TCS Tree Based on L-Fragment
TCS tree based on L-fragment Kosti village 11 nt changes 12LPN1 (IP 1) 4 nt changes TUR/18/2010 BUL/1/2010 35 nt changes (Gümüşhane) (wild boar) 09/07/2010 30/12/2010 12LPN3 (IP 4) 14 nt changes Rezovo village putative common ancestor of the Bulgarian viruses All nucleotide substitutions are unique Neighbor-joining tree based on Leader+P1 TUR36/2010 TUR18/2010 BUL 12LPN3 (Rezovo) 979 BUL 12LPN4 (Rezovo) 1000 BUL 12LPN1 (Kosti) 767 BUL 12LPN2 (Kosti) BUL/12010 (wild boar) 0.001 Conclusions • The FMD outbreaks in Kosti and Rezovo villages are unlikely to be directly linked. • Both have a common ancestor close to the virus from wild boar. • The long branches between the putative common ancestor and each of the two outbreaks examined (IP1 and IP4) suggest possible intermediate hosts (either wildlife or domesticated animals). FAO-EU FMD /EC/OIE Tripartite Group Meeting, Plovdiv, Bulgaria, 25 March,2011 Every think started from …. FAO-EU FMD /EC/OIE Tripartite Group Meeting, Plovdiv, Bulgaria, 25 March,2011 FAO-EU FMD /EC/OIE Tripartitt Group Meeting,Plovdiv, Bulgaria, 25 March,2011 One shot wild boar FAO-EU FMD /EC/OIE Tripartite Group Meeting, Plovdiv, Bulgaria, 25 March,2011 One shot wild boar FAO-EU FMD /EC/OIE Tripartite Group Meeting, Plovdiv, Bulgaria, 25 March,2011 Not FMD in wild boar FAO-EU FMD /EC/OIE Tripartite Group Meeting, Plovdiv, Bulgaria, 25 March,2011 What tests we used? Аg FMDV LFD FMFV Ag ELISA WRL FMDV Svanova One- step rRT-PCR (Reid, S. et all, 2002,) (Callahan et all., 2002) FAO-EU FMD /EC/OIE Tripartite Group Meeting,
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