial Intelligence Laboratory, MIT, Cambridge, MA 02139, USA * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-617-253-0451; Fax: +1-617-258-8642. Received: 15 January 2013; in revised form: 10 April 2013 / Accepted: 10 April 2013 / Published: 18 April 2013 Abstract: Glyphosate, the active ingredient in Roundup®, is the most popular herbicide used worldwide. The industry asserts it is minimally toxic to humans, but here we argue otherwise. Residues are found in the main foods of the Western diet, comprised primarily of sugar, corn, soy and wheat. Glyphosate's inhibition of cytochrome P450 (CYP) enzymes is an overlooked component of its toxicity to mammals. CYP enzymes play crucial roles in biology, one of which is to detoxify xenobiotics. Thus, glyphosate enhances the damaging effects of other food borne chemical residues and environmental toxins. Negative impact on the body is insidious and manifests slowly over time as inflammation damages cellular systems throughout the body. Here, we show how interference with CYP enzymes acts synergistically with disruption of the biosynthesis of aromatic amino acids by gut bacteria, as well as impairment in serum sulfate transport. Consequences are most of the diseases and conditions associated with a Western diet, which include gastrointestinal disorders, obesity, diabetes, heart disease, depression, autism, infertility, cancer and Alzheimer’s disease. -
REVIEW 5A-Reduced Glucocorticoids: a Story of Natural Selection
111 REVIEW 5a-Reduced glucocorticoids: a story of natural selection Mark Nixon, Rita Upreti and Ruth Andrew Endocrinology, Queen’s Medical Research Institute, University/British Heart Foundation Centre for Cardiovascular Science, Edinburgh EH16 4TJ, UK (Correspondence should be addressed to R Andrew; Email: [email protected]) Abstract 5a-Reduced glucocorticoids (GCs) are formed when one of recently the abilities of 5a-reduced GCs to suppress the two isozymes of 5a-reductase reduces the D4–5 double inflammation have been demonstrated in vitro and in vivo. bond in the A-ring of GCs. These steroids are largely viewed Thus, the balance of parent GC and its 5a-reduced inert, despite the acceptance that other 5a-dihydro steroids, metabolite may critically affect the profile of GR signalling. e.g. 5a-dihydrotestosterone, retain or have increased activity 5a-Reduction of GCs is up-regulated in liver in metabolic at their cognate receptors. However, recent findings suggest disease and may represent a pathway that protects from both that 5a-reduced metabolites of corticosterone have dis- GC-induced fuel dyshomeostasis and concomitant inflam- sociated actions on GC receptors (GRs) in vivo and in vitro matory insult. Therefore, 5a-reduced steroids provide hope and are thus potential candidates for safer anti-inflammatory for drug development, but may also act as biomarkers of the steroids. 5a-Dihydro- and 5a-tetrahydro-corticosterone can inflammatory status of the liver in metabolic disease. With bind with GRs, but interest in these compounds had been these proposals in mind, careful attention must be paid to the limited, since they only weakly activated metabolic gene possible adverse metabolic effects of 5a-reductase inhibitors, transcription.